Jatropha Genome Database

JcCB0125201.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0125201.10 + phase: 1 /pseudo/partial
         (568 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29594.m000267 asparagine synthetase, putative                        1031   0.0  
28281.m000370 asparagine synthetase, putative                         900   0.0  
29844.m003331 Stem-specific protein TSJT1, putative                    54   2e-07

>29594.m000267 asparagine synthetase, putative
          Length = 591

 Score = 1031 bits (2665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/564 (87%), Positives = 515/564 (91%), Gaps = 2/564 (0%)

Query: 7   LKHRGPDWSGLYQQGDFYLAHQRLAIIDPASGDQPLFNEDKAIVVTVNGEIYNHEELRKR 66
           LKHRGPDWSGLYQ GD YLAHQRLAIIDPASGDQPL+NEDKAIVVTVNGEIYNHEELRK+
Sbjct: 28  LKHRGPDWSGLYQHGDSYLAHQRLAIIDPASGDQPLYNEDKAIVVTVNGEIYNHEELRKK 87

Query: 67  LPNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVILDTRDNSYIVARDAIGITSLYI 126
           L +HKFRTGSDCDVIAHLYEEYGE+FVDMLDGMFSFV+LDTRDNS+IVARDAIGITSLYI
Sbjct: 88  LSHHKFRTGSDCDVIAHLYEEYGEDFVDMLDGMFSFVLLDTRDNSFIVARDAIGITSLYI 147

Query: 127 GWGLDGSIWIASELKGLNDDCEHFESFPPGHLYSSKSGGLRPWYNPPWFSDVIPSTPYDP 186
           GWGLDGSIWI+SELKGLNDDCEHFE FPPGHLYSSKSGGLR WYNPPWFS+ IPSTPYDP
Sbjct: 148 GWGLDGSIWISSELKGLNDDCEHFECFPPGHLYSSKSGGLRRWYNPPWFSEAIPSTPYDP 207

Query: 187 LALRRAFENAVVKRLMTDVPFXXXXXXXXXXXXXXXITARHLAGTKAAKQWGSQLHSFCV 246
           LALRRAFENAV+KRLMTDVPF               ITARHLA TKAAKQWG+QLHSFCV
Sbjct: 208 LALRRAFENAVIKRLMTDVPFGVLLSGGLDSSLVASITARHLADTKAAKQWGAQLHSFCV 267

Query: 247 GLEGSPDLKAAKEVADYLGTVHHEFHFTVQDGIDAIEDVIYHIETYDVTTIRASTPMFLM 306
           GLEGSPDLKAAKEVADYLGTVHHEFHFTVQDGIDAIEDVIYHIETYDVTTIRASTPMFLM
Sbjct: 268 GLEGSPDLKAAKEVADYLGTVHHEFHFTVQDGIDAIEDVIYHIETYDVTTIRASTPMFLM 327

Query: 307 SRKIKALGVKMVLSGEGSDEVFGGYLYFHKAPNKEEFHRETCRKIKALHQYDCLRANKAT 366
           +RKIKALGVKMV+SGEGSDE+FGGYLYFHKAPNKEEFHRETC KIKALHQYDCLRANKAT
Sbjct: 328 ARKIKALGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKAT 387

Query: 367 SAWGLEARVPFLDKEFINVAMAIDPEWKMIKPEQGRIEKWVLRRAFDDEEQPYLPKHILY 426
           SAWGLEAR+PFLDKEFINVAMAI PE KMIKPE+GRIEKWVLRRAFDDEE PYLPKHILY
Sbjct: 388 SAWGLEARIPFLDKEFINVAMAIGPESKMIKPEEGRIEKWVLRRAFDDEEHPYLPKHILY 447

Query: 427 RQKEQFSDGVGYSWIDGLKAHAAQHVTDKMMQNAGHIFPHNTPTTKEAYYYRMIFERFFP 486
           RQKEQFSDGVGYSWIDGLKAHAA+HVTDKM+QNA HIF HNTPTTKEAYYYRMIFERFFP
Sbjct: 448 RQKEQFSDGVGYSWIDGLKAHAAEHVTDKMIQNAEHIFTHNTPTTKEAYYYRMIFERFFP 507

Query: 487 QNSARLTVPGGASVACSTAKAVEWDATWSNNLDPSGRAALGVHLXX--XXXXXXXXXXXM 544
           QNSARLTVPGGAS+ACSTAKAVEWDA WS+NLDPSGRAALGVHL               M
Sbjct: 508 QNSARLTVPGGASIACSTAKAVEWDAAWSDNLDPSGRAALGVHLSAYGKQAAAAVASAGM 567

Query: 545 VTPNIIDSIPRMMEVTAPELTILS 568
           V P IIDS+PRMMEV+ P LTI S
Sbjct: 568 VPPKIIDSMPRMMEVSPPGLTISS 591


>28281.m000370 asparagine synthetase, putative
          Length = 575

 Score =  900 bits (2325), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/523 (79%), Positives = 462/523 (88%)

Query: 7   LKHRGPDWSGLYQQGDFYLAHQRLAIIDPASGDQPLFNEDKAIVVTVNGEIYNHEELRKR 66
           L+HRGPDWSGL+     YLAHQRLAI+DP SGDQPL+NEDK +VVTVNGEIYNH++LR++
Sbjct: 28  LRHRGPDWSGLHCHEGCYLAHQRLAIVDPTSGDQPLYNEDKTVVVTVNGEIYNHKQLREK 87

Query: 67  LPNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVILDTRDNSYIVARDAIGITSLYI 126
           L  HKFRTGSDC+VI HLYEEYGENFVDMLDGMFSFV+LDTRD S+I ARDAIGIT LY+
Sbjct: 88  LKPHKFRTGSDCEVIGHLYEEYGENFVDMLDGMFSFVLLDTRDKSFIAARDAIGITPLYL 147

Query: 127 GWGLDGSIWIASELKGLNDDCEHFESFPPGHLYSSKSGGLRPWYNPPWFSDVIPSTPYDP 186
           GWGLDGS+W ASE+K L+DDCE F SFPPGHLYSSK GGLR WYNP W+S+ IPSTPYDP
Sbjct: 148 GWGLDGSVWFASEMKALSDDCERFMSFPPGHLYSSKEGGLRRWYNPSWYSEQIPSTPYDP 207

Query: 187 LALRRAFENAVVKRLMTDVPFXXXXXXXXXXXXXXXITARHLAGTKAAKQWGSQLHSFCV 246
           L LR AFE AVVKRLMTDVPF               +T RHLA ++AA+QWGSQLH+FC+
Sbjct: 208 LILREAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVTCRHLAESEAARQWGSQLHTFCI 267

Query: 247 GLEGSPDLKAAKEVADYLGTVHHEFHFTVQDGIDAIEDVIYHIETYDVTTIRASTPMFLM 306
           GL+GSPDLKAA+EVADYL T HHEFHFTVQ+GIDA+E+VIYHIETYDVTTIRASTPMFLM
Sbjct: 268 GLKGSPDLKAAREVADYLQTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLM 327

Query: 307 SRKIKALGVKMVLSGEGSDEVFGGYLYFHKAPNKEEFHRETCRKIKALHQYDCLRANKAT 366
           SRKIK+LGVKMV+SGEGSDE+FGGYLYFHKAPNKEEFH+ETCRKIKALH YDCLRANK+T
Sbjct: 328 SRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIKALHLYDCLRANKST 387

Query: 367 SAWGLEARVPFLDKEFINVAMAIDPEWKMIKPEQGRIEKWVLRRAFDDEEQPYLPKHILY 426
           SAWG+EARVPFLDKEFINVAM+IDPEWKMI+ + GRIEKWVLR AFDDE+ PYLPKHILY
Sbjct: 388 SAWGVEARVPFLDKEFINVAMSIDPEWKMIRRDLGRIEKWVLRNAFDDEKNPYLPKHILY 447

Query: 427 RQKEQFSDGVGYSWIDGLKAHAAQHVTDKMMQNAGHIFPHNTPTTKEAYYYRMIFERFFP 486
           RQKEQFSDGVGYSWIDGLK HA + VTD M+ NA  ++P NTPTTKEAYYYR IFE+FFP
Sbjct: 448 RQKEQFSDGVGYSWIDGLKDHANKQVTDAMLMNASFVYPENTPTTKEAYYYRTIFEKFFP 507

Query: 487 QNSARLTVPGGASVACSTAKAVEWDATWSNNLDPSGRAALGVH 529
           +N+AR TVPGG SVACSTAKAVEWDA WS NLDPSGRAALGVH
Sbjct: 508 KNAARSTVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGVH 550


>29844.m003331 Stem-specific protein TSJT1, putative
          Length = 236

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 1/90 (1%)

Query: 93  VDMLDGMFSFVILDTRDNSYIVARDAIGITSLYIGWGLDGSIWIASELKGLNDDC-EHFE 151
           V  L G F+F++ D   ++  VA D  G   LY G   DG +  A  ++ L   C +   
Sbjct: 125 VGHLSGSFAFIVFDNSTSTLFVASDQFGKVPLYWGITADGYVAFADNIELLKGACGKSLA 184

Query: 152 SFPPGHLYSSKSGGLRPWYNPPWFSDVIPS 181
           SFP G  YS+  G LR + NP      +P+
Sbjct: 185 SFPQGCFYSTAVGELRSFENPKHKVTAVPA 214