Jatropha Genome Database

JcCB0121691.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0121691.10 + phase: 2 /pseudo
         (489 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29822.m003326 l-aspartate oxidase, putative                           876   0.0  
29651.m000291 succinate dehydrogenase, putative                       218   6e-57
34898.m000025 l-aspartate oxidase, putative                            94   2e-19

>29822.m003326 l-aspartate oxidase, putative
          Length = 655

 Score =  876 bits (2264), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/481 (88%), Positives = 452/481 (93%)

Query: 9   SRSHGVSKILQIQKCNCSQFTIGEHWRSLRMRPVSVSSCLRDGSTRYFDFVVIGSGVAGL 68
           S S GVSKI QIQ  N  Q TIG+H +S+  R +++SSCLRD ST+YFDFVVIGSGVAGL
Sbjct: 44  SWSCGVSKIFQIQNYNIPQSTIGKHCKSIGTRRINISSCLRDESTKYFDFVVIGSGVAGL 103

Query: 69  RYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPLDSVESHMQDTIVAGANLCDEE 128
           RYALEVA+HGTVAVITKAEPHESNTNYAQGGVSAVLCPLDSVESHMQDTIVAGA LCDEE
Sbjct: 104 RYALEVAEHGTVAVITKAEPHESNTNYAQGGVSAVLCPLDSVESHMQDTIVAGAYLCDEE 163

Query: 129 TVRVVCTEGPDRIRELIAMGAMFDHGEDGNLHLAREGGHSHHRIVHAADMTGREIERALL 188
           TVR+VCTEGPDRIRELI+MG  FDHGEDGNLHLAREGGHSHHRIVHAADMTGREIERALL
Sbjct: 164 TVRIVCTEGPDRIRELISMGVTFDHGEDGNLHLAREGGHSHHRIVHAADMTGREIERALL 223

Query: 189 EAVVNDPKISMFEHHFAIDLLTSQDGLNTVCHGVDTINTESKEVVRFISKVTLLAAGGAG 248
           EAV NDP I+MFEH FAIDLLTSQDG +TVCHGVDTINTE++EVVRFISKVTLLA+GGAG
Sbjct: 224 EAVDNDPNITMFEHQFAIDLLTSQDGPDTVCHGVDTINTETEEVVRFISKVTLLASGGAG 283

Query: 249 HIYPSTTNPLVATGDGIAMAHRAQAVISNMEFVQFHPTALADEGLPIKPNKTRENAFLIT 308
           HIYP+TTNP VATGDGIAMAHRAQAVISNMEFVQFHPTALADEGLPI+P+K RENAFLIT
Sbjct: 284 HIYPTTTNPPVATGDGIAMAHRAQAVISNMEFVQFHPTALADEGLPIQPSKARENAFLIT 343

Query: 309 EAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHRPRG 368
           EAVRGDGG+LYNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISH+PR 
Sbjct: 344 EAVRGDGGVLYNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPRE 403

Query: 369 KILSHFPNIAAECLKYGLDITHQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACT 428
           KILSHFPNIAAECLKYGLDIT QPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACT
Sbjct: 404 KILSHFPNIAAECLKYGLDITLQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACT 463

Query: 429 GLHGANRLASNSLLEALVFARRAVQPSIDHMKSSRLNLSASDCWARPVVPYSLGRNVMDN 488
           GLHGANRLASNSLLEALVFARRAV+PSIDHM SS+L+LSAS+ WARPV+P SL  +V+D+
Sbjct: 464 GLHGANRLASNSLLEALVFARRAVEPSIDHMMSSKLDLSASNWWARPVMPSSLRSSVIDD 523

Query: 489 I 489
           I
Sbjct: 524 I 524


>29651.m000291 succinate dehydrogenase, putative
          Length = 622

 Score =  218 bits (554), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 148/404 (36%), Positives = 205/404 (50%), Gaps = 44/404 (10%)

Query: 74  VAKHG-TVAVITKAEPHESNTNYAQGGVSAVLCPL--DSVESHMQDTIVAGANLCDEETV 130
           +++HG   A ITK  P  S+T  AQGG++A L  +  D    HM DT+     L D++ +
Sbjct: 56  LSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAI 115

Query: 131 RVVCTEGPDRIRELIAMGAMFDHGEDGNLHLAREGGHS--------HHRIVHAADMTGRE 182
           + +C E P  + EL   G  F   EDG ++    GG S         +R   AAD TG  
Sbjct: 116 QYMCREAPKAVIELENYGLPFSRTEDGRIYQRAFGGQSLDFGKGGQAYRCACAADRTGHA 175

Query: 183 IERALLEAVVNDPKISMFEHHFAIDLLTSQDGLNTVCHGVDTINTESKEVVRFISKVTLL 242
           +   L    +       F  +FA+DLL + DG    C GV  +N E   + RF +  T+L
Sbjct: 176 LLHTLYGQAMKH-NTQFFVEYFALDLLMNSDG---SCQGVIAMNMEDGTLHRFRAASTIL 231

Query: 243 AAGGAGHIYPSTTNPLVATGDGIAMAHRAQAVISNMEFVQFHPTALADEGLPIKPNKTRE 302
           A GG G  Y S T+    TGDG AM  RA   + ++EFVQFHPT +   G          
Sbjct: 232 ATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGC--------- 282

Query: 303 NAFLITEAVRGDGGILYNLGMERFMPLYDERA-ELAPRDVVARSIDDQLKKRN-----EK 356
              LITE  RG+GGIL N   ERFM  Y   A +LA RDVV+RS+  ++++       + 
Sbjct: 283 ---LITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKD 339

Query: 357 YVLLDISHRPRGKILSHFPNIAAECLKY-GLDITHQPIPVVPAAHYMCGGVRAGLQGE-- 413
           ++ L ++H P   +    P I+     + G+D+T +PIPV+P  HY  GG+     GE  
Sbjct: 340 HIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVV 399

Query: 414 --------TNVRGLYVAGEVACTGLHGANRLASNSLLEALVFAR 449
                   + V GL  AGE AC  +HGANRL +NSLL+ +VF R
Sbjct: 400 TVKGNDPDSVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGR 443


>34898.m000025 l-aspartate oxidase, putative
          Length = 224

 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/82 (59%), Positives = 56/82 (68%)

Query: 372 SHFPNIAAECLKYGLDITHQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLH 431
           S FP IA  C + G++   QPIPV PA HY  GGV   L G ++V GL+VAGE A TGLH
Sbjct: 21  SRFPVIAELCQEAGVNPGLQPIPVRPAVHYHMGGVATDLDGRSSVPGLWVAGEAASTGLH 80

Query: 432 GANRLASNSLLEALVFARRAVQ 453
           GANRLASNSLLEA V   RA +
Sbjct: 81  GANRLASNSLLEAAVMGMRAAR 102