Jatropha Genome Database

JcCB0125511.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0125511.10 - phase: 0 /pseudo
         (231 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29726.m003894 spermine synthase, putative                             411   e-115
29739.m003604 Spermidine synthase, putative                           295   1e-80
28610.m000070 spermidine synthase 1, putative                         110   4e-25
30169.m006516 spermidine synthase 1, putative                         100   8e-22
30147.m013976 spermidine synthase 1, putative                          79   2e-15

>29726.m003894 spermine synthase, putative
          Length = 336

 Score =  411 bits (1057), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 197/221 (89%), Positives = 204/221 (92%), Gaps = 6/221 (2%)

Query: 1   MGDIACSNGITNG------KCHSSPNGYRKSCWYEEEIEENLRWCFALNSILHTGASQYQ 54
           MGDIACSNGI+NG      K H SPNGYRKSCWYEEEIEENLRWCFALNSILHTG SQYQ
Sbjct: 1   MGDIACSNGISNGTNGVNGKGHPSPNGYRKSCWYEEEIEENLRWCFALNSILHTGVSQYQ 60

Query: 55  DIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHSNPKSIFIMGGGEGSTAR 114
           DIALLDTKPFGKALVIDGKLQSAEVDEFIYHE LVHPA+LHHSN K+IFIMGGGEGSTAR
Sbjct: 61  DIALLDTKPFGKALVIDGKLQSAEVDEFIYHECLVHPAILHHSNSKTIFIMGGGEGSTAR 120

Query: 115 EILRHRTVEKVVMCDIDEEVVDFCKAYLVVNREAFCDQRLEIIINDARTELQSRKECYDL 174
           EILRHRTVEKVVMCDIDEEVVDFCKAYL VNREAFCD RLEIIINDAR EL+SRKECYD+
Sbjct: 121 EILRHRTVEKVVMCDIDEEVVDFCKAYLAVNREAFCDPRLEIIINDARNELESRKECYDV 180

Query: 175 IIGDLADPIEGGPCYKLYTKSFYEFTVKPKLNEAGIFVTQV 215
           IIGDLADPIEGGPCYKLYTKSFYE TVKP+LN+ GIFVTQ 
Sbjct: 181 IIGDLADPIEGGPCYKLYTKSFYELTVKPRLNQGGIFVTQA 221


>29739.m003604 Spermidine synthase, putative
          Length = 339

 Score =  295 bits (756), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 131/190 (68%), Positives = 164/190 (86%)

Query: 25  SCWYEEEIEENLRWCFALNSILHTGASQYQDIALLDTKPFGKALVIDGKLQSAEVDEFIY 84
           S WYEE I+++L+W FALNS+LH G S++Q+IALLDTK FGK LVIDGK+QSAEVDEFIY
Sbjct: 34  SSWYEETIDDDLKWSFALNSVLHKGTSEFQEIALLDTKRFGKVLVIDGKMQSAEVDEFIY 93

Query: 85  HESLVHPALLHHSNPKSIFIMGGGEGSTAREILRHRTVEKVVMCDIDEEVVDFCKAYLVV 144
           HE L+HPALL H  P+++FIMGGGEGS ARE L+H ++EKVVMCDID+EVVDFC+ YL V
Sbjct: 94  HECLIHPALLCHPKPQNVFIMGGGEGSAAREALKHNSIEKVVMCDIDQEVVDFCRRYLTV 153

Query: 145 NREAFCDQRLEIIINDARTELQSRKECYDLIIGDLADPIEGGPCYKLYTKSFYEFTVKPK 204
           N+EAFC ++L ++I+DA+ EL+ R E +D+I+GDLADP+EGGPCY+LYTKSFYE  +KPK
Sbjct: 154 NQEAFCHKKLNLVIDDAKAELEKRNEKFDIIVGDLADPVEGGPCYQLYTKSFYEKILKPK 213

Query: 205 LNEAGIFVTQ 214
           L + GIFVTQ
Sbjct: 214 LKDNGIFVTQ 223


>28610.m000070 spermidine synthase 1, putative
          Length = 346

 Score =  110 bits (276), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 4/174 (2%)

Query: 42  LNSILHTGASQYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHSNPKS 101
           +  IL  G S YQ++ +  +  +GK LV+DG +Q  E DE  Y E + H  L    NP+ 
Sbjct: 76  VEKILFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPQK 135

Query: 102 IFIMGGGEGSTAREILRHRTVEKVVMCDIDEEVVDFCKAYLVVNREAFCDQRLEIIINDA 161
           + ++GGG+G   RE+ RH +++ + +C+ID+ V+D  K +       + D R+ + + D 
Sbjct: 136 VLVIGGGDGGVLREVARHSSIDHIDICEIDKMVIDVSKEFFPDIAVGYEDPRVTLHVGDG 195

Query: 162 RTELQ-SRKECYDLIIGDLADPIEGGPCYKLYTKSFYEFTVKPKLNEAGIFVTQ 214
              L+ S    YD II D +DPI  GP  +L+ K F+E +V   L   G+  TQ
Sbjct: 196 VAFLKNSPAGTYDAIIVDSSDPI--GPAQELFEKPFFE-SVARALRPGGVVCTQ 246


>30169.m006516 spermidine synthase 1, putative
          Length = 368

 Score =  100 bits (248), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 7/213 (3%)

Query: 3   DIACSNGITNGKCHSSPNG---YRKSCWYEEEIEENLRWCFALNSILHTGASQYQDIALL 59
           D  C + + +G    S +G     K  ++   +         + +IL+ G S+YQ+I + 
Sbjct: 43  DAKCHSTVVSGWFSESQSGSGTASKRVYFNNPMWPGEAHSLEVKNILYKGKSEYQEILVF 102

Query: 60  DTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHSNPKSIFIMGGGEGSTAREILRH 119
           ++  +GK LV+DG +Q  E DE  Y E +VH  L    +PKS+ ++GGG+G   REI RH
Sbjct: 103 ESSAYGKVLVLDGIVQLTEKDECAYQEMIVHLPLCSIPSPKSVLVVGGGDGGVLREISRH 162

Query: 120 RTVEKVVMCDIDEEVVDFCKAYLVVNREAFCDQRLEIIINDARTELQ-SRKECYDLIIGD 178
            +VE + +C+ID+ V+D CK +       F D R+ + + DA   L+ +    YD II D
Sbjct: 163 SSVELIDICEIDKMVIDVCKEFFPELYVGFEDPRVRLHVGDAVEFLRLAPVGKYDAIIVD 222

Query: 179 LADPIEGGPCYKLYTKSFYEFTVKPKLNEAGIF 211
            +DP+  GP  +L  K F++ T+   L   G+ 
Sbjct: 223 SSDPV--GPAQELVEKPFFQ-TIAKALRPGGVL 252


>30147.m013976 spermidine synthase 1, putative
          Length = 343

 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 8/177 (4%)

Query: 40  FALNSILHTGASQYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHSNP 99
           + +  +L  G S+YQD+ +  +   GK ++++G LQ  E DEF Y E L H  L    NP
Sbjct: 74  YKMEKVLFHGKSEYQDLYVFQSSAHGKIVILNGALQLTEKDEFAYQEMLTHLPLCSIPNP 133

Query: 100 KSIFIMGGGEGSTAREILRHRTVEKVVMCDIDEEVVDFCKAYLVVNREAFCDQRLEIIIN 159
           K + ++GGG+G   +EI RH +VE++ +C+ID+ V+D  K +       + D R+ + I 
Sbjct: 134 KKVLLIGGGDGGILKEISRHSSVEQIDICEIDQMVIDAYKRFFPDIAIGYKDPRVNLHIG 193

Query: 160 DARTELQSRKE-CYDLIIGDLADPIEGGPCYKLYTKSFYEFTVKPKLNEAGIFVTQV 215
           +    L+   +  YD II      ++   C ++  K F +  V+  L   G+   Q 
Sbjct: 194 NGIEFLKKVTQGTYDAII------LDAFQCVEVADKCFLQSVVR-ALRSGGVMSCQA 243