Jatropha Genome Database

JcCB0125821.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0125821.10 + phase: 2 /partial
         (138 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29842.m003508 phosphatidate cytidylyltransferase, putative            234   1e-62
29640.m000412 phosphatidate cytidylyltransferase, putative            184   1e-47
30174.m008826 Phosphatidate cytidylyltransferase, putative             47   2e-06

>29842.m003508 phosphatidate cytidylyltransferase, putative
          Length = 423

 Score =  234 bits (596), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 108/119 (90%), Positives = 116/119 (97%)

Query: 20  FPWKEVSILPVQWHAMCLGLFASIIAPFGGFFASGFKRAFKVKDFGDSIPGHGGITDRMD 79
           FPWKE+SILPVQWHA+ LGLFASIIAPFGGFFASGFKRAFK+KDFGDSIPGHGGITDRMD
Sbjct: 305 FPWKEISILPVQWHALWLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMD 364

Query: 80  CQMVMAVFAYIYHQSFVVPQSISVEMILDQILTNLTFEEQHALYTKLGEIIQERLVGRS 138
           CQMVMAVFAYIYHQSFVVPQSISVEMILDQIL NLTFEEQ+ALY KLGE+++ER+VGRS
Sbjct: 365 CQMVMAVFAYIYHQSFVVPQSISVEMILDQILANLTFEEQYALYMKLGEMVRERVVGRS 423


>29640.m000412 phosphatidate cytidylyltransferase, putative
          Length = 380

 Score =  184 bits (467), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 82/90 (91%), Positives = 87/90 (96%)

Query: 20  FPWKEVSILPVQWHAMCLGLFASIIAPFGGFFASGFKRAFKVKDFGDSIPGHGGITDRMD 79
           FPWKE+SILPVQWHA+CLGLFASIIAPFGGFFASGFKRAFK+KDFGDSIPGHGG TDRMD
Sbjct: 216 FPWKEISILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMD 275

Query: 80  CQMVMAVFAYIYHQSFVVPQSISVEMILDQ 109
           CQM+MAVFAYIYHQSF+VPQ  SVEMILDQ
Sbjct: 276 CQMIMAVFAYIYHQSFIVPQDYSVEMILDQ 305


>30174.m008826 Phosphatidate cytidylyltransferase, putative
          Length = 404

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 37  LGLFASIIAPFGGFFASGFKRAFKVKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFV 96
           L  F S+   FG    S  KR   VKD G  IPGHGGI DR+D  M     AY + ++F+
Sbjct: 343 LNFFGSV---FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYMFTGALAYSFVKTFL 399