Jatropha Genome Database

JcCB0125761.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0125761.10 + phase: 0 /partial
         (209 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30075.m001157 ATP binding protein, putative                           241   1e-64

>30075.m001157 ATP binding protein, putative
          Length = 1548

 Score =  241 bits (616), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 129/265 (48%), Positives = 154/265 (58%), Gaps = 60/265 (22%)

Query: 1    MNIFVNGINLNLSSKPASADQLVAGSIILASLCAALDRIEFICEASYNLLWIQKYDIDIL 60
            +NIF++GI LNLSS PASADQLVAGSIILAS+CAA+D IEFICEASYNLL I+KY+ D +
Sbjct: 1183 INIFLDGIYLNLSSNPASADQLVAGSIILASVCAAIDHIEFICEASYNLLQIRKYENDTI 1242

Query: 61   LAALHVFAYLGGDKFFSMKEYNLTMKVLKSIIIFLEGHXXXXXXXXXXXXXXXXGMKFHP 120
            L  LHVFAYLGG KF S++EY+LTM VL+SI++FLEG                   KFHP
Sbjct: 1243 LIILHVFAYLGGKKFLSLEEYSLTMTVLRSIVVFLEGENSLVSSASSLSPSHAVRSKFHP 1302

Query: 121  CGKCPFDAVSVDMVVSELLEKFQSCALSVSMHQH---------------KDNAKQCSSHE 165
            C KCPF AVSVD+V+S LLEK   CALSV+ HQH               K+ A+Q SSHE
Sbjct: 1303 CAKCPFGAVSVDVVISLLLEKLHGCALSVTTHQHMMESANLSNSHVLCTKEYAQQSSSHE 1362

Query: 166  E---------------------------------------------DWEWTCGKIISGLP 180
            +                                              WEWTCG+II  L 
Sbjct: 1363 QIFGALDMNCGASYDKSSTHSNSVGIGSLFDLSDVLSLVELIACYMSWEWTCGRIIPVLL 1422

Query: 181  KILGRPMPDDFXXXXXXLIGQVGRY 205
            +IL RPM DDF      L+GQ+GR+
Sbjct: 1423 EILERPMVDDFAVAVVLLLGQLGRF 1447