Jatropha Genome Database

JcCB0121711.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0121711.20 - phase: 0 /pseudo/partial
         (216 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29989.m000425 conserved hypothetical protein                          202   1e-52
29729.m002368 Chalcone--flavonone isomerase, putative                  56   2e-08
29739.m003633 conserved hypothetical protein                           54   6e-08

>29989.m000425 conserved hypothetical protein
          Length = 127

 Score =  202 bits (513), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 102/124 (82%), Positives = 110/124 (88%)

Query: 93  AALEKSLQIVLVRDVDGKTFWDALDDAISPRIKAPTLVDESALSAFRSVFQDRALKKGTF 152
           A+ EKSL IVLVRDVDGKTFWDALDDAISPRI+APT VDESALS FRS+FQ R LKKGTF
Sbjct: 4   ASSEKSLLIVLVRDVDGKTFWDALDDAISPRIEAPTPVDESALSTFRSIFQGRPLKKGTF 63

Query: 153 IFLTWLDPSKLLICVSSDGIPSSVDATIESANVASALFDVFFGDASVSPSLKASVTTGLA 212
           IFLTWLDPSK+LIC+SSDG+ ++VDATIES NV  ALFDVFF DA VSPSLKASV  GLA
Sbjct: 64  IFLTWLDPSKMLICISSDGMQATVDATIESTNVTFALFDVFFSDAPVSPSLKASVANGLA 123

Query: 213 TILK 216
           TILK
Sbjct: 124 TILK 127


>29729.m002368 Chalcone--flavonone isomerase, putative
          Length = 204

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 14/166 (8%)

Query: 39  GTGYREKVFAIIGVKVYAAGLYVNPSILSALDTWKGQSTAEIHGNAAFFSSIFQAALEKS 98
           G G  +     + +K  A G+Y++P I+  L  WKG+   ++  +  FF ++  A +EK 
Sbjct: 21  GHGITDIEIHFLQIKFTAIGVYLDPQIVGHLQQWKGKPGNQLAEDDDFFDALIAAPVEKL 80

Query: 99  LQIVLVRDVDGKTFWDALDDAISPRIKAPTLVDE------SALSAFRSVFQDRALKKG-- 150
           L++V+++++ G  +   L+ A+  R+     VD+       AL      FQ +  KK   
Sbjct: 81  LRVVVIKEIKGSQYGVQLESAVRDRLAE---VDKYEEEEEEALEKVTEFFQSKFFKKDSI 137

Query: 151 -TFIFLTWLDPSKLLICVSSDGIPSSVDATIESANVASALFDVFFG 195
            TF F     P+   I  S++G        +E+ NV   +   + G
Sbjct: 138 ITFHFPATSSPTA-EIVFSTEG-KEDTKLKVENGNVVEMVKKWYLG 181


>29739.m003633 conserved hypothetical protein
          Length = 428

 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 11/184 (5%)

Query: 39  GTGYRE-KVFAIIGVKVYAAGLYVNP-SILSAL-DTWKGQSTAEIHGNAAFFSSIFQAAL 95
           GTG R  K+  I  +KVYA G YV+P S+   L   +     AE++    F+  + +  +
Sbjct: 248 GTGSRTMKIIKIKSLKVYAFGFYVHPNSVCEKLGPKYASVPAAELNNCRDFYEDLLREDI 307

Query: 96  EKSLQIVL-VRDVDGKTFWDALDDAISPRI-KAPTLVDESALSAFRSVF-QDRALKKGTF 152
             ++++V+    +   T  DA + ++  R+ K     D S L  F S F +D  L  GT 
Sbjct: 308 GMTVRLVINCNGMKINTVKDAFEKSLRNRLLKTNPDTDYSCLRTFGSFFTKDIPLPAGTT 367

Query: 153 IFLTWLDPSKLLICVSSDGIPSSVDATIESANVASALFDVFFGDASVSPSLKASVTTGLA 212
           +        +L+  +  + I       + S ++  A FD++ GD  VS   K  +   +A
Sbjct: 368 VDFRRTADGQLITEIGGNQI-----GAVHSKDLCRAFFDMYIGDIPVSEQTKEEIGKNVA 422

Query: 213 TILK 216
           ++++
Sbjct: 423 SMMR 426