Jatropha Genome Database

JcCB0122521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0122521.10 - phase: 0 
         (519 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29813.m001476 conserved hypothetical protein                          489   e-138
30147.m014120 Phytochrome kinase substrate, putative                  176   3e-44

>29813.m001476 conserved hypothetical protein
          Length = 509

 Score =  489 bits (1260), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 299/509 (58%), Positives = 344/509 (67%), Gaps = 55/509 (10%)

Query: 33  YLSNAEETFVDELAESNKKLIGQALEGIHFSSSGRKKVAEDGEIGVFSAEKYFNGVIDED 92
           YL+N E           +KL GQ  +  H    GRKKV EDGEIGVFSAEKYFNG I+ED
Sbjct: 34  YLNNGEV----------RKLAGQQDQEQH-RFLGRKKV-EDGEIGVFSAEKYFNGGIEED 81

Query: 93  S-PRITKIIPRKYQQPKKEEISNDHIVPAKPAVNIQPATPKVNIQPATPSVVSESSRHSQ 151
           S PR+T IIPRKY QPKK+    D ++  KP V          +   +PS++S+SS +SQ
Sbjct: 82  STPRLTNIIPRKYNQPKKDH-EQDDLISRKPIV----------LPAGSPSIISDSSWNSQ 130

Query: 152 TALLHNFVQRKT-----SSRKAN--KSGRNFLAGLGCKCYCSDKDSIDVDDEHVGEISFK 204
           TALL N VQRKT     +S KAN   SG NFLAGLGCKC CSDKDSIDVDD HVGEISFK
Sbjct: 131 TALLQN-VQRKTVLQRKTSNKANGRSSGMNFLAGLGCKCACSDKDSIDVDDAHVGEISFK 189

Query: 205 KSPNPAALFQGKSVITKPVIKTSLDELDQTS---LSDEIHSKN------GIKKDTCXXXX 255
           +SPN + + Q K+ IT+ + KT+LD     S   LS+E   +       G+ ++ C    
Sbjct: 190 RSPNASGMLQNKA-ITEELTKTNLDPNTPRSGSLLSEESCCQGLDKLGIGMNREKCFSFP 248

Query: 256 XXXXXXXXXXXVRFQIQEKQVLKPRKSLEVFGSPVNDDKRSKSFRIERRLSMLSWDTTKN 315
                       + +++E++ L PRKSLEVFGSPV+D K+SKSFRIERRLSMLSWDTT  
Sbjct: 249 MSDHVAGNLPN-KLRLREEE-LNPRKSLEVFGSPVHD-KKSKSFRIERRLSMLSWDTT-- 303

Query: 316 PKMEEIDYSATSGGGIYNDNESDASSDLFEIESLSGKVTPYLARQKSDVTSGCVTPTTCY 375
           PKMEEI YSATS G +YNDNESDASSDLFEIESL+GKVTP+LARQ SD TSGC+TPTTCY
Sbjct: 304 PKMEEIAYSATSSGVVYNDNESDASSDLFEIESLTGKVTPFLARQGSDETSGCITPTTCY 363

Query: 376 APSEASIEWSVVTASAADFSAMSDYEEFRPPPGPLSPIKTFAINNNLNTRFLSSKEIIPT 435
           APSEASIEWSVVTASAADFS MSDYEE RP     SPIK F I     T   + KE  P 
Sbjct: 364 APSEASIEWSVVTASAADFSVMSDYEEMRPSTTAPSPIKIFPITAKSKTSG-TGKE-TPR 421

Query: 436 CRPGIFLGCNSHKAVRVAGDGY-TPNDKTNFDP---RVMHSYMPVAKCPAETKLLMGFDH 491
            RP I LGCNSHKAV++AGD Y T +DK NFDP   RV   Y+PV K P E K LMGF  
Sbjct: 422 RRPNILLGCNSHKAVKIAGDIYRTSDDKANFDPRLRRVSDLYVPVPKFPVENK-LMGFGS 480

Query: 492 RQRQHGFTS-SHSLPRSHPSQSSHLLYIQ 519
           RQ Q   +S S SLPR HP QSSHLLYIQ
Sbjct: 481 RQNQRALSSTSRSLPRLHPPQSSHLLYIQ 509


>30147.m014120 Phytochrome kinase substrate, putative
          Length = 424

 Score =  176 bits (446), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 165/469 (35%), Positives = 222/469 (47%), Gaps = 89/469 (18%)

Query: 33  YLSNAEETFVDELAESNK-----KLIGQALEGIHFSSSGRKKVAEDGEIGVFSAEKYFNG 87
           YL++A++ FV +L ES +       + Q +  I  +    K  AE+GEI VF AEKYFN 
Sbjct: 17  YLTSAQQNFVVKLTESIQFPQPDITLNQEISTIPINLE--KPKAEEGEISVFGAEKYFNM 74

Query: 88  VIDEDSPRITKIIPRKYQQPKKEEISNDHIVPAKPAVNIQPATPKVNIQPATPSVVSESS 147
            I++D        PR        + +++H +  + +V++     K  +   TPSV SESS
Sbjct: 75  RIEDDQ------TPRSIHDNGGNKFAHEHPIENR-SVDLHRMKSKGRL--GTPSVSSESS 125

Query: 148 RHSQTALLHNFVQRKTSSRKANKSGRNFLAGLGCKCYCSDKDSIDVDDEHVGEISFKKSP 207
            +SQTALL               S R  LA  G K               V E  F   P
Sbjct: 126 WNSQTALL--------------PSTRRNLAHTGQK--------------KVNERWFFPGP 157

Query: 208 NPAALFQGKSVITKPVIKTSLDELDQTSLSDEIHSKNGIKKDTCXXXXXXXXXXXXXXXV 267
             A +  G+    +P  + + D        D+  S +  KK+                 V
Sbjct: 158 QVAGMSDGRK---QPQSRLAKD--------DQFRSPSFEKKNIGPKREDYLVLPTVNSGV 206

Query: 268 R-FQIQEKQVLK-----PRKSLEVFGSPVNDDKRSKSFRIERRLSMLSWDTTKNPKMEEI 321
           +  QIQ  Q LK     PRKSLEVFGS     K   +  +ER+LS+L+WD    PK + +
Sbjct: 207 QNLQIQNLQKLKFLEEDPRKSLEVFGSHT-IKKEEIATNLERKLSVLTWDAIPFPKAQNL 265

Query: 322 DYSATSGGGIYNDNESDASSDLFEIESLSGKVTPYLARQKSDVTSGCVTPTTCYAPSEAS 381
             S ++   IY D ESD SSDLFEIE++S    P  ++Q SD  SGC+TP + Y PSE S
Sbjct: 266 P-SNSASSQIYEDGESDVSSDLFEIENISCSTQPIFSKQTSDGMSGCMTPASRYEPSETS 324

Query: 382 IEWSVVTASAADFSAMSDYEEFRPPPGPLSPIKTFAINNNLNTRFLSSKEIIPTCRPGIF 441
           IEWSVVTASAADFS +SDY+E +P                  T   S+  I    RP   
Sbjct: 325 IEWSVVTASAADFSFVSDYDERKPAD---------------RTGLTSTPRI---RRPNSL 366

Query: 442 LGCNSHKAVRVAGDGYTPNDKTNFDPRVMHSY------MPVAKCPAETK 484
           LGC +HKAV VA  GY  N+K    PR+ H +      M V K P ++K
Sbjct: 367 LGCKNHKAVEVAETGYRRNEKGK--PRLHHQHRRSLDAMQVMKLPGDSK 413