Jatropha Genome Database
- JcCB0121611.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0121611.20 - phase: 1 /partial
(356 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30032.m000454 pentatricopeptide repeat-containing protein, putative 409 e-114
29844.m003176 pentatricopeptide repeat-containing protein, putative 324 3e-89
28124.m000243 pentatricopeptide repeat-containing protein, putative 320 6e-88
29807.m000488 pentatricopeptide repeat-containing protein, putative 305 2e-83
30147.m014323 pentatricopeptide repeat-containing protein, putative 281 2e-76
30063.m001440 pentatricopeptide repeat-containing protein, putative 278 3e-75
29769.m000464 pentatricopeptide repeat-containing protein, putative 275 2e-74
29794.m003470 pentatricopeptide repeat-containing protein, putative 275 2e-74
28842.m000915 pentatricopeptide repeat-containing protein, putative 274 4e-74
28629.m000562 Bipolar kinesin KRP-130, putative 270 1e-72
29756.m000514 pentatricopeptide repeat-containing protein, putative 267 4e-72
29635.m000449 pentatricopeptide repeat-containing protein, putative 266 9e-72
30174.m009054 pentatricopeptide repeat-containing protein, putative 258 4e-69
29628.m000759 pentatricopeptide repeat-containing protein, putative 255 2e-68
29751.m001897 pentatricopeptide repeat-containing protein, putative 255 3e-68
28350.m000103 pentatricopeptide repeat-containing protein, putative 254 4e-68
30147.m014388 pentatricopeptide repeat-containing protein, putative 254 5e-68
30170.m014308 pentatricopeptide repeat-containing protein, putative 253 9e-68
29883.m001962 pentatricopeptide repeat-containing protein, putative 252 2e-67
28357.m000095 pentatricopeptide repeat-containing protein, putative 249 2e-66
28657.m000400 pentatricopeptide repeat-containing protein, putative 248 2e-66
29729.m002326 pentatricopeptide repeat-containing protein, putative 248 3e-66
30204.m001733 pentatricopeptide repeat-containing protein, putative 248 4e-66
29822.m003454 pentatricopeptide repeat-containing protein, putative 246 1e-65
29933.m001406 pentatricopeptide repeat-containing protein, putative 246 1e-65
29869.m001143 pentatricopeptide repeat-containing protein, putative 245 2e-65
29900.m001587 pentatricopeptide repeat-containing protein, putative 244 4e-65
29726.m003908 pentatricopeptide repeat-containing protein, putative 243 1e-64
29724.m000842 pentatricopeptide repeat-containing protein, putative 243 1e-64
29648.m001935 pentatricopeptide repeat-containing protein, putative 241 4e-64
30169.m006317 pentatricopeptide repeat-containing protein, putative 241 4e-64
30131.m006909 pentatricopeptide repeat-containing protein, putative 241 4e-64
28637.m000207 pentatricopeptide repeat-containing protein, putative 241 5e-64
29950.m001169 pentatricopeptide repeat-containing protein, putative 240 7e-64
27828.m000099 pentatricopeptide repeat-containing protein, putative 237 8e-63
30147.m013942 pentatricopeptide repeat-containing protein, putative 235 2e-62
28098.m000126 pentatricopeptide repeat-containing protein, putative 234 3e-62
29785.m000950 pentatricopeptide repeat-containing protein, putative 234 4e-62
28694.m000666 pentatricopeptide repeat-containing protein, putative 234 5e-62
29805.m001517 pentatricopeptide repeat-containing protein, putative 234 7e-62
29729.m002372 pentatricopeptide repeat-containing protein, putative 233 1e-61
30169.m006555 pentatricopeptide repeat-containing protein, putative 233 1e-61
29938.m000602 pentatricopeptide repeat-containing protein, putative 232 2e-61
30010.m000680 pentatricopeptide repeat-containing protein, putative 230 9e-61
30075.m001161 pentatricopeptide repeat-containing protein, putative 225 3e-59
29726.m003970 pentatricopeptide repeat-containing protein, putative 224 3e-59
30074.m001416 pentatricopeptide repeat-containing protein, putative 224 7e-59
29848.m004527 pentatricopeptide repeat-containing protein, putative 223 9e-59
30174.m009150 pentatricopeptide repeat-containing protein, putative 223 1e-58
30115.m001175 pentatricopeptide repeat-containing protein, putative 222 2e-58
30128.m009048 pentatricopeptide repeat-containing protein, putative 221 3e-58
29628.m000765 pentatricopeptide repeat-containing protein, putative 219 1e-57
30131.m006928 pentatricopeptide repeat-containing protein, putative 218 5e-57
30174.m009061 pentatricopeptide repeat-containing protein, putative 215 3e-56
29805.m001519 pentatricopeptide repeat-containing protein, putative 214 6e-56
29799.m000650 pentatricopeptide repeat-containing protein, putative 213 8e-56
29093.m000079 pentatricopeptide repeat-containing protein, putative 212 2e-55
27810.m000635 DNA-damage-inducible protein f, putative 212 2e-55
30170.m013878 pentatricopeptide repeat-containing protein, putative 212 2e-55
30174.m008766 pentatricopeptide repeat-containing protein, putative 212 2e-55
30174.m008625 pentatricopeptide repeat-containing protein, putative 210 8e-55
29869.m001155 pentatricopeptide repeat-containing protein, putative 209 1e-54
30128.m008775 pentatricopeptide repeat-containing protein, putative 209 1e-54
29681.m001332 pentatricopeptide repeat-containing protein, putative 208 4e-54
29830.m001392 pentatricopeptide repeat-containing protein, putative 207 4e-54
29598.m000467 pentatricopeptide repeat-containing protein, putative 207 9e-54
30131.m007153 pentatricopeptide repeat-containing protein, putative 206 2e-53
29635.m000454 pentatricopeptide repeat-containing protein, putative 204 5e-53
29736.m002020 pentatricopeptide repeat-containing protein, putative 202 2e-52
28619.m000046 pentatricopeptide repeat-containing protein, putative 199 1e-51
27660.m000082 pentatricopeptide repeat-containing protein, putative 199 1e-51
29584.m000246 basic helix-loop-helix-containingprotein, putative 199 2e-51
48562.m000006 pentatricopeptide repeat-containing protein, putative 198 2e-51
29676.m001663 pentatricopeptide repeat-containing protein, putative 196 2e-50
29596.m000694 pentatricopeptide repeat-containing protein, putative 192 2e-49
29726.m004020 pentatricopeptide repeat-containing protein, putative 191 4e-49
29841.m002890 pentatricopeptide repeat-containing protein, putative 191 5e-49
29333.m001091 transferase, transferring glycosyl groups, putative 191 6e-49
30146.m003515 pentatricopeptide repeat-containing protein, putative 188 3e-48
28649.m000213 pentatricopeptide repeat-containing protein, putative 187 8e-48
28838.m000257 Cell division protein ftsH, putative 186 2e-47
29761.m000423 pentatricopeptide repeat-containing protein, putative 186 2e-47
28256.m000142 pentatricopeptide repeat-containing protein, putative 184 6e-47
30174.m009141 pentatricopeptide repeat-containing protein, putative 182 2e-46
29970.m001006 pentatricopeptide repeat-containing protein, putative 182 3e-46
30055.m001631 pentatricopeptide repeat-containing protein, putative 181 6e-46
29813.m001493 pentatricopeptide repeat-containing protein, putative 180 1e-45
29648.m001934 pentatricopeptide repeat-containing protein, putative 179 2e-45
29597.m000283 pentatricopeptide repeat-containing protein, putative 179 2e-45
29751.m001893 pentatricopeptide repeat-containing protein, putative 179 2e-45
30063.m001410 pentatricopeptide repeat-containing protein, putative 178 3e-45
28193.m000297 pentatricopeptide repeat-containing protein, putative 178 4e-45
29676.m001697 pentatricopeptide repeat-containing protein, putative 177 5e-45
29811.m000535 pentatricopeptide repeat-containing protein, putative 176 1e-44
27446.m000498 pentatricopeptide repeat-containing protein, putative 175 4e-44
30170.m014235 pentatricopeptide repeat-containing protein, putative 174 6e-44
30169.m006579 pentatricopeptide repeat-containing protein, putative 173 1e-43
29830.m001393 pentatricopeptide repeat-containing protein, putative 173 1e-43
29632.m000078 pentatricopeptide repeat-containing protein, putative 172 2e-43
30128.m008920 pentatricopeptide repeat-containing protein, putative 171 3e-43
30055.m001630 pentatricopeptide repeat-containing protein, putative 170 9e-43
30147.m014128 pentatricopeptide repeat-containing protein, putative 169 2e-42
30174.m008876 pentatricopeptide repeat-containing protein, putative 169 2e-42
29841.m002889 pentatricopeptide repeat-containing protein, putative 169 2e-42
30174.m008866 pentatricopeptide repeat-containing protein, putative 169 3e-42
28320.m001094 pentatricopeptide repeat-containing protein, putative 168 3e-42
29844.m003243 pentatricopeptide repeat-containing protein, putative 168 4e-42
28672.m000057 pentatricopeptide repeat-containing protein, putative 167 1e-41
29646.m001096 pentatricopeptide repeat-containing protein, putative 166 1e-41
30138.m004037 pentatricopeptide repeat-containing protein, putative 166 1e-41
29986.m001622 magnesium/proton exchanger, putative 166 1e-41
27985.m000891 pentatricopeptide repeat-containing protein, putative 166 2e-41
30178.m000869 pentatricopeptide repeat-containing protein, putative 166 2e-41
28097.m000054 pentatricopeptide repeat-containing protein, putative 164 8e-41
29848.m004644 pentatricopeptide repeat-containing protein, putative 162 2e-40
29742.m001368 pentatricopeptide repeat-containing protein, putative 162 2e-40
29904.m002919 pentatricopeptide repeat-containing protein, putative 162 2e-40
29820.m001036 pentatricopeptide repeat-containing protein, putative 161 6e-40
29482.m000172 pentatricopeptide repeat-containing protein, putative 158 3e-39
30147.m014156 pentatricopeptide repeat-containing protein, putative 158 4e-39
29983.m003289 pentatricopeptide repeat-containing protein, putative 158 5e-39
29844.m003191 pentatricopeptide repeat-containing protein, putative 157 1e-38
29992.m001416 pentatricopeptide repeat-containing protein, putative 156 1e-38
30147.m014385 pentatricopeptide repeat-containing protein, putative 156 2e-38
30147.m014093 pentatricopeptide repeat-containing protein, putative 153 1e-37
30128.m008933 pentatricopeptide repeat-containing protein, putative 153 1e-37
29851.m002415 pentatricopeptide repeat-containing protein, putative 153 2e-37
30128.m008954 pentatricopeptide repeat-containing protein, putative 151 4e-37
29681.m001372 pentatricopeptide repeat-containing protein, putative 151 4e-37
28629.m000556 pentatricopeptide repeat-containing protein, putative 150 1e-36
29598.m000463 pentatricopeptide repeat-containing protein, putative 149 2e-36
29761.m000430 pentatricopeptide repeat-containing protein, putative 148 3e-36
29736.m002044 pentatricopeptide repeat-containing protein, putative 148 4e-36
28470.m000433 pentatricopeptide repeat-containing protein, putative 147 5e-36
29844.m003272 pentatricopeptide repeat-containing protein, putative 147 5e-36
27837.m000163 pentatricopeptide repeat-containing protein, putative 147 6e-36
30128.m008544 pentatricopeptide repeat-containing protein, putative 147 7e-36
30008.m000805 pentatricopeptide repeat-containing protein, putative 147 7e-36
30156.m001722 pentatricopeptide repeat-containing protein, putative 146 1e-35
30174.m008973 pentatricopeptide repeat-containing protein, putative 146 1e-35
29801.m003061 pentatricopeptide repeat-containing protein, putative 145 2e-35
29854.m001091 pentatricopeptide repeat-containing protein, putative 145 4e-35
28962.m000446 pentatricopeptide repeat-containing protein, putative 144 7e-35
29676.m001642 pentatricopeptide repeat-containing protein, putative 143 1e-34
29813.m001482 pentatricopeptide repeat-containing protein, putative 142 2e-34
29950.m001146 pentatricopeptide repeat-containing protein, putative 142 2e-34
29724.m000862 pentatricopeptide repeat-containing protein, putative 142 3e-34
29631.m001012 pentatricopeptide repeat-containing protein, putative 141 4e-34
29634.m002120 pentatricopeptide repeat-containing protein, putative 140 6e-34
30204.m001799 pentatricopeptide repeat-containing protein, putative 140 8e-34
30138.m003882 pentatricopeptide repeat-containing protein, putative 140 1e-33
29889.m003395 pentatricopeptide repeat-containing protein, putative 139 2e-33
28644.m000920 pentatricopeptide repeat-containing protein, putative 139 2e-33
28644.m000922 pentatricopeptide repeat-containing protein, putative 139 2e-33
30147.m014512 pentatricopeptide repeat-containing protein, putative 139 2e-33
30147.m013753 pentatricopeptide repeat-containing protein, putative 138 3e-33
30147.m014400 pentatricopeptide repeat-containing protein, putative 138 3e-33
30147.m013867 pentatricopeptide repeat-containing protein, putative 136 1e-32
30170.m014304 pentatricopeptide repeat-containing protein, putative 136 2e-32
30147.m014125 pentatricopeptide repeat-containing protein, putative 136 2e-32
30138.m003853 pentatricopeptide repeat-containing protein, putative 135 2e-32
30190.m010934 pentatricopeptide repeat-containing protein, putative 135 2e-32
29929.m004593 pentatricopeptide repeat-containing protein, putative 135 3e-32
29615.m000493 pentatricopeptide repeat-containing protein, putative 135 3e-32
29805.m001533 pentatricopeptide repeat-containing protein, putative 135 3e-32
27732.m000283 pentatricopeptide repeat-containing protein, putative 135 3e-32
27985.m000873 pentatricopeptide repeat-containing protein, putative 135 3e-32
29757.m000711 pentatricopeptide repeat-containing protein, putative 134 5e-32
29693.m002080 pentatricopeptide repeat-containing protein, putative 134 8e-32
27996.m000150 pentatricopeptide repeat-containing protein, putative 134 9e-32
29630.m000788 pentatricopeptide repeat-containing protein, putative 134 1e-31
29769.m000453 pentatricopeptide repeat-containing protein, putative 133 1e-31
29825.m000324 pentatricopeptide repeat-containing protein, putative 133 2e-31
30131.m006999 pentatricopeptide repeat-containing protein, putative 133 2e-31
30147.m014375 pentatricopeptide repeat-containing protein, putative 132 2e-31
29751.m001864 pentatricopeptide repeat-containing protein, putative 132 2e-31
30162.m001294 pentatricopeptide repeat-containing protein, putative 132 2e-31
30138.m004070 pentatricopeptide repeat-containing protein, putative 132 2e-31
29686.m000882 pentatricopeptide repeat-containing protein, putative 132 2e-31
30147.m013888 pentatricopeptide repeat-containing protein, putative 132 3e-31
30146.m003562 pentatricopeptide repeat-containing protein, putative 131 4e-31
30059.m000463 pentatricopeptide repeat-containing protein, putative 130 7e-31
29742.m001443 pentatricopeptide repeat-containing protein, putative 130 8e-31
28196.m000203 pentatricopeptide repeat-containing protein, putative 130 9e-31
45882.m000013 pentatricopeptide repeat-containing protein, putative 130 1e-30
29912.m005398 pentatricopeptide repeat-containing protein, putative 130 1e-30
30026.m001450 pentatricopeptide repeat-containing protein, putative 130 1e-30
30190.m011319 pentatricopeptide repeat-containing protein, putative 129 2e-30
29761.m000418 pentatricopeptide repeat-containing protein, putative 129 2e-30
29904.m003059 pentatricopeptide repeat-containing protein, putative 129 3e-30
29813.m001452 pentatricopeptide repeat-containing protein, putative 129 3e-30
27810.m000670 pentatricopeptide repeat-containing protein, putative 128 5e-30
27538.m000322 pentatricopeptide repeat-containing protein, putative 128 5e-30
29953.m000441 pentatricopeptide repeat-containing protein, putative 127 6e-30
30169.m006528 pentatricopeptide repeat-containing protein, putative 126 1e-29
30174.m009151 pentatricopeptide repeat-containing protein, putative 126 2e-29
29912.m005452 pentatricopeptide repeat-containing protein, putative 125 2e-29
29801.m003193 pentatricopeptide repeat-containing protein, putative 125 3e-29
30138.m004056 pentatricopeptide repeat-containing protein, putative 124 5e-29
28448.m000361 pentatricopeptide repeat-containing protein, putative 124 7e-29
29794.m003469 pentatricopeptide repeat-containing protein, putative 124 9e-29
29685.m000500 pentatricopeptide repeat-containing protein, putative 122 2e-28
29844.m003278 pentatricopeptide repeat-containing protein, putative 122 2e-28
29841.m002773 pentatricopeptide repeat-containing protein, putative 122 2e-28
29912.m005392 pentatricopeptide repeat-containing protein, putative 122 3e-28
30131.m006988 pentatricopeptide repeat-containing protein, putative 122 3e-28
28859.m000320 pentatricopeptide repeat-containing protein, putative 121 6e-28
29765.m000741 pentatricopeptide repeat-containing protein, putative 120 8e-28
30098.m001706 pentatricopeptide repeat-containing protein, putative 120 9e-28
29739.m003641 pentatricopeptide repeat-containing protein, putative 120 1e-27
29801.m003177 pentatricopeptide repeat-containing protein, putative 119 2e-27
29981.m000602 pentatricopeptide repeat-containing protein, putative 119 2e-27
30128.m008934 pentatricopeptide repeat-containing protein, putative 119 2e-27
28196.m000208 pentatricopeptide repeat-containing protein, putative 119 3e-27
30147.m014417 pentatricopeptide repeat-containing protein, putative 117 8e-27
30128.m008587 pentatricopeptide repeat-containing protein, putative 117 8e-27
30055.m001535 pentatricopeptide repeat-containing protein, putative 117 1e-26
30068.m002662 GTP-binding protein alpha subunit, gna, putative 115 3e-26
30169.m006451 pentatricopeptide repeat-containing protein, putative 114 6e-26
29938.m000599 pentatricopeptide repeat-containing protein, putative 114 8e-26
29908.m005965 pentatricopeptide repeat-containing protein, putative 114 1e-25
29585.m000598 pentatricopeptide repeat-containing protein, putative 112 3e-25
30129.m000359 pentatricopeptide repeat-containing protein, putative 112 4e-25
29815.m000490 pentatricopeptide repeat-containing protein, putative 111 4e-25
30170.m014105 pentatricopeptide repeat-containing protein, putative 111 5e-25
29736.m002025 pentatricopeptide repeat-containing protein, putative 110 7e-25
29751.m001865 pentatricopeptide repeat-containing protein, putative 109 2e-24
29680.m001729 pentatricopeptide repeat-containing protein, putative 108 4e-24
29983.m003251 pentatricopeptide repeat-containing protein, putative 107 6e-24
29763.m000190 pentatricopeptide repeat-containing protein, putative 106 2e-23
29737.m001266 pentatricopeptide repeat-containing protein, putative 105 3e-23
29807.m000472 pentatricopeptide repeat-containing protein, putative 104 8e-23
30155.m001641 pentatricopeptide repeat-containing protein, putative 104 8e-23
30174.m008630 pentatricopeptide repeat-containing protein, putative 103 9e-23
30131.m006940 pentatricopeptide repeat-containing protein, putative 103 1e-22
30169.m006320 pentatricopeptide repeat-containing protein, putative 100 9e-22
29634.m002110 pentatricopeptide repeat-containing protein, putative 100 2e-21
30128.m008896 pentatricopeptide repeat-containing protein, putative 99 3e-21
29851.m002437 pentatricopeptide repeat-containing protein, putative 99 3e-21
29736.m002059 pentatricopeptide repeat-containing protein, putative 98 6e-21
27847.m000123 pentatricopeptide repeat-containing protein, putative 97 1e-20
30157.m000797 pentatricopeptide repeat-containing protein, putative 96 2e-20
27985.m000884 pentatricopeptide repeat-containing protein, putative 96 4e-20
30147.m014200 pentatricopeptide repeat-containing protein, putative 95 4e-20
29491.m000089 pentatricopeptide repeat-containing protein, putative 94 7e-20
29825.m000331 pentatricopeptide repeat-containing protein, putative 94 8e-20
29957.m001429 pentatricopeptide repeat-containing protein, putative 94 9e-20
30128.m008833 pentatricopeptide repeat-containing protein, putative 92 4e-19
29660.m000783 pentatricopeptide repeat-containing protein, putative 91 1e-18
29736.m002066 pentatricopeptide repeat-containing protein, putative 89 4e-18
30156.m001751 pentatricopeptide repeat-containing protein, putative 88 7e-18
29742.m001366 pentatricopeptide repeat-containing protein, putative 87 9e-18
29726.m004047 pentatricopeptide repeat-containing protein, putative 87 1e-17
27965.m000110 pentatricopeptide repeat-containing protein, putative 87 1e-17
30128.m008660 pentatricopeptide repeat-containing protein, putative 87 1e-17
28226.m000849 pentatricopeptide repeat-containing protein, putative 87 1e-17
30148.m001435 pentatricopeptide repeat-containing protein, putative 85 4e-17
29977.m000250 pentatricopeptide repeat-containing protein, putative 85 6e-17
29596.m000698 pentatricopeptide repeat-containing protein, putative 84 8e-17
30148.m001471 pentatricopeptide repeat-containing protein, putative 84 1e-16
30008.m000809 pentatricopeptide repeat-containing protein, putative 84 1e-16
29235.m000239 pentatricopeptide repeat-containing protein, putative 83 2e-16
29629.m001406 pentatricopeptide repeat-containing protein, putative 83 2e-16
29929.m004578 pentatricopeptide repeat-containing protein, putative 83 2e-16
30146.m003491 pentatricopeptide repeat-containing protein, putative 82 3e-16
30076.m004632 pentatricopeptide repeat-containing protein, putative 82 5e-16
29496.m000143 pentatricopeptide repeat-containing protein, putative 81 6e-16
29938.m000600 pentatricopeptide repeat-containing protein, putative 81 7e-16
29673.m000946 pentatricopeptide repeat-containing protein, putative 81 8e-16
29780.m001341 pentatricopeptide repeat-containing protein, putative 81 8e-16
30174.m008794 pentatricopeptide repeat-containing protein, putative 80 1e-15
29889.m003262 pentatricopeptide repeat-containing protein, putative 80 1e-15
30182.m000133 pentatricopeptide repeat-containing protein, putative 80 1e-15
29994.m000449 pentatricopeptide repeat-containing protein, putative 80 2e-15
29841.m002860 pentatricopeptide repeat-containing protein, putative 79 3e-15
27516.m000172 pentatricopeptide repeat-containing protein, putative 79 3e-15
30006.m000285 pentatricopeptide repeat-containing protein, putative 79 3e-15
29848.m004530 pentatricopeptide repeat-containing protein, putative 79 3e-15
30008.m000823 pentatricopeptide repeat-containing protein, putative 79 4e-15
29811.m000547 pentatricopeptide repeat-containing protein, putative 79 4e-15
29842.m003590 pentatricopeptide repeat-containing protein, putative 79 4e-15
29597.m000286 pentatricopeptide repeat-containing protein, putative 78 5e-15
30138.m003894 pentatricopeptide repeat-containing protein, putative 78 5e-15
30155.m001644 pentatricopeptide repeat-containing protein, putative 77 1e-14
29092.m000445 pentatricopeptide repeat-containing protein, putative 77 1e-14
30170.m013985 pentatricopeptide repeat-containing protein, putative 77 1e-14
29889.m003339 pentatricopeptide repeat-containing protein, putative 77 1e-14
29983.m003250 pentatricopeptide repeat-containing protein, putative 76 2e-14
29883.m002012 pentatricopeptide repeat-containing protein, putative 76 2e-14
29851.m002482 pentatricopeptide repeat-containing protein, putative 76 2e-14
28320.m001118 pentatricopeptide repeat-containing protein, putative 76 2e-14
29691.m000280 pentatricopeptide repeat-containing protein, putative 76 2e-14
29806.m000934 pentatricopeptide repeat-containing protein, putative 76 2e-14
28859.m000329 pentatricopeptide repeat-containing protein, putative 75 5e-14
29709.m001194 pentatricopeptide repeat-containing protein, putative 75 6e-14
29872.m000549 pentatricopeptide repeat-containing protein, putative 75 7e-14
29848.m004666 pentatricopeptide repeat-containing protein, putative 74 1e-13
27904.m000215 pentatricopeptide repeat-containing protein, putative 74 1e-13
30024.m001738 pentatricopeptide repeat-containing protein, putative 73 2e-13
29827.m002618 pentatricopeptide repeat-containing protein, putative 73 2e-13
30161.m000099 pentatricopeptide repeat-containing protein, putative 73 2e-13
29801.m003071 pentatricopeptide repeat-containing protein, putative 72 3e-13
30170.m014350 pentatricopeptide repeat-containing protein, putative 72 3e-13
29801.m003222 pentatricopeptide repeat-containing protein, putative 72 4e-13
30147.m014056 pentatricopeptide repeat-containing protein, putative 72 4e-13
29636.m000746 pentatricopeptide repeat-containing protein, putative 72 4e-13
30147.m014027 pentatricopeptide repeat-containing protein, putative 72 5e-13
30138.m004047 pentatricopeptide repeat-containing protein, putative 72 6e-13
29841.m002834 pentatricopeptide repeat-containing protein, putative 71 7e-13
29623.m000323 pentatricopeptide repeat-containing protein, putative 71 8e-13
29901.m000417 pentatricopeptide repeat-containing protein, putative 71 9e-13
29852.m001986 pentatricopeptide repeat-containing protein, putative 71 9e-13
30006.m000281 pentatricopeptide repeat-containing protein, putative 70 1e-12
29923.m000800 pentatricopeptide repeat-containing protein, putative 70 2e-12
29680.m001697 pentatricopeptide repeat-containing protein, putative 70 2e-12
29792.m000620 pentatricopeptide repeat-containing protein, putative 69 4e-12
30073.m002218 pentatricopeptide repeat-containing protein, putative 68 5e-12
28359.m000273 pentatricopeptide repeat-containing protein, putative 68 7e-12
29475.m000234 pentatricopeptide repeat-containing protein, putative 68 8e-12
29830.m001410 pentatricopeptide repeat-containing protein, putative 67 1e-11
29670.m000145 pentatricopeptide repeat-containing protein, putative 67 1e-11
28208.m000061 pentatricopeptide repeat-containing protein, putative 67 1e-11
29999.m000210 pentatricopeptide repeat-containing protein, putative 67 1e-11
29842.m003699 pentatricopeptide repeat-containing protein, putative 67 1e-11
27934.m000193 pentatricopeptide repeat-containing protein, putative 67 1e-11
30147.m014237 pentatricopeptide repeat-containing protein, putative 67 1e-11
30055.m001579 pentatricopeptide repeat-containing protein, putative 67 1e-11
30063.m001431 pentatricopeptide repeat-containing protein, putative 67 2e-11
28693.m000105 pentatricopeptide repeat-containing protein, putative 66 2e-11
30147.m014124 pentatricopeptide repeat-containing protein, putative 66 2e-11
28331.m000093 pentatricopeptide repeat-containing protein, putative 66 2e-11
29844.m003246 pentatricopeptide repeat-containing protein, putative 66 2e-11
30161.m000098 pentatricopeptide repeat-containing protein, putative 66 3e-11
30054.m000823 pentatricopeptide repeat-containing protein, putative 66 3e-11
29788.m000320 pentatricopeptide repeat-containing protein, putative 66 3e-11
29428.m000332 pentatricopeptide repeat-containing protein, putative 65 6e-11
30054.m000814 pentatricopeptide repeat-containing protein, putative 65 7e-11
29950.m001175 pentatricopeptide repeat-containing protein, putative 64 1e-10
29633.m000909 pentatricopeptide repeat-containing protein, putative 64 1e-10
29844.m003183 pentatricopeptide repeat-containing protein, putative 64 1e-10
29767.m000203 pentatricopeptide repeat-containing protein, putative 64 1e-10
29917.m001989 pentatricopeptide repeat-containing protein, putative 63 2e-10
29491.m000090 pentatricopeptide repeat-containing protein, putative 63 2e-10
29686.m000888 pentatricopeptide repeat-containing protein, putative 63 2e-10
30024.m001715 pentatricopeptide repeat-containing protein, putative 62 3e-10
29904.m002908 pentatricopeptide repeat-containing protein, putative 62 4e-10
30028.m000244 pentatricopeptide repeat-containing protein, putative 62 5e-10
29842.m003697 pentatricopeptide repeat-containing protein, putative 61 7e-10
30198.m000848 pentatricopeptide repeat-containing protein, putative 61 9e-10
29822.m003450 pentatricopeptide repeat-containing protein, putative 61 1e-09
30059.m000468 pentatricopeptide repeat-containing protein, putative 60 1e-09
30076.m004448 pentatricopeptide repeat-containing protein, putative 60 1e-09
29938.m000594 pentatricopeptide repeat-containing protein, putative 60 1e-09
29698.m000065 pentatricopeptide repeat-containing protein, putative 60 1e-09
28094.m000179 pentatricopeptide repeat-containing protein, putative 60 2e-09
30114.m000527 pentatricopeptide repeat-containing protein, putative 60 2e-09
29831.m000053 pentatricopeptide repeat-containing protein, putative 59 3e-09
42159.m000007 pentatricopeptide repeat-containing protein, putative 59 3e-09
29813.m001459 pentatricopeptide repeat-containing protein, putative 59 3e-09
30128.m008907 pentatricopeptide repeat-containing protein, putative 59 4e-09
30073.m002249 pentatricopeptide repeat-containing protein, putative 59 4e-09
27451.m000250 pentatricopeptide repeat-containing protein, putative 59 4e-09
30071.m000449 pentatricopeptide repeat-containing protein, putative 58 6e-09
29654.m000302 pentatricopeptide repeat-containing protein, putative 58 6e-09
30142.m000640 pentatricopeptide repeat-containing protein, putative 58 8e-09
29805.m001500 pentatricopeptide repeat-containing protein, putative 58 8e-09
30174.m008664 pentatricopeptide repeat-containing protein, putative 57 9e-09
30076.m004495 pentatricopeptide repeat-containing protein, putative 57 1e-08
30076.m004666 pentatricopeptide repeat-containing protein, putative 57 1e-08
29912.m005510 pentatricopeptide repeat-containing protein, putative 57 1e-08
34808.m000008 pentatricopeptide repeat-containing protein, putative 57 1e-08
29805.m001488 pentatricopeptide repeat-containing protein, putative 57 1e-08
29938.m000593 pentatricopeptide repeat-containing protein, putative 57 2e-08
29813.m001458 pentatricopeptide repeat-containing protein, putative 56 2e-08
29825.m000330 pentatricopeptide repeat-containing protein, putative 56 2e-08
29333.m001076 pentatricopeptide repeat-containing protein, putative 56 2e-08
29864.m001455 pentatricopeptide repeat-containing protein, putative 56 2e-08
30147.m013743 pentatricopeptide repeat-containing protein, putative 56 3e-08
29648.m001987 pentatricopeptide repeat-containing protein, putative 55 5e-08
30128.m008976 pentatricopeptide repeat-containing protein, putative 55 5e-08
30142.m000638 pentatricopeptide repeat-containing protein, putative 55 6e-08
29680.m001696 pentatricopeptide repeat-containing protein, putative 55 6e-08
30131.m006869 pentatricopeptide repeat-containing protein, putative 54 8e-08
30076.m004577 hypothetical protein 54 8e-08
29629.m001399 conserved hypothetical protein 54 9e-08
30169.m006372 pentatricopeptide repeat-containing protein, putative 54 9e-08
30073.m002219 pentatricopeptide repeat-containing protein, putative 53 2e-07
30064.m000493 pentatricopeptide repeat-containing protein, putative 53 2e-07
30170.m014058 pentatricopeptide repeat-containing protein, putative 53 2e-07
29794.m003453 pentatricopeptide repeat-containing protein, putative 53 2e-07
28401.m000075 pentatricopeptide repeat-containing protein, putative 53 2e-07
30147.m014017 pentatricopeptide repeat-containing protein, putative 52 3e-07
29726.m003999 pentatricopeptide repeat-containing protein, putative 52 3e-07
30131.m007253 pentatricopeptide repeat-containing protein, putative 52 6e-07
30076.m004603 pentatricopeptide repeat-containing protein, putative 52 6e-07
30138.m003949 pentatricopeptide repeat-containing protein, putative 51 8e-07
29633.m000933 pentatricopeptide repeat-containing protein, putative 51 9e-07
29680.m001750 pentatricopeptide repeat-containing protein, putative 50 1e-06
28196.m000212 pentatricopeptide repeat-containing protein, putative 50 1e-06
29889.m003387 pentatricopeptide repeat-containing protein, putative 50 1e-06
29830.m001458 pentatricopeptide repeat-containing protein, putative 50 1e-06
27446.m000483 pentatricopeptide repeat-containing protein, putative 50 2e-06
29830.m001402 pentatricopeptide repeat-containing protein, putative 50 2e-06
29827.m002662 pentatricopeptide repeat-containing protein, putative 49 3e-06
29630.m000783 pentatricopeptide repeat-containing protein, putative 49 3e-06
54388.m000018 pentatricopeptide repeat-containing protein, putative 49 5e-06
29848.m004452 pentatricopeptide repeat-containing protein, putative 49 5e-06
>30032.m000454 pentatricopeptide repeat-containing protein, putative
Length = 359
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 191/241 (79%), Positives = 215/241 (89%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGD 61
NA+R+F QMPERNL SWNAM+ G VK GDL+ ARKVFD+MPER+VVSFTVMIDGYAK GD
Sbjct: 96 NAERLFDQMPERNLKSWNAMIDGWVKAGDLLLARKVFDEMPERNVVSFTVMIDGYAKAGD 155
Query: 62 IASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSA 121
+ +AR LF++APKRD WS LISGYAQNG PNEA++IF ME NVKPDEYIMVSLMSA
Sbjct: 156 MTTARDLFERAPKRDVIAWSALISGYAQNGQPNEAVRIFLEMESKNVKPDEYIMVSLMSA 215
Query: 122 CSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS 181
CSQ+G+LDLA+W DCYLS+SSIDIGQTHV+AALIDMNAKCGNM+RA KLFEEMPKRDL +
Sbjct: 216 CSQLGSLDLARWADCYLSKSSIDIGQTHVIAALIDMNAKCGNMERAKKLFEEMPKRDLIT 275
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
YCSMIQGLSIHG AEQAVGLFN+MLNE LIPD AAFTV+LTACS G LV+EG+HYFETMK
Sbjct: 276 YCSMIQGLSIHGCAEQAVGLFNRMLNESLIPDEAAFTVVLTACSRGGLVDEGRHYFETMK 335
Query: 242 S 242
+
Sbjct: 336 T 336
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 145/286 (50%), Gaps = 20/286 (6%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
DV + ++D Y K +I SAR +FD+ +++ W+ ++ GY G A ++F M
Sbjct: 46 DVYVGSSLVDFYGKCKEILSARKMFDEMTQKNVVSWTAMVVGYLNVGDLGNAERLFDQMP 105
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA--ALIDMNAKCG 162
N+K +++ + G+L LA+ V ++ + +VV+ +ID AK G
Sbjct: 106 ERNLKS----WNAMIDGWVKAGDLLLARKV-------FDEMPERNVVSFTVMIDGYAKAG 154
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
+M A LFE PKRD+ ++ ++I G + +G +AV +F +M ++ + PD +++
Sbjct: 155 DMTTARDLFERAPKRDVIAWSALISGYAQNGQPNEAVRIFLEMESKNVKPDEYIMVSLMS 214
Query: 223 ACSH-GRLVEEGKHYFETMKSKYSMVPSPEHY-ACMVDLLSRSGQLKEAYELLKSMPVES 280
ACS G L + + + SK S+ H A ++D+ ++ G ++ A +L + MP +
Sbjct: 215 ACSQLGSL--DLARWADCYLSKSSIDIGQTHVIAALIDMNAKCGNMERAKKLFEEMP-KR 271
Query: 281 HASAWGALLGACKFYGEVELGEIVANRLF--ELEPENSSPYVLLSS 324
+ +++ +G E + NR+ L P+ ++ V+L++
Sbjct: 272 DLITYCSMIQGLSIHGCAEQAVGLFNRMLNESLIPDEAAFTVVLTA 317
>29844.m003176 pentatricopeptide repeat-containing protein, putative
Length = 640
Score = 324 bits (831), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 232/354 (65%), Gaps = 1/354 (0%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A+ +F MP ++ +WN M+ G K G++ A++ FD M ER+V S+ ++IDGY KVGD+
Sbjct: 249 ARNLFELMPIHDVGTWNLMISGCCKAGEMDAAKEFFDRMQERNVASWVMIIDGYIKVGDV 308
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
+AR++FD+ P+++ WS +I GYA+ G P +LK+++ + +KPDE + ++SAC
Sbjct: 309 DAARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFALGIISAC 368
Query: 123 SQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSY 182
SQ+G D A+ V C S+ VV +LIDM AKCGN++RA ++FE + ++DL Y
Sbjct: 369 SQLGVPDTAESVICDFVGPSL-FPNLQVVTSLIDMYAKCGNIERAVQVFEMVDQKDLHCY 427
Query: 183 CSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKS 242
++I + HG +E A+ LF++M + PD AF +LTAC+HG LV EG+ F M
Sbjct: 428 STVITAFANHGLSEDAISLFSEMQKANIKPDGVAFLGVLTACNHGGLVGEGRRLFRQMID 487
Query: 243 KYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGE 302
+Y + PS +HYACMVD+L R+G L+EA+ L+ SMPV +A+ WGALL AC+ + V+L E
Sbjct: 488 EYGIQPSEKHYACMVDILGRAGCLEEAHSLICSMPVAPNATVWGALLSACRVHLNVQLAE 547
Query: 303 IVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
A LF++EP NS YVLL +IYA A QW D S V+ ++E +RK G SWI
Sbjct: 548 AAATELFQIEPNNSGNYVLLFNIYADAGQWDDFSKVRAMIRENRVRKNRGSSWI 601
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 147/276 (53%), Gaps = 16/276 (5%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGD 61
+A+++F +M ER+ SWN+M+ G G + ARK+FD M ER+V+S+T MI GY K GD
Sbjct: 155 SARQMFDEMEERDAVSWNSMITGYGNNGRVDIARKLFDRMEERNVISWTSMIQGYVKAGD 214
Query: 62 IASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSA 121
+ AR LF++ P++D W V++S Y G A +F+ M + +V ++S
Sbjct: 215 LLEARVLFERMPEKDLASWKVMVSAYMSVGNLVAARNLFELMPIHDVGTWNL----MISG 270
Query: 122 CSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAA---LIDMNAKCGNMDRANKLFEEMPKRD 178
C + G +D AK D Q VA+ +ID K G++D A +F++MP+++
Sbjct: 271 CCKAGEMDAAK--------EFFDRMQERNVASWVMIIDGYIKVGDVDAARSVFDQMPEKN 322
Query: 179 LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE 238
L ++ +MI G + G+ ++ L+ +G+ PD I++ACS + + +
Sbjct: 323 LVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFALGIISACSQLGVPDTAESVIC 382
Query: 239 TMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLK 274
S+ P+ + ++D+ ++ G ++ A ++ +
Sbjct: 383 DFVGP-SLFPNLQVVTSLIDMYAKCGNIERAVQVFE 417
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 131/292 (44%), Gaps = 14/292 (4%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
Y+K G ++ A LFD+ P+ ++FLW+ LI G+ +N A F M N+ P + +
Sbjct: 46 YSKFGAVSYAHKLFDETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRENIVPLNFTI 105
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
S++ A S++G + V + + V +I++ +CG M A ++F+EM
Sbjct: 106 ASVLKAVSRLGRIKDGDLVYGLAVRCGYEFDLV-VKNVMIELFMRCGEMGSARQMFDEME 164
Query: 176 KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
+RD S+ SMI G +G + A LF++M +I ++T ++ + E +
Sbjct: 165 ERDAVSWNSMITGYGNNGRVDIARKLFDRMEERNVI----SWTSMIQGYVKAGDLLEARV 220
Query: 236 YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFY 295
FE M K + MV G L A L + MP+ W ++ C
Sbjct: 221 LFERMPEK-----DLASWKVMVSAYMSVGNLVAARNLFELMPIHD-VGTWNLMISGCCKA 274
Query: 296 GEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGL 347
GE++ + +R+ E N + +V++ Y V ++M E+ L
Sbjct: 275 GEMDAAKEFFDRMQE---RNVASWVMIIDGYIKVGDVDAARSVFDQMPEKNL 323
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 9/196 (4%)
Query: 154 LIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPD 213
L+ + +K G + A+KLF+E P+ + F + ++I G + + E A F KM E ++P
Sbjct: 42 LLRLYSKFGAVSYAHKLFDETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRENIVPL 101
Query: 214 NAAFTVILTACSH-GRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYEL 272
N +L A S GR+ + Y ++ Y ++ M++L R G++ A ++
Sbjct: 102 NFTIASVLKAVSRLGRIKDGDLVYGLAVRCGYEFDLVVKN--VMIELFMRCGEMGSARQM 159
Query: 273 LKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE-LEPENSSPYVLLSSIYAAADQ 331
M E A +W +++ G V+ +A +LF+ +E N + + Y A
Sbjct: 160 FDEME-ERDAVSWNSMITGYGNNGRVD----IARKLFDRMEERNVISWTSMIQGYVKAGD 214
Query: 332 WLDVSHVKNKMKERGL 347
L+ + +M E+ L
Sbjct: 215 LLEARVLFERMPEKDL 230
>28124.m000243 pentatricopeptide repeat-containing protein, putative
Length = 604
Score = 320 bits (820), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 160/385 (41%), Positives = 237/385 (61%), Gaps = 32/385 (8%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM--------------------- 41
A ++F++M E++L SWN+M+GGLVK GDL ARK+FD+M
Sbjct: 177 AMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAERDAVSWNTILDGYVKAGEM 236
Query: 42 ----------PERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNG 91
PER+VVS++ M+ GY K GD+ AR LFDK P ++ W+++ISG+A+ G
Sbjct: 237 SQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKG 296
Query: 92 LPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVV 151
L EA ++ ME +KPD+ ++S+++AC++ G L L K V + + I +V
Sbjct: 297 LAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASIKKIRIKCS-VNVS 355
Query: 152 AALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLI 211
AL+DM AKCG +D+A +F EM RDL S+ M+QGL++HG+ E+A+ LF+KM EG
Sbjct: 356 NALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFK 415
Query: 212 PDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYE 271
PD IL AC+H V++G YF +M+ + +VP EHY CM+DLL R G+L+EA+
Sbjct: 416 PDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMIDLLGRGGRLEEAFR 475
Query: 272 LLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQ 331
L++SMP+E + WG LLGAC+ + V L E V +RL LE + Y +LS+I+AAA
Sbjct: 476 LVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVLDRLITLEQSDPGNYSMLSNIFAAAGD 535
Query: 332 WLDVSHVKNKMKERGLRKLPGCSWI 356
W V++++ +MK G++K G S I
Sbjct: 536 WNSVANMRLQMKSTGVQKPSGASSI 560
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 113/289 (39%), Gaps = 46/289 (15%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I ++ + A +F++ + L++ LI + QN +A F M+ + D
Sbjct: 61 LISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFAD 120
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG--------- 162
+ L+ AC+ G L + + C++ + G V +LID +KCG
Sbjct: 121 NFTYPFLLKACNGKGWLPTVQMIHCHVEKYGF-FGDLFVPNSLIDSYSKCGLLGVNYAMK 179
Query: 163 ------------------------NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
++ RA KLF+EM +RD S+ +++ G G QA
Sbjct: 180 LFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAERDAVSWNTILDGYVKAGEMSQA 239
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
LF KM ++ + T++ C G + E + F+ M K + + ++
Sbjct: 240 FNLFEKMPERNVV---SWSTMVSGYCKTGDM-EMARMLFDKMPFKNLVT-----WTIIIS 290
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGAL---LGACKFYGEVELGEIV 304
+ G KEA L M G L L AC G + LG+ V
Sbjct: 291 GFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKV 339
>29807.m000488 pentatricopeptide repeat-containing protein, putative
Length = 683
Score = 305 bits (781), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 148/341 (43%), Positives = 231/341 (67%), Gaps = 4/341 (1%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
NA++ K G L AR VF++MP ++V+ +T M+ GYA G++ AR LF+ +P RD
Sbjct: 277 NALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVV 336
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
+W+ +I+GY Q +EA+ +F+ M++ VKPD++I+VSL++ C+Q G ++ KW+ ++
Sbjct: 337 IWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFI 396
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
++ I I V ALI+M AKCG +++A ++F + +D S+ S+I GL+++G +A
Sbjct: 397 DENRIPIDAV-VGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICGLAMNGKTSKA 455
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+ LF+KM G+ PD+ F +L+ACSHG LVEEG+ +F +M+ +Y + P EHY C+VD
Sbjct: 456 LELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCLVD 515
Query: 259 LLSRSGQLKEAYELLKSMPVESHASA---WGALLGACKFYGEVELGEIVANRLFELEPEN 315
LL R+G L EA EL+K +P E+ A +G+LL AC+ YG VE+GE VA +L + E +
Sbjct: 516 LLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRIYGNVEMGERVAKQLVKFESSD 575
Query: 316 SSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
SS + LL++IYA AD+W DV+ V+ KMK+ G++K PGCS I
Sbjct: 576 SSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKTPGCSSI 616
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 135/280 (48%), Gaps = 38/280 (13%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
E D +ID YA++ + LFD+ P RD W+V+ISGY + +A+ +F
Sbjct: 169 EFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCR 228
Query: 103 M-ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA-ALIDMNAK 160
M E + PDE +VS +SAC+ + L+L K + Y+ ++ T ++ AL+DM K
Sbjct: 229 MQEESGLMPDEATVVSTLSACTALKRLELGKKIHHYVRD---NVKFTPIIGNALLDMYCK 285
Query: 161 CGNMDRANKLFEEMPKRDLFSYCSMIQGLS--------------------------IHGY 194
CG + A +FEEMP +++ + +M+ G + I+GY
Sbjct: 286 CGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGY 345
Query: 195 AE-----QAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPS 249
+ +AV LF +M + PD +LT C+ +E+GK E + + +
Sbjct: 346 VQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDA 405
Query: 250 PEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
A ++++ ++ G +++A E+ + V+ AS W +++
Sbjct: 406 VVGTA-LIEMYAKCGFIEKALEIFYGLRVKDTAS-WTSII 443
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 116/255 (45%), Gaps = 9/255 (3%)
Query: 60 GDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLM 119
G++ A +F +++++I +A+ G L +F + + PD + +
Sbjct: 85 GNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVF 144
Query: 120 SACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDL 179
A +G + A+ + ++++ ++ T+V +LIDM A+ D LF+EMP RD+
Sbjct: 145 KAIGYLGEVSKAEKLRGLVTKTGLEF-DTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDV 203
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNE-GLIPDNAAFTVILTACSHGRLVEEGKHYFE 238
S+ MI G E A+ +F +M E GL+PD A L+AC+ + +E GK
Sbjct: 204 ISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHH 263
Query: 239 TMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEV 298
++ P + ++D+ + G L A + + MP + W ++ GE+
Sbjct: 264 YVRDNVKFTPIIGN--ALLDMYCKCGCLSIARAVFEEMP-SKNVICWTTMVSGYANCGEL 320
Query: 299 ELGEIVANRLFELEP 313
E A LFE P
Sbjct: 321 E----EARELFEGSP 331
>30147.m014323 pentatricopeptide repeat-containing protein, putative
Length = 641
Score = 281 bits (720), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/324 (43%), Positives = 209/324 (64%), Gaps = 1/324 (0%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N+++ + G + AR+VFD M E+++VS+ M+ GYA GD+ +A+ LF++ P R+
Sbjct: 297 NSLIDMYGRRGLVDLARRVFDRMQEKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIRNVI 356
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ +ISG AQ ++ALK+FQ M NVKPDE + S++SACS +G LD + V Y+
Sbjct: 357 SWTCMISGCAQANQCSDALKLFQEMMDANVKPDEITVSSVLSACSHLGLLDTGQTVHEYM 416
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+ I +V ALIDM KCG +D+A ++F +M K+D S+ SMI GL+++G+ +
Sbjct: 417 CRHDIK-SDVYVGNALIDMYCKCGVVDKALEVFHDMKKKDSVSWTSMILGLAVNGFVDNV 475
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
LF++ML +GL P + +F IL AC+H LV++G YFE+M+ Y + P +HY C+VD
Sbjct: 476 FELFSQMLRDGLQPTHGSFIGILLACTHAGLVDKGLEYFESMEHVYGLRPEMKHYGCVVD 535
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
LLSRSG+L AYE +K MPV W LL ACK + + L EI ++L EL+P NS
Sbjct: 536 LLSRSGELDRAYEFIKQMPVVPDVVLWRILLSACKLHRNLVLAEIATSKLLELDPSNSGN 595
Query: 319 YVLLSSIYAAADQWLDVSHVKNKM 342
YVLLS+ YA +D+W D S +++ M
Sbjct: 596 YVLLSNTYAGSDRWDDASRMRDLM 619
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 31/269 (11%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I Y G++ A+ +FDK RD W+ LI GY+Q E L +F M NV D
Sbjct: 198 LIRMYGYFGELGYAQKVFDKMDDRDLVSWNSLICGYSQCNRFKEVLDLFNLMREANVTAD 257
Query: 112 EYIMVSLMSACSQV---GNLD-LAKW-------VDCYLSQSSID---------------- 144
MV ++ ACS + G +D + K+ +D YL S ID
Sbjct: 258 SVTMVKVILACSYLCEDGVVDSMVKYIEDKHVDIDVYLGNSLIDMYGRRGLVDLARRVFD 317
Query: 145 -IGQTHVVA--ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ + ++V+ A++ A G++ A KLF EMP R++ S+ MI G + A+ L
Sbjct: 318 RMQEKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIRNVISWTCMISGCAQANQCSDALKL 377
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F +M++ + PD + +L+ACSH L++ G+ E M ++ + ++D+
Sbjct: 378 FQEMMDANVKPDEITVSSVLSACSHLGLLDTGQTVHEYM-CRHDIKSDVYVGNALIDMYC 436
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLG 290
+ G + +A E+ M + S +LG
Sbjct: 437 KCGVVDKALEVFHDMKKKDSVSWTSMILG 465
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 121/279 (43%), Gaps = 21/279 (7%)
Query: 78 FLWSVLISGYAQNGLPNEALKIFQG-MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDC 136
+++ LI G +Q+ PNEA+ ++ M + D + L ACS+V D+
Sbjct: 122 LIFNYLIRGLSQSENPNEAIVMYSDLMYNQGILGDNLTFIYLFKACSRVK--DVLHGQVF 179
Query: 137 YLSQSSIDIGQTHVVA-ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYA 195
++ + G + +LI M G + A K+F++M RDL S+ S+I G S
Sbjct: 180 HVQVLKLGFGSYLFIENSLIRMYGYFGELGYAQKVFDKMDDRDLVSWNSLICGYSQCNRF 239
Query: 196 EQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEG-----KHYFETMKSKYSMVPSP 250
++ + LFN M + D+ ++ ACS+ L E+G Y E +
Sbjct: 240 KEVLDLFNLMREANVTADSVTMVKVILACSY--LCEDGVVDSMVKYIEDKHVDIDVYLGN 297
Query: 251 EHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLF- 309
++D+ R G + A + M E + +W A+L G++ + A +LF
Sbjct: 298 S----LIDMYGRRGLVDLARRVFDRMQ-EKNIVSWNAMLTGYATAGDL----VAAKKLFN 348
Query: 310 ELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLR 348
E+ N + + S A A+Q D + +M + ++
Sbjct: 349 EMPIRNVISWTCMISGCAQANQCSDALKLFQEMMDANVK 387
>30063.m001440 pentatricopeptide repeat-containing protein, putative
Length = 615
Score = 278 bits (711), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 133/334 (39%), Positives = 205/334 (61%), Gaps = 7/334 (2%)
Query: 29 GDLINARKVFDDMPER------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
GD +K+ M DV ++D Y K G AR LF P ++ W+
Sbjct: 250 GDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNS 309
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+ISG A GL EAL +F+ M+ M +KPD +V ++++C+ +G+L+L KWV Y+ ++
Sbjct: 310 MISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNH 369
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ +V AL+DM AKCG++D+A +F+ M +D++SY +MI G ++HG A++A+ +F
Sbjct: 370 MK-ADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIF 428
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
++M G+ PD+ +L+ACSH L+EEG+ +F+ M Y + P EHY CMVDLL R
Sbjct: 429 SEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTEHYGCMVDLLGR 488
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLL 322
+G + EA MP+ AS WG+LLGACK + +VELGE V +L E+EPE Y+L+
Sbjct: 489 AGLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVELGETVIQKLIEMEPERDGAYILM 548
Query: 323 SSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
S+IY++A++W D + MK+ ++K PGCS I
Sbjct: 549 SNIYSSANRWRDALKWRKAMKQNNIKKTPGCSSI 582
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 121/236 (51%), Gaps = 5/236 (2%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
YA G I + +FD+ P D W+ LI Y++ G P+EA+ F MN D +
Sbjct: 183 YAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEAIAAFFR---MNCTADRMTL 239
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA-ALIDMNAKCGNMDRANKLFEEM 174
V ++SACSQ+G+ L K + Y+ D+ + AL+DM KCG A +LF M
Sbjct: 240 VVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLM 299
Query: 175 PKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK 234
P ++L S+ SMI GL+ G ++A+ +F +M GL PD+ +L +C++ +E GK
Sbjct: 300 PVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGK 359
Query: 235 HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLG 290
+ + K M +VD+ ++ G + +A+ + ++M + S ++G
Sbjct: 360 -WVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVG 414
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 101/244 (41%), Gaps = 40/244 (16%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFT-------- 50
A+++F MP +NL SWN+M+ GL G A +F M + D V+
Sbjct: 292 ARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCAN 351
Query: 51 ---------------------------VMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
++D YAK G I A +F +D + ++ +
Sbjct: 352 LGDLELGKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAM 411
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I G+A +G + AL IF M M V+PD +V ++SACS G L+ + +S+
Sbjct: 412 IVGFAMHGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYH 471
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQAVGLF 202
QT ++D+ + G + A +MP D + S++ IH E +
Sbjct: 472 LQPQTEHYGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVELGETVI 531
Query: 203 NKML 206
K++
Sbjct: 532 QKLI 535
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 123/290 (42%), Gaps = 13/290 (4%)
Query: 65 ARALFDKAPKRDAFLWSVLISGYA-QNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACS 123
A +L + + ++++ +I + N +++ M L+ + PD Y + L+ ACS
Sbjct: 90 ASSLANFCHQNPVYIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLLKACS 149
Query: 124 QVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYC 183
Q A + + ++ + V L+ A G ++ K+F++ P DL S+
Sbjct: 150 QSHAFIEALQIHAHSIKTGLS-SNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISWT 208
Query: 184 SMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSK 243
++IQ S GY +A+ F +M D V+L+ACS GK M
Sbjct: 209 TLIQAYSKMGYPSEAIAAFFRM---NCTADRMTLVVVLSACSQLGDFTLGKKILAYMDHH 265
Query: 244 YSMVPSPEHYA-CMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGE 302
V S ++D+ + GQ A +L MPV++ S W +++ G +
Sbjct: 266 LFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVS-WNSMISGLAHQGLFKEAL 324
Query: 303 IVANRL--FELEPENSSPYVLLSSIYAAAD----QWLDVSHVKNKMKERG 346
+ R+ L+P++ + +L+S D +W+ KN MK G
Sbjct: 325 HMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADG 374
>29769.m000464 pentatricopeptide repeat-containing protein, putative
Length = 491
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/338 (39%), Positives = 215/338 (63%), Gaps = 1/338 (0%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N +V G + +ARK+FD RDV+++T +I+GY + G + R LFDK P+R++
Sbjct: 150 NGLVHMFAIFGCMDSARKLFDLSSNRDVITWTALINGYVRAGQVLIGRELFDKMPERNSV 209
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
WS +I+GY + G EAL++F M + P+ +V ++AC+ +G LD +W+ CY+
Sbjct: 210 SWSAMITGYVRVGFFEEALELFNAMLISGFWPNHAGIVCAINACASLGALDQGRWIHCYI 269
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
++ +D+ + + AALIDM AKCG ++ A +F E+ RD+ Y +I GL+ HG + A
Sbjct: 270 KRNRMDLDRV-MGAALIDMYAKCGCIEIACSIFGELRNRDVHVYTCLISGLANHGQSATA 328
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
V LF +M +EG++P+ F +L ACS LV++G FE M Y P +HY C+VD
Sbjct: 329 VELFERMHSEGVVPNEVTFVSVLNACSRMGLVDKGLRIFENMSKIYGDEPQVQHYGCLVD 388
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
LL R+G+L+EA +L+K MP++ + GALL A + YG+VELGE L +L ++S
Sbjct: 389 LLGRAGKLEEAKKLVKEMPMKPDSYVLGALLNASRVYGDVELGEETVESLAQLSLDHSGV 448
Query: 319 YVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+V+LS++YA+A++W +V+ V+ M ++ +RK+PGCS I
Sbjct: 449 HVVLSNMYASANKWDEVARVRRGMGDKKVRKVPGCSLI 486
>29794.m003470 pentatricopeptide repeat-containing protein, putative
Length = 517
Score = 275 bits (703), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 126/343 (36%), Positives = 221/343 (64%), Gaps = 1/343 (0%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP 73
+L + NA++ K +L++A +FD+M ER +S+ +I G+ ++G + ARALFD+ P
Sbjct: 129 HLITENALIDMYTKCDNLLDAHNLFDEMHERGAISWNGIISGHVRLGQMRRARALFDEMP 188
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKW 133
R W+ +ISGY + G +AL +F+ M++ ++PDE ++S++ AC+++G L+ KW
Sbjct: 189 NRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPACAKLGALETGKW 248
Query: 134 VDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHG 193
+ + +++ + + +T + ALI+M KCG +D+A +LF++M RD+ S+ +MI GL+ HG
Sbjct: 249 IHMFCARNGL-LRRTCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWSTMIGGLANHG 307
Query: 194 YAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHY 253
+A+ +F +M + P+ F +L+AC+H EEG YF+TMK + + P EHY
Sbjct: 308 KVREAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEGLMYFDTMKKDFHIEPEIEHY 367
Query: 254 ACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEP 313
+VDLL R+G+L +A ++++ MP++ + WG+LL +C+ + +E+ I L ELEP
Sbjct: 368 GSLVDLLGRAGRLSQALDIVEKMPMKPDSKIWGSLLSSCRTHCNIEVAVIAMEHLEELEP 427
Query: 314 ENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+++ YVLLS+IYA +W DVS ++ ++ + ++K PGCS I
Sbjct: 428 DDTGNYVLLSNIYADLGKWDDVSRMRKLVRSKRMKKTPGCSLI 470
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 112/261 (42%), Gaps = 44/261 (16%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP-------ERDVVSF------ 49
A+ +F +MP R + SW A++ G + G I+A VF +M E ++S
Sbjct: 180 ARALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPACAK 239
Query: 50 --------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
+I+ Y K G I A LFD+ RD WS +
Sbjct: 240 LGALETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWSTM 299
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA-KWVDCYLSQSS 142
I G A +G EA+ IF+ M+ N+KP+ V L+SAC+ G + + D
Sbjct: 300 IGGLANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEGLMYFDTMKKDFH 359
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQAVGL 201
I+ H +L+D+ + G + +A + E+MP K D + S++ H E AV
Sbjct: 360 IEPEIEH-YGSLVDLLGRAGRLSQALDIVEKMPMKPDSKIWGSLLSSCRTHCNIEVAVIA 418
Query: 202 FNKMLNEGLIPDNAAFTVILT 222
+ E L PD+ V+L+
Sbjct: 419 MEHL--EELEPDDTGNYVLLS 437
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 141/327 (43%), Gaps = 50/327 (15%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM--ELMN 107
T MID + D+ A LF + +A+L++ +I N + + + ++ M E N
Sbjct: 24 TKMIDVCDRNEDMDYASFLFKEVIDPNAYLYNAMIRACTHNSMYSLTIDFYKQMLREYRN 83
Query: 108 -------VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA--ALIDMN 158
+ PDE+ ++ AC+++G +L K V + ++H++ ALIDM
Sbjct: 84 SQTSEDLILPDEFTFPFVVKACARLGLHNLGKQVHAQFFKFG---KKSHLITENALIDMY 140
Query: 159 AKC-------------------------------GNMDRANKLFEEMPKRDLFSYCSMIQ 187
KC G M RA LF+EMP R + S+ ++I
Sbjct: 141 TKCDNLLDAHNLFDEMHERGAISWNGIISGHVRLGQMRRARALFDEMPNRTIVSWTAIIS 200
Query: 188 GLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMV 247
G + G A+ +F +M G+ PD A+ +L AC+ +E GK + ++ ++
Sbjct: 201 GYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPACAKLGALETGK-WIHMFCARNGLL 259
Query: 248 PSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANR 307
++++ ++ G + +A +L M S W ++G +G+V + R
Sbjct: 260 RRTCICNALIEMYTKCGCIDQACQLFDQMRGRDVIS-WSTMIGGLANHGKVREAIAIFER 318
Query: 308 LFE--LEPENSSPYVLLSSIYAAADQW 332
+ + ++P N +V L S A A W
Sbjct: 319 MKQTNIKP-NGITFVGLLSACAHAGFW 344
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 14/141 (9%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDGY 56
D A ++F QM R++ SW+ M+GGL G + A +F+ M + ++ ++F ++
Sbjct: 279 DQACQLFDQMRGRDVISWSTMIGGLANHGKVREAIAIFERMKQTNIKPNGITFVGLLSAC 338
Query: 57 AKVGDIASARALFDKAPKRDAFL------WSVLISGYAQNGLPNEALKIFQGMELMNVKP 110
A G FD K+D + + L+ + G ++AL I +E M +KP
Sbjct: 339 AHAGFWEEGLMYFDTM-KKDFHIEPEIEHYGSLVDLLGRAGRLSQALDI---VEKMPMKP 394
Query: 111 DEYIMVSLMSACSQVGNLDLA 131
D I SL+S+C N+++A
Sbjct: 395 DSKIWGSLLSSCRTHCNIEVA 415
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 104/240 (43%), Gaps = 40/240 (16%)
Query: 138 LSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQ 197
LSQS+ +V +ID+ + +MD A+ LF+E+ + + Y +MI+ + +
Sbjct: 16 LSQSNF------LVTKMIDVCDRNEDMDYASFLFKEVIDPNAYLYNAMIRACTHNSMYSL 69
Query: 198 AVGLFNKMLNEG---------LIPDNAAFTVILTACSHGRLVEEGK----HYFETMKSKY 244
+ + +ML E ++PD F ++ AC+ L GK +F+ K +
Sbjct: 70 TIDFYKQMLREYRNSQTSEDLILPDEFTFPFVVKACARLGLHNLGKQVHAQFFKFGKKSH 129
Query: 245 SMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIV 304
+ + ++D+ ++ L +A+ L M E A +W ++ G V LG++
Sbjct: 130 LITENA-----LIDMYTKCDNLLDAHNLFDEMH-ERGAISWNGIIS-----GHVRLGQMR 178
Query: 305 ANR-LFELEPENS-SPYVLLSSIYAAADQWLDVSHVKNKMKERGLRK--------LPGCS 354
R LF+ P + + + S Y ++D V +M+ G+ LP C+
Sbjct: 179 RARALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPACA 238
>28842.m000915 pentatricopeptide repeat-containing protein, putative
Length = 538
Score = 274 bits (701), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 140/330 (42%), Positives = 214/330 (64%), Gaps = 11/330 (3%)
Query: 33 NARKVFDDMP--ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQN 90
+ARK+FD +P R+V + M+ YAK+ D+ +A+ LFD P+R+ W+ LISGYA
Sbjct: 162 DARKLFDGIPLTARNVALWNAMLTSYAKICDMPNAQHLFDSMPQRNLISWTALISGYAHI 221
Query: 91 GLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTH- 149
P++A+ IF+ M+L NV PDE +++++SAC+Q+G L+L +W+ Y IDI H
Sbjct: 222 NRPHQAIAIFRTMQLQNVVPDEITLLAVLSACAQLGALELGEWIRNY-----IDIHGLHR 276
Query: 150 ---VVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
+ ALIDM AK GN+ RA +FE M + + ++ +MI GL++HG QA+ +F++M
Sbjct: 277 NVPLHNALIDMYAKSGNIKRALLIFESMKHKTIVTWTTMIAGLALHGLGTQALEMFSRME 336
Query: 207 NEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQL 266
+ + P+ F +L+ACSH LV+ + +F M+S+Y++ P EHY CM+DLL R+G L
Sbjct: 337 RDRVKPNEITFIAVLSACSHVGLVQLARSFFTNMRSRYTIQPKIEHYGCMIDLLGRAGYL 396
Query: 267 KEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIY 326
+EA +LL+ MP E +A+ WG+LL A +G+ LGE L ELEP NS Y LLS+IY
Sbjct: 397 QEAQQLLQQMPFEPNAAIWGSLLAASYTHGDAMLGERTLKHLIELEPNNSGNYALLSNIY 456
Query: 327 AAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
A+ +W V+ M++RG++K+PG S+I
Sbjct: 457 ASLGRWKASRIVRKMMRDRGVKKIPGGSFI 486
>28629.m000562 Bipolar kinesin KRP-130, putative
Length = 1530
Score = 270 bits (689), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 140/396 (35%), Positives = 227/396 (57%), Gaps = 44/396 (11%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PE-----------R 44
+A +F +MP++N SW+ M+GG VK G+ + K F ++ P+ R
Sbjct: 1133 DAYALFDEMPQKNPVSWSIMIGGFVKVGEFMQCYKTFKELIRNGVQPDNYTLPFVIKACR 1192
Query: 45 DVVSF----------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
D V+ ++D YAK I A+ LFD P +D W+V
Sbjct: 1193 DTVALDMGRLIHCVVLKYGLHLDHFVCAALVDMYAKCKVIEDAKLLFDVMPSKDLVTWTV 1252
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS- 141
+I GYA+ G E+L +F + PD+ MVS+++AC+++G ++ A++V Y++++
Sbjct: 1253 MIGGYAECGNAKESLVLFDHLREEGFVPDKIAMVSIVNACAKLGAMNKARFVHEYVNRNR 1312
Query: 142 -SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
S+D+ + A+IDM AKCG++D A ++F+ M +++ S+ +MI HG ++A+
Sbjct: 1313 FSLDVI---LGTAMIDMYAKCGDVDSAREIFDNMHHKNVISWSAMIAAYGYHGQGKKALE 1369
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
LF ML+ G++P+N F +L ACSH LVE+G M + + P +H+ CMVDLL
Sbjct: 1370 LFPMMLSSGILPNNITFVSLLYACSHAGLVEDGLTLLSLMWESFGVRPDIKHHTCMVDLL 1429
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYV 320
R+GQL EA+ +++M VE W +LLGAC+ + ++L E A L EL+P+N Y+
Sbjct: 1430 GRAGQLTEAFRFIENMTVEKDEGLWSSLLGACRIHKRIDLAEKAAKSLLELQPQNPGNYI 1489
Query: 321 LLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
LLS+IYA A QW DV+ +++ M +R L+K+PG +WI
Sbjct: 1490 LLSNIYANAGQWKDVAKIRDLMTKRKLKKIPGYTWI 1525
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 128/237 (54%), Gaps = 5/237 (2%)
Query: 62 IASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSA 121
+ A ALFD+ P+++ WS++I G+ + G + K F+ + V+PD Y + ++ A
Sbjct: 1131 LTDAYALFDEMPQKNPVSWSIMIGGFVKVGEFMQCYKTFKELIRNGVQPDNYTLPFVIKA 1190
Query: 122 CSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS 181
C LD+ + + C + + + + V AAL+DM AKC ++ A LF+ MP +DL +
Sbjct: 1191 CRDTVALDMGRLIHCVVLKYGLHLDH-FVCAALVDMYAKCKVIEDAKLLFDVMPSKDLVT 1249
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM- 240
+ MI G + G A++++ LF+ + EG +PD A I+ AC+ + + + E +
Sbjct: 1250 WTVMIGGYAECGNAKESLVLFDHLREEGFVPDKIAMVSIVNACAKLGAMNKARFVHEYVN 1309
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
++++S+ M+D+ ++ G + A E+ +M + +W A++ A ++G+
Sbjct: 1310 RNRFSL--DVILGTAMIDMYAKCGDVDSAREIFDNMH-HKNVISWSAMIAAYGYHGQ 1363
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 112/265 (42%), Gaps = 48/265 (18%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER---------------- 44
++AK +F MP ++L +W M+GG + G+ + +FD + E
Sbjct: 1233 EDAKLLFDVMPSKDLVTWTVMIGGYAECGNAKESLVLFDHLREEGFVPDKIAMVSIVNAC 1292
Query: 45 -----------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
DV+ T MID YAK GD+ SAR +FD ++ WS
Sbjct: 1293 AKLGAMNKARFVHEYVNRNRFSLDVILGTAMIDMYAKCGDVDSAREIFDNMHHKNVISWS 1352
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I+ Y +G +AL++F M + P+ VSL+ ACS G ++ + + +S
Sbjct: 1353 AMIAAYGYHGQGKKALELFPMMLSSGILPNNITFVSLLYACSHAGLVEDGLTLLSLMWES 1412
Query: 142 ---SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQ 197
DI ++D+ + G + A + E M ++D + S++ IH +
Sbjct: 1413 FGVRPDIKHH---TCMVDLLGRAGQLTEAFRFIENMTVEKDEGLWSSLLGACRIHKRIDL 1469
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILT 222
A +L L P N ++L+
Sbjct: 1470 AEKAAKSLLE--LQPQNPGNYILLS 1492
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 124 QVGNLDLAKWVD--CYLSQ--SSIDIGQTHVVAALIDMNAKC-GNMDRANKL-------- 170
++ N D + ++D C +S + +I Q + ALI N+ N+ ANKL
Sbjct: 1070 KISNPDFSFFMDPNCLISTLLNCKNICQIKQLHALITTNSVLYNNLTVANKLLYVYVHHK 1129
Query: 171 --------FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
F+EMP+++ S+ MI G G Q F +++ G+ PDN ++
Sbjct: 1130 CLTDAYALFDEMPQKNPVSWSIMIGGFVKVGEFMQCYKTFKELIRNGVQPDNYTLPFVIK 1189
Query: 223 ACSHGRLVEEGKHYFETMKSKYSMVPSPEHYAC--MVDLLSRSGQLKEAYELLKSMPVES 280
AC ++ G+ + KY + +H+ C +VD+ ++ +++A L MP +
Sbjct: 1190 ACRDTVALDMGR-LIHCVVLKYGL--HLDHFVCAALVDMYAKCKVIEDAKLLFDVMPSKD 1246
Query: 281 HASAWGALLG 290
+ W ++G
Sbjct: 1247 LVT-WTVMIG 1255
>29756.m000514 pentatricopeptide repeat-containing protein, putative
Length = 602
Score = 267 bits (683), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 220/344 (63%), Gaps = 2/344 (0%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP 73
NL ++++ K ++ +AR++FD+M RDV+++T M+ GYA+ GD+ +AR LFD P
Sbjct: 217 NLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMP 276
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKW 133
+++ W+ LI+GYA++ L ++AL++F M +N++PD++ S + A + + +L+ K
Sbjct: 277 EKNPVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQ 336
Query: 134 VDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM-PKRDLFSYCSMIQGLSIH 192
+ YL +++I T VV++LIDM +KCG ++ +F+ M K D+ + ++I L+ H
Sbjct: 337 IHGYLIRTNIR-PNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQH 395
Query: 193 GYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEH 252
G ++A+ +F+ M+ G+ PD V+L ACSH LV+EG +E++ S + ++P+ EH
Sbjct: 396 GRGQEAIQMFDDMVRLGMKPDRITLIVLLNACSHSGLVQEGLRLYESITSCHGVIPNQEH 455
Query: 253 YACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELE 312
YAC++DLL R+G L+ MP + + W ALLG C+ +G +E G VA ++ EL+
Sbjct: 456 YACLIDLLGRAGHFDTLMNQLEKMPCKPNDEIWNALLGVCRMHGNIEFGREVAEKIIELD 515
Query: 313 PENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
P++S+ YVLLSSI+AA +W V +V+ M ER +RK SWI
Sbjct: 516 PQSSAAYVLLSSIHAAVGRWELVENVRQLMNERHVRKDRAISWI 559
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 148/310 (47%), Gaps = 33/310 (10%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N ++ K GD +A KVFD+M R++ S+ M+ GYAK+G I AR LFDK P++D
Sbjct: 90 NHLINMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVV 149
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ ++ YA++G N+AL+ ++ + + + +EY L++ C +V L+L+K +
Sbjct: 150 SWNTMVIAYAKSGFCNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQV 209
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLS-------- 190
+ + + ++++D AKC M A +LF+EM RD+ ++ +M+ G +
Sbjct: 210 LVAGF-LSNLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAA 268
Query: 191 ------------------IHGYAEQAVG-----LFNKMLNEGLIPDNAAFTVILTACSHG 227
I GYA +G LF KM+ + PD F+ L A +
Sbjct: 269 RELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASASI 328
Query: 228 RLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGA 287
+ GK + + ++ P+ + ++D+ S+ G L+ + M + W
Sbjct: 329 ASLNHGKQIHGYL-IRTNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNT 387
Query: 288 LLGACKFYGE 297
++ + +G
Sbjct: 388 IISSLAQHGR 397
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 105/247 (42%), Gaps = 42/247 (17%)
Query: 118 LMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR 177
L+ C+ +L L KWV +L + + T + LI+M +KCG+ A K+F+EM R
Sbjct: 56 LLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFLANHLINMYSKCGDYPSAYKVFDEMSTR 115
Query: 178 DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYF 237
+L+S+ M+ G + G + A LF+KM + ++ N T+++ G + + Y
Sbjct: 116 NLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWN---TMVIAYAKSGFCNDALRFYR 172
Query: 238 ETMK-----SKYSM--------------VPSPEHYACMV--------------DLLSRSG 264
E + ++YS + H +V D ++
Sbjct: 173 ELRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCS 232
Query: 265 QLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPE-NSSPYVLLS 323
++ +A L M + AW ++ +G+VE A LF+L PE N + L
Sbjct: 233 EMGDARRLFDEMIIRD-VLAWTTMVSGYAQWGDVE----AARELFDLMPEKNPVAWTSLI 287
Query: 324 SIYAAAD 330
+ YA D
Sbjct: 288 AGYARHD 294
>29635.m000449 pentatricopeptide repeat-containing protein, putative
Length = 499
Score = 266 bits (681), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 130/338 (38%), Positives = 209/338 (61%), Gaps = 1/338 (0%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
NA++ G A +VF++ DVVS++ ++ + + G++ AR +FD P++D
Sbjct: 161 NALINLYAVKGSPAAAWRVFNETVGVDVVSWSGLVLAHVRGGELELARQVFDDMPEKDVV 220
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ ++SGY++ EAL++F M ++PDE +VS++SAC+ +G+++ V Y+
Sbjct: 221 SWTAMVSGYSKANCSREALELFWEMSDAGIRPDEVTIVSVISACTNLGDVETGMNVHSYI 280
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+++ + ALI+M AKCG +DRA ++F M ++ L ++ SMI + HGYAE A
Sbjct: 281 NENGFG-WMVSLCNALINMYAKCGCVDRAWRVFNNMKRKSLITWNSMISACANHGYAEDA 339
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
LF+ MLN G+ PD F +L A +H LV+EG F+ M+ Y + S EHY C+VD
Sbjct: 340 FELFSCMLNSGIAPDGITFLALLIAYTHKGLVDEGYRLFQIMERDYGIEASIEHYGCIVD 399
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
+L R+G+L+EAYEL+ +MP+ S+ WGALL AC+ YG+V +GE V +L EL+P+
Sbjct: 400 MLGRAGRLEEAYELIVTMPIPSNDIVWGALLAACRIYGDVNMGERVVKKLLELKPDEGGY 459
Query: 319 YVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
Y+LL IY A+ + + +H++ M+E G K PG SW+
Sbjct: 460 YILLRDIYVASGRTAEANHIRQAMQESGAMKNPGYSWV 497
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 140/307 (45%), Gaps = 43/307 (14%)
Query: 32 INARKVFDDMPERDVVSFTVM-IDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQN 90
I+A + D+ V+ ++ + GD+ A+ LFD+ P+ + F ++ +I GYA++
Sbjct: 35 IHAHSLLTDLHNHSVILGKMLRFAAVSPSGDLPYAQRLFDQMPQPNTFFYNTIIRGYAKS 94
Query: 91 GLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNL-DLAKWVDCYLSQSSI----DI 145
P+ + +F M +V PDE+ L+ A S+V + + ++C ++
Sbjct: 95 SSPSYCVNLFNQMRQNHVDPDEFTFNFLIKARSRVHKVHNFPSTLECDEIHGAVFKYGFC 154
Query: 146 GQTHVVAALIDMNA-------------------------------KCGNMDRANKLFEEM 174
V ALI++ A + G ++ A ++F++M
Sbjct: 155 SHLFVQNALINLYAVKGSPAAAWRVFNETVGVDVVSWSGLVLAHVRGGELELARQVFDDM 214
Query: 175 PKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK 234
P++D+ S+ +M+ G S + +A+ LF +M + G+ PD +++AC++ VE G
Sbjct: 215 PEKDVVSWTAMVSGYSKANCSREALELFWEMSDAGIRPDEVTIVSVISACTNLGDVETGM 274
Query: 235 --HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGAC 292
H + MV ++++ ++ G + A+ + +M +S + W +++ AC
Sbjct: 275 NVHSYINENGFGWMVSLCN---ALINMYAKCGCVDRAWRVFNNMKRKSLIT-WNSMISAC 330
Query: 293 KFYGEVE 299
+G E
Sbjct: 331 ANHGYAE 337
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 114/287 (39%), Gaps = 47/287 (16%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP-------ERDVVSF------ 49
A++VF MPE+++ SW AMV G K A ++F +M E +VS
Sbjct: 207 ARQVFDDMPEKDVVSWTAMVSGYSKANCSREALELFWEMSDAGIRPDEVTIVSVISACTN 266
Query: 50 --------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
+I+ YAK G + A +F+ ++ W+ +
Sbjct: 267 LGDVETGMNVHSYINENGFGWMVSLCNALINMYAKCGCVDRAWRVFNNMKRKSLITWNSM 326
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA-KWVDCYLSQSS 142
IS A +G +A ++F M + PD ++L+ A + G +D +
Sbjct: 327 ISACANHGYAEDAFELFSCMLNSGIAPDGITFLALLIAYTHKGLVDEGYRLFQIMERDYG 386
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQAVGL 201
I+ H ++DM + G ++ A +L MP + + +++ I+G +
Sbjct: 387 IEASIEH-YGCIVDMLGRAGRLEEAYELIVTMPIPSNDIVWGALLAACRIYGDVNMGERV 445
Query: 202 FNKMLNEGLIPDNAAFTVIL--TACSHGRLVEEGKHYFETMKSKYSM 246
K+L L PD + ++L + GR E H + M+ +M
Sbjct: 446 VKKLLE--LKPDEGGYYILLRDIYVASGR-TAEANHIRQAMQESGAM 489
>30174.m009054 pentatricopeptide repeat-containing protein, putative
Length = 810
Score = 258 bits (658), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 138/393 (35%), Positives = 216/393 (54%), Gaps = 40/393 (10%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVS--FTV--------- 51
A+RVF M + + SWNA++GG + GD A ++ M +V FT+
Sbjct: 290 AERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAH 349
Query: 52 ----------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
++ Y G+ +SAR LFD ++ + W+ +
Sbjct: 350 LKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAM 409
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
ISGY+QNGLP +AL +F+ + +P + +VS++ ACSQ L L K CY + ++
Sbjct: 410 ISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCY-ALKAL 468
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+ V + IDM AK G + + +F+ + +DL S+ ++I +HG E+++ LF
Sbjct: 469 LMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFE 528
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
+M G +PD F ILT CSH LVEEG YF M++ + + P EHYAC++D+L R+
Sbjct: 529 RMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRA 588
Query: 264 GQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLS 323
G+L +A L+ MP + + W +LL C+ +GE+E+G+IVA +L ELEP+N YV LS
Sbjct: 589 GRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLS 648
Query: 324 SIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
++YA + +W DV V+ +K+ GL+K GCSWI
Sbjct: 649 NLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWI 681
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 152/338 (44%), Gaps = 45/338 (13%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERD---VVSFTVM------- 52
A+ +F + +N SWN M+GGL G + A +F +M ++ V TV+
Sbjct: 188 AQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACL 247
Query: 53 ------------------------------IDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+ YAK G + A +F + W+
Sbjct: 248 EISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNA 307
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
LI G AQNG P +AL ++ M + PD + + SL+ A + + +L K V ++ +
Sbjct: 308 LIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHG 367
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
++I + + +L+ + CG A LF+ M ++ S+ +MI G S +G E A+ LF
Sbjct: 368 LEI-DSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILF 426
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYAC-MVDLLS 261
K++++G P + A +L ACS + GK + +++ AC +D+ +
Sbjct: 427 RKLVSDGFQPSDIAVVSVLGACSQQSALRLGKE--THCYALKALLMEDVFVACSTIDMYA 484
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
+SG +KE+ + + + AS W A++ A +G+ E
Sbjct: 485 KSGCIKESRSVFDGLKNKDLAS-WNAIIAAYGVHGDGE 521
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 123/270 (45%), Gaps = 34/270 (12%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
DV +I Y K G + +A +F P R+ W+ +ISG+++NG + + +E
Sbjct: 65 DVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDML--VE 122
Query: 105 LM----NVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQ-THVVAALIDMNA 159
+M + PD +V+++ C++ +D+ + + + + + V +L+DM +
Sbjct: 123 MMAGEEGLLPDIATLVTVLPVCAR--EVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYS 180
Query: 160 KCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM-LNEGLIPDNAAFT 218
KCG + A LF++ +++ S+ +MI GL GY +A LF +M + E + +
Sbjct: 181 KCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVL 240
Query: 219 VILTAC-----------SHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLK 267
IL AC HG + G Y E + + + V ++ G L
Sbjct: 241 NILPACLEISQLRSLKELHGYSIRHGFQYDELVANGF------------VAAYAKCGMLI 288
Query: 268 EAYELLKSMPVESHASAWGALLGACKFYGE 297
A + SM ++ ++W AL+G C G+
Sbjct: 289 CAERVFYSMETKT-VNSWNALIGGCAQNGD 317
>29628.m000759 pentatricopeptide repeat-containing protein, putative
Length = 676
Score = 255 bits (652), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 207/343 (60%), Gaps = 2/343 (0%)
Query: 15 LTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPK 74
+ S N M+ G ++ G L A+ +FD MP RD +++T MIDGY +G+++ A +LF P+
Sbjct: 302 VQSCNYMINGYIRIGLLDKAQNLFDTMPVRDKITWTSMIDGYLVIGNVSEACSLFLYMPE 361
Query: 75 RDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV 134
+DA W+ +ISG+ +N L EA +F M V+P L A V +LD + +
Sbjct: 362 KDAVAWTTMISGHVRNELFAEATYLFSEMLTQGVRPLSSTYAILFGAAGAVASLDQGRQL 421
Query: 135 DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGY 194
L+++ D + +LI M AKCG + A ++F +M DL S+ SMI G S HG
Sbjct: 422 HAMLTKTLSD-NDLILENSLISMYAKCGEIRNAYRIFSQMISHDLISWNSMIMGFSHHGL 480
Query: 195 AEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYA 254
A +A+ +F M++ G P++ F +L+ACSH L+ +G F M +++ P EHY
Sbjct: 481 ANEALEVFEAMVDSGTHPNSVTFLGVLSACSHAGLINQGWEIFNAMSDVFAVQPGLEHYI 540
Query: 255 CMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE-VELGEIVANRLFELEP 313
CMV+LL R+G+LKEA EL+ +P+E + + WGALLG C F + ++ + A R+ EL+P
Sbjct: 541 CMVNLLGRAGKLKEAEELILGLPLERNHAIWGALLGVCSFSEKNADIAKRAATRILELDP 600
Query: 314 ENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
N+ +VLL +IYAA+ Q ++ ++ +M +G++K+PGCSWI
Sbjct: 601 LNAPAHVLLCNIYAASGQHIEEHKLRKEMGLKGVKKVPGCSWI 643
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 182/389 (46%), Gaps = 56/389 (14%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
D A+ +F MPERN S+NA++ GL++ G L A K+F++MPER+VVS+T M+ G A G
Sbjct: 27 DEARALFDIMPERNAVSYNALLSGLLQCGRLSEAMKLFEEMPERNVVSWTSMLCGLADAG 86
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
I A++LF++ P R+ W+ +I G +NG A +F + N +++
Sbjct: 87 KICEAKSLFEEMPDRNVVSWNAMIVGLIRNGDLEAARMVFDESPVKNAASWN----GMIA 142
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
++ G ++ A+ + + ++ I T +V+ + G ++ LF MPKR++
Sbjct: 143 GYAENGRMEEARALFDEMEDRNV-ITWTSMVSGY----CRAGEVEEGYHLFRTMPKRNIV 197
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKM-LNEGLIPDNAAFTVILTACS-----------HGR 228
S+ +MI G + +G+ E A+ LF +M + P+ F + AC+ H R
Sbjct: 198 SWTAMIGGFTWNGFYEDALLLFLEMKRGADITPNIETFISLAYACAGLGFHRLGKQLHAR 257
Query: 229 LVEEG--------------------------KHYFETMKSKYSMVPSPEHYACMVDLLSR 262
L+ EG HY S Y +V S + M++ R
Sbjct: 258 LITEGLDNDDYDGRLSKGLICMYSSIGFMDYAHYIFNKNSNYYVVQSCNY---MINGYIR 314
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPE-NSSPYVL 321
G L +A L +MPV + W +++ G V A LF PE ++ +
Sbjct: 315 IGLLDKAQNLFDTMPVRDKIT-WTSMIDGYLVIGNVS----EACSLFLYMPEKDAVAWTT 369
Query: 322 LSSIYAAADQWLDVSHVKNKMKERGLRKL 350
+ S + + + + +++ ++M +G+R L
Sbjct: 370 MISGHVRNELFAEATYLFSEMLTQGVRPL 398
>29751.m001897 pentatricopeptide repeat-containing protein, putative
Length = 547
Score = 255 bits (651), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 142/367 (38%), Positives = 215/367 (58%), Gaps = 15/367 (4%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGD------LINARKVFDDMPERDVVSFTVMID 54
+ A++VF M E++L + NAMV G + G L+ ++ D P ++V++ +I
Sbjct: 182 EKARKVFDGMQEKDLVALNAMVLGYAQNGFAKEGFLLVEQMQMLDIKP--NLVTWNTLIS 239
Query: 55 GYAKVGDIASARALFD----KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKP 110
G+A+ GD + LF + D W+ +IS + QN A F+ M P
Sbjct: 240 GFAQAGDKVMVQELFGLMSMHGFEPDVISWTSVISRFVQNSHNEAAFAAFKQMLQHGAYP 299
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
+ + SL+ AC+ + N+ + + Y ++ +V +A++DM +KCG + A L
Sbjct: 300 NSATISSLLPACASLANVRHGRELHGYAFAIGVE-EDIYVRSAIVDMYSKCGLISEARML 358
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM-LNEGLIPDNAAFTVILTACSHGRL 229
F +MP+R ++ SMI G + HGY ++A+ LFN+M E D+ +FT +LTACSHGRL
Sbjct: 359 FSKMPERHTVTWNSMIFGYANHGYCDEAIELFNQMEKTEAKKIDHLSFTAVLTACSHGRL 418
Query: 230 VEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
VE G+ F M KY +VP EHYACM+DLL R+G+L EAY+++K+MPVE WGALL
Sbjct: 419 VELGQSLFLLMHEKYKIVPRLEHYACMIDLLGRAGKLSEAYDMIKTMPVEPDLFVWGALL 478
Query: 290 GACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRK 349
GAC+ +GE++L EI A L ELEP N+ +LLS++YA A W +V+ +K ++R LRK
Sbjct: 479 GACRQHGEIDLAEIAARHLAELEPRNAGNNMLLSNLYADAGSWENVAKLKMGKRKR-LRK 537
Query: 350 LPGCSWI 356
SWI
Sbjct: 538 FSAYSWI 544
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 96/171 (56%), Gaps = 1/171 (0%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I Y + ++ R LFD+ PK + + +VLI Y+++G + L +F M+ ++P+
Sbjct: 70 LISFYTETRQLSIVRKLFDRIPKPNFYQRTVLIGAYSRHGFYQDVLDVFSEMQNERLRPN 129
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
++++ S++ AC V +L K + + + + V ALIDM ++C ++++A K+F
Sbjct: 130 KFVIPSVLRACGHVFDLQTGKILHSVILRHLFE-SDVVVNTALIDMYSRCRHVEKARKVF 188
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
+ M ++DL + +M+ G + +G+A++ L +M + P+ + +++
Sbjct: 189 DGMQEKDLVALNAMVLGYAQNGFAKEGFLLVEQMQMLDIKPNLVTWNTLIS 239
>28350.m000103 pentatricopeptide repeat-containing protein, putative
Length = 533
Score = 254 bits (650), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 134/338 (39%), Positives = 216/338 (63%), Gaps = 1/338 (0%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N ++ V G ARKVFD + D+V++ MI G AK G + +R LFDK R+A
Sbjct: 161 NTILFMYVNCGFTSEARKVFDRGMDFDIVAWNTMIMGVAKCGLVDESRRLFDKMSLRNAV 220
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ +ISGY +NG +AL++FQ M++ ++P E+ MVSL++AC+ +G + +W+ Y+
Sbjct: 221 SWNSMISGYVRNGRFFDALELFQKMQVERIEPSEFTMVSLLNACACLGAIRQGEWIHDYM 280
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+ ++ VV A+IDM +KCG++D+A ++F+ P+R L + SMI GL+++G +A
Sbjct: 281 VKKKFELNPI-VVTAIIDMYSKCGSIDKAVQVFQSAPRRGLSCWNSMILGLAMNGQENEA 339
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+ LF+ + + L PD+ +F +LTAC H +V++ K YF M+ KY + P +H++CMVD
Sbjct: 340 LQLFSVLQSSDLRPDDVSFIAVLTACDHTGMVDKAKDYFLLMRDKYKIKPGIKHFSCMVD 399
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
+L R+G L+EA EL++SM V+ A WG+LL +C YG +++ + AN L EL P SS
Sbjct: 400 VLGRAGLLEEAEELIRSMHVDPDAIIWGSLLWSCCKYGNIKMAKRAANHLIELNPSESSS 459
Query: 319 YVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+VL+++ YAAA+ + + + +KE + K PGCS I
Sbjct: 460 FVLVANAYAAANNFEEALKERLTLKENHIGKEPGCSCI 497
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 136/303 (44%), Gaps = 45/303 (14%)
Query: 60 GDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN-VKPDEYIMVSL 118
GDI A +F + + F W+ +I G++++ +P ++ ++ M L + V+P S+
Sbjct: 69 GDINYAYLVFVQIQNPNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQPQRLTYPSV 128
Query: 119 MSACSQ------------------------VGNLDLAKWVDCYLSQSS---IDIGQTHVV 151
A +Q + N L +V+C + + D G +
Sbjct: 129 FKAFAQLDLASEGAQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDRGMDFDI 188
Query: 152 AA---LIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE 208
A +I AKCG +D + +LF++M R+ S+ SMI G +G A+ LF KM E
Sbjct: 189 VAWNTMIMGVAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQKMQVE 248
Query: 209 GLIPDNAAFTVILTACSHGRLVEEGKHYFETM-KSKYSMVPSPEHYACMVDLLSRSGQLK 267
+ P +L AC+ + +G+ + M K K+ + +P ++D+ S+ G +
Sbjct: 249 RIEPSEFTMVSLLNACACLGAIRQGEWIHDYMVKKKFEL--NPIVVTAIIDMYSKCGSID 306
Query: 268 EAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLF------ELEPENSSPYVL 321
+A ++ +S P S W +++ G+ E A +LF +L P++ S +
Sbjct: 307 KAVQVFQSAP-RRGLSCWNSMILGLAMNGQ----ENEALQLFSVLQSSDLRPDDVSFIAV 361
Query: 322 LSS 324
L++
Sbjct: 362 LTA 364
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDGY 56
D A +VF P R L+ WN+M+ GL G A ++F + D+ VSF ++
Sbjct: 306 DKAVQVFQSAPRRGLSCWNSMILGLAMNGQENEALQLFSVLQSSDLRPDDVSFIAVLTAC 365
Query: 57 AKVGDIASARALF----DKAPKRDAFL-WSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
G + A+ F DK + +S ++ + GL EA ++ + M+V PD
Sbjct: 366 DHTGMVDKAKDYFLLMRDKYKIKPGIKHFSCMVDVLGRAGLLEEAEELIRS---MHVDPD 422
Query: 112 EYIMVSLMSACSQVGNLDLAK 132
I SL+ +C + GN+ +AK
Sbjct: 423 AIIWGSLLWSCCKYGNIKMAK 443
>30147.m014388 pentatricopeptide repeat-containing protein, putative
Length = 551
Score = 254 bits (648), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 126/329 (38%), Positives = 200/329 (60%), Gaps = 3/329 (0%)
Query: 30 DLIN-ARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYA 88
D +N A +VFD+ +RDVVS+ ++DG+ K G+ AR +FD P RD+ W LI+GYA
Sbjct: 186 DCLNYACQVFDESSDRDVVSYNALVDGFVKAGEFVKAREIFDLMPMRDSVSWGSLIAGYA 245
Query: 89 QNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQT 148
Q NEA+ +F M + ++PD +VS +SAC+Q+G L+ K + Y+ ++ I +
Sbjct: 246 QGSYCNEAIGLFDLMMGLKLEPDNIALVSALSACAQLGELEKGKQIHDYIKKNRIQ-ADS 304
Query: 149 HVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE 208
+ L+D AK G +D A K+FE P + L ++ +M+ G+++HG + + F++M+
Sbjct: 305 FLSTGLVDFYAKSGCIDTAIKVFELSPDKSLITWNAMLIGIAMHGNSHLLLNYFSRMMEA 364
Query: 209 GLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKE 268
G+ PD +F +L CSHG LV+E K F+ M+S Y + +HY CM DLL+R+G +KE
Sbjct: 365 GIKPDGISFLGVLVGCSHGGLVDEAKKLFDEMESIYGVRRELKHYGCMADLLARAGLIKE 424
Query: 269 AYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAA 328
A EL K +P+ W LLG C+ +G +E+ E A ++ EL+PE+ Y +L+++YA
Sbjct: 425 AVELTKGLPMGGDIFVWSGLLGGCRIHGNIEIAEQAAKQVMELKPEDGGVYSILANVYAN 484
Query: 329 ADQWLDVSHVKNKMKE-RGLRKLPGCSWI 356
AD+W DV ++ M R ++K G S I
Sbjct: 485 ADRWEDVVKIRRSMSSNRAVKKNAGRSSI 513
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 125/285 (43%), Gaps = 34/285 (11%)
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
A + FD F ++V+I + + AL F M +V PD + + AC+
Sbjct: 90 AVSTFDNIQNPSTFCYNVIIRLHTLHSSALSALHFFLQMRRFSVPPDFHSYPFALKACAH 149
Query: 125 VGNLDLAKWV-----------DCYLSQSSIDI-----------------GQTHVVA--AL 154
+ L LA+ + D Y+ S I + VV+ AL
Sbjct: 150 LRVLSLAQCLHSQVFKFGFVSDLYVINSLIHVYSLFDCLNYACQVFDESSDRDVVSYNAL 209
Query: 155 IDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDN 214
+D K G +A ++F+ MP RD S+ S+I G + Y +A+GLF+ M+ L PDN
Sbjct: 210 VDGFVKAGEFVKAREIFDLMPMRDSVSWGSLIAGYAQGSYCNEAIGLFDLMMGLKLEPDN 269
Query: 215 AAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLK 274
A L+AC+ +E+GK + +K K + +VD ++SG + A ++ +
Sbjct: 270 IALVSALSACAQLGELEKGKQIHDYIK-KNRIQADSFLSTGLVDFYAKSGCIDTAIKVFE 328
Query: 275 SMPVESHASAWGALLGACKFYGEVELGEIVANRLFE--LEPENSS 317
P +S + W A+L +G L +R+ E ++P+ S
Sbjct: 329 LSPDKSLIT-WNAMLIGIAMHGNSHLLLNYFSRMMEAGIKPDGIS 372
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 12/141 (8%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGY 56
D A +VF P+++L +WNAM+ G+ G+ F M E D +SF ++ G
Sbjct: 321 DTAIKVFELSPDKSLITWNAMLIGIAMHGNSHLLLNYFSRMMEAGIKPDGISFLGVLVGC 380
Query: 57 AKVGDIASARALFDK-----APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+ G + A+ LFD+ +R+ + + A+ GL EA+++ +G+ + D
Sbjct: 381 SHGGLVDEAKKLFDEMESIYGVRRELKHYGCMADLLARAGLIKEAVELTKGLPM---GGD 437
Query: 112 EYIMVSLMSACSQVGNLDLAK 132
++ L+ C GN+++A+
Sbjct: 438 IFVWSGLLGGCRIHGNIEIAE 458
>30170.m014308 pentatricopeptide repeat-containing protein, putative
Length = 708
Score = 253 bits (646), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 140/395 (35%), Positives = 210/395 (53%), Gaps = 40/395 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP------------------ 42
D++ +VF ++N +W+AM+ G + GD A K+F M
Sbjct: 264 DDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNAC 323
Query: 43 ---------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
E + T ++D YAK G AR F+ + D LW+
Sbjct: 324 SDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWT 383
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I+GY QNG +AL ++ M++ + P+E M S++ ACS + D + + +
Sbjct: 384 SMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKY 443
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ + T + +AL M AKCGN++ N +F MP+RD+ S+ +MI GLS +GY ++A+ L
Sbjct: 444 GLGLEVT-IGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALEL 502
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F +M + PD+ F +L+ACSH LV+ G YF M ++ ++P EHYACMVD+LS
Sbjct: 503 FEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLS 562
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVL 321
R+G+L EA E ++S ++ W LLGAC+ Y ELG +L EL + SS YVL
Sbjct: 563 RAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYVL 622
Query: 322 LSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
LS IY A + DV V++ MK RG+ K PGCSWI
Sbjct: 623 LSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWI 657
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 151/326 (46%), Gaps = 42/326 (12%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM--PERDVVSF----------- 49
A+ VF +MPERN +W M+ G A +VF+ M E DV F
Sbjct: 165 AREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAV 224
Query: 50 --------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
++ YAK G + + +F+ + +++ WS +
Sbjct: 225 PEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAM 284
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I+GYAQ+G ++ALK+F M + P E+ +V +++ACS ++ K V YL +
Sbjct: 285 ITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGF 344
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+ Q +++ AL+DM AK G + A K F + + DL + SMI G +G E A+ L+
Sbjct: 345 E-SQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYC 403
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
+M EG++P+ +L ACS+ ++G+ KY + + + + ++
Sbjct: 404 RMQMEGILPNELTMASVLKACSNLAAFDQGRQ-IHARTIKYGLGLEVTIGSALSTMYAKC 462
Query: 264 GQLKEAYELLKSMPVESHASAWGALL 289
G L+E + + MP E +W A++
Sbjct: 463 GNLEEGNIVFRRMP-ERDIISWNAMI 487
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 118/225 (52%), Gaps = 2/225 (0%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
DV + +++ Y K G + AR +FD+ P+R+ W+ +ISGYA L EA ++F+ M
Sbjct: 145 DVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMR 204
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
+E+ S++SA + +D K + C ++ + + + ++ AL+ M AKCG++
Sbjct: 205 REEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLS-ILNALVTMYAKCGSL 263
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
D + ++FE ++ ++ +MI G + G + +A+ LF++M G+ P +L AC
Sbjct: 264 DDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNAC 323
Query: 225 SHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEA 269
S VEEGK + K +VD+ ++SG ++A
Sbjct: 324 SDACAVEEGKQVHNYLL-KLGFESQLYIMTALVDMYAKSGVTEDA 367
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 153/324 (47%), Gaps = 10/324 (3%)
Query: 13 RNLTSWNAMVGGL----VKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARAL 68
+NL+S+N++V ++ G ++A+ + + +I+ YAK + A+ +
Sbjct: 6 QNLSSFNSLVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLV 65
Query: 69 FDKAPKRDAFLWSVLISGYAQNGLPNEA--LKIFQGMELMNVKPDEYIMVSLMSACSQVG 126
FD+ +D W+ LI+GY+Q G + +++FQ M N+ P+ + + +A S +
Sbjct: 66 FDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLS 125
Query: 127 NLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMI 186
++ + + + V ++L++M K G + A ++F+ MP+R+ ++ +MI
Sbjct: 126 SIFFGQQAHAVAIKMAC-FYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMI 184
Query: 187 QGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSM 246
G +I A +A +F M E + AFT +L+A + V+ GK + K +
Sbjct: 185 SGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQ-IHCLAVKTGL 243
Query: 247 VPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVAN 306
+ +V + ++ G L ++ ++ + M + ++ W A++ G+ + +
Sbjct: 244 LVFLSILNALVTMYAKCGSLDDSLQVFE-MSNDKNSITWSAMITGYAQSGDSHKALKLFS 302
Query: 307 RLFELEPENSSPYVLLSSIYAAAD 330
R+ N S + L+ + A +D
Sbjct: 303 RM-HFAGINPSEFTLVGVLNACSD 325
>29883.m001962 pentatricopeptide repeat-containing protein, putative
Length = 835
Score = 252 bits (644), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/312 (40%), Positives = 187/312 (59%), Gaps = 1/312 (0%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D V +ID Y + G I A +F+ +D W+ +IS Y NGL N+AL++F M+
Sbjct: 395 DPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMK 454
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
++PD +VS++SA + L K + ++ + I + + L+DM A+CG++
Sbjct: 455 ETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGF-ILEGSISNTLVDMYARCGSV 513
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
+ A K+F R+L + +MI +HGY E AV LF +M +E +IPD+ F +L AC
Sbjct: 514 EDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYAC 573
Query: 225 SHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASA 284
SH LV EGK + E MK +Y + P PEHY C+VDLL R L+EAY+++KSM E
Sbjct: 574 SHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEV 633
Query: 285 WGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKE 344
W ALLGAC+ + E+GE+ A +L EL+ +N YVL+S+++AA +W DV V+ +MK
Sbjct: 634 WCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKG 693
Query: 345 RGLRKLPGCSWI 356
GL K PGCSWI
Sbjct: 694 SGLTKNPGCSWI 705
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 118/268 (44%), Gaps = 43/268 (16%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDG-- 55
+A+ +F +M ER++ +WNAM+GG V G+ + A +++ +M D +F V++
Sbjct: 10 DAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACG 69
Query: 56 ---------------------------------YAKVGDIASARALFDKAPKR-DAFLWS 81
YAK DI AR LFD+ R D W+
Sbjct: 70 IVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWN 129
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+IS Y+ NG+ EAL +F M V + Y + + AC + L + + +S
Sbjct: 130 SIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKS 189
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ +V AL+ M + G M A +F + +D+ ++ SM+ G +G +A+
Sbjct: 190 G-RVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEF 248
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRL 229
F + N L PD + I+ A GRL
Sbjct: 249 FYDLQNADLKPDQVSIISIIVA--SGRL 274
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 162/374 (43%), Gaps = 52/374 (13%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERD-------VVSFTV---- 51
A +F + +++ +WN+M+ G ++ G A + F D+ D ++S V
Sbjct: 214 AAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGR 273
Query: 52 ----------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
+ID YAK ++ FD +D W+
Sbjct: 274 LGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTA 333
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
+GYAQN +AL++ + +++ + D ++ S++ AC + L K + Y + +
Sbjct: 334 AAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGL 393
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+ +ID+ +CG +D A ++FE + +D+ S+ SMI +G A +A+ +F+
Sbjct: 394 S--DPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFS 451
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDLLS 261
M GL PD IL+A +++GK H F ++ + + S + +VD+ +
Sbjct: 452 SMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGF-IIRKGFILEGSISN--TLVDMYA 508
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP--Y 319
R G +++AY++ + W A++ A YG GE ++ E P
Sbjct: 509 RCGSVEDAYKIFTCTK-NRNLILWTAMISA---YGMHGYGEAAVELFMRMKDEKIIPDHI 564
Query: 320 VLLSSIYAAADQWL 333
L+ +YA + L
Sbjct: 565 TFLALLYACSHSGL 578
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 2/179 (1%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
Y K G + A +FDK +R F W+ ++ GY NG AL++++ M + V D Y
Sbjct: 2 YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTF 61
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
L+ AC V +L + + D VV +L+ + AKC +++ A KLF+ M
Sbjct: 62 PVLLKACGIVEDLFCGAEIHGLAIKYGCD-SFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 176 KR-DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEG 233
R D+ S+ S+I S +G +A+ LF++ML G++ + F L AC ++ G
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLG 179
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 116/264 (43%), Gaps = 41/264 (15%)
Query: 1 DNAKRVFVQMPERN-LTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFT--------- 50
+ A+++F +M RN + SWN+++ G A +F +M + VV+ T
Sbjct: 110 NGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQA 169
Query: 51 ------------------------------VMIDGYAKVGDIASARALFDKAPKRDAFLW 80
++ Y + G + A +F +D W
Sbjct: 170 CEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTW 229
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ +++G+ QNGL +EAL+ F ++ ++KPD+ ++S++ A ++G L K + Y +
Sbjct: 230 NSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIK 289
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
+ D V LIDM AKC M + F+ M +DL S+ + G + + QA+
Sbjct: 290 NGFD-SNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALE 348
Query: 201 LFNKMLNEGLIPDNAAFTVILTAC 224
L ++ EG+ D IL AC
Sbjct: 349 LLRQLQMEGMDVDATMIGSILLAC 372
>28357.m000095 pentatricopeptide repeat-containing protein, putative
Length = 672
Score = 249 bits (635), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/328 (38%), Positives = 198/328 (60%), Gaps = 2/328 (0%)
Query: 29 GDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYA 88
G ++A + + ER V +M D YAK G + A +F + P++DA W+ +I+ +
Sbjct: 294 GKELHANILKHGLDERRHVGSAIM-DMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCS 352
Query: 89 QNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQT 148
QNG P EA+ +F+ M + D + + +SAC+ + L K + ++ + + D +
Sbjct: 353 QNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFD-SEV 411
Query: 149 HVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE 208
+ALIDM KCGN+ A +F+ M +++ S+ S+I HG+ E ++ LF+KML +
Sbjct: 412 FAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLED 471
Query: 209 GLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKE 268
G+ PD+ F IL+AC H V++G YF M +Y + EHYAC+VDL R+G+L E
Sbjct: 472 GIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNE 531
Query: 269 AYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAA 328
A+E +K+MP WG LLGAC+ +G VEL E+ + L +L+PENS YVLLS+++A
Sbjct: 532 AFETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHAD 591
Query: 329 ADQWLDVSHVKNKMKERGLRKLPGCSWI 356
A QW V +++ MK+RG++K+PG SWI
Sbjct: 592 AGQWGSVRKIRSLMKKRGVQKVPGYSWI 619
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 189/389 (48%), Gaps = 48/389 (12%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PER----------- 44
+A ++F MP+ N+ +WN M+ G V+ G + A +F +M P+
Sbjct: 126 DALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVT 185
Query: 45 ----------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
DV + +ID Y K D+ A +F ++ D + +
Sbjct: 186 ESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTA 245
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+ISGY NGL N+AL+IF+ + + P+ + S++ AC+ + L+L K + + +
Sbjct: 246 IISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHG 305
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+D + HV +A++DM AKCG +D A ++F MP++D + ++I S +G ++A+ LF
Sbjct: 306 LD-ERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLF 364
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDLL 260
+M EGL D + + L+AC++ + GK H F +K + E + ++D+
Sbjct: 365 RQMGREGLSYDCVSISAALSACANLPALHHGKAIHSF-MIKGAFDSEVFAE--SALIDMY 421
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE--LEPENSSP 318
+ G L A + M E + +W +++ A +G +E+ + +++ E ++P++ +
Sbjct: 422 GKCGNLSVARCVFDMMR-EKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTF 480
Query: 319 YVLLSSIYAAADQWLDVSHVKNKMKERGL 347
+LS+ A + + + +E G+
Sbjct: 481 LTILSACGHAGQVDKGIQYFRCMTEEYGI 509
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 155/336 (46%), Gaps = 42/336 (12%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM----PERDVVSF------- 49
++A+R+F +MP ++ WN M+ G VK G+ +A KVF+DM + + ++F
Sbjct: 24 EDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSITFASVLSIC 83
Query: 50 ----------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
++ Y+K G ++ A LF+ P + W+
Sbjct: 84 ASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWN 143
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I+G+ QNG +EA +F M V PD S + + ++ +L K + Y+ +
Sbjct: 144 GMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRH 203
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
I + + +ALID+ KC ++ A K+F++ D+ ++I G ++G A+ +
Sbjct: 204 GIAL-DVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEI 262
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F +L E + P+ +L AC+ + GK + K+ + + ++D+ +
Sbjct: 263 FRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANIL-KHGLDERRHVGSAIMDMYA 321
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
+ G+L AY++ + MP E A W A++ C G+
Sbjct: 322 KCGRLDLAYQIFRRMP-EKDAVCWNAIITNCSQNGK 356
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 11/188 (5%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I YA+ G I AR LFDK P +D LW+V+++G+ + G PN A+K+F+ M KP+
Sbjct: 13 LIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPN 72
Query: 112 EYIMVSLMSAC-----SQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDR 166
S++S C S+ GN + C + V AL+ M +K G +
Sbjct: 73 SITFASVLSICASEALSEFGNQLHGLVISCGFHFDPL------VANALVAMYSKFGQLSD 126
Query: 167 ANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH 226
A KLF MP ++ ++ MI G +G+ ++A LF++M++ G+ PD+ F L + +
Sbjct: 127 ALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTE 186
Query: 227 GRLVEEGK 234
+++GK
Sbjct: 187 SASLKQGK 194
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 24/153 (15%)
Query: 150 VVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEG 209
V ++LI + A+ G ++ A +LF++MP +D + M+ G G AV +F M N
Sbjct: 9 VGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQ 68
Query: 210 LIPDNAAFTVILTACS-----------HGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
P++ F +L+ C+ HG ++ G H+ P +V
Sbjct: 69 TKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHF------------DPLVANALVA 116
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
+ S+ GQL +A +L +MP +++ W ++
Sbjct: 117 MYSKFGQLSDALKLFNTMP-DTNVVTWNGMIAG 148
>28657.m000400 pentatricopeptide repeat-containing protein, putative
Length = 498
Score = 248 bits (634), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 119/328 (36%), Positives = 193/328 (58%), Gaps = 1/328 (0%)
Query: 29 GDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYA 88
G ++ A V + E + ++ MI GY G + ARA+FD+ +D WS +I+G
Sbjct: 136 GSIVEAECVLREFSEENTLAKNSMISGYLSKGHVDKARAMFDQMKAKDVASWSAIITGCT 195
Query: 89 QNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQT 148
+NG+ EAL +F+ M + + P+E +VSL+SAC+ +G L +W+ Y+ + D+
Sbjct: 196 KNGMHTEALALFEDMMVSHTLPNESALVSLLSACAHLGALHQGRWIHAYIDRIGADM-SI 254
Query: 149 HVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE 208
+ ALIDM AKCG++ K F +MP+RD+ ++ ++I G +I+G A++ LF +ML +
Sbjct: 255 RLSTALIDMYAKCGDIQSGYKFFRKMPRRDIVTWGAIISGFAIYGQAKKCFELFEEMLAD 314
Query: 209 GLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKE 268
G+ P+ F IL+ACSH VEEGK YF M + PS EHY CMVDLL R+G+LKE
Sbjct: 315 GIYPNGVIFVAILSACSHAGYVEEGKLYFNQMMVDLGIRPSIEHYGCMVDLLGRAGRLKE 374
Query: 269 AYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAA 328
A E + SMP + ++ WG++L AC+ + ++ G L ELEP + Y L ++
Sbjct: 375 AEEFIISMPEKPNSVIWGSMLSACRTHNDLNRGSWAFRHLIELEPRSGDRYKLAGLMFGN 434
Query: 329 ADQWLDVSHVKNKMKERGLRKLPGCSWI 356
A + + + ++ ++++G+ G S+I
Sbjct: 435 AGEKQEATKIRKMIEDQGMETTSGSSFI 462
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 143/297 (48%), Gaps = 47/297 (15%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+++ Y + +I+ AR++F++ P D F+++ +I G P ++L +F + L +KPD
Sbjct: 27 LLESYVTMSEISYARSIFERIPYLDVFVYNTMIRGLMLGKRPYDSLLLFNELLLGCLKPD 86
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDM--------NAKC-- 161
Y ++ ACS L K V C + ++ I TH+ ++LI M A+C
Sbjct: 87 NYTYTFVLKACSNQKALPEGKQVHCQIIKAGIS-PNTHIHSSLIHMYTSSGSIVEAECVL 145
Query: 162 ---------------------GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
G++D+A +F++M +D+ S+ ++I G + +G +A+
Sbjct: 146 REFSEENTLAKNSMISGYLSKGHVDKARAMFDQMKAKDVASWSAIITGCTKNGMHTEALA 205
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK---HYFETMKSKYSMVPSPEHYACMV 257
LF M+ +P+ +A +L+AC+H + +G+ Y + + + S+ S ++
Sbjct: 206 LFEDMMVSHTLPNESALVSLLSACAHLGALHQGRWIHAYIDRIGADMSIRLS----TALI 261
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPE 314
D+ ++ G ++ Y+ + MP + WGA++ YG+ A + FEL E
Sbjct: 262 DMYAKCGDIQSGYKFFRKMPRRDIVT-WGAIISGFAIYGQ-------AKKCFELFEE 310
>29729.m002326 pentatricopeptide repeat-containing protein, putative
Length = 656
Score = 248 bits (634), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/358 (36%), Positives = 209/358 (58%), Gaps = 7/358 (1%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
+ A ++F MP+RN SW +V GL + G + ARK FD MP +D+ ++ MI Y G
Sbjct: 254 NEAIQLFNSMPQRNEVSWTTLVTGLARNGMMELARKYFDHMPTKDIAAWNAMITAYVDQG 313
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
+A A LF+ P+++ W+ LI GYA+NG + +L+ M N KP+E + S+++
Sbjct: 314 SMAEASNLFNLMPEKNIVSWNALIDGYARNGPESNSLRYLILMLRSNFKPNETTITSVLT 373
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA-ALIDMNAKCGNMDRANKLFEEMPKRDL 179
AC + L A + +L Q V+A L+ ++CG++ A +F+++ +D+
Sbjct: 374 ACDSILELMQAHGLVIHLG-----FEQDKVLANGLVTTYSRCGDVLSARFIFDQLEIKDI 428
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFET 239
S+ +MI S HG A+ +F +ML G PD F +L+ACSH LV++G+ F++
Sbjct: 429 VSWTAMILAYSNHGCGPHALQVFARMLRSGAKPDGITFVGLLSACSHAGLVKKGQMLFDS 488
Query: 240 MKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPV-ESHASAWGALLGACKFYGEV 298
M Y + P EHY+C+VD+L R+G++ +A +++ MP E + GALLGAC+ + +V
Sbjct: 489 MSCAYGVEPRAEHYSCLVDILGRAGEMNKAMKVVSEMPPHECDGAVLGALLGACRLHKDV 548
Query: 299 ELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
L + +L E EP +S YVLL++ YAA +W + + V+ +MKER ++K PG S I
Sbjct: 549 GLANHIGEKLIEKEPTSSGSYVLLANAYAACGKWNEFAEVRKEMKERNVKKEPGFSQI 606
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 153/290 (52%), Gaps = 25/290 (8%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A++VF +MP R+ S+ +M+ +K DL A +F ++PER+VV+ + MI GY + G +
Sbjct: 70 ARKVFDEMPRRDAVSYASMITVYLKNKDLPQAEILFREIPERNVVADSAMISGYVRAGRL 129
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
AR +FD+ +R+ F W+ L+SGY + G +EA+++F M NV VS +A
Sbjct: 130 DKARQVFDQMVERNVFSWTSLVSGYFKIGNVDEAMRLFNQMPEKNV-------VSWTTAV 182
Query: 123 ---SQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDL 179
+Q G +D A+ + + + +I I T +V + ++ + +D A +LF +MP+R+L
Sbjct: 183 VGYAQNGFIDEARDIFNQMPEKNI-IAWTAMVKSYVEND----EIDEAFELFYQMPQRNL 237
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFET 239
+S+ MI G +A+ LFN M + ++T ++T + ++E + YF+
Sbjct: 238 YSWNIMISGCINANRLNEAIQLFNSMPQR----NEVSWTTLVTGLARNGMMELARKYFDH 293
Query: 240 MKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
M +K + M+ G + EA L MP E + +W AL+
Sbjct: 294 MPTK-----DIAAWNAMITAYVDQGSMAEASNLFNLMP-EKNIVSWNALI 337
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 119/215 (55%), Gaps = 9/215 (4%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
D A++VF QM ERN+ SW ++V G K G++ A ++F+ MPE++VVS+T + GYA+ G
Sbjct: 130 DKARQVFDQMVERNVFSWTSLVSGYFKIGNVDEAMRLFNQMPEKNVVSWTTAVVGYAQNG 189
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
I AR +F++ P+++ W+ ++ Y +N +EA ++F M N+ Y ++S
Sbjct: 190 FIDEARDIFNQMPEKNIIAWTAMVKSYVENDEIDEAFELFYQMPQRNL----YSWNIMIS 245
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
C L+ A + + Q + ++ T +V L A+ G M+ A K F+ MP +D+
Sbjct: 246 GCINANRLNEAIQLFNSMPQRN-EVSWTTLVTGL----ARNGMMELARKYFDHMPTKDIA 300
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNA 215
++ +MI G +A LFN M + ++ NA
Sbjct: 301 AWNAMITAYVDQGSMAEASNLFNLMPEKNIVSWNA 335
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 149/298 (50%), Gaps = 23/298 (7%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N + L G + ARKVFD+MP RD VS+ MI Y K D+ A LF + P+R+
Sbjct: 55 NVKISNLGLRGKVKEARKVFDEMPRRDAVSYASMITVYLKNKDLPQAEILFREIPERNVV 114
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
S +ISGY + G ++A ++F M NV + SL+S ++GN+D A + +
Sbjct: 115 ADSAMISGYVRAGRLDKARQVFDQMVERNV----FSWTSLVSGYFKIGNVDEAMRLFNQM 170
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+ ++ T VV A+ G +D A +F +MP++++ ++ +M++ + ++A
Sbjct: 171 PEKNVVSWTTAVVGY-----AQNGFIDEARDIFNQMPEKNIIAWTAMVKSYVENDEIDEA 225
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
LF +M L ++ ++++ C + + E F +M + + + +V
Sbjct: 226 FELFYQMPQRNLY----SWNIMISGCINANRLNEAIQLFNSMPQRNEV-----SWTTLVT 276
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENS 316
L+R+G ++ A + MP + A AW A++ A + + + E A+ LF L PE +
Sbjct: 277 GLARNGMMELARKYFDHMPTKDIA-AWNAMITA--YVDQGSMAE--ASNLFNLMPEKN 329
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 145/306 (47%), Gaps = 28/306 (9%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D V I G + AR +FD+ P+RDA ++ +I+ Y +N +A +F+ +
Sbjct: 50 DTYESNVKISNLGLRGKVKEARKVFDEMPRRDAVSYASMITVYLKNKDLPQAEILFREIP 109
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
NV D +++S + G LD A+ V + + ++ T +V+ K GN+
Sbjct: 110 ERNVVADS----AMISGYVRAGRLDKARQVFDQMVERNV-FSWTSLVSGYF----KIGNV 160
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
D A +LF +MP++++ S+ + + G + +G+ ++A +FN+M + +I A+T ++ +
Sbjct: 161 DEAMRLFNQMPEKNVVSWTTAVVGYAQNGFIDEARDIFNQMPEKNII----AWTAMVKSY 216
Query: 225 SHGRLVEEGKHYFETMKSK--YSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHA 282
++E F M + YS + M+ + +L EA +L SMP +
Sbjct: 217 VENDEIDEAFELFYQMPQRNLYS-------WNIMISGCINANRLNEAIQLFNSMPQRNEV 269
Query: 283 SAWGALLGACKFYGEVELGEIVANRLFELEP-ENSSPYVLLSSIYAAADQWLDVSHVKNK 341
S W L+ G +EL A + F+ P ++ + + + + Y + S++ N
Sbjct: 270 S-WTTLVTGLARNGMMEL----ARKYFDHMPTKDIAAWNAMITAYVDQGSMAEASNLFNL 324
Query: 342 MKERGL 347
M E+ +
Sbjct: 325 MPEKNI 330
>30204.m001733 pentatricopeptide repeat-containing protein, putative
Length = 579
Score = 248 bits (632), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 142/399 (35%), Positives = 212/399 (53%), Gaps = 53/399 (13%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER---------------- 44
D AK VF +M +R++ SW M+ G + G ++A ++ M +
Sbjct: 136 DKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERTEGDGVVMVGLIQAC 195
Query: 45 -----------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
D V T +ID YAK G + A +F+ P + W
Sbjct: 196 TSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELASRVFEGIPYKSVISWG 255
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVD------ 135
LISG+AQNG N+ L M+ KPD ++S +SAC+QVGNL + K +
Sbjct: 256 ALISGFAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQVGNLKVGKSLHGHIVKR 315
Query: 136 CYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYA 195
YL + S ALIDM AKCG + A LF+++ RDL + +MI IHG
Sbjct: 316 LYLDKVS--------GTALIDMYAKCGALTFARALFDQIEPRDLILWNAMISSYGIHGDG 367
Query: 196 EQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYAC 255
+A+ LF KM + PD+A F +L+ACSH LVEEG+++F + K + PS +HYAC
Sbjct: 368 IEALSLFLKMKETNITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKIQPSEKHYAC 427
Query: 256 MVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPEN 315
MVDLLSR+GQ++EAY+L++SM ++ + W ALL C + + +GE+VA ++ E P++
Sbjct: 428 MVDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSGCLNHKNLLIGEMVAKKILESNPDD 487
Query: 316 SSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCS 354
YVL+S+ ++ A +W D + + MK G+RK+PG S
Sbjct: 488 LGIYVLVSNFFSMAKKWDDAAVFRKIMKNTGMRKVPGYS 526
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 158/334 (47%), Gaps = 43/334 (12%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGG---DLINAR-KVFDDMPERDVVSFTVMIDG--- 55
A+ VF +MP+R++ +WN+M+ + +++N ++ + + D +FTV +
Sbjct: 37 ARNVFEKMPQRSINAWNSMIIAYSRTNYPDEVLNLYYRMISEGIKPDSSTFTVTLKACSS 96
Query: 56 --------------------------------YAKVGDIASARALFDKAPKRDAFLWSVL 83
YAK G + A+ +FDK KRD W+ +
Sbjct: 97 LMDLDMGEIIWNQAVDFGYGFDVFVVSSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTM 156
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I+G+AQ+G P +A+ I++ M+ + D +MV L+ AC+ +G+ V ++ + +
Sbjct: 157 ITGFAQSGRPLDAIDIYRTMQKERTEGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREM 216
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
++ + +LIDM AK G ++ A+++FE +P + + S+ ++I G + +G+A + +
Sbjct: 217 NMDNV-LQTSLIDMYAKNGKLELASRVFEGIPYKSVISWGALISGFAQNGFANKTLASLV 275
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
+M N G PD + L+AC+ ++ GK + + + ++D+ ++
Sbjct: 276 EMQNSGFKPDLVSLISSLSACAQVGNLKVGKSLHGHIVKRLYL--DKVSGTALIDMYAKC 333
Query: 264 GQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
G L A L + W A++ + +G+
Sbjct: 334 GALTFARALFDQIEPRD-LILWNAMISSYGIHGD 366
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 142/301 (47%), Gaps = 36/301 (11%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D S +I Y ++ +I AR +F+K P+R W+ +I Y++ P+E L ++ M
Sbjct: 17 DANSIAQLIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYSRTNYPDEVLNLYYRMI 76
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG---QTHVVAALIDMNAKC 161
+KPD + ACS + +LD+ + + ++D G VV++++++ AK
Sbjct: 77 SEGIKPDSSTFTVTLKACSSLMDLDMGE----IIWNQAVDFGYGFDVFVVSSVLNLYAKS 132
Query: 162 GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVIL 221
G MD+A +F++M KRD+ S+ +MI G + G A+ ++ M E D ++
Sbjct: 133 GKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERTEGDGVVMVGLI 192
Query: 222 TACS-----------HGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAY 270
AC+ HG +V + +++ ++D+ +++G+L+ A
Sbjct: 193 QACTSLGDSKFGLSVHGHMVRREMNMDNVLQTS------------LIDMYAKNGKLELAS 240
Query: 271 ELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYV--LLSSIYAA 328
+ + +P +S S WGAL+ + + L E++ P + L+SS+ A
Sbjct: 241 RVFEGIPYKSVIS-WGALISG---FAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSAC 296
Query: 329 A 329
A
Sbjct: 297 A 297
>29822.m003454 pentatricopeptide repeat-containing protein, putative
Length = 428
Score = 246 bits (627), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/312 (39%), Positives = 193/312 (61%), Gaps = 6/312 (1%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T ++ YAK ++ A +FD+ + D W+VL++GY ++ L +EAL++F+ M + V+
Sbjct: 68 TAVVRLYAKCKIMSDAHKMFDEIHRPDVIQWNVLMNGYIESNLESEALRVFRFMFVKGVE 127
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
PDE+ + + ++AC++ G L KW+ Y+ ++++ + AL+DM AKCG ++ A +
Sbjct: 128 PDEFCVTTALAACAKSGALWQGKWIHEYVKKTTLGF-DVFIGTALVDMYAKCGWINMAVQ 186
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE-GLIPDNAAFTVILTACSHGR 228
+FEEMPKR FS+ +MI G +IHGYA +A+ +M E GL PD +LTAC+H
Sbjct: 187 VFEEMPKRSAFSWAAMIGGYAIHGYAREAIHYLERMHAEDGLRPDGVVLLGVLTACTHAG 246
Query: 229 LVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGAL 288
L EEG+ + MK++Y +VP EHY+C+VDLL R+G+ EA L+K MP++ AS WGA+
Sbjct: 247 LQEEGRFLLDNMKARYGIVPRHEHYSCVVDLLCRAGRWDEALALIKRMPMKPLASVWGAV 306
Query: 289 LGACKFYGEVELGEIVANRLFELE----PENSSPYVLLSSIYAAADQWLDVSHVKNKMKE 344
L +C+ + EL E L +LE E + +V L +IY + + D S + + E
Sbjct: 307 LSSCRTHKNAELAEFAVQELLQLENGNGNEEDAAFVQLWNIYLSTGRGEDASKIHRLIGE 366
Query: 345 RGLRKLPGCSWI 356
RGL+K PGCS I
Sbjct: 367 RGLKKTPGCSMI 378
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 83/157 (52%), Gaps = 4/157 (2%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
DV T ++D YAK G I A +F++ PKR AF W+ +I GYA +G EA+ + M
Sbjct: 164 DVFIGTALVDMYAKCGWINMAVQVFEEMPKRSAFSWAAMIGGYAIHGYAREAIHYLERMH 223
Query: 105 LMN-VKPDEYIMVSLMSACSQVGNLDLAKW-VDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
+ ++PD +++ +++AC+ G + ++ +D ++ I H + ++D+ + G
Sbjct: 224 AEDGLRPDGVVLLGVLTACTHAGLQEEGRFLLDNMKARYGIVPRHEH-YSCVVDLLCRAG 282
Query: 163 NMDRANKLFEEMPKRDLFS-YCSMIQGLSIHGYAEQA 198
D A L + MP + L S + +++ H AE A
Sbjct: 283 RWDEALALIKRMPMKPLASVWGAVLSSCRTHKNAELA 319
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 75/148 (50%), Gaps = 2/148 (1%)
Query: 149 HVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE 208
H+ A++ + AKC M A+K+F+E+ + D+ + ++ G +A+ +F M +
Sbjct: 65 HIQTAVVRLYAKCKIMSDAHKMFDEIHRPDVIQWNVLMNGYIESNLESEALRVFRFMFVK 124
Query: 209 GLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKE 268
G+ PD T L AC+ + +GK E +K K ++ +VD+ ++ G +
Sbjct: 125 GVEPDEFCVTTALAACAKSGALWQGKWIHEYVK-KTTLGFDVFIGTALVDMYAKCGWINM 183
Query: 269 AYELLKSMPVESHASAWGALLGACKFYG 296
A ++ + MP S A +W A++G +G
Sbjct: 184 AVQVFEEMPKRS-AFSWAAMIGGYAIHG 210
>29933.m001406 pentatricopeptide repeat-containing protein, putative
Length = 2000
Score = 246 bits (627), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/346 (37%), Positives = 209/346 (60%), Gaps = 2/346 (0%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK 71
E+++ ++++ K G+ + R +FD + E+++VS+ M+ GY+ G + A+ LF+
Sbjct: 348 EKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFNI 407
Query: 72 APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA 131
P R+ WS +I+G+ +E ++F M L+ P++ SL+ AC+ +LD
Sbjct: 408 MPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKG 467
Query: 132 KWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSI 191
K + + + I T+V AL DM AK G+++ + K+F MPK++ S+ +MIQGL+
Sbjct: 468 KNLHGKIVKLGIQC-DTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAE 526
Query: 192 HGYAEQAVGLFNKMLNEGLI-PDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSP 250
G AE+++ LF +M I P+ F +L ACSH LV++G YF +M++ Y + P
Sbjct: 527 SGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKG 586
Query: 251 EHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE 310
H+ C+VD+LSR+G+L EA E + SMP + +AW ALL CK Y EL E VA +L+E
Sbjct: 587 RHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSGCKTYKNEELAERVAGKLWE 646
Query: 311 LEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+ +N + YVLLS+IYA+A +W DV V+ MK +GL+K GCSW+
Sbjct: 647 MAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAKGLKKSGGCSWV 692
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 179/364 (49%), Gaps = 45/364 (12%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP 73
+L N M+ V+ G+L ARK+FD+MP+ + +S+T +I G+ K G + + F++ P
Sbjct: 86 DLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNP 145
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKW 133
++ W+ ISGY QNG EA+K+F + VKP++ S++ AC+ +G+ L
Sbjct: 146 FQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMS 205
Query: 134 V-----------DCYLSQSSIDI----GQTHVV---------------AALIDMNAKCGN 163
V D +S S I + G+ H+ A++D+ +
Sbjct: 206 VLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDE 265
Query: 164 MDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
+ A ++F+EMP+R+ S+ +MI GY E+++ LF +M+ EG P+ + F+ IL+A
Sbjct: 266 LGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSA 325
Query: 224 CSHGRLVEEG----KHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVE 279
+ ++ G H + K V S ++D+ + G+ K+ L ++ +E
Sbjct: 326 LASVEALQAGMNIHGHVTKIGFEKDVFVSSS-----LIDMYCKCGETKDGRFLFDTI-LE 379
Query: 280 SHASAWGALLGACKFYGEVELGEIVANRLFELEP-ENSSPYVLLSSIYAAADQWLDVSHV 338
+ +W A++G G +E A LF + P N+ + + + + +Q+ ++ V
Sbjct: 380 KNMVSWNAMVGGYSLNGHME----EAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEV 435
Query: 339 KNKM 342
N+M
Sbjct: 436 FNEM 439
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 159/309 (51%), Gaps = 34/309 (11%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK 71
E +L N+++ ++ G++ AR+VFD M E+DVVS+T ++D Y ++ ++ AR +FD+
Sbjct: 216 EHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDE 275
Query: 72 APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA 131
P+R+ WS +I+ Y Q+G P E+L++F M KP+ S++SA + V L
Sbjct: 276 MPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAG 335
Query: 132 KWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSI 191
+ ++++ + V ++LIDM KCG LF+ + ++++ S+ +M+ G S+
Sbjct: 336 MNIHGHVTKIGFE-KDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSL 394
Query: 192 HGYAEQAVGLFNKM---------------------------LNE----GLIPDNAAFTVI 220
+G+ E+A LFN M NE G IP+ + F+ +
Sbjct: 395 NGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSL 454
Query: 221 LTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVES 280
L AC+ +++GK+ + K + + D+ ++SG ++ + ++ MP ++
Sbjct: 455 LCACASTASLDKGKNLHGKI-VKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKN 513
Query: 281 HASAWGALL 289
S W A++
Sbjct: 514 EVS-WTAMI 521
>29869.m001143 pentatricopeptide repeat-containing protein, putative
Length = 662
Score = 245 bits (626), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 222/402 (55%), Gaps = 49/402 (12%)
Query: 1 DNAKRVFVQMP-------------ERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV 47
D A+ +F ++P ERN+ SWN M+ VK GD+I+ARK+FD MP+RD
Sbjct: 259 DEAQNLFDKIPFYNDQGKGRTGRFERNVVSWNTMIMCYVKAGDVISARKLFDQMPDRDSF 318
Query: 48 SFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNG-----------LPNE- 95
S+ MI GY V D+ A LF K P D W+++ISGYAQ+G +P +
Sbjct: 319 SWNTMISGYVHVLDMEEASNLFHKMPSPDTLSWNLMISGYAQSGSLELAHDFFERMPQKN 378
Query: 96 -------------------ALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDC 136
A+ +F M++ K D + + SL+S S + +L L +
Sbjct: 379 LVSWNSVIAGYEKNGDYIGAINLFIQMQVEGEKSDRHTLSSLLSVSSGIVDLQLGMQIHQ 438
Query: 137 YLSQSSI-DIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGY 194
+S++ I D+ + ALI M ++CG + A +F EM ++++ S+ +MI G + HGY
Sbjct: 439 LVSKTVIPDVPLNN---ALITMYSRCGAIFEARTIFYEMKLQKEVISWNAMIGGYASHGY 495
Query: 195 AEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYA 254
A +A+ LF M + + P F +L AC+H LVEEG+ FE+M S Y + P EH+A
Sbjct: 496 ATEALELFKLMRSFKVQPTYITFISVLNACAHAGLVEEGRRIFESMVSDYGVEPRVEHFA 555
Query: 255 CMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPE 314
+VD++ R GQL+EA +L+ SM +E + WGALLGA + + VE+ + A L +LEP+
Sbjct: 556 SLVDIVGRQGQLEEALDLINSMTIEPDKAVWGALLGASRVHNNVEMARVAAEALMKLEPD 615
Query: 315 NSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+S PY+LL ++Y QW + + +++ M+ ++K SW+
Sbjct: 616 SSVPYILLYNMYVDVGQWDNAAEIRSMMERNNIKKEAAISWV 657
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 161/345 (46%), Gaps = 62/345 (17%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
+ A+ +F ++ RN +WN+M+ G VK G++ ARK+FD+MPERDVVS+ ++I GY
Sbjct: 64 NEARALFDKLERRNTVTWNSMISGYVKRGEMTKARKLFDEMPERDVVSWNLIISGYVSCR 123
Query: 61 D---IASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN---------- 107
I R LFDK P+R W+ +ISGYA+NG +EAL +F M N
Sbjct: 124 GKRFIEEGRNLFDKMPERCCVSWNTMISGYAKNGRMDEALGLFNTMPEKNSVSWNAMVSG 183
Query: 108 -------VKPDEYI----------MVSLMSACSQVGNLDLAKWVDC-YLSQSSIDIGQTH 149
V+ E+ + +L+S Q LD A+ + Y + H
Sbjct: 184 FLQNGDVVRAIEFFKRMPERDVTSLSALVSGLIQNSELDQAERILLDYGNNGGSKEYLVH 243
Query: 150 VVAALIDMNAKCGNMDRANKLFEEMP-------------KRDLFSYCSMIQGLSIHGYAE 196
LI + G +D A LF+++P +R++ S+ +MI G
Sbjct: 244 AYNTLIAGYGQRGRVDEAQNLFDKIPFYNDQGKGRTGRFERNVVSWNTMIMCYVKAGDVI 303
Query: 197 QAVGLFNKMLNEGLIPDNAAFT--VILTACSHGRLVEEGKHYFETMKSKYSMVPSPE--H 252
A LF++M PD +F+ +++ H +EE + F M PSP+
Sbjct: 304 SARKLFDQM------PDRDSFSWNTMISGYVHVLDMEEASNLFHKM-------PSPDTLS 350
Query: 253 YACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
+ M+ ++SG L+ A++ + MP + + +W +++ + G+
Sbjct: 351 WNLMISGYAQSGSLELAHDFFERMP-QKNLVSWNSVIAGYEKNGD 394
>29900.m001587 pentatricopeptide repeat-containing protein, putative
Length = 530
Score = 244 bits (624), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 128/341 (37%), Positives = 201/341 (58%), Gaps = 3/341 (0%)
Query: 18 WNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDA 77
+ A+V VK G + ARKVFD M E++V+ T MI GY G + A +F++ ++D
Sbjct: 185 YTALVDSYVKSGRVGYARKVFDMMMEKNVICSTSMISGYMNRGSVEDAEEIFERTVEKDV 244
Query: 78 FLWSVLISGYAQNGLPNE-ALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDC 136
+++ +I GY+++ E AL+++ M+ +P+ S++ ACS + ++ + V
Sbjct: 245 VVFNAMIEGYSKSVQTAEKALEVYVEMQRYGFRPNLSTFASVIGACSVLAGFEIGQQVQG 304
Query: 137 YLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAE 196
L + +ALIDM +KCG ++ A + FE+MP++++FS+ SMI G +G +
Sbjct: 305 QLLKREF-FTNVKTGSALIDMYSKCGRIEDARRAFEQMPEKNVFSWSSMIDGYGKNGRPD 363
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACM 256
+A+ LF+KM + + P+ F L+AC H LV +G+ FE+M+ +YS+ P EHYACM
Sbjct: 364 EALQLFHKMQDCCIEPNYVTFLGALSACGHAGLVSKGREIFESMEREYSLKPGMEHYACM 423
Query: 257 VDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPE-N 315
VDLL R+G L A+E + MP + + W ALL AC +G VE+ + AN LF+L E
Sbjct: 424 VDLLGRAGSLNLAWEFVMGMPEKPSSDVWAALLSACNLHGNVEMASVAANELFKLNAEGR 483
Query: 316 SSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
S YV LS+ AAA +W V+ V+ MK RG+ K G SW+
Sbjct: 484 SGAYVALSNTLAAAGKWDGVTEVREIMKSRGILKDTGSSWV 524
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 145/286 (50%), Gaps = 42/286 (14%)
Query: 26 VKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASA----RALFDKAPKRDAFLWS 81
+K G L AR++FD++P+R + ++ +I GY K+G + + R L + + D F +S
Sbjct: 88 LKCGCLKYARQMFDELPQRTLSAYNYLIGGYLKLGLVQDSMNLVRRLVLEGQRPDGFTYS 147
Query: 82 VLISGYAQNGLPNEAL-----KIFQGMELMN-VKPDEYIMVSLMSACSQVGNLDLAKWVD 135
+++ A N L + G L + V+PD+ + +L+ + + G + A+ V
Sbjct: 148 MILK--ASTSGDNVTLSCNLGSVVHGQILKSEVEPDDVLYTALVDSYVKSGRVGYARKVF 205
Query: 136 CYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIH-GY 194
+ + ++ I T +++ ++ G+++ A ++FE ++D+ + +MI+G S
Sbjct: 206 DMMMEKNV-ICSTSMISGYMNR----GSVEDAEEIFERTVEKDVVVFNAMIEGYSKSVQT 260
Query: 195 AEQAVGLFNKMLNEGLIPDNAAFTVILTACS-----------HGRLVEEGKHYFETMKSK 243
AE+A+ ++ +M G P+ + F ++ ACS G+L++ + +F +K+
Sbjct: 261 AEKALEVYVEMQRYGFRPNLSTFASVIGACSVLAGFEIGQQVQGQLLK--REFFTNVKTG 318
Query: 244 YSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
+ ++D+ S+ G++++A + MP E + +W +++
Sbjct: 319 ----------SALIDMYSKCGRIEDARRAFEQMP-EKNVFSWSSMI 353
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 105/235 (44%), Gaps = 40/235 (17%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP 73
N+ + +A++ K G + +AR+ F+ MPE++V S++ MIDGY K
Sbjct: 314 NVKTGSALIDMYSKCGRIEDARRAFEQMPEKNVFSWSSMIDGYGK--------------- 358
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKW 133
NG P+EAL++F M+ ++P+ + +SAC G + +
Sbjct: 359 ----------------NGRPDEALQLFHKMQDCCIEPNYVTFLGALSACGHAGLVSKGRE 402
Query: 134 V-DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS-YCSMIQGLSI 191
+ + + S+ G H A ++D+ + G+++ A + MP++ + +++ ++
Sbjct: 403 IFESMEREYSLKPGMEH-YACMVDLLGRAGSLNLAWEFVMGMPEKPSSDVWAALLSACNL 461
Query: 192 HGYAEQAVGLFNKMLN---EGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSK 243
HG E A N++ EG A + L A V E + E MKS+
Sbjct: 462 HGNVEMASVAANELFKLNAEGRSGAYVALSNTLAAAGKWDGVTEVR---EIMKSR 513
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 13/189 (6%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDGY 56
++A+R F QMPE+N+ SW++M+ G K G A ++F M E + V+F +
Sbjct: 332 EDARRAFEQMPEKNVFSWSSMIDGYGKNGRPDEALQLFHKMQDCCIEPNYVTFLGALSAC 391
Query: 57 AKVGDIASARALFDKAPKRDAFL-----WSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
G ++ R +F+ + + ++ ++ + G N A + GM KP
Sbjct: 392 GHAGLVSKGREIFESMEREYSLKPGMEHYACMVDLLGRAGSLNLAWEFVMGMP---EKPS 448
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
+ +L+SAC+ GN+++A L + + + G++ AL + A G D ++
Sbjct: 449 SDVWAALLSACNLHGNVEMASVAANELFKLNAE-GRSGAYVALSNTLAAAGKWDGVTEVR 507
Query: 172 EEMPKRDLF 180
E M R +
Sbjct: 508 EIMKSRGIL 516
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 4/169 (2%)
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
I T+V L+ + KCG + A ++F+E+P+R L +Y +I G G + ++ L +
Sbjct: 74 IPNTNVSIKLLILYLKCGCLKYARQMFDELPQRTLSAYNYLIGGYLKLGLVQDSMNLVRR 133
Query: 205 MLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKS---KYSMVPSPEHYACMVDLLS 261
++ EG PD +++IL A + G V + + K + P Y +VD
Sbjct: 134 LVLEGQRPDGFTYSMILKASTSGDNVTLSCNLGSVVHGQILKSEVEPDDVLYTALVDSYV 193
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE 310
+SG++ A ++ M +E + +++ G VE E + R E
Sbjct: 194 KSGRVGYARKVFDMM-MEKNVICSTSMISGYMNRGSVEDAEEIFERTVE 241
>29726.m003908 pentatricopeptide repeat-containing protein, putative
Length = 710
Score = 243 bits (619), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/314 (39%), Positives = 199/314 (63%), Gaps = 3/314 (0%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
+ +V S+ +I GY + I A LF++ P+RD F WS +ISGY QN PN AL++F
Sbjct: 393 KENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHK 452
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
M +KP+E MVS++SA + G L +W Y+ +SI + ++ AA+IDM AKCG
Sbjct: 453 MVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSD-NLSAAIIDMYAKCG 511
Query: 163 NMDRANKLFEEMPKR--DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVI 220
+++ A ++F E+ ++ + + ++I GL++HG+A ++ +F+ + + + F +
Sbjct: 512 SINNALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGV 571
Query: 221 LTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVES 280
LTAC H LVE GK +F +MKS++S+ P +HY CMVDLL R+G+L+EA E+++SMP+++
Sbjct: 572 LTACCHVGLVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPMKA 631
Query: 281 HASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKN 340
WG LL AC+ +G V++GE A L LEP + + VLLS++YA A +W D V+
Sbjct: 632 DVVIWGTLLAACRTHGNVDVGERAAENLARLEPSHGASRVLLSNMYADAGKWEDAFLVRR 691
Query: 341 KMKERGLRKLPGCS 354
M+ +++LPG S
Sbjct: 692 AMQSHRMQRLPGYS 705
Score = 140 bits (354), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 156/302 (51%), Gaps = 32/302 (10%)
Query: 30 DLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQ 89
L+ AR +FD+MPE+++VS+ VM++GY+K G + SAR +F++ P +D W +I GY +
Sbjct: 248 SLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDGYVR 307
Query: 90 NGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV-----GNLDLAKWV----DCY-LS 139
NEAL +++ M +P++ +MV L+S C + G L+ V DCY
Sbjct: 308 VERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFI 367
Query: 140 QSSI-----------------DIGQTHVVA---ALIDMNAKCGNMDRANKLFEEMPKRDL 179
QS+I IG VA ALI + +DRA +LF EMP+RD+
Sbjct: 368 QSTIIHLYAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDV 427
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFET 239
FS+ +MI G + + A+ LF+KM+ G+ P+ +L+A + ++EG+ E
Sbjct: 428 FSWSTMISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEY 487
Query: 240 MKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVE-SHASAWGALLGACKFYGEV 298
+ + S+ S A ++D+ ++ G + A E+ + + S S W A++ +G
Sbjct: 488 VHNN-SITVSDNLSAAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHA 546
Query: 299 EL 300
L
Sbjct: 547 NL 548
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 106/196 (54%), Gaps = 7/196 (3%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N+++ K G L++A+ +FD P D VS+ VMI GY K G + A LFD+ P +
Sbjct: 105 NSLINMYGKCGLLVDAKSIFDVCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCV 164
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
++ +I G++QN N+A+++F+ M + V P+E + +L+SA S G + W L
Sbjct: 165 SYTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTIATLVSAYSHFGGI----WACRML 220
Query: 139 SQSSIDIGQTHVV---AALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYA 195
I + V L+ M C ++ A LF+EMP++++ S+ M+ G S G+
Sbjct: 221 HGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFV 280
Query: 196 EQAVGLFNKMLNEGLI 211
+ A +F ++ N+ L+
Sbjct: 281 DSARVVFERIPNKDLV 296
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 95/232 (40%), Gaps = 42/232 (18%)
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC---------- 161
E ++VS + CS L K + C +S+S + + +LI+M KC
Sbjct: 66 ELVLVSALKFCSDHLFLSQGKQIHCLVSKSGLG-SNNFIQNSLINMYGKCGLLVDAKSIF 124
Query: 162 ---------------------GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
G +D A +LF+EMP + SY +MI G S + QAV
Sbjct: 125 DVCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVE 184
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSH--GRLVEEGKH--YFETMKSKYSMVPSPEHYACM 256
LF +M N G++P+ +++A SH G H + + ++ +V + +
Sbjct: 185 LFKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTN-----L 239
Query: 257 VDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRL 308
+ + L EA L MP E + +W +L G V+ +V R+
Sbjct: 240 LRMYCVCSSLVEARALFDEMP-EKNIVSWNVMLNGYSKAGFVDSARVVFERI 290
>29724.m000842 pentatricopeptide repeat-containing protein, putative
Length = 695
Score = 243 bits (619), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/394 (34%), Positives = 213/394 (54%), Gaps = 44/394 (11%)
Query: 6 VFVQMPERNLTSWNAMVGGLVKGG-------------------DLINARKVFD---DMPE 43
VF +MPE+++ SWN M+ G ++ G D + + ++
Sbjct: 261 VFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGFIADSVTVTSLLSAASNLRN 320
Query: 44 RDV------------VSF----TVMIDGYAKVGDIASARALFDK--APKRDAFLWSVLIS 85
R++ + F + +ID YAK G I ++ +F+ RD W+ +I+
Sbjct: 321 REIGKQTHAYLIRHGIKFDGMDSYLIDMYAKSGLIRISQRVFENNNIQNRDQATWNAVIA 380
Query: 86 GYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI 145
GY QNGL +A F+ M N++P+ + S++ ACS +G+++L K + + S+D
Sbjct: 381 GYTQNGLVEQAFITFRLMLEQNLRPNAVTLASILPACSSLGSINLGKQLHGVSIRYSLD- 439
Query: 146 GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM 205
V AL+DM +K G ++ A +F + +R+ +Y +MI G HG E A+ LF+ M
Sbjct: 440 QNIFVRTALVDMYSKSGAINYAESVFTQSSERNSVTYTTMILGYGQHGMGENALSLFHSM 499
Query: 206 LNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQ 265
G+ PD F +L+ACS+ LV+EG FE+MK + + PS HY C+ D+L R G+
Sbjct: 500 KKSGIQPDAITFVAVLSACSYAGLVDEGLRIFESMKRDFKIQPSTAHYCCVADMLGRVGR 559
Query: 266 LKEAYELLKSMPVESHA-SAWGALLGACKFYGEVELGEIVANRLFELEPEN--SSPYVLL 322
+ EAYE +K + E H WG+LLGAC+ +G +ELGE V+NRL E+ + + VLL
Sbjct: 560 VIEAYEFVKQLGEEGHVIEIWGSLLGACRLHGHIELGEEVSNRLLEMNSVDRLAGYQVLL 619
Query: 323 SSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
S++YA W V ++ M+E+GLRK GCSWI
Sbjct: 620 SNMYAEEANWETVDKLRKSMREKGLRKEVGCSWI 653
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 148/344 (43%), Gaps = 49/344 (14%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVF-----------DD--------- 40
D ++VF E++ WN M+GG ++ + +F DD
Sbjct: 154 DLCRKVFDSCLEKSAEVWNTMIGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTA 213
Query: 41 -----------------MPERDVVSFTVM---IDGYAKVGDIASARALFDKAPKRDAFLW 80
M V+S TV+ + Y++ + ++ +F+K P++D W
Sbjct: 214 VSQLQCLGLGQQMHAFTMKNHTVLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSW 273
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ +ISG+ QNGL E L + M+ D + SL+SA S + N ++ K YL +
Sbjct: 274 NTMISGFIQNGLDEEGLMLVYEMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIR 333
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFE--EMPKRDLFSYCSMIQGLSIHGYAEQA 198
I + LIDM AK G + + ++FE + RD ++ ++I G + +G EQA
Sbjct: 334 HGIKFDGMD--SYLIDMYAKSGLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQA 391
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
F ML + L P+ IL ACS + GK + +YS+ + +VD
Sbjct: 392 FITFRLMLEQNLRPNAVTLASILPACSSLGSINLGKQ-LHGVSIRYSLDQNIFVRTALVD 450
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGE 302
+ S+SG + A + + + +LG YG+ +GE
Sbjct: 451 MYSKSGAINYAESVFTQSSERNSVTYTTMILG----YGQHGMGE 490
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 168/368 (45%), Gaps = 50/368 (13%)
Query: 5 RVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDGYAKVG 60
+VF M +R++ +WN MV VK + A + F M + + VSF + + VG
Sbjct: 55 KVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAISSVG 114
Query: 61 DIASA-------------------------------------RALFDKAPKRDAFLWSVL 83
D +A R +FD ++ A +W+ +
Sbjct: 115 DFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTM 174
Query: 84 ISGYAQNGLPNEALKIF-QGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
I G+ QN E + +F Q M+ + D+ +S ++A SQ+ L L + + + ++
Sbjct: 175 IGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNH 234
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ T V+ A++ M ++C ++ + ++FE+MP++D+ S+ +MI G +G E+ + L
Sbjct: 235 TVLSVT-VLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLV 293
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
+M +G I D+ T +L+A S+ R E GK + + Y ++D+ ++
Sbjct: 294 YEMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDGMDSY--LIDMYAK 351
Query: 263 SGQLKEAYELLKSMPVESHASA-WGALLGACKFYGEVELGEIVANRLFELEPENSSP-YV 320
SG ++ + + ++ +++ A W A++ G VE I + E +N P V
Sbjct: 352 SGLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLE---QNLRPNAV 408
Query: 321 LLSSIYAA 328
L+SI A
Sbjct: 409 TLASILPA 416
>29648.m001935 pentatricopeptide repeat-containing protein, putative
Length = 681
Score = 241 bits (615), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 122/323 (37%), Positives = 190/323 (58%), Gaps = 1/323 (0%)
Query: 33 NARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGL 92
+A K+F ++ D V MI Y G I A+ +F+ P + W+ +I G AQN
Sbjct: 358 DACKLFSELKAYDTVLLNSMITAYCNCGRIRDAKNIFETMPSKSLISWNSIIVGLAQNAY 417
Query: 93 PNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA 152
P EAL +F M ++++ D + + S++SAC+ + +L+L + V + ++ Q V
Sbjct: 418 PLEALDVFGKMNKLDLRMDRFSLASVISACACISSLELGEQVFARAIITGLESDQA-VST 476
Query: 153 ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIP 212
+L+D KCG ++ KLF+ M K D S+ SM+ G + +GY + + LFN+M GL P
Sbjct: 477 SLVDFYCKCGFIENGRKLFDSMIKTDEVSWNSMLMGYATNGYGLETLTLFNEMKQAGLRP 536
Query: 213 DNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYEL 272
+ FT +L+AC H LVEEG+ +F MK Y + P EHY+CMVDL +R+G LKEA L
Sbjct: 537 TDITFTGVLSACDHCGLVEEGRKWFNIMKYDYHIDPGIEHYSCMVDLFARAGCLKEALNL 596
Query: 273 LKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQW 332
++ MP E+ S W ++L C +G+ +LG+ VA ++ +L PE+SS YV LS I+A + W
Sbjct: 597 VEHMPFEADCSMWSSVLRGCVAHGDKDLGKKVAQQIIQLNPESSSAYVQLSGIFATSGDW 656
Query: 333 LDVSHVKNKMKERGLRKLPGCSW 355
+ V+ M E+ ++K PG SW
Sbjct: 657 ESSALVRKIMTEKQVKKHPGFSW 679
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 175/356 (49%), Gaps = 74/356 (20%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGD 61
+A +F +MPERN SWN M+ G ++ GD + K+FD MP+++ S+ V+I G+AK G+
Sbjct: 60 DAHNLFDEMPERNCFSWNTMIEGYMRVGDKERSLKLFDLMPQKNDYSWNVVISGFAKAGE 119
Query: 62 IASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKP------DEYIM 115
+ A+ LF++ P+R+ W+ +I GYA+NG EA+ +F+ +N P D +++
Sbjct: 120 LDVAKKLFNEMPRRNGVAWNSMIHGYARNGFAREAVGLFKE---LNSNPLEKSCGDTFVL 176
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
S++ AC+ +G ++ K V + +++ ++++LI++ AKCG++D AN + + M
Sbjct: 177 ASVIGACADLGAIEYGKQVHARILMDDVELDSV-LISSLINLYAKCGHLDTANYVLKMMD 235
Query: 176 KRDLFSYCSMIQGLS--------------------------IHGYAE-----QAVGLFNK 204
+ D FS ++I G + I GY +A L N+
Sbjct: 236 EVDDFSLSALIMGYANCGRMSDAVRIFRTKSNPCFVVWNSLISGYVNNHEEMKAFALVNE 295
Query: 205 MLNEGLIPDNAAFTVILTACS-----------HGRLVEEGKHYFETMKS----KYSMVPS 249
M N + D++ TVIL+ACS HG + + G + S YS +
Sbjct: 296 MKNNRVQVDSSTITVILSACSSTGNAQYAKQMHGYVCKVGLIDSVIVASAFIDAYSKCRN 355
Query: 250 PEHYAC----------------MVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
P AC M+ G++++A + ++MP +S S W +++
Sbjct: 356 PND-ACKLFSELKAYDTVLLNSMITAYCNCGRIRDAKNIFETMPSKSLIS-WNSII 409
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 140/317 (44%), Gaps = 36/317 (11%)
Query: 5 RVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIAS 64
R+ + E + ++++ K G L A V M E D S + +I GYA G ++
Sbjct: 198 RILMDDVELDSVLISSLINLYAKCGHLDTANYVLKMMDEVDDFSLSALIMGYANCGRMSD 257
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
A +F +W+ LISGY N +A + M+ V+ D + ++SACS
Sbjct: 258 AVRIFRTKSNPCFVVWNSLISGYVNNHEEMKAFALVNEMKNNRVQVDSSTITVILSACSS 317
Query: 125 VGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEE----------- 173
GN AK + Y+ + + I V +A ID +KC N + A KLF E
Sbjct: 318 TGNAQYAKQMHGYVCKVGL-IDSVIVASAFIDAYSKCRNPNDACKLFSELKAYDTVLLNS 376
Query: 174 --------------------MPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPD 213
MP + L S+ S+I GL+ + Y +A+ +F KM L D
Sbjct: 377 MITAYCNCGRIRDAKNIFETMPSKSLISWNSIIVGLAQNAYPLEALDVFGKMNKLDLRMD 436
Query: 214 NAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYAC-MVDLLSRSGQLKEAYEL 272
+ +++AC+ +E G+ F ++ + + S + + +VD + G ++ +L
Sbjct: 437 RFSLASVISACACISSLELGEQVFA--RAIITGLESDQAVSTSLVDFYCKCGFIENGRKL 494
Query: 273 LKSMPVESHASAWGALL 289
SM +++ +W ++L
Sbjct: 495 FDSM-IKTDEVSWNSML 510
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 21/201 (10%)
Query: 154 LIDMNAKCG-NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIP 212
L+ M A+CG M A+ LF+EMP+R+ FS+ +MI+G G E+++ LF+ M +
Sbjct: 47 LLQMYARCGGTMTDAHNLFDEMPERNCFSWNTMIEGYMRVGDKERSLKLFDLMPQK---- 102
Query: 213 DNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYEL 272
++ ++ V+++ + ++ K F M + + + M+ +R+G +EA L
Sbjct: 103 NDYSWNVVISGFAKAGELDVAKKLFNEMPRRNGVA-----WNSMIHGYARNGFAREAVGL 157
Query: 273 LKSM---PVESHAS---AWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSS-- 324
K + P+E +++GAC G +E G+ V R+ + E S VL+SS
Sbjct: 158 FKELNSNPLEKSCGDTFVLASVIGACADLGAIEYGKQVHARILMDDVELDS--VLISSLI 215
Query: 325 -IYAAADQWLDVSHVKNKMKE 344
+YA ++V M E
Sbjct: 216 NLYAKCGHLDTANYVLKMMDE 236
>30169.m006317 pentatricopeptide repeat-containing protein, putative
Length = 597
Score = 241 bits (615), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 131/398 (32%), Positives = 218/398 (54%), Gaps = 45/398 (11%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV--SFTV------- 51
++A+ +F M ER++ SWNA++GG ++ ++F M V FT+
Sbjct: 190 EDARYLFETMSERDVVSWNAVIGGYAAQDFNDDSFRMFYSMMGEGVTPDCFTLGSVLKAS 249
Query: 52 ------------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ID YAK + SA AL+ K+D ++
Sbjct: 250 SRANNLIKVCQIHGIIIQLGFGSHIDLNGSLIDAYAKSEGMKSASALYKSMLKKDVISFT 309
Query: 82 VLISGYAQN-GLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL-- 138
+++GYA+ EAL +F+ M+ + ++ D+ ++++ C+ + +L + + +
Sbjct: 310 AIMTGYARKCSYSREALDLFKDMQHIFMEIDDVTFCTMLNVCADIASLSIGRQIHALAIK 369
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+ S D+ + AL+DM AK G ++ A + F EM ++++ S+ S+I G HGY +A
Sbjct: 370 YKPSYDVATGN---ALVDMYAKSGEIEDATRAFYEMKEKNVISWTSLITGYGKHGYGHEA 426
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+ L+ KM EGL P++ F +L ACSH L EG F M +KY+++P EHY+CM+D
Sbjct: 427 IALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEGWECFNNMITKYNILPRAEHYSCMID 486
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
L +R GQL+EAY ++ M ++ ++S WGA+LGAC YG + LGE+ A L ++PENS+
Sbjct: 487 LFARGGQLEEAYNMICKMNIKPNSSLWGAILGACSIYGHMSLGEVAATHLLRMDPENSAN 546
Query: 319 YVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
YV+L+ IYAA+ W ++N M+ R L+K+PG S I
Sbjct: 547 YVVLAGIYAASGSWDKACRMRNLMEYRSLKKIPGYSII 584
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 134/262 (51%), Gaps = 25/262 (9%)
Query: 26 VKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
+K G LI++ + + +S T +I Y K G+ +AR +FD+ P+R+ W+ IS
Sbjct: 53 LKQGCLIHSHIIRNGFDSNLHLS-TKLIIFYVKFGETINARKVFDRMPERNVVSWTAQIS 111
Query: 86 GYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI 145
GYA+NG +AL +F M V+ +++ S++ AC+ + L+ + + ++ I
Sbjct: 112 GYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHGCIQKNRF-I 170
Query: 146 GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM 205
G V +AL+D+++KCGNM+ A LFE M +RD+ S+ ++I G + + + + +F M
Sbjct: 171 GNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDDSFRMFYSM 230
Query: 206 LNEGLIPDNAAFTVILTACS-----------HGRLVEEGKHYFETMKSKYSMVPSPEHYA 254
+ EG+ PD +L A S HG +++ G S + S
Sbjct: 231 MGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLG------FGSHIDLNGS----- 279
Query: 255 CMVDLLSRSGQLKEAYELLKSM 276
++D ++S +K A L KSM
Sbjct: 280 -LIDAYAKSEGMKSASALYKSM 300
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 93/188 (49%), Gaps = 5/188 (2%)
Query: 104 ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGN 163
EL ++ Y+ ++ C + +L + ++ ++ D H+ LI K G
Sbjct: 31 ELTHLSSSLYM--KILQLCIETEDLKQGCLIHSHIIRNGFD-SNLHLSTKLIIFYVKFGE 87
Query: 164 MDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
A K+F+ MP+R++ S+ + I G + +G+ + A+ +F++M G+ + + +L A
Sbjct: 88 TINARKVFDRMPERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRA 147
Query: 224 CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHAS 283
C+ R +E G ++ K + + + +VDL S+ G +++A L ++M E
Sbjct: 148 CTGLRCLERGMQIHGCIQ-KNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMS-ERDVV 205
Query: 284 AWGALLGA 291
+W A++G
Sbjct: 206 SWNAVIGG 213
>30131.m006909 pentatricopeptide repeat-containing protein, putative
Length = 684
Score = 241 bits (615), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 134/349 (38%), Positives = 212/349 (60%), Gaps = 5/349 (1%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK 71
E N+ +A+V L AR VFD M RD+VS+ VM+ Y + LF +
Sbjct: 208 EGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQ 267
Query: 72 APKRDAFL----WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGN 127
K L W+ ISG QNG AL I M+ +KP+ +VS + C+ + +
Sbjct: 268 MRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLES 327
Query: 128 LDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQ 187
L K + Y+ + I + AL+ + AKCG+++ + +F MP++D+ ++ +MI
Sbjct: 328 LRGGKEIHGYVFRHWF-IEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIM 386
Query: 188 GLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMV 247
S+HG +++ LFNKML+ G+ P++ F +L+ CSH +L +EG F +M S++S+
Sbjct: 387 ANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSIT 446
Query: 248 PSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANR 307
P +HY+CMVD+LSR+G+L+EAY+ ++ MP+E A+AWGALLGAC+ Y VELG + A++
Sbjct: 447 PDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYKNVELGTLAASQ 506
Query: 308 LFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
LFE+EP+N+ YVLLS+I A +W++ S ++ M+++GL K PG SW+
Sbjct: 507 LFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWV 555
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 122/245 (49%), Gaps = 11/245 (4%)
Query: 60 GDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLM 119
GD+ A LFDK P+ D W++LISG+ Q+G P +A+ I+ + NV+PD+++++S+
Sbjct: 25 GDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVA 84
Query: 120 SACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA---ALIDMNAKCGNMDRANKLFEEMPK 176
AC+ G+L +AK + +I G + ALIDM KC ++ A +F++M
Sbjct: 85 KACAASGDLVVAKKI----HDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVV 140
Query: 177 RDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHY 236
+D+ S+ SM G Q + LF +M G+ ++ + IL AC+ + H
Sbjct: 141 KDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADYIKLGREVHG 200
Query: 237 FETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYG 296
F + M + + +V++ + S LK+A + SM +W +L A
Sbjct: 201 FIL---RNEMEGNVYVSSALVNMYASSLGLKQARLVFDSM-YHRDIVSWNVMLTAYFLNK 256
Query: 297 EVELG 301
E E G
Sbjct: 257 EYERG 261
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 111/211 (52%), Gaps = 12/211 (5%)
Query: 29 GDLINARKVFDDMPE----RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLI 84
GDL+ A+K+ DD + +D+V +ID + K + AR +FD +D W+ +
Sbjct: 91 GDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTSMT 150
Query: 85 SGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
Y G+ + + +F+ M L ++ + + S++ AC+ + L + V ++ ++ ++
Sbjct: 151 YCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADY--IKLGREVHGFILRNEME 208
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
G +V +AL++M A + +A +F+ M RD+ S+ M+ ++ E+ +GLF++
Sbjct: 209 -GNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQ 267
Query: 205 MLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
M EG+ + A++ ++ C ++ G+H
Sbjct: 268 MRKEGIKLNQASWNAAISGC-----MQNGQH 293
>28637.m000207 pentatricopeptide repeat-containing protein, putative
Length = 519
Score = 241 bits (614), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 195/338 (57%), Gaps = 1/338 (0%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
+AM+ K AR F+D+ + +VVS+T +I GY K G I A LF + P+R+
Sbjct: 138 SAMLDFYAKLCSFEEARNAFEDIQKPNVVSYTTLIHGYLKKGKIDDALQLFQEMPERNVV 197
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ ++ G++Q G EA+ +F M P++ +++ + + +L + K
Sbjct: 198 SWNAMVGGFSQMGHNEEAVSLFIEMLREGFMPNQSTFPCAITSAANMASLGMGKSFHA-C 256
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+ S+ V +L+ AKCG+M+ + +F E+P R+ S+ ++I G + +G E A
Sbjct: 257 AVKSLCTSDVFVCNSLVSFYAKCGSMEDSLLVFNELPDRNTVSWNAVICGFAQNGRGEDA 316
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
V F +M GL P++ +L AC+H LVE+G YF M+ + + PEHYACMVD
Sbjct: 317 VIFFERMRAAGLRPNSVTLLGLLCACNHAGLVEKGYMYFNQMRQEEPGILKPEHYACMVD 376
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
LLSR G+LKEA + L +P + W ALLG C + EL ++ A ++ L+PE+ S
Sbjct: 377 LLSRFGRLKEAAKFLHDLPFDPGTGFWKALLGGCHIHSNAELSDLAAQKILALDPEDVSS 436
Query: 319 YVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
YV+LS+ Y+AA +W VS ++ +MKE+GL+++PGCSWI
Sbjct: 437 YVMLSNAYSAAGRWQQVSTIRREMKEKGLKRIPGCSWI 474
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 137/296 (46%), Gaps = 71/296 (23%)
Query: 32 INARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNG 91
++ ++FD+MPE DV+S T LI +A+
Sbjct: 50 MDVDELFDEMPELDVLSVT-------------------------------TLIGRFARQH 78
Query: 92 LPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAK------------------- 132
EA+ +F M L+N+KP+E+ +++ + + + N+ L K
Sbjct: 79 RYEEAMCLFSRMLLLNIKPNEFTFATVIHSSTGLKNIYLGKQLHARTMKMGLNTIVFVGS 138
Query: 133 -WVDCYLSQSSI--------DIGQTHVVA--ALIDMNAKCGNMDRANKLFEEMPKRDLFS 181
+D Y S DI + +VV+ LI K G +D A +LF+EMP+R++ S
Sbjct: 139 AMLDFYAKLCSFEEARNAFEDIQKPNVVSYTTLIHGYLKKGKIDDALQLFQEMPERNVVS 198
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE-TM 240
+ +M+ G S G+ E+AV LF +ML EG +P+ + F +T+ ++ + GK + +
Sbjct: 199 WNAMVGGFSQMGHNEEAVSLFIEMLREGFMPNQSTFPCAITSAANMASLGMGKSFHACAV 258
Query: 241 KSKYSMVPSPEHYAC--MVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKF 294
KS + + + + C +V ++ G ++++ + +P + + +W A++ C F
Sbjct: 259 KS----LCTSDVFVCNSLVSFYAKCGSMEDSLLVFNELP-DRNTVSWNAVI--CGF 307
>29950.m001169 pentatricopeptide repeat-containing protein, putative
Length = 337
Score = 240 bits (612), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 130/358 (36%), Positives = 200/358 (55%), Gaps = 33/358 (9%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGD 61
NA F +MPE+N +WN M+ GLVK G L AR FDDMPE++VVS+T +IDGY ++
Sbjct: 10 NALLAFDEMPEKNSVTWNVMITGLVKWGKLEFARSFFDDMPEKNVVSWTGIIDGYVRMNR 69
Query: 62 IASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSA 121
I ALF + ++S F+G + P E +++++ A
Sbjct: 70 ITEGLALFRR-----------MVS--------------FEG-----IAPSEITILAILPA 99
Query: 122 CSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP--KRDL 179
S +G L + C + + + V ++ID AKCG + A++ FEE+ +++L
Sbjct: 100 ISGIGELQNCGLIHCLVEKRGFNSSDIRVTNSIIDTYAKCGCIVSASRFFEEISVERKNL 159
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFET 239
S+ S+I G ++HG ++AV F M GL P+ F +L ACSHG LV EG +FE
Sbjct: 160 VSWTSIISGFAMHGMGQEAVKRFENMERTGLKPNRVTFLSVLNACSHGGLVAEGHEFFEK 219
Query: 240 MKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVE-SHASAWGALLGACKFYGEV 298
M ++YS++P +HY C+VD+L R+G+L+EA +L +P E +A W LLGAC F+G
Sbjct: 220 MVNQYSILPDIKHYGCLVDMLGRTGRLEEAEKLALGIPSEIVNAVIWRTLLGACSFHGNS 279
Query: 299 ELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
E+GE V ++ E+E YVL+ +I+A ++ D ++ M ER K+PG S +
Sbjct: 280 EIGERVTRKIMEMERGYGGDYVLMYNIFAGVGRFEDAERLRVLMDERNAFKVPGHSLV 337
>27828.m000099 pentatricopeptide repeat-containing protein, putative
Length = 939
Score = 237 bits (604), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 182/305 (59%), Gaps = 1/305 (0%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+ID Y K G I A+ + D+ ++ W+ +I+G+ +A F M M+VKPD
Sbjct: 520 LIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPD 579
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
+ ++ AC+ + ++ L K + + + + ++ + L+DM +KCGNM + +F
Sbjct: 580 NFTYAIVLDACANLASVGLGKQIHGQIIKLELH-SDVYITSTLVDMYSKCGNMQDSALVF 638
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
E+ P +D ++ +MI G + HG E+A+G F +M E + P++A F IL AC+H ++
Sbjct: 639 EKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFID 698
Query: 232 EGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
+G HYF M ++Y + P EHY+CM+D++ RSG++ EA +L++ MP E+ A W LL
Sbjct: 699 KGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSI 758
Query: 292 CKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLP 351
CK +G +E+ E N + +LEPE+SS +LLS+IYA A W VS ++ M+ L+K P
Sbjct: 759 CKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEP 818
Query: 352 GCSWI 356
GCSWI
Sbjct: 819 GCSWI 823
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 165/356 (46%), Gaps = 45/356 (12%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFD---------------------- 39
+A+R+F +P+ +L +NA++ G V+ A + F
Sbjct: 330 DAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACA 389
Query: 40 ----DMPERDVVSFTV-------------MIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
D+ R + S +V ++D Y K ++ A +FD+ +RDA W+
Sbjct: 390 SIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNA 449
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+I+ + QNG E L +F M + ++PD++ S++ ACS L+ + + +S
Sbjct: 450 VIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSG 509
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ + + V ALIDM KCG ++ A K+ + + ++ + S+ ++I G ++ ++E A F
Sbjct: 510 LGL-DSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFF 568
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
+ML + PDN + ++L AC++ V GK + K + + +VD+ S+
Sbjct: 569 YEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQI-IKLELHSDVYITSTLVDMYSK 627
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
G ++++ + + P + + W A++ Y + LGE ++ EN P
Sbjct: 628 CGNMQDSALVFEKAPNKDFVT-WNAMICG---YAQHGLGEEALGYFERMQLENVRP 679
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 127/263 (48%), Gaps = 44/263 (16%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PER---------- 44
+ AK++ ++ ++ + SWNA++ G +A F +M P+
Sbjct: 531 EEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDAC 590
Query: 45 -----------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
DV + ++D Y+K G++ + +F+KAP +D W+
Sbjct: 591 ANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWN 650
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA-KWVDCYLSQ 140
+I GYAQ+GL EAL F+ M+L NV+P+ VS++ AC+ +G +D + + L++
Sbjct: 651 AMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTE 710
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQAV 199
++ Q + +ID+ + G + A KL +EMP + D + +++ IHG E A
Sbjct: 711 YGLE-PQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAE 769
Query: 200 GLFNKMLNEGLIPDNAAFTVILT 222
N +L L P++++ ++L+
Sbjct: 770 KATNAILQ--LEPEDSSACILLS 790
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 129/276 (46%), Gaps = 6/276 (2%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N ++ ++ L A KVF+ M +RDV+S+ MI GYA G++ A F PKRD
Sbjct: 82 NCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVV 141
Query: 79 LWSVLISGYAQNGLPNEALKIFQGM-ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY 137
W+ ++SG+ QNG +++ +F M V D+ ++ ACS + + L V
Sbjct: 142 SWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGL 201
Query: 138 LSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQ 197
+ + +AL+DM AKC +D + K+F E+P ++ + ++I G +
Sbjct: 202 IVRMGF-YKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHIL 260
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH-YFETMKSKYSMVPSPEHYACM 256
+ LF +M G+ + + + +C+ ++ G + +K + +
Sbjct: 261 GLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVG--TAT 318
Query: 257 VDLLSRSGQLKEAYELLKSMPVESHASAWGALLGAC 292
+D+ ++ G L +A + S+P S + A++ C
Sbjct: 319 LDMYAKCGSLADAQRIFNSLPKHS-LQCYNAIIVGC 353
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 145/332 (43%), Gaps = 46/332 (13%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE----------------- 43
D++ ++F ++P +N W+A++ G V+ + I ++F +M +
Sbjct: 228 DDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSC 287
Query: 44 ----------------------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
D+ T +D YAK G +A A+ +F+ PK ++
Sbjct: 288 AGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYN 347
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV-GNLDLAKWVDCYLSQ 140
+I G +N EAL+ FQ + + +E + SAC+ + G+LD + LS
Sbjct: 348 AIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHS--LSV 405
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
S V +++DM KC + A +F+EM +RD S+ ++I +G E+ +
Sbjct: 406 KSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLN 465
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH-YFETMKSKYSMVPSPEHYACMVDL 259
LF ML + PD + +L ACS + + G + +KS + ++D+
Sbjct: 466 LFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVG--GALIDM 523
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
+ G ++EA ++ + ++ S W A++
Sbjct: 524 YCKCGMIEEAKKIHDRIEQQTMVS-WNAIIAG 554
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 154/356 (43%), Gaps = 47/356 (13%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE------------------- 43
A F P+R++ SWN+M+ G ++ G+ + VF DM
Sbjct: 128 ANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACS 187
Query: 44 ---------------------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+DVV+ + ++D YAK + + +F + P ++ WS
Sbjct: 188 VLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSA 247
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+I+G QN L++F+ M+ + + + I S+ +C+ + L + + + +
Sbjct: 248 IIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKC- 306
Query: 143 IDIGQTHVV-AALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
D G V A +DM AKCG++ A ++F +PK L Y ++I G + +A+
Sbjct: 307 -DFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQF 365
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F +L GL + + + +AC+ + +G+ ++ K ++ + ++D+
Sbjct: 366 FQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQ-LHSLSVKSTLRSNICVANSILDMYG 424
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYG-EVELGEIVANRL-FELEPEN 315
+ L EA + M A +W A++ A + G E E + A+ L +EP+
Sbjct: 425 KCEALSEACCMFDEME-RRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQ 479
>30147.m013942 pentatricopeptide repeat-containing protein, putative
Length = 441
Score = 235 bits (600), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/340 (34%), Positives = 195/340 (57%), Gaps = 34/340 (10%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMEL---- 105
+ ++D Y K I SAR LFD+ P+R+ +W+ +IS Y + +AL +F ME+
Sbjct: 102 SALVDMYGKCACIFSARKLFDEIPQRNVVVWNAMISLYTHSNRVRDALDMFDAMEIEPNV 161
Query: 106 -----------------------------MNVKPDEYIMVSLMSACSQVGNLDLAKWVDC 136
+ +KP+ +++L+ AC + L+L + +
Sbjct: 162 STFNALIYGLSGVKDGSIKAIAFYWKMRQLGLKPNLITLLALLPACVGIAALNLIREIHG 221
Query: 137 YLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAE 196
Y ++ ID + + L+D +CG + A+ +F M +RD+ ++ S+I ++HG A+
Sbjct: 222 YSIRNDID-RHPQLGSGLLDAYGRCGCLINASNVFCGMKERDVVAWSSLISAYALHGEAK 280
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACM 256
A+ +F +M + PD+ F +L ACSH L +E YF M+ Y + +HY+C+
Sbjct: 281 NALEIFRQMELAKVQPDDITFLAVLKACSHAGLADEALDYFTKMQEGYRLQAVSDHYSCL 340
Query: 257 VDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENS 316
VD+LSR+G+L EAY++++ MPV+ A AWGALLGAC+ YGE+EL EIV LFE+EP+N
Sbjct: 341 VDVLSRAGRLYEAYKVIQEMPVKVTAKAWGALLGACRTYGEIELAEIVGRALFEIEPDNP 400
Query: 317 SPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+ YVLL+ IYA+ ++ + ++ +MKERG++ PG SW+
Sbjct: 401 ANYVLLARIYASVGRYDEAQRIRREMKERGVKVSPGSSWV 440
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 126/292 (43%), Gaps = 47/292 (16%)
Query: 84 ISGYAQNGLPNEALKIFQGMEL-MNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
++ + GL ++AL +F M+ + + D Y+ ++ +CS V L V ++ +
Sbjct: 34 LTSHVNRGLHHDALTLFYHMQTSLALSLDPYVFPLVLKSCSAVLCPQLGTSVHAHIVKMG 93
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR----------------------DLF 180
+ V +AL+DM KC + A KLF+E+P+R D+F
Sbjct: 94 F-LSNPFVASALVDMYGKCACIFSARKLFDEIPQRNVVVWNAMISLYTHSNRVRDALDMF 152
Query: 181 ----------SYCSMIQGLS-IHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC---SH 226
++ ++I GLS + + +A+ + KM GL P+ +L AC +
Sbjct: 153 DAMEIEPNVSTFNALIYGLSGVKDGSIKAIAFYWKMRQLGLKPNLITLLALLPACVGIAA 212
Query: 227 GRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWG 286
L+ E Y + + P+ + ++D R G L A + M E AW
Sbjct: 213 LNLIREIHGY----SIRNDIDRHPQLGSGLLDAYGRCGCLINASNVFCGMK-ERDVVAWS 267
Query: 287 ALLGACKFYGEVELG-EIVAN-RLFELEPENSSPYVLLSSIYAA--ADQWLD 334
+L+ A +GE + EI L +++P++ + +L + A AD+ LD
Sbjct: 268 SLISAYALHGEAKNALEIFRQMELAKVQPDDITFLAVLKACSHAGLADEALD 319
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 14/185 (7%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDGYA 57
NA VF M ER++ +W++++ G+ NA ++F M + D ++F ++ +
Sbjct: 250 NASNVFCGMKERDVVAWSSLISAYALHGEAKNALEIFRQMELAKVQPDDITFLAVLKACS 309
Query: 58 KVGDIASARALFDKAPKRDAFL-----WSVLISGYAQNGLPNEALKIFQGMELMNVKPDE 112
G A F K + +S L+ ++ G EA K+ Q M VK
Sbjct: 310 HAGLADEALDYFTKMQEGYRLQAVSDHYSCLVDVLSRAGRLYEAYKVIQEMP---VKVTA 366
Query: 113 YIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFE 172
+L+ AC G ++LA+ V L + D +V+ A I A G D A ++
Sbjct: 367 KAWGALLGACRTYGEIELAEIVGRALFEIEPDNPANYVLLARI--YASVGRYDEAQRIRR 424
Query: 173 EMPKR 177
EM +R
Sbjct: 425 EMKER 429
>28098.m000126 pentatricopeptide repeat-containing protein, putative
Length = 726
Score = 234 bits (598), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/391 (32%), Positives = 212/391 (54%), Gaps = 40/391 (10%)
Query: 6 VFVQMPERNLTSWNAMVGG----------------------------------LVKGGDL 31
+FV++ R++ SWN ++G K G+L
Sbjct: 286 LFVEIYRRDVISWNTLIGFYALRGDAEEMVCGFNQMRGEVALSSETLTLVISVFAKIGNL 345
Query: 32 INARKVFD---DMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYA 88
+ K+ + D V ++D YAK G++ ++ LF + P R + W +++SG
Sbjct: 346 VEGEKLHSFSIKVGLCDDVLLASLLDFYAKCGELRNSVQLFGEIPCRSSSTWKLMMSGCI 405
Query: 89 QNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI--- 145
QNG +EA+ +F+ M+ V+ I+ SL+ ACS +G+L L K + YL+++ I
Sbjct: 406 QNGYFDEAIHLFRQMQASGVQLQAQILGSLVDACSHLGSLQLCKEIHGYLTRNFFYILEG 465
Query: 146 GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM 205
H+ ++++M +CG++ A + F M +D ++ SMI+G IHG A +A+ LFN+M
Sbjct: 466 DNIHLGTSILNMYIRCGSISSAREYFNRMVAKDNITWTSMIEGYGIHGMAIEALKLFNQM 525
Query: 206 LNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQ 265
L E ++P+ F +L+ACSH L+ +G F +MK + M P +HY CMVDLL R G+
Sbjct: 526 LVERVLPNRVTFLSLLSACSHSGLIRQGCELFLSMKWVFGMEPDLDHYTCMVDLLGRCGK 585
Query: 266 LKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSI 325
+KEA ++ M V + + WGAL+ +C+ +G+ ++GE A RL E+E +N Y LLS+I
Sbjct: 586 IKEALAMIIRMVVVADSRIWGALVASCRVHGDKKVGEFAAQRLLEMESDNVGYYTLLSNI 645
Query: 326 YAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
A +W +V V+ + E+ LRK PG S I
Sbjct: 646 QAMVGKWDEVEQVRKVIHEKDLRKTPGWSCI 676
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 119/248 (47%), Gaps = 6/248 (2%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D+ MI+ YA+ G + R +FD+ RD W+ +ISGY G A ++F M
Sbjct: 163 DLYFCNTMIEVYARCGCVYYGRVMFDEMSPRDLVSWTSMISGYVSEGNVFSAFELFNKMR 222
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
L ++P+ ++ ++ C N + + CY+ ++ + I + V +++ M + G+
Sbjct: 223 L-EMEPNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKNGLLIYGS-VQNSILRMYSITGSA 280
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
LF E+ +RD+ S+ ++I ++ G AE+ V FN+M E + VI
Sbjct: 281 KEVESLFVEIYRRDVISWNTLIGFYALRGDAEEMVCGFNQMRGEVALSSETLTLVISVFA 340
Query: 225 SHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASA 284
G LVE K + ++K + A ++D ++ G+L+ + +L +P S +S
Sbjct: 341 KIGNLVEGEKLHSFSIKVG---LCDDVLLASLLDFYAKCGELRNSVQLFGEIPCRS-SST 396
Query: 285 WGALLGAC 292
W ++ C
Sbjct: 397 WKLMMSGC 404
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 120/260 (46%), Gaps = 15/260 (5%)
Query: 47 VSF--TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
+SF T +I Y+K D+ SA ++F + + W++++ + GL EAL +++ M
Sbjct: 61 ISFPSTKLISFYSKFNDLESAISVFSLLQEPNTLSWNLIMRTHLDFGLVTEALLLYKKMR 120
Query: 105 LMNVKPDEYIMVSLMSAC-SQVGNLDLAKWVDCYLSQSSIDIG---QTHVVAALIDMNAK 160
VK D + ++ A S ++ L K V C ++ +G + +I++ A+
Sbjct: 121 ESGVKTDAFTFPTINRAVMSLKSDVLLGKMVHC----DAMKLGFGYDLYFCNTMIEVYAR 176
Query: 161 CGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVI 220
CG + +F+EM RDL S+ SMI G G A LFNKM E + P++ V+
Sbjct: 177 CGCVYYGRVMFDEMSPRDLVSWTSMISGYVSEGNVFSAFELFNKMRLE-MEPNSVTLIVM 235
Query: 221 LTACSHGRLVEEGKH-YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVE 279
L C EG+ + +K+ + S ++ ++ + S +G KE L +
Sbjct: 236 LKGCYAYDNFSEGRQLHCYIIKNGLLIYGSVQN--SILRMYSITGSAKEVESLFVEI-YR 292
Query: 280 SHASAWGALLGACKFYGEVE 299
+W L+G G+ E
Sbjct: 293 RDVISWNTLIGFYALRGDAE 312
>29785.m000950 pentatricopeptide repeat-containing protein, putative
Length = 488
Score = 234 bits (597), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 130/394 (32%), Positives = 217/394 (55%), Gaps = 46/394 (11%)
Query: 6 VFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERD-------------------- 45
F MP +N+ SWN ++G + + +F DM RD
Sbjct: 92 TFFHMPCKNIYSWNIIIGEFARSNLPEKSVDLFIDM-RRDSHFQPDDFSLPLVLRACAGS 150
Query: 46 ------------------VVSFTV---MIDGYAKVGDIASARALFDKAPKRDAFLWSVLI 84
VS V ++ Y G++++AR +FD+ KRD+ LW+ L+
Sbjct: 151 GLGKLGSSVHGLCVKMGLAVSLFVGSALVFMYVTFGNVSNARVVFDEMAKRDSVLWTALL 210
Query: 85 SGYAQNGLPNEALKIFQGM--ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
SGYAQNG P L++F+ M VK D +MVSL+ C Q+G+L K V + ++
Sbjct: 211 SGYAQNGEPKLGLQVFREMVDNSTRVKLDWVVMVSLLLVCGQLGSLKHGKSVHGWCVRNC 270
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ + + + A++ M KCG + A++ F++MP+RD+FS+ S+I G + G A+ LF
Sbjct: 271 LRL-ELSLGNAIVHMYIKCGMLAYAHRFFDKMPERDVFSWSSLILGYGLSGNVSVALCLF 329
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
++M G+ P++ F IL+AC HG LVE+ + YF+ M++ Y +V HYA +VD L+R
Sbjct: 330 DQMHMRGIKPNDVTFLGILSACGHGGLVEQARSYFKMMQN-YGLVAELRHYATIVDCLAR 388
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLL 322
+G+ +EA + + +P+E + GA+L C+ + VE+GE +A RL L+PE + YVLL
Sbjct: 389 AGRFEEAEKFISDIPMEPDEAVLGAILAGCRVHNNVEVGERIAKRLIRLKPEKAGYYVLL 448
Query: 323 SSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+++YA ++ + V++ M+E+ + K+PGCS +
Sbjct: 449 ANMYAGVGRFHEAEMVRDSMQEKNMSKVPGCSLL 482
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDGYAK 58
A R F +MPER++ SW++++ G G++ A +FD M R + V+F ++
Sbjct: 294 AHRFFDKMPERDVFSWSSLILGYGLSGNVSVALCLFDQMHMRGIKPNDVTFLGILSACGH 353
Query: 59 VGDIASARALFDKAPKRDAFL----WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYI 114
G + AR+ F ++ ++ A+ G EA K + + +PDE +
Sbjct: 354 GGLVEQARSYFKMMQNYGLVAELRHYATIVDCLARAGRFEEAEKFISDIPM---EPDEAV 410
Query: 115 MVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM 174
+ ++++ C N+++ + + L + + +V+ A +M A G A + + M
Sbjct: 411 LGAILAGCRVHNNVEVGERIAKRLIRLKPEKAGYYVLLA--NMYAGVGRFHEAEMVRDSM 468
Query: 175 PKRDLFSY--CSMIQGLS 190
++++ CS+++ S
Sbjct: 469 QEKNMSKVPGCSLLESKS 486
>28694.m000666 pentatricopeptide repeat-containing protein, putative
Length = 621
Score = 234 bits (597), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 119/339 (35%), Positives = 195/339 (57%), Gaps = 10/339 (2%)
Query: 27 KGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKR--------DAF 78
K GD+ A +F +M + + S+ +I +A+ G A +F + + +
Sbjct: 225 KHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVV 284
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
WS +I G+A G EAL++F+ M+ + + + +++S C+++ L L + + ++
Sbjct: 285 SWSAIIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSLCAELAALHLGREIHGHV 344
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
++ + + V L++M AKCG + + +FE+ ++DL S+ SMI G +HG A
Sbjct: 345 VRA-VMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTERKDLISWNSMITGYGMHGLGMNA 403
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+ F++M+ G PD F +L++CSH LV EG+ F+ M KY + P EHYACMVD
Sbjct: 404 LETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLKKYRIEPQMEHYACMVD 463
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFEL-EPENSS 317
LL R+G L+EA E++K+MPV +A WGALL +C+ + E+ E A+ LF L E +
Sbjct: 464 LLGRAGLLREASEIVKNMPVAPNACVWGALLNSCRMHNNTEIAEETASHLFNLSHRETTG 523
Query: 318 PYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
Y+LLS+IYAA+ +W D + V+ K +GL+K PG SWI
Sbjct: 524 TYMLLSNIYAASGRWEDSARVRTSAKTKGLKKNPGQSWI 562
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 127/291 (43%), Gaps = 40/291 (13%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKR--- 75
N ++G K G + +AR +FD M R +S+ M+ YA D A +F +
Sbjct: 81 NELIGMYAKLGRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGME 140
Query: 76 -DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV 134
+ W+ LIS YA++G EA+++F M + V+ + ++S C+ +G AK +
Sbjct: 141 PNLVTWTSLISSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKII 200
Query: 135 DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGY 194
Y + + + V +ALI + K G+++ A LF EM + L S+ ++I + G
Sbjct: 201 HEYAVKGGFE-EYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGL 259
Query: 195 AEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYA 254
++A+ +F+++ G P + P+ ++
Sbjct: 260 CDEALEIFSQLERSGDCP--------------------------------RLRPNVVSWS 287
Query: 255 CMVDLLSRSGQLKEAYELLKSM---PVESHASAWGALLGACKFYGEVELGE 302
++D + G+ KEA EL + M + ++A +L C + LG
Sbjct: 288 AIIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSLCAELAALHLGR 338
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
D + ++ AC+ +G+ L K + ++ + HV LI M AK G M A L
Sbjct: 41 DGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQ-SHLHVGNELIGMYAKLGRMRDARHL 99
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLV 230
F+ M R S+ +M+ + + A+ +F +M +EG+ P+ +T ++++ +
Sbjct: 100 FDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLISSYARSGWH 159
Query: 231 EEGKHYFETMKSK 243
EE F M+ K
Sbjct: 160 EEAMELFGLMRMK 172
>29805.m001517 pentatricopeptide repeat-containing protein, putative
Length = 654
Score = 234 bits (596), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 200/348 (57%), Gaps = 7/348 (2%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK 71
E +++ NA++G K G L AR++FD+M E+D V++ +I G G + + LF
Sbjct: 260 EIDISVCNALIGLYAKCGSLDYARELFDEMSEKDEVTYGAIISGLMLHGYVDQSLELFRG 319
Query: 72 APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA 131
+ W+ +I+G QN L + + M+ + +P+ + S++S + +L
Sbjct: 320 MKTQILSTWNAVITGLVQNNRHEGVLDLVREMQALGFRPNAVTLSSVLSTIAYFSSLKGG 379
Query: 132 KWVDCYLSQSSIDIG---QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQG 188
K + Y +I IG +V A+IDM AK G + A ++F++ R L + ++I
Sbjct: 380 KEIHSY----AIKIGYHRNIYVATAIIDMYAKSGYLRGAQRVFDQSKDRSLVIWTAIISA 435
Query: 189 LSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVP 248
++HG A A+GLF++ML +G+ PD FT +L AC+H +V++ FE+M KY + P
Sbjct: 436 YAVHGDANLALGLFHEMLKQGIQPDPVTFTAVLAACAHCGMVDKAWEIFESMFKKYGIQP 495
Query: 249 SPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRL 308
EHYAC+V L ++ +L EA E + MP+E A WGALL +VELG+ V + L
Sbjct: 496 LVEHYACVVGALGKARRLSEAKEFVSKMPIEPSAKVWGALLHGASISSDVELGKSVCDYL 555
Query: 309 FELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
FE+EPEN+ YV+++++Y+ A +W + V+ +M + GL+K+PG SWI
Sbjct: 556 FEIEPENTGNYVIMANLYSQAGRWKEADEVRERMNKVGLQKIPGSSWI 603
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 128/265 (48%), Gaps = 42/265 (15%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV-------------SF 49
A+ VF Q+P +N S+NAM+ +A +F + ++V SF
Sbjct: 78 ARYVFDQIPHKNTFSYNAMLISYSLHNRHGDALDLFSSLASSNLVNNISITCLLKSLSSF 137
Query: 50 TV---------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
T+ +I Y+K D+ +R +FD+ KRD W+
Sbjct: 138 TLSDVKLGKEVHGFVLRTGFDADVFVENALITYYSKCYDLDLSRKVFDRMTKRDVVSWNS 197
Query: 83 LISGYAQNGLPNEALKIFQGM-ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+ISGY+Q GL + +++ M + +P+ +VS++ AC Q +L V ++ +
Sbjct: 198 MISGYSQGGLYEDCKTLYREMVDFSGFRPNGVTVVSVLQACGQTQDLAFGMEVHKFIVDN 257
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
++I V ALI + AKCG++D A +LF+EM ++D +Y ++I GL +HGY +Q++ L
Sbjct: 258 QVEI-DISVCNALIGLYAKCGSLDYARELFDEMSEKDEVTYGAIISGLMLHGYVDQSLEL 316
Query: 202 FNKMLNEGLIPDNAAFTVILTACSH 226
F M + L NA T ++ H
Sbjct: 317 FRGMKTQILSTWNAVITGLVQNNRH 341
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 12/273 (4%)
Query: 32 INARKV-FDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQN 90
++AR + F PE + S V + Y+K +A AR +FD+ P ++ F ++ ++ Y+ +
Sbjct: 46 LHARLILFSVTPENYLASKLVAL--YSKTNHLAFARYVFDQIPHKNTFSYNAMLISYSLH 103
Query: 91 GLPNEALKIFQGMELMNVKPDEYIMVSLMSACS-QVGNLDLAKWVDCYLSQSSIDIGQTH 149
+AL +F + N+ + I L S S + ++ L K V ++ ++ D
Sbjct: 104 NRHGDALDLFSSLASSNLVNNISITCLLKSLSSFTLSDVKLGKEVHGFVLRTGFD-ADVF 162
Query: 150 VVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLN-E 208
V ALI +KC ++D + K+F+ M KRD+ S+ SMI G S G E L+ +M++
Sbjct: 163 VENALITYYSKCYDLDLSRKVFDRMTKRDVVSWNSMISGYSQGGLYEDCKTLYREMVDFS 222
Query: 209 GLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYAC--MVDLLSRSGQL 266
G P+ +L AC + + G E K + C ++ L ++ G L
Sbjct: 223 GFRPNGVTVVSVLQACGQTQDLAFG---MEVHKFIVDNQVEIDISVCNALIGLYAKCGSL 279
Query: 267 KEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
A EL M E +GA++ +G V+
Sbjct: 280 DYARELFDEMS-EKDEVTYGAIISGLMLHGYVD 311
>29729.m002372 pentatricopeptide repeat-containing protein, putative
Length = 833
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 206/393 (52%), Gaps = 40/393 (10%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PERDVVSFTV----- 51
A +F M ER++ +W +++ G + A F M P+ D+++ +
Sbjct: 396 ANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTG 455
Query: 52 ----------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
++D Y+K G A +F P ++ W+ +
Sbjct: 456 LEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSI 515
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
IS Y +N LP+ ++ +F + ++ PD S+++A S V L K V YL + I
Sbjct: 516 ISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWI 575
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
V LIDM KCG + A +FE + +++L ++ SMI G HG +A+ LF+
Sbjct: 576 PF-DLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFD 634
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
+M + G+ PD+ F +L++C+H L+EEG H FE MK K+ + P EHY +VDL R+
Sbjct: 635 EMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRA 694
Query: 264 GQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLS 323
G L +AY +K+MPVE S W +LL +CK + +ELGE+VAN+L +EP S YV L
Sbjct: 695 GCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEPSKGSNYVQLL 754
Query: 324 SIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
++Y A+ W ++++ MKE+GL+K PGCSWI
Sbjct: 755 NLYGEAELWDRTANLRASMKEKGLKKTPGCSWI 787
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 179/368 (48%), Gaps = 50/368 (13%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVS--FTVM------ 52
++A++VF ++P++ + WNA++ V G +A +++ M V+S FT++
Sbjct: 293 ESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSS 352
Query: 53 -------------------------------IDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ Y+K GD A ++F +RD W
Sbjct: 353 SMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWG 412
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+ISG+ QN EAL F+ ME VKPD IM S++SAC+ + +DL + ++ +S
Sbjct: 413 SVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKS 472
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ + V ++L+DM +K G +RA +F +MP ++L ++ S+I + + ++ L
Sbjct: 473 GLQL-DVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINL 531
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYA-CMVDLL 260
F+++L L PD+ +FT +L A S + +GK + + +P ++D+
Sbjct: 532 FSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLW--IPFDLQVENTLIDMY 589
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE----VELGEIVANRLFELEPENS 316
+ G LK A + + + E + AW +++G +GE +EL + + R ++P++
Sbjct: 590 IKCGLLKYAQHIFERIS-EKNLVAWNSMIGGYGSHGECSKAIELFDEM--RSSGIKPDDV 646
Query: 317 SPYVLLSS 324
+ LLSS
Sbjct: 647 TFLSLLSS 654
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 158/336 (47%), Gaps = 61/336 (18%)
Query: 3 AKRVFVQMPER-NLTSWNAMVGGLVKGGDLINARKVFDDMPERDV--------------- 46
A+ +F ++ +R N+ +WN M+GG + G N+ + + +V
Sbjct: 193 ARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACG 252
Query: 47 ----VSF--------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
VSF T ++ Y K I SA +F++ P ++ LW+
Sbjct: 253 QGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNA 312
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLS--- 139
LIS Y NG +AL+I++ M+L V D + +++++++ S G DL + + +
Sbjct: 313 LISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRP 372
Query: 140 -QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
QSSI I +AL+ M +K G+ + AN +F M +RD+ ++ S+I G + ++A
Sbjct: 373 LQSSITIQ-----SALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEA 427
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEG--KHYFETMKSKYSM---VPSPEHY 253
+ F M + + PD+ I++AC+ V+ G H F +KS + V S
Sbjct: 428 LDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGF-VIKSGLQLDVFVASS--- 483
Query: 254 ACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
++D+ S+ G + A + MP+++ AW +++
Sbjct: 484 --LLDMYSKFGFPERAGNIFSDMPLKNLV-AWNSII 516
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 147/321 (45%), Gaps = 35/321 (10%)
Query: 2 NAKRVFVQMPER-----NLTSWNAMVGGLVKGGDLINARKVFDDMPE------------- 43
+A +VF Q+P+ ++T WN+++ G + G L F M
Sbjct: 106 DAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGYKEGKQIHSYI 165
Query: 44 -RDVVSF-----TVMIDGYAKVGDIASARALFDKAPKRDAFL-WSVLISGYAQNGLPNEA 96
R++++F T +ID Y K G AR LF K R + W+V+I G+ +NGL +
Sbjct: 166 VRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENS 225
Query: 97 LKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG---QTHVVAA 153
L+ + + NVK +SAC Q + K V C +I +G +V +
Sbjct: 226 LEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHC----DAIKVGFEDDPYVHTS 281
Query: 154 LIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPD 213
L+ M KC ++ A K+F E+P +++ + ++I +GYA A+ ++ +M ++ D
Sbjct: 282 LLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSD 341
Query: 214 NAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELL 273
+ +LT+ S L + G+ T K + S + ++ + S+ G A +
Sbjct: 342 SFTILNVLTSSSMAGLYDLGR-LIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIF 400
Query: 274 KSMPVESHASAWGALL-GACK 293
+M E AWG+++ G C+
Sbjct: 401 STMK-ERDVVAWGSVISGFCQ 420
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 104/247 (42%), Gaps = 31/247 (12%)
Query: 52 MIDGYAKVGDIASARALFDKAPKR-----DAFLWSVLISGYAQNGLPNEALKIFQGMELM 106
+I+ Y K G A +FD+ PK D +W+ +I GY + G E + F M+
Sbjct: 94 LINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSS 153
Query: 107 NVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDR 166
K K + Y+ ++ ++ + ALID KCG
Sbjct: 154 GYKE--------------------GKQIHSYIVRNMLNF-DPFLETALIDTYFKCGRPTE 192
Query: 167 ANKLFEEMPKR-DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS 225
A LF+++ R ++ ++ MI G +G E ++ + E + +++FT L+AC
Sbjct: 193 ARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACG 252
Query: 226 HGRLVEEGKH-YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASA 284
G V GK + + +K + P + ++ + + ++ A ++ +P +
Sbjct: 253 QGEFVSFGKQVHCDAIKVGFE--DDPYVHTSLLTMYGKCQMIESAEKVFNEVP-DKEIEL 309
Query: 285 WGALLGA 291
W AL+ A
Sbjct: 310 WNALISA 316
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 35/214 (16%)
Query: 95 EALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAAL 154
EALK++ + + + SL+ AC+ + NL K + + + + Q ++ ++L
Sbjct: 39 EALKLYTKSPVYTTR---FTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQ-YITSSL 94
Query: 155 IDMNAKCGNMDRANKLFEEMPKR-----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEG 209
I++ KCG A K+F+++PK D+ + S+I G G E+ + F +M + G
Sbjct: 95 INIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSG 154
Query: 210 LIPDNAAFTVILTACSHGRLVEEGKHYFE-TMKSKYSMVPSPEHYACMVDLLSRSGQLKE 268
+EGK +++ + P E ++D + G+ E
Sbjct: 155 Y--------------------KEGKQIHSYIVRNMLNFDPFLE--TALIDTYFKCGRPTE 192
Query: 269 AYELLKSMPVESHASAWGALLGACKFYGEVELGE 302
A L K + S+ AW ++G +GE L E
Sbjct: 193 ARYLFKKLKDRSNIVAWNVMIGG---FGENGLWE 223
>30169.m006555 pentatricopeptide repeat-containing protein, putative
Length = 660
Score = 233 bits (593), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 205/358 (57%), Gaps = 8/358 (2%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PERDVVSFTVMIDGY 56
A++V ++P R++ SWN+MV + G +A ++ +M P ++ +
Sbjct: 174 AQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTN 233
Query: 57 AKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMV 116
++ + +F K K+ W+V+I+ Y N +P EA+ ++ ME V+PD +V
Sbjct: 234 TTSDNVLYVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIV 293
Query: 117 SLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK 176
S++ A + L L + V + + + + + ALIDM AKCG + A +F +M
Sbjct: 294 SVLPAYGDLSALSLGRRVHKFAERKKL-LPNLLLENALIDMYAKCGCLRDARAVFNQMQF 352
Query: 177 RDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHY 236
RD+ S+ S+I G AV +F +M N GL PD+ AF +L ACSH L+++G++Y
Sbjct: 353 RDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYY 412
Query: 237 FETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYG 296
F M ++ + P EH+AC+VDLL R+G++ EAY ++ MP+E WG LL AC+ Y
Sbjct: 413 FNLM-AECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYS 471
Query: 297 EVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCS 354
+ +G + A++L L PE+S YVLLS+IYA A +W DV+ +++ M+ +G++KLPG S
Sbjct: 472 NMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGIS 529
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 7/174 (4%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
YA G+ AR +FD+ ++ ++V+I Y N L +AL +++ M PD Y
Sbjct: 64 YAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTY 123
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIG---QTHVVAALIDMNAKCGNMDRANKLFE 172
++ A S+ +L WV + + + IG +V LI M KC ++ A ++ +
Sbjct: 124 PCVLKASSRSDSL----WVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLD 179
Query: 173 EMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH 226
E+P RD+ S+ SM+ + +G A+ L +M L P++ +L A ++
Sbjct: 180 EIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTN 233
>29938.m000602 pentatricopeptide repeat-containing protein, putative
Length = 730
Score = 232 bits (591), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 202/391 (51%), Gaps = 39/391 (9%)
Query: 5 RVFVQMPERNLTSWNAMVGGLVKGGDL-------------------------------IN 33
++ V+ E N+ +WN + GG V+ G+ I
Sbjct: 285 KMRVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIG 344
Query: 34 ARKVFDDMPERDVVSF--------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
A K+ ++ + SF +I Y++ + A LF ++ W+ ++S
Sbjct: 345 AIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLS 404
Query: 86 GYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI 145
GY EA +F+ M L ++P+ + S++ C++V NL K CY+ + +
Sbjct: 405 GYTHMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFK 464
Query: 146 GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM 205
+ +L+DM A+ G + A +LF+ + +RD +Y S+I G I G +A+ LF++M
Sbjct: 465 DYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEM 524
Query: 206 LNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQ 265
+ PD+ +L+ACSH LV EG FE M S Y ++P EH+ACMVDL R+G
Sbjct: 525 KKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGL 584
Query: 266 LKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSI 325
L +A E++ MP ++ W LLGAC+ +G E+GE A +L E+ PENS YVL++++
Sbjct: 585 LHKAKEMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYVLIANM 644
Query: 326 YAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
YAAA W ++ V+ M++ G+RK PGC+W+
Sbjct: 645 YAAAGCWSKLAKVRTYMRDLGVRKAPGCAWV 675
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 129/267 (48%), Gaps = 5/267 (1%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK-- 71
NL N++V K G+L AR +F++M ERD VS+ MI GYA G A LF K
Sbjct: 228 NLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKMR 287
Query: 72 --APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLD 129
+ + W+ + G Q+G EAL++ M + D + + ACS +G +
Sbjct: 288 VEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIK 347
Query: 130 LAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGL 189
L + + +S D G +V ALI M ++C + A LF+ +++ ++ SM+ G
Sbjct: 348 LGREIHGSAIRSFYD-GVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGY 406
Query: 190 SIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPS 249
+ +E+A LF +ML G+ P+ IL C+ ++ GK + + +
Sbjct: 407 THMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDY 466
Query: 250 PEHYACMVDLLSRSGQLKEAYELLKSM 276
+ +VD+ +RSG++ EA L S+
Sbjct: 467 LLLWNSLVDMYARSGKVLEAKRLFDSI 493
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 112/257 (43%), Gaps = 46/257 (17%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
++ Y +A A + + + W++LIS Y +NGL EAL ++ M ++PD
Sbjct: 134 LVTFYTNFDLLADAHTITENSNILHPLPWNLLISSYVRNGLHGEALSAYKQMTHKGIRPD 193
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG-QTHVVAALIDMNAKCGNMDRANKL 170
++ S++ AC + LD+A + S ++ +G V +L+ M AK G + A L
Sbjct: 194 KFTYPSVLKACGE--KLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTARCL 251
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLV 230
FE M +RD S+ +MI G + G ++A LF KM EG+ + + I C
Sbjct: 252 FENMLERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGC------ 305
Query: 231 EEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM-----PVESHASAW 285
+SG +EA ELL M ++S A+
Sbjct: 306 ------------------------------VQSGNFEEALELLSHMRSYGIDMDSVATII 335
Query: 286 GALLGACKFYGEVELGE 302
G LGAC G ++LG
Sbjct: 336 G--LGACSHIGAIKLGR 350
>30010.m000680 pentatricopeptide repeat-containing protein, putative
Length = 524
Score = 230 bits (586), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 130/337 (38%), Positives = 198/337 (58%), Gaps = 10/337 (2%)
Query: 29 GDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYA 88
G L NA KVFD + +V + M+D YAK D+ SA LF + KRD W+ +ISG++
Sbjct: 134 GCLYNAHKVFDGILHPWIVEYNAMLDAYAKNNDMGSAILLFKRMLKRDVVSWTTVISGFS 193
Query: 89 QNGLPNEALKIFQGM------ELMNVKPDEYIMVSLMSACSQV---GNLDLAKWVDCYLS 139
++GL EA+ F+ M L VKP+E VS++S+C+ + G+L L K + +
Sbjct: 194 RSGLFREAINFFRVMIAHEDVSLGLVKPNEATYVSVLSSCASLDEGGSLFLGKQMHGSII 253
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAV 199
++ + + + ALID K G ++ A ++F M + + S+ +MI L+ +G +QA+
Sbjct: 254 RNEV-VLTVFIGTALIDFYGKVGCLNSAIRVFNSMTIKQICSWNAMISCLANNGREKQAL 312
Query: 200 GLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDL 259
+F M +G P+ F V+LTAC+ +LV+ G F++M S YS+ P EHY C+VDL
Sbjct: 313 DMFEMMEEKGPSPNEVTFVVVLTACTRAKLVQFGMRLFQSMWSDYSVKPIMEHYGCVVDL 372
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPY 319
L R+G L+EA E+++SMP E AS GALLGACK +G +L V RL L+P + +
Sbjct: 373 LGRAGLLREASEIIRSMPFEPDASVLGALLGACKIHGANKLANEVGGRLLRLQPLHCGQF 432
Query: 320 VLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
VLLS+I A ++W + V+ M E G+ K+P S I
Sbjct: 433 VLLSNINAGLEKWSVAADVRKAMVEAGISKVPAYSLI 469
>30075.m001161 pentatricopeptide repeat-containing protein, putative
Length = 569
Score = 225 bits (573), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 199/338 (58%), Gaps = 4/338 (1%)
Query: 19 NAMVGGLVKGGDLINARKVFDDM-PERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDA 77
NA++ K + A +VFD+M ++D VS ++I+GY + G I A +F + +D
Sbjct: 228 NALLNMYTKYRQMDAASRVFDEMGSKKDAVSHAILINGYVEKGLIDLASDIFYQIFDKDL 287
Query: 78 FLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY 137
LW+V++ GY + P +AL++F+ M+ + PDE MV +++AC+ + +L + V +
Sbjct: 288 VLWNVMLHGYIKAKRPIDALELFKKMDNEGLIPDENTMVGILAACASLSDLQYGRVVHMF 347
Query: 138 LSQSSIDIGQ-THVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAE 196
++++ DI Q V ALIDM KCG+ + A F +M +D+F++ ++I+GL+ +GY
Sbjct: 348 INRN--DIKQDIFVKTALIDMYFKCGSPEEALVTFYKMEYKDVFTWTAVIEGLANNGYGN 405
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACM 256
A+ LF +M +G+ P+ A F LT+C H LV+EG F M Y + P EH+ C+
Sbjct: 406 VALNLFKQMEEQGIQPNEATFVSALTSCRHSGLVKEGCQMFRKMVEVYKLQPRFEHFGCL 465
Query: 257 VDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENS 316
+D+LSR+G L +AYE +K + E +A+ +L AC Y E ++GE A + EL P++
Sbjct: 466 IDVLSRAGLLAQAYEFVKLLRPEERLAAYKIVLSACIKYLEFDVGEKAALEMAELSPQSC 525
Query: 317 SPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCS 354
++LLS+ YA A QW V+ + MK RK PG S
Sbjct: 526 EMHILLSNFYALAGQWERVAKTRRTMKRLNTRKEPGIS 563
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 43/231 (18%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLI-SGYAQNGLPNEALKIFQ 101
+ D+ ++ Y + + AR LFDK +RD W+ + + YA + + + +F+
Sbjct: 116 DSDIYVQNALLHFYGSIKQLNYARLLFDKMYERDITSWNTFMGASYASSNSVIDLMDLFK 175
Query: 102 GMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG---QTHVVAALIDMN 158
+ V D+ +V L SA +Q D + + +I +G +V AL++M
Sbjct: 176 RLISEGVGADKITLVILFSAFAQ-AQCDESLEYGTAVHSCAIKMGLVSMLNVSNALLNMY 234
Query: 159 AKCGNMDRANKLFEEM-PKRDLFSYCSMIQG--------------------------LSI 191
K MD A+++F+EM K+D S+ +I G + +
Sbjct: 235 TKYRQMDAASRVFDEMGSKKDAVSHAILINGYVEKGLIDLASDIFYQIFDKDLVLWNVML 294
Query: 192 HGYAE-----QAVGLFNKMLNEGLIPDNAAFTVILTACS------HGRLVE 231
HGY + A+ LF KM NEGLIPD IL AC+ +GR+V
Sbjct: 295 HGYIKAKRPIDALELFKKMDNEGLIPDENTMVGILAACASLSDLQYGRVVH 345
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 124/277 (44%), Gaps = 18/277 (6%)
Query: 80 WSVLISGYAQNGLPNEALKIFQ-GMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ LI Y++ P +++ + +EL + PD Y L++ACS++ + + V +L
Sbjct: 51 WNCLIRAYSKTHTPIKSILVSNYFIELGSFYPDRYTYPLLLNACSRLSFASMGQLVHTHL 110
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQ- 197
+ +D +V AL+ ++ A LF++M +RD+ S+ + + YA
Sbjct: 111 IKIGLD-SDIYVQNALLHFYGSIKQLNYARLLFDKMYERDITSWNTFMGA----SYASSN 165
Query: 198 ----AVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKS---KYSMVPSP 250
+ LF ++++EG+ D ++ +A + + +E Y + S K +V
Sbjct: 166 SVIDLMDLFKRLISEGVGADKITLVILFSAFAQAQ-CDESLEYGTAVHSCAIKMGLVSML 224
Query: 251 EHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE 310
++++ ++ Q+ A + M + A + L+ Y E L ++ ++ ++
Sbjct: 225 NVSNALLNMYTKYRQMDAASRVFDEMGSKKDAVSHAILING---YVEKGLIDLASDIFYQ 281
Query: 311 LEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGL 347
+ ++ + ++ Y A + +D + KM GL
Sbjct: 282 IFDKDLVLWNVMLHGYIKAKRPIDALELFKKMDNEGL 318
>29726.m003970 pentatricopeptide repeat-containing protein, putative
Length = 623
Score = 224 bits (572), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/340 (35%), Positives = 188/340 (55%), Gaps = 3/340 (0%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N+++ K G L +A KV + VS+ +ID Y KVG + A +F P+++
Sbjct: 242 NSILSLYAKFGSLNDALKVVESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQSLPEKNIV 301
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ +I+GYA+NG EAL+ F M PD++ +++ ACS + L + V
Sbjct: 302 SWTSMITGYARNGYGEEALRFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGRMVHGCA 361
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
++ +V L++M AKCG++D + F ++ +DL S+ +++ +HG A +A
Sbjct: 362 IRNGFST-YLYVGNGLVNMYAKCGDLDGSILAFHDICAKDLVSFNALLFAFGLHGKASEA 420
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+ L+ M+ G PD F +L CSH L+EEG+ +F +MKS + + +H ACMVD
Sbjct: 421 LQLYEDMMTCGTKPDKMTFIGLLMTCSHSGLIEEGRLFFNSMKSVHGLSYEADHVACMVD 480
Query: 259 LLSRSGQLKEAYELLK--SMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENS 316
+L R G L EA EL+K S + AS+ ALLGAC +GEVE+G + L LEP
Sbjct: 481 MLGRGGYLAEAKELVKKYSKTSDVEASSCEALLGACSAHGEVEMGTYLGKTLKTLEPNKE 540
Query: 317 SPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
YVL S++Y QW + V+ M + GL+K+PGCSWI
Sbjct: 541 ISYVLQSNLYCVRGQWKEAEMVRKAMVDEGLKKMPGCSWI 580
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 134/330 (40%), Gaps = 77/330 (23%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
++ T I G I AR LFD+ P RD W+ +I+ Y+Q G EAL IF M
Sbjct: 4 NLFRITSKISALGSSGYIVHARKLFDEMPNRDTVAWNSMITSYSQLGFHQEALSIFYQMR 63
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL----SQSSIDIGQTHVVAALIDMNAK 160
N KPD + + +SAC+ G+ + + SS+ + + LIDM K
Sbjct: 64 NTNTKPDHFTFTATLSACAGAGSFPFGTKIHALVIILGYHSSLPVNNS-----LIDMYGK 118
Query: 161 C-------------------------------GNMDRANKLFEEMPKRDLFSYCSMIQGL 189
C G A+++F MP++ ++ +MI GL
Sbjct: 119 CFDAFSAGQVFKEMGDINEVSWCSLLFAYTNSGRFSEASEIFNLMPRKFEIAWNTMIAGL 178
Query: 190 SIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS-----------HGRLVEEGKHYFE 238
+G E + +F +M L PD ++ +++AC+ HG ++ G +
Sbjct: 179 GRYGEIELCLDMFREMRESLLEPDQWTYSALISACTESLEFLSGCMLHGLVIRSG--WSS 236
Query: 239 TMKSKYSMVPSPEHYACMVDLLS---------------------RSGQLKEAYELLKSMP 277
M++K S++ + + D L + G + EAY + +S+P
Sbjct: 237 AMEAKNSILSLYAKFGSLNDALKVVESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQSLP 296
Query: 278 VESHASAWGALLG--ACKFYGEVELGEIVA 305
E + +W +++ A YGE L VA
Sbjct: 297 -EKNIVSWTSMITGYARNGYGEEALRFFVA 325
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 120/249 (48%), Gaps = 36/249 (14%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N+++ K D +A +VF +M + + VS+ ++ Y G + A +F+ P++
Sbjct: 110 NSLIDMYGKCFDAFSAGQVFKEMGDINEVSWCSLLFAYTNSGRFSEASEIFNLMPRKFEI 169
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV----------GNL 128
W+ +I+G + G L +F+ M ++PD++ +L+SAC++ G +
Sbjct: 170 AWNTMIAGLGRYGEIELCLDMFREMRESLLEPDQWTYSALISACTESLEFLSGCMLHGLV 229
Query: 129 DLAKWVDCYLSQSSI------------------DIGQTHVVA--ALIDMNAKCGNMDRAN 168
+ W +++SI G+ V+ A+ID K G ++ A
Sbjct: 230 IRSGWSSAMEAKNSILSLYAKFGSLNDALKVVESTGRLTQVSWNAIIDAYMKVGYVNEAY 289
Query: 169 KLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS--- 225
+F+ +P++++ S+ SMI G + +GY E+A+ F M + +PD+ F +L ACS
Sbjct: 290 LMFQSLPEKNIVSWTSMITGYARNGYGEEALRFFVAMASNCFLPDDFTFGAVLHACSSLA 349
Query: 226 ---HGRLVE 231
HGR+V
Sbjct: 350 VLGHGRMVH 358
>30074.m001416 pentatricopeptide repeat-containing protein, putative
Length = 793
Score = 224 bits (570), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 135/400 (33%), Positives = 204/400 (51%), Gaps = 47/400 (11%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDL-----INARKVFDDMPERDV--VSFT---- 50
+A ++F P +N+ +NAM+ G ++ D+ A K+F M + + FT
Sbjct: 266 DAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSI 325
Query: 51 ---------------------------------VMIDGYAKVGDIASARALFDKAPKRDA 77
+I+ Y+ +G F+ PK D
Sbjct: 326 IKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDI 385
Query: 78 FLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY 137
W+ +I+GYAQNG AL +F + KPDE+I+ +++SAC+ V + V Y
Sbjct: 386 VSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGY 445
Query: 138 LSQSSIDIGQTHVVA-ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAE 196
++ I G +V + I M AK GN+D A FEE+ D+ S+ MI + HG+A+
Sbjct: 446 AVKTGI--GTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAK 503
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACM 256
A+ LF M + G+ P+ F +LTACSHG LVEEG Y+E+MK Y M + +H C+
Sbjct: 504 DAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCI 563
Query: 257 VDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENS 316
VDLLSR+G+L +A + + H W LL C+ Y ++ G+ VA +L EL+P+ S
Sbjct: 564 VDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQES 623
Query: 317 SPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
S YVLL +IY A L + ++ MK+RG+RK PG SWI
Sbjct: 624 SSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSWI 663
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 39/295 (13%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQN-----GLPNEALKI 99
D+V T ++D YAK G + A LF +P ++ +++ +I+G+ Q EALK+
Sbjct: 247 DIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKL 306
Query: 100 FQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNA 159
F M+ +KP ++ S++ C+ + + K + ++ + +I + + LI++ +
Sbjct: 307 FSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQ-SDEFIGSTLIELYS 365
Query: 160 KCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTV 219
G+ + K F PK D+ S+ +MI G + +G E A+ LF ++L G PD T
Sbjct: 366 LLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITT 425
Query: 220 ILTACS-----------HGRLVEEG-----------------KHYFETMKSKYSMVPSPE 251
+L+AC+ HG V+ G ++ K + + +P+
Sbjct: 426 MLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPD 485
Query: 252 --HYACMVDLLSRSGQLKEA---YELLKSMPVESHASAWGALLGACKFYGEVELG 301
++ M+ ++ G K+A +EL+KS + + + +L AC G VE G
Sbjct: 486 VVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEG 540
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 14/229 (6%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
Y+K G++ +A+ LFD+ +R +++LISGY G ++A+ +F + +K D++
Sbjct: 54 YSKWGEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSY 113
Query: 116 VSLMSACSQVGNLDLAKWVD-----CYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
++SAC Q+ + L K + C L Q Q + LIDM KC +D A L
Sbjct: 114 AGVLSACGQIKDFALGKVIHGLAIVCGLGQ------QVFLTNLLIDMYCKCERIDHARLL 167
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC--SHGR 228
FE + D S+ S+I G + G E+ + L KM + GL + L +C +
Sbjct: 168 FESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNN 227
Query: 229 LVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP 277
+V GK K + ++D+ +++G L +A +L ++ P
Sbjct: 228 MVSYGK-TLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSP 275
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 160/377 (42%), Gaps = 54/377 (14%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSF-------- 49
NA+++F +M ER++ S+N ++ G G A +F + + D S+
Sbjct: 62 NAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACG 121
Query: 50 ---------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
++ID Y K I AR LF+ + + D W+
Sbjct: 122 QIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNS 181
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGN--LDLAKWVDCYLSQ 140
LI+GYA+ G E LK+ M ++ + + + S + +C N + K + Y +
Sbjct: 182 LITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVK 241
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSI-----HGYA 195
+D+ V AL+DM AK G + A +LF P +++ Y +MI G A
Sbjct: 242 QGLDLDIV-VGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECA 300
Query: 196 EQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYAC 255
+A+ LF++M +G+ P + F+ I+ C+H E GK + K+++ +
Sbjct: 301 YEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHI-CKHNIQSDEFIGST 359
Query: 256 MVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPEN 315
+++L S G ++ + S P + +W ++ G+ E + +EL
Sbjct: 360 LIELYSLLGSTEDQLKCFNSTP-KLDIVSWTTMIAGYAQNGQFESALAL---FYELLASG 415
Query: 316 SSP--YVLLSSIYAAAD 330
P +++ + + A AD
Sbjct: 416 KKPDEFIITTMLSACAD 432
>29848.m004527 pentatricopeptide repeat-containing protein, putative
Length = 507
Score = 223 bits (569), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 196/361 (54%), Gaps = 10/361 (2%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
D A +F MP ++++S+N M+ G G+ + AR +FD M RD VS+ MI Y + G
Sbjct: 133 DYASNLFNSMPLKDISSFNIMISGYSTRGEAMLARSIFDSMEVRDFVSWNSMISAYIRAG 192
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
D+ ALF + P ++ W+ +I+G Q+ L +F+ M+ N PD + S++S
Sbjct: 193 DMEKGLALFREMPVKNTVTWNTMITGCLQSEHFGMVLDLFEEMKTANYIPDYLTVTSVLS 252
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
C +G+L + Y + + + HV ALIDM +KCG++++ +F + +D++
Sbjct: 253 TCGHLGSLGTGIKIHIYAIDNGL-VSSPHVTTALIDMYSKCGSIEQGLHVFCKSQVKDIY 311
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
+ ++I L++HG+ A+ +F KM + PD+ F I+ ACSH LV+EG F +M
Sbjct: 312 CWNALISALALHGHGYAALKVFGKMRKNHIQPDDITFIGIINACSHSGLVQEGCQLFVSM 371
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVEL 300
+ + + P EHY CMV+LL RSG L A +++++MP E S GALL AC Y ++E
Sbjct: 372 QEDFGISPKLEHYGCMVNLLGRSGHLALALQVIETMPFEPGESILGALLSACIIYQDLET 431
Query: 301 GEIVANRLFELEPENS-----SPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSW 355
GE R+ EL + ++ S++YA+ W + + + M G+ K G S
Sbjct: 432 GE----RVIELVCSKAHYLSDGELMMFSNLYASCGNWEEANRWREMMNSTGIVKTAGYSV 487
Query: 356 I 356
I
Sbjct: 488 I 488
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 13/249 (5%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T +++ Y + I A +F+ P +D W+ ++ YA N + A +F M L ++
Sbjct: 89 TALVNMYGNLHCIGDAFKVFEIMPVKDLIAWNSMLDAYASNAQMDYASNLFNSMPLKDIS 148
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
IM+ S S G LA+ + S+++ ++I + G+M++
Sbjct: 149 SFN-IMI---SGYSTRGEAMLARSI-----FDSMEVRDFVSWNSMISAYIRAGDMEKGLA 199
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH-GR 228
LF EMP ++ ++ +MI G + + LF +M IPD T +L+ C H G
Sbjct: 200 LFREMPVKNTVTWNTMITGCLQSEHFGMVLDLFEEMKTANYIPDYLTVTSVLSTCGHLGS 259
Query: 229 LVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGAL 288
L K + + + +V SP ++D+ S+ G +++ + V+ W AL
Sbjct: 260 LGTGIKIHIYAIDN--GLVSSPHVTTALIDMYSKCGSIEQGLHVFCKSQVKD-IYCWNAL 316
Query: 289 LGACKFYGE 297
+ A +G
Sbjct: 317 ISALALHGH 325
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 111/257 (43%), Gaps = 21/257 (8%)
Query: 73 PKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAK 132
P + W+ +I G +A+ + ++ + D Y L+ A ++ A
Sbjct: 11 PSSEVKKWNEIIRKQMHMGNGAQAILTYLKVQELGFHADNYTFPILLKAAGRI----CAS 66
Query: 133 WVDCYLSQSSIDIG---QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGL 189
+ L +I G V AL++M + A K+FE MP +DL ++ SM+
Sbjct: 67 KIGFALHGQTIKTGFCAHAFVQTALVNMYGNLHCIGDAFKVFEIMPVKDLIAWNSMLDAY 126
Query: 190 SIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPS 249
+ + + A LFN M + D ++F ++++ S + F++M+ V
Sbjct: 127 ASNAQMDYASNLFNSM----PLKDISSFNIMISGYSTRGEAMLARSIFDSME-----VRD 177
Query: 250 PEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLF 309
+ M+ R+G +++ L + MPV++ + W ++ C + E +V +
Sbjct: 178 FVSWNSMISAYIRAGDMEKGLALFREMPVKNTVT-WNTMITGCL---QSEHFGMVLDLFE 233
Query: 310 ELEPENSSP-YVLLSSI 325
E++ N P Y+ ++S+
Sbjct: 234 EMKTANYIPDYLTVTSV 250
>30174.m009150 pentatricopeptide repeat-containing protein, putative
Length = 800
Score = 223 bits (567), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/306 (38%), Positives = 186/306 (60%), Gaps = 4/306 (1%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+ID Y+K G + A +FD+ + W+ +I G++Q G EA+++F M L + +
Sbjct: 442 LIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMN 501
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
E ++ + ACS +G+L+ KW+ L + + ALIDM AKCG++ A+++F
Sbjct: 502 EVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVK-KDLFIDTALIDMYAKCGDLRIAHRVF 560
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
+ M +R + S+ +MI G +HG + A+ LF +M+ + P++ F IL+ACSH VE
Sbjct: 561 DSMSERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQREMKPNDITFMNILSACSHSGYVE 620
Query: 232 EGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
EGK YF +MK+ + + P+ EH+ACMVDLLSR+G L EAY ++ SMP + AS WGALL
Sbjct: 621 EGKFYFNSMKN-FEVEPNLEHFACMVDLLSRAGDLDEAYRIINSMPFPAEASIWGALLNG 679
Query: 292 CKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSH-VKNKMKERGLRKL 350
C+ + +++ + L ++ +++ Y LLS+IYA W DVS V++ MK GL+K+
Sbjct: 680 CRIHQRMDMIRNIERDLLDMRTDDTGYYTLLSNIYAEEGNW-DVSRKVRSAMKGIGLKKV 738
Query: 351 PGCSWI 356
PG S I
Sbjct: 739 PGYSTI 744
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 156/337 (46%), Gaps = 43/337 (12%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV--SFTVM------- 52
+A+R+F M R++ SW AM+ + A +VF +M E V + T+M
Sbjct: 253 SAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCA 312
Query: 53 ------------------------------IDGYAKVGDIASARALFDKAPKRDAFLWSV 82
I+ YA+ G ++ + KR+ W++
Sbjct: 313 GFNLLREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNM 372
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
LIS YA GL EAL IF M+ PD + + S +SAC+ VG L L + Y +
Sbjct: 373 LISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKRH 432
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
I V +LIDM +KCG++D A +F+ + + + ++ SMI G S G + +A+ LF
Sbjct: 433 --ILDEFVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLF 490
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
++M L + F + ACSH +E+GK + + Y + ++D+ ++
Sbjct: 491 DQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIA-YGVKKDLFIDTALIDMYAK 549
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
G L+ A+ + SM E +W A++G C +G+++
Sbjct: 550 CGDLRIAHRVFDSMS-ERSVVSWSAMIGGCGMHGDID 585
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 102/191 (53%), Gaps = 3/191 (1%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D V T ++ Y +G +++A+ +FD RD WS +IS Y NG +E L++F+ +
Sbjct: 133 DHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLV 192
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVD-CYLSQSSIDIGQTHVVAALIDMNAKCGN 163
+V+ D M+S+ AC ++G L LAK V C + Q G + AL+ M ++C +
Sbjct: 193 SQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLN--DALVLMYSRCDD 250
Query: 164 MDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
A ++F M R + S+ +MI + + +QA+ +F +ML + P+ +L++
Sbjct: 251 FSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSS 310
Query: 224 CSHGRLVEEGK 234
C+ L+ EGK
Sbjct: 311 CAGFNLLREGK 321
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 152/332 (45%), Gaps = 45/332 (13%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV--SFTVM-IDG--- 55
NAK+VF M R+L SW++++ V G+ ++F + +DV S T++ I G
Sbjct: 152 NAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVELDSVTMLSIAGACG 211
Query: 56 ---------------------------------YAKVGDIASARALFDKAPKRDAFLWSV 82
Y++ D +SA +F R W+
Sbjct: 212 ELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERIFSNMFNRSIASWTA 271
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+IS Y ++ +AL++F M V P+ +++++S+C+ L K V CY +
Sbjct: 272 MISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLLREGKSVHCY-AVKH 330
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
ID+ + ALI+ A+ G + K+ + KR++ S+ +I + G ++A+G+F
Sbjct: 331 IDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVYASQGLFKEALGIF 390
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
+M +G IPD+ + + ++AC++ L+ G ++ + ++ ++D+ S+
Sbjct: 391 VQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKRHILDEFVQN--SLIDMYSK 448
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKF 294
G + AY + + +S AW +++ C F
Sbjct: 449 CGHVDLAYLIFDRIQSKS-VVAWNSMI--CGF 477
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 118/241 (48%), Gaps = 5/241 (2%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T +I+ Y+++G + S++ +F+ D+F+W+VLI + + EA+ ++ M +
Sbjct: 37 TKLIESYSQIGCLQSSKLVFETFQNPDSFMWAVLIKCHVWSNFCGEAISLYNKMIYKQIP 96
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVV-AALIDMNAKCGNMDRAN 168
++I S++ AC+ GNLD+ + V + + +D+ HVV +L+ M G + A
Sbjct: 97 ISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYGLDV--DHVVETSLLGMYGDLGCLSNAK 154
Query: 169 KLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGR 228
K+F+ M RDL S+ S+I +G + + + +F ++++ + D+ I AC
Sbjct: 155 KVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVELDSVTMLSIAGACGELG 214
Query: 229 LVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGAL 288
+ K + + P + A +V + SR A + +M S AS W A+
Sbjct: 215 FLRLAKSVHGCIIRQRIETRGPLNDA-LVLMYSRCDDFSSAERIFSNMFNRSIAS-WTAM 272
Query: 289 L 289
+
Sbjct: 273 I 273
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 97/214 (45%), Gaps = 40/214 (18%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------------------- 41
D A +F ++ +++ +WN+M+ G + G+ + A ++FD M
Sbjct: 453 DLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQAC 512
Query: 42 --------------------PERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
++D+ T +ID YAK GD+ A +FD +R WS
Sbjct: 513 SHMGHLEKGKWLHHKLIAYGVKKDLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSWS 572
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I G +G + A+ +F M +KP++ ++++SACS G ++ K+ +
Sbjct: 573 AMIGGCGMHGDIDAAISLFAEMIQREMKPNDITFMNILSACSHSGYVEEGKFYFNSMKNF 632
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
++ H A ++D+ ++ G++D A ++ MP
Sbjct: 633 EVEPNLEH-FACMVDLLSRAGDLDEAYRIINSMP 665
>30115.m001175 pentatricopeptide repeat-containing protein, putative
Length = 611
Score = 222 bits (566), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 202/399 (50%), Gaps = 48/399 (12%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVS------------ 48
D A V Q+ + N+ SW ++ K G+ + +VF DM R+VVS
Sbjct: 214 DEAWEVLKQIEQPNIISWTTLISSYSKIGEHDMSLRVFQDMIIREVVSPDLDCLCSVLVS 273
Query: 49 ------------------------------FTVMIDGYAKVGDIASARALFDKAPKRDAF 78
++ YAK G I A +F+ K D
Sbjct: 274 CRHIGALRSGKEIHGYGTKMETNTVFYSSAGAALLTMYAKCGRIQDAINVFELMDKSDIV 333
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACS-QVGNLDLAKWVDCY 137
W+ +I G+ + L +A++ F+ M+ M++K D+ + +++ C Q GN + Y
Sbjct: 334 TWNAMILGFVELDLGKQAIECFREMQRMDIKNDQTTISTILPVCDLQYGNP-----IHAY 388
Query: 138 LSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQ 197
+ +S V A+I M KCG + A +F MP +D+ S+ +MI G +HG+ +
Sbjct: 389 VRKSITLSSVVTVWNAVIHMYCKCGCVRSAYTIFCSMPNKDVVSWNTMIGGFGMHGHGQA 448
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMV 257
A+ L +M+ G+ P++ FT +L+ACSH LV+EG F +M YS+ P EHY+C+V
Sbjct: 449 ALKLLKEMILSGIFPNSTTFTSVLSACSHSGLVDEGFRLFRSMTEDYSITPRMEHYSCIV 508
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSS 317
D+L+R+GQ +A + MP+E S WGALL AC+ Y ++ G + A +L +EP+ +
Sbjct: 509 DMLARAGQFADAVTFIHKMPLEPDKSIWGALLAACRAYQNLDFGRLAAEQLIRMEPKCAG 568
Query: 318 PYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
YV LS+IYA A +W D V+ +++ +GL K G S I
Sbjct: 569 HYVTLSNIYARAGRWDDAGRVRKEIEGKGLVKPSGQSLI 607
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 165/336 (49%), Gaps = 23/336 (6%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGG------DLINARKVFDDMPERDVVSFTVMIDG 55
+A+ VF +M ER+L SWN+M+ G V G +L+N ++ D E DVV++ ++D
Sbjct: 149 SARLVFEEMEERDLFSWNSMISGYVSNGLADLAVELLNCMRL--DGFEPDVVTWNTLMDA 206
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN-VKPDEYI 114
Y ++G A + + + + W+ LIS Y++ G + +L++FQ M + V PD
Sbjct: 207 YCQMGRFDEAWEVLKQIEQPNIISWTTLISSYSKIGEHDMSLRVFQDMIIREVVSPDLDC 266
Query: 115 MVSLMSACSQVGNLDLAKWVDCYLSQSSID-IGQTHVVAALIDMNAKCGNMDRANKLFEE 173
+ S++ +C +G L K + Y ++ + + + AAL+ M AKCG + A +FE
Sbjct: 267 LCSVLVSCRHIGALRSGKEIHGYGTKMETNTVFYSSAGAALLTMYAKCGRIQDAINVFEL 326
Query: 174 MPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEG 233
M K D+ ++ +MI G +QA+ F +M + D + IL C ++ G
Sbjct: 327 MDKSDIVTWNAMILGFVELDLGKQAIECFREMQRMDIKNDQTTISTILPVCD----LQYG 382
Query: 234 KHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACK 293
++ ++ + ++ + + G ++ AY + SMP + S W ++G
Sbjct: 383 NPIHAYVRKSITLSSVVTVWNAVIHMYCKCGCVRSAYTIFCSMPNKDVVS-WNTMIGGFG 441
Query: 294 FYGEVE-----LGEIVANRLFELEPENSSPYVLLSS 324
+G + L E++ + +F P +++ +LS+
Sbjct: 442 MHGHGQAALKLLKEMILSGIF---PNSTTFTSVLSA 474
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 147/312 (47%), Gaps = 21/312 (6%)
Query: 44 RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM 103
+D T +I YA + SA+ LFDK P+ + + W+ + Y ++G+ ++ ++ + M
Sbjct: 28 KDPFMLTKLIQMYADCDHLFSAQRLFDKMPQPNVYAWTAIFGFYLRHGMYDKCVQNYGFM 87
Query: 104 ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG---QTHVVAALIDMNAK 160
+ +V PD Y+ ++ AC+Q+ + W+ + I G V +LIDM K
Sbjct: 88 KYSDVLPDNYVFPKVLRACTQLLWFEGGIWI----HKDVIVCGCESNLQVCNSLIDMYVK 143
Query: 161 CGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVI 220
CGN A +FEEM +RDLFS+ SMI G +G A+ AV L N M +G PD + +
Sbjct: 144 CGNARSARLVFEEMEERDLFSWNSMISGYVSNGLADLAVELLNCMRLDGFEPDVVTWNTL 203
Query: 221 LTA-CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVE 279
+ A C GR E +E +K P+ + ++ S+ G+ + + + M +
Sbjct: 204 MDAYCQMGRFDEA----WEVLKQIEQ--PNIISWTTLISSYSKIGEHDMSLRVFQDMIIR 257
Query: 280 SHAS----AWGALLGACKFYGEVELGEIVANRLFELEPEN---SSPYVLLSSIYAAADQW 332
S ++L +C+ G + G+ + ++E SS L ++YA +
Sbjct: 258 EVVSPDLDCLCSVLVSCRHIGALRSGKEIHGYGTKMETNTVFYSSAGAALLTMYAKCGRI 317
Query: 333 LDVSHVKNKMKE 344
D +V M +
Sbjct: 318 QDAINVFELMDK 329
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 146/342 (42%), Gaps = 81/342 (23%)
Query: 2 NAKRVFVQMPERNLTSWNAMVG---------------GLVKGGDLINARKVFDDM----- 41
+A+R+F +MP+ N+ +W A+ G G +K D++ VF +
Sbjct: 48 SAQRLFDKMPQPNVYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACT 107
Query: 42 ----------PERDVVSFTV---------MIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+DV+ +ID Y K G+ SAR +F++ +RD F W+
Sbjct: 108 QLLWFEGGIWIHKDVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNS 167
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+ISGY NGL + A+++ M L +PD +LM A Q+G D A V + Q +
Sbjct: 168 MISGYVSNGLADLAVELLNCMRLDGFEPDVVTWNTLMDAYCQMGRFDEAWEVLKQIEQPN 227
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
I I T LI +K G D + ++F++M R++ S
Sbjct: 228 I-ISWT----TLISSYSKIGEHDMSLRVFQDMIIREVVS--------------------- 261
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDLL 260
PD +L +C H + GK H + T K + + V A ++ +
Sbjct: 262 ---------PDLDCLCSVLVSCRHIGALRSGKEIHGYGT-KMETNTVFYSSAGAALLTMY 311
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGE 302
++ G++++A + + M +S W A++ + E++LG+
Sbjct: 312 AKCGRIQDAINVFELMD-KSDIVTWNAMILG---FVELDLGK 349
>30128.m009048 pentatricopeptide repeat-containing protein, putative
Length = 716
Score = 221 bits (564), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 210/395 (53%), Gaps = 40/395 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV--SFT-------- 50
++ RVF +MP+ ++ W+ M+ + A ++F M V+ FT
Sbjct: 194 NDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSC 253
Query: 51 -----------------------------VMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
++D YAK G + ++ LF + P R+ W+
Sbjct: 254 ASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWN 313
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I GY Q+G ++AL +++ M V+ E S++ AC+ + ++L + LS
Sbjct: 314 TMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHS-LSLK 372
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+I V ALIDM AKCG++ A +F+ + +RD S+ +MI G S+HG +A+
Sbjct: 373 TIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKA 432
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F M +P+ F IL+ACS+ L++ G++YF++M Y + P EHY CMV LL
Sbjct: 433 FQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLG 492
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVL 321
RSG L +A +L++ +P+E + W ALLGAC + +V+LG + A ++ +++P++ + +VL
Sbjct: 493 RSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVL 552
Query: 322 LSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
LS+IYA +W V+ V+ MK +G++K PG SWI
Sbjct: 553 LSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWI 587
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 133/260 (51%), Gaps = 11/260 (4%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
E D+ ++D Y K GD +F++ PK D WS +IS YAQ+ EA+++F
Sbjct: 174 EMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQ 233
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
M V P+++ S++ +C+ + NL L K V C++ + +D G V AL+D+ AKCG
Sbjct: 234 MRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLD-GNVFVSNALMDVYAKCG 292
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
+D + KLF E+P R+ ++ +MI G G ++A+ L+ ML + ++ +L
Sbjct: 293 RLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLR 352
Query: 223 ACSHGRLVEEGKHY----FETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPV 278
AC+ +E G +T+ K +V + ++D+ ++ G +K A L+ M
Sbjct: 353 ACASLAAMELGTQIHSLSLKTIYDKDVVVGNA-----LIDMYAKCGSIKNA-RLVFDMLS 406
Query: 279 ESHASAWGALLGACKFYGEV 298
E +W A++ +G V
Sbjct: 407 ERDEISWNAMISGYSMHGLV 426
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 118/244 (48%), Gaps = 11/244 (4%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T +ID YA G + SAR FD +D W+ +++ YA+N ++L++F M ++
Sbjct: 80 TALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFN 139
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
P+ + ++ AC + + K V + ++ ++ +V L+D+ K G+ + +
Sbjct: 140 PNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEM-DLYVGVGLLDLYTKFGDANDVLR 198
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
+FEEMPK D+ + MI + + +AV LF +M ++P+ F +L +C+
Sbjct: 199 VFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIEN 258
Query: 230 VEEGK----HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAW 285
++ GK H + V + ++D+ ++ G+L + +L +P + + W
Sbjct: 259 LQLGKQVHCHVLKVGLDGNVFVSNA-----LMDVYAKCGRLDNSMKLFMELPNRNEVT-W 312
Query: 286 GALL 289
++
Sbjct: 313 NTMI 316
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 73 PKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAK 132
P R+ + LI GY Q+ +E + +F + + + ++ +++ V +LA
Sbjct: 2 PDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAY 61
Query: 133 WVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIH 192
+ + + + V ALID A CG+++ A + F+ + +D+ S+ M+ + +
Sbjct: 62 SLHACIYKLGHE-SNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 193 GYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE-TMKSKYSMVPSPE 251
+ ++ LF +M G P++ F +L AC GK +K+ Y M +
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEM----D 176
Query: 252 HY--ACMVDLLSRSGQLKEAYELLKSMP 277
Y ++DL ++ G + + + MP
Sbjct: 177 LYVGVGLLDLYTKFGDANDVLRVFEEMP 204
>29628.m000765 pentatricopeptide repeat-containing protein, putative
Length = 518
Score = 219 bits (559), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/267 (40%), Positives = 173/267 (64%), Gaps = 2/267 (0%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A+ +F +MPER+ SWN+M+ G V GD+ A+K+FD+MP RDVVS+ MIDGYAK+ ++
Sbjct: 241 ARELFDEMPERDAFSWNSMISGYVGAGDVEAAKKLFDNMPSRDVVSWNCMIDGYAKIRNV 300
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM-ELMNVKPDEYIMVSLMSA 121
+ AR LF++ P R+ W+++++ Y + E LK+F M E ++P++ ++S+++A
Sbjct: 301 SVARWLFNQMPFRNIVSWNIMLALYLKCKNYGECLKLFDRMIEERELRPNKASLMSVLTA 360
Query: 122 CSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS 181
C+ LDL KW+ Y+ + ++ + + AL+ M AKCG MD A +F +MP + + S
Sbjct: 361 CANFRRLDLGKWIHSYIKDNEVESDEL-LSTALLTMYAKCGMMDFARHIFTKMPHKSVVS 419
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
+ SMI G +I+G+AE+A+ F +M ++P+ A F +L+ACSH L+ EG YF+ M+
Sbjct: 420 WNSMIMGYAINGHAEKALETFLEMEKSSMMPNAATFVSVLSACSHAELLLEGWWYFDLMQ 479
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQLKE 268
KY + P EH CMVDLL ++ + E
Sbjct: 480 RKYKIEPKVEHCGCMVDLLRQAEAVLE 506
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 122/260 (46%), Gaps = 16/260 (6%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
E D ++ Y+ G + AR LF+ D W+ +I GY +NG A ++F
Sbjct: 188 EFDAYVRNSLLHMYSACGRVLDARLLFESGFVLDLVSWNSMIIGYVKNGDIGLARELFDE 247
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
M + D + S++S G+++ AK + + S D+ + +ID AK
Sbjct: 248 MP----ERDAFSWNSMISGYVGAGDVEAAK--KLFDNMPSRDVVSWN---CMIDGYAKIR 298
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQ-GLSIHGYAEQAVGLFNKMLNEG-LIPDNAAFTVI 220
N+ A LF +MP R++ S+ M+ L Y E + LF++M+ E L P+ A+ +
Sbjct: 299 NVSVARWLFNQMPFRNIVSWNIMLALYLKCKNYGE-CLKLFDRMIEERELRPNKASLMSV 357
Query: 221 LTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYAC-MVDLLSRSGQLKEAYELLKSMPVE 279
LTAC++ R ++ GK +K + V S E + ++ + ++ G + A + MP +
Sbjct: 358 LTACANFRRLDLGKWIHSYIKD--NEVESDELLSTALLTMYAKCGMMDFARHIFTKMPHK 415
Query: 280 SHASAWGALLGACKFYGEVE 299
S S W +++ G E
Sbjct: 416 SVVS-WNSMIMGYAINGHAE 434
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 118/272 (43%), Gaps = 27/272 (9%)
Query: 68 LFDKAPKRDAFLWSVLISGYAQ-NGLPNEALKIFQGMELMN-VKPDEYIMVSLMSACSQV 125
L+D + DAF+ + +I + N P AL+ + + V P+ Y L+ C+ +
Sbjct: 110 LYDYIEQPDAFICNTIIRCFVSLNNDPFGALRFYYDKMIAKWVLPNRYTFPLLVKVCADI 169
Query: 126 GNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSM 185
G+L + + + + +V +L+ M + CG + A LFE DL S+ SM
Sbjct: 170 GSLKEGQKAHACVVKFGFEF-DAYVRNSLLHMYSACGRVLDARLLFESGFVLDLVSWNSM 228
Query: 186 IQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFT--VILTACSHGRLVEEGKHYFETMKSK 243
I G +G A LF++M P+ AF+ +++ VE K F+ M S+
Sbjct: 229 IIGYVKNGDIGLARELFDEM------PERDAFSWNSMISGYVGAGDVEAAKKLFDNMPSR 282
Query: 244 YSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLG---ACKFYGEV-- 298
+ CM+D ++ + A L MP + S W +L CK YGE
Sbjct: 283 -----DVVSWNCMIDGYAKIRNVSVARWLFNQMPFRNIVS-WNIMLALYLKCKNYGECLK 336
Query: 299 ELGEIVANRLFELEPENSSPYVLLSSIYAAAD 330
++ R EL P +S L+S + A A+
Sbjct: 337 LFDRMIEER--ELRPNKAS---LMSVLTACAN 363
>30131.m006928 pentatricopeptide repeat-containing protein, putative
Length = 480
Score = 218 bits (554), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 168/271 (61%), Gaps = 1/271 (0%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N ++ K GDL ARK+FD M R VVS+T + G G++ +ARA FD+ P R+
Sbjct: 169 NTLMDLYFKCGDLDYARKLFDKMAVRSVVSWTTFVAGLVACGELDTARAAFDEMPMRNVV 228
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ +I+GY +N P EA ++FQ M+L NV+P+ + +V L+ AC+++G+L+L + + Y
Sbjct: 229 SWTAMINGYVKNQRPQEAFELFQRMQLANVRPNGFTLVGLLRACTELGSLELGRRIHEYA 288
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
++ +G + ALIDM +KCG+++ A K+FEEM K+ L ++ SMI L +HG+ ++A
Sbjct: 289 LENGFKVG-VFLGTALIDMYSKCGSIEDAKKVFEEMQKKSLATWNSMITSLGVHGFGKEA 347
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+ LF +M + PD F +L AC + VE G YF+ M Y + P EHY CM++
Sbjct: 348 LALFAQMEEANVRPDAITFVGVLFACVNTNNVEAGYRYFKYMTEHYGITPMLEHYTCMIE 407
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALL 289
L +R+ L E EL+ SMP++ +++ AL+
Sbjct: 408 LYTRAAMLNEVSELVNSMPMKLNSNPAAALV 438
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 119/285 (41%), Gaps = 37/285 (12%)
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
A +FD+ F W+ +I Y NG +AL ++ M PD++ ++ AC
Sbjct: 83 ATLIFDQIQNPHTFTWNFMIRAYNYNGNSQQALLLYNLMICEGFSPDKFTFPFVIKACLD 142
Query: 125 VGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL-------------- 170
LD K V + ++ T + L+D+ KCG++D A KL
Sbjct: 143 HSALDKGKEVHGFAIKTGF-WKDTFLSNTLMDLYFKCGDLDYARKLFDKMAVRSVVSWTT 201
Query: 171 -----------------FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPD 213
F+EMP R++ S+ +MI G + ++A LF +M + P+
Sbjct: 202 FVAGLVACGELDTARAAFDEMPMRNVVSWTAMINGYVKNQRPQEAFELFQRMQLANVRPN 261
Query: 214 NAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELL 273
+L AC+ +E G+ E V A ++D+ S+ G +++A ++
Sbjct: 262 GFTLVGLLRACTELGSLELGRRIHEYALENGFKVGVFLGTA-LIDMYSKCGSIEDAKKVF 320
Query: 274 KSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
+ M +S A+ W +++ + +G G+ ++E N P
Sbjct: 321 EEMQKKSLAT-WNSMITSLGVHG---FGKEALALFAQMEEANVRP 361
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 164 MDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
+D A +F+++ F++ MI+ + +G ++QA+ L+N M+ EG PD F ++ A
Sbjct: 80 VDYATLIFDQIQNPHTFTWNFMIRAYNYNGNSQQALLLYNLMICEGFSPDKFTFPFVIKA 139
Query: 224 CSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESH 281
C +++GK H F K ++DL + G L A +L M V S
Sbjct: 140 CLDHSALDKGKEVHGFAI---KTGFWKDTFLSNTLMDLYFKCGDLDYARKLFDKMAVRSV 196
Query: 282 ASAWGALLGACKFYGEVE 299
S W + GE++
Sbjct: 197 VS-WTTFVAGLVACGELD 213
>30174.m009061 pentatricopeptide repeat-containing protein, putative
Length = 319
Score = 215 bits (547), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 111/323 (34%), Positives = 190/323 (58%), Gaps = 11/323 (3%)
Query: 41 MPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIF 100
MPER+ +++ MI GY++ G+I ARA F++ P RD WS +I+ Y +G + L +F
Sbjct: 1 MPERNTITWNTMITGYSRSGNIDKARAFFEEMPLRDVGSWSAMITAYINHGRWDRGLLLF 60
Query: 101 QGMELMN---VKPDEYIMVSLMSACSQVGNLDL--AKWVDCYLSQSSIDIGQTHVVAALI 155
+ E+M +KPD+ + +++S C+ +G L L K ++ ++ ++ + L+
Sbjct: 61 R--EMMTNSELKPDQVTVGTVLSGCTHMGFLGLLVGKSAHGFIMKNRWEL-NVEIGTVLV 117
Query: 156 DMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNA 215
DM KCG + A ++F+ M +R++ ++ ++I G + HGY+E+ + LFN M + P+
Sbjct: 118 DMYVKCGYLKNAIRVFDLMKERNVMTWTALICGAAQHGYSEETLSLFNMMQEAKIRPNEL 177
Query: 216 AFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKS 275
FT IL C+H LVEEGK YF M +Y + +HY CMVDL ++G L EAY ++K+
Sbjct: 178 TFTGILNVCAHSGLVEEGKKYFR-MIEEYGLERRIQHYGCMVDLFGKAGLLDEAYNVIKT 236
Query: 276 MPVESHASAWGALLGACKFYGEVELGEIVANRLFE-LEPENSSP-YVLLSSIYAAADQWL 333
M VE++ WG+ L ACK + + ++ E V ++ + ++PEN Y L+ +Y + ++W
Sbjct: 237 MKVENNVVIWGSFLSACKEHKKFDMAERVIEQVLKVIKPENDGGIYTLVCDLYTSNEKWD 296
Query: 334 DVSHVKNKMKERGLRKLPGCSWI 356
D V+ M + +RK G S+I
Sbjct: 297 DAERVRKLMLNQNVRKARGSSFI 319
>29805.m001519 pentatricopeptide repeat-containing protein, putative
Length = 501
Score = 214 bits (544), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 175/305 (57%), Gaps = 2/305 (0%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I Y K G + +A LF + P R+ W+ +ISG+AQ + L++F M +KP+
Sbjct: 147 LITLYGKCGKLDNAHKLFHEMPVRNVVTWTAIISGFAQECQVDVCLELFSVMRNSTLKPN 206
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
++ SL+SAC+ G L C + Q HV ALI M K G++ A +F
Sbjct: 207 DFTFTSLLSACTGSGALGQGTSAHCQIIQMGFH-SYLHVANALISMYCKSGSVHDAFYIF 265
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
+ +D+ S+ SMI G + HG A QA+ LF KM G+ PD+ F +L+AC H V+
Sbjct: 266 NNIYSKDIVSWNSMISGYAQHGLAMQAIDLFEKMTKLGVKPDSITFLGVLSACRHAGFVQ 325
Query: 232 EGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
G++YF +M +Y + P +HY+C+VDLL R+G ++EA +++ MP+ +A WG+LL +
Sbjct: 326 GGRNYFNSM-VEYHLRPQLDHYSCLVDLLGRAGLIEEALDIILRMPILPNAVIWGSLLSS 384
Query: 292 CKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLP 351
C+ +G V +G A + LEP ++ +V L+++YA+ W + V+ MK+ GL+ P
Sbjct: 385 CRLHGSVWIGIQAAEQRLLLEPACAATHVQLANLYASVRYWDKAAKVRKVMKDTGLKTNP 444
Query: 352 GCSWI 356
G SWI
Sbjct: 445 GYSWI 449
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 35/212 (16%)
Query: 138 LSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQ 197
L+ +S I ++V ++LI + KCG +D A+KLF EMP R++ ++ ++I G + +
Sbjct: 131 LAITSGFISNSYVGSSLITLYGKCGKLDNAHKLFHEMPVRNVVTWTAIISGFAQECQVDV 190
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILTACS-----------HGRLVEEGKH-YFETMKSKYS 245
+ LF+ M N L P++ FT +L+AC+ H ++++ G H Y + S
Sbjct: 191 CLELFSVMRNSTLKPNDFTFTSLLSACTGSGALGQGTSAHCQIIQMGFHSYLHVANALIS 250
Query: 246 M----------------VPSPE--HYACMVDLLSRSGQLKEAYELLKSMP---VESHASA 284
M + S + + M+ ++ G +A +L + M V+ +
Sbjct: 251 MYCKSGSVHDAFYIFNNIYSKDIVSWNSMISGYAQHGLAMQAIDLFEKMTKLGVKPDSIT 310
Query: 285 WGALLGACKFYGEVELGEIVANRLFE--LEPE 314
+ +L AC+ G V+ G N + E L P+
Sbjct: 311 FLGVLSACRHAGFVQGGRNYFNSMVEYHLRPQ 342
>29799.m000650 pentatricopeptide repeat-containing protein, putative
Length = 757
Score = 213 bits (543), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 206/394 (52%), Gaps = 42/394 (10%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGG----------------------DLINARKVFD 39
+A VF +MP RN SWN+++ GL+ L+N ++
Sbjct: 319 SAFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTEGIEADEVTLVNCLQICK 378
Query: 40 DMP-----------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
E + + +ID YAK I A +F + +RD LWS
Sbjct: 379 YFAHPYHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLIELAWEVFSRTRRRDVVLWST 438
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+I+G+A G P+EA+ +FQ M P+ +++L+ ACS L + W +
Sbjct: 439 MIAGFAHCGKPDEAIAVFQKMNEGIEVPNAVTIINLLQACSVSAELKRSMWAHGAAIRRG 498
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ + V A++DM +KCG ++ + K F ++P++++ ++ +MI ++G A +A+ L
Sbjct: 499 LA-AEVAVGTAIVDMYSKCGEIEASRKAFNQIPQKNIITWSTMIAAYGMNGLAHEALALL 557
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
+M + + P+ + +LTACSHG LVE G F++M + + P EHY+CMVD+LSR
Sbjct: 558 AQMKSHEIKPNALTYLSVLTACSHGGLVEMGLSVFKSMIQDHGVDPEFEHYSCMVDMLSR 617
Query: 263 SGQLKEAYELLKSMP--VESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYV 320
+G+L +A EL++ MP + AS WGALL AC+ Y LGE ++ ELEP N + Y+
Sbjct: 618 AGKLDDAMELIRMMPETFRAGASVWGALLSACRTYRSSTLGEKAVYQVLELEPLNLAGYL 677
Query: 321 LLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCS 354
L SS+YA+ W + + +K +ERG+R + G S
Sbjct: 678 LASSMYASDGLWDNAARMKLLARERGVRAVAGYS 711
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 149/343 (43%), Gaps = 67/343 (19%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM-------PE---------- 43
D A+ +F +MPE+++ SW+AM+GG V+ + ++F M P+
Sbjct: 216 DCARILFDEMPEKDVISWSAMIGGYVQYLEDQIGLQIFQKMLSTSRITPDGVILVSVLKA 275
Query: 44 ----------RDVVSFTV-------------MIDGYAKVGDIASARALFDKAPKRDAFLW 80
R V T+ +ID Y+K D SA +F + P+R+ W
Sbjct: 276 CANSVNITMGRLVHGLTICRGLDSDLFVKNSLIDMYSKCKDAGSAFEVFSEMPRRNNVSW 335
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ L+SG N +EAL + M ++ DE +V+ + C + K V C +
Sbjct: 336 NSLLSGLILNKKYSEALLLVYSMRTEGIEADEVTLVNCLQICKYFAHPYHCKAVHCATIR 395
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
+ + V+ +LID AKC ++ A ++F +RD+ + +MI G + G ++A+
Sbjct: 396 RGCESNEI-VLNSLIDAYAKCNLIELAWEVFSRTRRRDVVLWSTMIAGFAHCGKPDEAIA 454
Query: 201 LFNKMLNEGL-IPDNAAFTVILTACS-----------HGRLVEEGKHYFETMKSKYSMVP 248
+F KM NEG+ +P+ +L ACS HG + G +
Sbjct: 455 VFQKM-NEGIEVPNAVTIINLLQACSVSAELKRSMWAHGAAIRRG------------LAA 501
Query: 249 SPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
+VD+ S+ G+++ + + +P + + W ++ A
Sbjct: 502 EVAVGTAIVDMYSKCGEIEASRKAFNQIP-QKNIITWSTMIAA 543
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 114/266 (42%), Gaps = 42/266 (15%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDG- 55
D A VF M R+ SWN ++ G + G L+ F + E ++ + +++
Sbjct: 116 DTAVSVFDSMRSRDSVSWNVLIHGCLDYGALVEGLWQFINARVAGFEPNISTLVLLVQAC 175
Query: 56 ----------------------------------YAKVGDIASARALFDKAPKRDAFLWS 81
YA V D+ AR LFD+ P++D WS
Sbjct: 176 RSLRAKQEGLQLHGYLIQSGLWASWSVQNSFLCMYADV-DMDCARILFDEMPEKDVISWS 234
Query: 82 VLISGYAQNGLPNEALKIFQGM-ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+I GY Q L+IFQ M + PD I+VS++ AC+ N+ + + V
Sbjct: 235 AMIGGYVQYLEDQIGLQIFQKMLSTSRITPDGVILVSVLKACANSVNITMGRLVHGLTIC 294
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
+D V +LIDM +KC + A ++F EMP+R+ S+ S++ GL ++ +A+
Sbjct: 295 RGLD-SDLFVKNSLIDMYSKCKDAGSAFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALL 353
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSH 226
L M EG+ D L C +
Sbjct: 354 LVYSMRTEGIEADEVTLVNCLQICKY 379
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 116/247 (46%), Gaps = 21/247 (8%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+++ Y K G++ +A ++FD RD+ W+VLI G G E L F + +P+
Sbjct: 105 ILNFYIKCGELDTAVSVFDSMRSRDSVSWNVLIHGCLDYGALVEGLWQFINARVAGFEPN 164
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
+V L+ AC + + YL QS + V + + M A +MD A LF
Sbjct: 165 ISTLVLLVQACRSLRAKQEGLQLHGYLIQSGL-WASWSVQNSFLCMYADV-DMDCARILF 222
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGL--FNKMLNEGLI-PDNAAFTVILTACSH-- 226
+EMP++D+ S+ +MI G Y E +GL F KML+ I PD +L AC++
Sbjct: 223 DEMPEKDVISWSAMIGGYV--QYLEDQIGLQIFQKMLSTSRITPDGVILVSVLKACANSV 280
Query: 227 ----GRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHA 282
GRLV G + S + S ++D+ S+ A+E+ MP ++
Sbjct: 281 NITMGRLV-HGLTICRGLDSDLFVKNS------LIDMYSKCKDAGSAFEVFSEMPRRNNV 333
Query: 283 SAWGALL 289
S W +LL
Sbjct: 334 S-WNSLL 339
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 111/261 (42%), Gaps = 22/261 (8%)
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM-VSL----MSACSQVGNLDLAKWV 134
W++ I + N +E I Q E+ N +++ V+L + ACS + +D K +
Sbjct: 30 WTLRIKELSSNEKWHEV--ISQYYEITNAGISHHLLDVTLFPPVLKACSYLSYID-GKCL 86
Query: 135 DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGY 194
L +++ D T + ++++ KCG +D A +F+ M RD S+ +I G +G
Sbjct: 87 HACLIKTAFD-SFTSIGNSILNFYIKCGELDTAVSVFDSMRSRDSVSWNVLIHGCLDYGA 145
Query: 195 AEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEG--KHYFETMKSKYSMVPSPEH 252
+ + F G P+ + +++ AC R +EG H + ++
Sbjct: 146 LVEGLWQFINARVAGFEPNISTLVLLVQACRSLRAKQEGLQLHGYLIQSGLWASWSVQNS 205
Query: 253 YACM---VDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLF 309
+ CM VD + A L MP E +W A++G Y E ++G + ++
Sbjct: 206 FLCMYADVD-------MDCARILFDEMP-EKDVISWSAMIGGYVQYLEDQIGLQIFQKML 257
Query: 310 ELEPENSSPYVLLSSIYAAAD 330
+L+S + A A+
Sbjct: 258 STSRITPDGVILVSVLKACAN 278
>29093.m000079 pentatricopeptide repeat-containing protein, putative
Length = 708
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 201/395 (50%), Gaps = 40/395 (10%)
Query: 1 DNAKRVFV-QMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDG 55
++A+RVF + R+L +WN+M+ + A K+F DM E D+ ++T +I
Sbjct: 255 EDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISA 314
Query: 56 YAKVGDIASARAL----------------------------------FDKAPKRDAFLWS 81
+ + S L F +D W+
Sbjct: 315 CSHKDNGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWN 374
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+++G++Q G ALK+F M V D Y +++ +CS + L L + + +S
Sbjct: 375 SILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKS 434
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ V ++LI M +KCG ++ A K FE+ K ++ S++ + HG + A+GL
Sbjct: 435 GFE-SNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQGDVALGL 493
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F +M ++ + D+ F LTACSH LVE+G++ ++M S Y + P EHYAC VDL
Sbjct: 494 FFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACAVDLFG 553
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVL 321
R+G L EA L++SMP + A W LLGAC+ G++EL VA+ L ELEPE YV+
Sbjct: 554 RAGYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLLELEPEEHCTYVI 613
Query: 322 LSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
LS++Y +W + + + M+ER ++K+PG SWI
Sbjct: 614 LSNMYGHLKRWDEKACMARLMRERKVKKVPGWSWI 648
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 139/339 (41%), Gaps = 48/339 (14%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGG------DLINARKVFDDMP-------------- 42
A +F +M R+ +WN M+ G V G +L + K F MP
Sbjct: 55 ACNLFDEMSHRDTVTWNTMISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVAC 114
Query: 43 -------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
E V + + ++D YAK + A +F P+R++ W+ L
Sbjct: 115 ACRLDVGQQVHSLIVKMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNAL 174
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I+G+ G + A + + ME V+ D+ L++ + L + C + + +
Sbjct: 175 IAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGV 234
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFE-EMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
T V A I ++CG+++ A ++F+ + RDL ++ SM+ H E A LF
Sbjct: 235 QFDNT-VCNATITSYSQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLF 293
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDLL 260
M G PD +T I++ACSH + GK H + +VP M L
Sbjct: 294 LDMQQFGFEPDIYTYTTIISACSHK---DNGKSLHGLVIKRGLEQLVPICNAVIAMY-LE 349
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
S S +++A + SM + S W ++L G E
Sbjct: 350 SSSNSMEDALNVFHSMESKDRVS-WNSILTGFSQTGHSE 387
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 113/240 (47%), Gaps = 18/240 (7%)
Query: 60 GDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLM 119
G + A LFD+ RD W+ +ISGY +G A ++++ M+ + PD Y S++
Sbjct: 50 GGLTFACNLFDEMSHRDTVTWNTMISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGSIL 109
Query: 120 SACSQVGNLDLAKWVDCYLSQSSIDIG-QTHVVA--ALIDMNAKCGNMDRANKLFEEMPK 176
+ LD+ + V + + +G + HV A AL+DM AKC + A +F+ +P+
Sbjct: 110 KGVACACRLDVGQQVHSLI----VKMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPR 165
Query: 177 RDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHY 236
R+ S+ ++I G + G + A L M EG+ D+ F+ +LT L++E K Y
Sbjct: 166 RNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLT------LLDEKKFY 219
Query: 237 FETMKSKYSMVPSPEHY---ACMVDLLSRS--GQLKEAYELLKSMPVESHASAWGALLGA 291
TM+ ++ + C + S S G L++A + W ++L A
Sbjct: 220 KLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRDLVTWNSMLAA 279
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 154/359 (42%), Gaps = 59/359 (16%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV--------------- 46
+A VF +P RN SWNA++ G V GD A + M E V
Sbjct: 155 DAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLTLLD 214
Query: 47 -------------------VSF-----TVMIDGYAKVGDIASARALFDKA-PKRDAFLWS 81
V F I Y++ G + A +FD A RD W+
Sbjct: 215 EKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRDLVTWN 274
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+++ + + A K+F M+ +PD Y +++SACS N K + + +
Sbjct: 275 SMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSHKDN---GKSLHGLVIKR 331
Query: 142 SID--IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAV 199
++ + + V A+ + + +M+ A +F M +D S+ S++ G S G++E A+
Sbjct: 332 GLEQLVPICNAVIAMY-LESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHSENAL 390
Query: 200 GLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH-YFETMKSKY---SMVPSPEHYAC 255
LF M + D+ AF+ +L +CS ++ G+ + T+KS + V S
Sbjct: 391 KLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGFESNDFVASS----- 445
Query: 256 MVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPE 314
++ + S+ G +++A + + +S + W +++ A +G+ G++ F++ +
Sbjct: 446 LIFMYSKCGMIEDARKSFEKTAKDS-SITWNSIMFAYAQHGQ---GDVALGLFFQMRDK 500
>27810.m000635 DNA-damage-inducible protein f, putative
Length = 906
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/304 (35%), Positives = 182/304 (59%), Gaps = 13/304 (4%)
Query: 53 IDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDE 112
+D YAK G+++ AR +FD+ P+R+ WS +I GYAQ G EAL++F+ L ++ ++
Sbjct: 52 VDMYAKCGELSDARKVFDEMPERNVVSWSGMIYGYAQVGEDEEALRLFKEALLEDLDVND 111
Query: 113 YIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFE 172
+I S++ C L+L + + ++S D + V ++LI ++CG ++ A K+F+
Sbjct: 112 FIYSSVIRVCGDSTLLELGRQIQGLCLKTSYD-SSSFVGSSLISFYSRCGVVEAAFKVFD 170
Query: 173 EMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEE 232
E+ ++L + +M+ + H + E+ LF+KM N G+ P+ F +L ACSH L+E+
Sbjct: 171 EVSIKNLGMWNAMLIACAQHAHTEKVFYLFDKMKNVGMKPNFITFLCLLYACSHAGLIEK 230
Query: 233 GKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGAC 292
G+ YFE MK +Y + P +HYA +VDLL R+G+L+EA ++K MP++ S WGA L C
Sbjct: 231 GQRYFERMK-EYGIEPGAQHYATLVDLLGRAGKLQEALAIIKGMPIDPTESVWGAFLTGC 289
Query: 293 KFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPG 352
+ +G EL A+R+FEL P +S AA ++ D + + +++RG++K G
Sbjct: 290 RLHGNTELAAFAADRIFELGPVSS-----------AAQRYGDAAKARKMLRDRGVKKETG 338
Query: 353 CSWI 356
SWI
Sbjct: 339 LSWI 342
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 105/197 (53%), Gaps = 3/197 (1%)
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
M L +++PD++I S AC+ G D+ K V ++ ++ + V ++ +DM AKCG
Sbjct: 1 MLLHDIRPDDHIFPSATKACAFWGRCDVGKSVHGFVIKTGYNF-NVFVGSSTVDMYAKCG 59
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
+ A K+F+EMP+R++ S+ MI G + G E+A+ LF + L E L ++ ++ ++
Sbjct: 60 ELSDARKVFDEMPERNVVSWSGMIYGYAQVGEDEEALRLFKEALLEDLDVNDFIYSSVIR 119
Query: 223 ACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHA 282
C L+E G+ + + K S S + ++ SR G ++ A+++ + ++ +
Sbjct: 120 VCGDSTLLELGRQ-IQGLCLKTSYDSSSFVGSSLISFYSRCGVVEAAFKVFDEVSIK-NL 177
Query: 283 SAWGALLGACKFYGEVE 299
W A+L AC + E
Sbjct: 178 GMWNAMLIACAQHAHTE 194
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 111/254 (43%), Gaps = 41/254 (16%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVF-----DDMPERDVVSFTV----- 51
+A++VF +MPERN+ SW+ M+ G + G+ A ++F +D+ D + +V
Sbjct: 63 DARKVFDEMPERNVVSWSGMIYGYAQVGEDEEALRLFKEALLEDLDVNDFIYSSVIRVCG 122
Query: 52 -----------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+I Y++ G + +A +FD+ ++ +W+
Sbjct: 123 DSTLLELGRQIQGLCLKTSYDSSSFVGSSLISFYSRCGVVEAAFKVFDEVSIKNLGMWNA 182
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
++ AQ+ + +F M+ + +KP+ + L+ ACS G ++ + + +
Sbjct: 183 MLIACAQHAHTEKVFYLFDKMKNVGMKPNFITFLCLLYACSHAGLIEKGQRYFERMKEYG 242
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS-YCSMIQGLSIHGYAEQAVGL 201
I+ G H A L+D+ + G + A + + MP S + + + G +HG E A
Sbjct: 243 IEPGAQH-YATLVDLLGRAGKLQEALAIIKGMPIDPTESVWGAFLTGCRLHGNTELAAFA 301
Query: 202 FNKMLNEGLIPDNA 215
+++ G + A
Sbjct: 302 ADRIFELGPVSSAA 315
>30170.m013878 pentatricopeptide repeat-containing protein, putative
Length = 1113
Score = 212 bits (539), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 206/385 (53%), Gaps = 40/385 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV------------- 47
D+A+ ++ +P++NL S A++ + G+L + F M + ++
Sbjct: 690 DHAELLYWSLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGI 749
Query: 48 ----------------------SFTVMIDG----YAKVGDIASARALFDKAPKRDAFLWS 81
+F ++ +G Y+K ++ + LF ++ W+
Sbjct: 750 ADPVHICIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWN 809
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+ISG Q G + A+++F M++ PD + SL+S CSQ+G L + + Y+ ++
Sbjct: 810 SVISGCVQAGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGERLHSYILRN 869
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+++ + V ALI M KCG++ A ++F+ + K L ++ +MI G S +G+ +A+
Sbjct: 870 KLEM-EDFVGTALIHMYTKCGSIVHAERVFKSIGKPCLATWNAMISGYSCYGFEHKALTC 928
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
+++M +G+ PD F +L AC+HG L+ EG+ YF+ M Y MVP+ +H ACMV LL+
Sbjct: 929 YSEMQEQGVEPDKITFLGVLAACTHGGLIHEGRRYFQIMTKVYDMVPTLQHCACMVGLLA 988
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVL 321
R G +EA +K+M E ++ WGA L AC + EV+LGE +A +L+ L+ N YVL
Sbjct: 989 RVGLFEEALLFIKNMEKEPDSAVWGAFLSACCIHQEVKLGEYLAKKLYLLDCRNGGLYVL 1048
Query: 322 LSSIYAAADQWLDVSHVKNKMKERG 346
+S++YA +W DV+ V+ MK+ G
Sbjct: 1049 MSNLYAVTGRWDDVARVREMMKDAG 1073
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 1/161 (0%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T ++D Y K+G ++ A FD P RD W+ LI GY++NG AL++F M +
Sbjct: 481 TALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGYDFSALELFVQMLKLGFC 540
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
P + +V L+ +C Q+ + K + + +S + + V AL M AKCG+++ A
Sbjct: 541 PRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHL-DPQVKNALTSMYAKCGDLEAAEY 599
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGL 210
LFEEM + + S+ +MI +G+ ++A+ +F +M+ G+
Sbjct: 600 LFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGV 640
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 139/330 (42%), Gaps = 42/330 (12%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM--------------------- 41
A+ +F +M ++++ SWN M+G + G A VF M
Sbjct: 597 AEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEVSQVTIMSLPSANAN 656
Query: 42 PER------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQ 89
PE D T +I YA+ G A L+ P+++ + +I+ YA+
Sbjct: 657 PESIHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLYWSLPQKNLVSLTAIITSYAE 716
Query: 90 NGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTH 149
G ++ F M +N+KPD M+S++ + ++ + Y +S +D
Sbjct: 717 AGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHICIGHVFHGYAIKSGLDTFNL- 775
Query: 150 VVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEG 209
V LI M +K N++ LF M ++ L S+ S+I G G A A+ LF +M G
Sbjct: 776 VTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISGCVQAGRASHAIELFCQMKMHG 835
Query: 210 LIPDNAAFTVILTACSHGRLVEEGKHYFE-TMKSKYSMVPSPEHY--ACMVDLLSRSGQL 266
PD +L+ CS ++ G+ +++K M E + ++ + ++ G +
Sbjct: 836 CNPDAITIASLLSGCSQLGYLQFGERLHSYILRNKLEM----EDFVGTALIHMYTKCGSI 891
Query: 267 KEAYELLKSMPVESHASAWGALLGACKFYG 296
A + KS+ A+ W A++ YG
Sbjct: 892 VHAERVFKSIGKPCLAT-WNAMISGYSCYG 920
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 9/152 (5%)
Query: 148 THVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLN 207
+V AL+D+ K G + A+ F+ MP RD+ S+ ++I G S +GY A+ LF +ML
Sbjct: 477 VYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGYDFSALELFVQMLK 536
Query: 208 EGLIPDNAAFTVILTACSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDLLSRSGQ 265
G P +L +C LV +GK H F +KS + P ++ + + ++ G
Sbjct: 537 LGFCPRQTTLVGLLPSCGQLELVFQGKSIHGF-GIKSGLHLDPQVKN--ALTSMYAKCGD 593
Query: 266 LKEAYELLKSMPVESHASAWGALLGACKFYGE 297
L+ A L + M ++ +W ++GA YG+
Sbjct: 594 LEAAEYLFEEM-MDKSVVSWNTMIGA---YGQ 621
>30174.m008766 pentatricopeptide repeat-containing protein, putative
Length = 429
Score = 212 bits (539), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/240 (42%), Positives = 163/240 (67%), Gaps = 2/240 (0%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGD 61
NA+ +F QMPE++ ++NAM+ G VK GD+ +A+ +FD MP R+V+S+T MI GY GD
Sbjct: 172 NARILFDQMPEKDSAAYNAMLDGYVKAGDMESAQSLFDKMPARNVISWTSMIYGYCSGGD 231
Query: 62 IASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNV-KPDEYIMVSLMS 120
+ +AR+LFD P+R+ F W+ +I GY+QN +EALK+F M+ + +PD+ +VS++
Sbjct: 232 VLTARSLFDAMPERNLFSWNAMIGGYSQNNKSHEALKLFHEMQSRTLFEPDKVTVVSVLP 291
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
A + +G LDL W+ + ID +V AL+DM AKCG M +A ++F+ MPK++
Sbjct: 292 AIADLGALDLGSWIHQFARLKKID-RSINVCTALVDMYAKCGEMLKARRVFDSMPKKEEA 350
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
S+ ++I G +++G A++A+ F++M EG+ P++ +L+AC+HG LVEEGK +F+ M
Sbjct: 351 SWNALINGFAVNGCADEALTAFSEMKREGVKPNDVTMISVLSACNHGGLVEEGKRWFKAM 410
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 123/251 (49%), Gaps = 22/251 (8%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D+ T ++D YAK G++ AR +FD+ +R W+ LI G ++G A +F M
Sbjct: 122 DLYVSTALVDMYAKFGELCMARKMFDEMAERGVVSWTALIGGCMRSGDMGNARILFDQMP 181
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID-IGQTHVVAALIDMNAKC-- 161
+ D +++ + G+++ A QS D + +V++ + C
Sbjct: 182 ----EKDSAAYNAMLDGYVKAGDMESA--------QSLFDKMPARNVISWTSMIYGYCSG 229
Query: 162 GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLI-PDNAAFTVI 220
G++ A LF+ MP+R+LFS+ +MI G S + + +A+ LF++M + L PD +
Sbjct: 230 GDVLTARSLFDAMPERNLFSWNAMIGGYSQNNKSHEALKLFHEMQSRTLFEPDKVTVVSV 289
Query: 221 LTACSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPV 278
L A + ++ G H F +K + S +VD+ ++ G++ +A + SMP
Sbjct: 290 LPAIADLGALDLGSWIHQFARLK---KIDRSINVCTALVDMYAKCGEMLKARRVFDSMPK 346
Query: 279 ESHASAWGALL 289
+ AS W AL+
Sbjct: 347 KEEAS-WNALI 356
>30174.m008625 pentatricopeptide repeat-containing protein, putative
Length = 751
Score = 210 bits (535), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 170/299 (56%), Gaps = 3/299 (1%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T ++ Y K +SA +FD+ +D WS +IS YA+ G P +AL I++ M+ N K
Sbjct: 250 TALLQMYGKFSKFSSAWLVFDQLNYKDLIAWSAMISVYARGGKPYDALNIYRQMQSTNEK 309
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
+E VSL+ ACS +G +L + + +++++ + +ALID+ K G++ +
Sbjct: 310 ANEVTFVSLLQACSALGAQELGESIHGFITKAGHS-SNAFLNSALIDLYCKFGSVKKGKA 368
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
+F+E+ +DL + SMI G +++G +A+ F MLN G P+ F IL+ CS L
Sbjct: 369 VFDEISTKDLICWSSMINGYALNGCGSEALETFADMLNWGFKPNETVFLSILSVCSQCGL 428
Query: 230 VEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
EG+ +F M+ KY + P HYACMVDLLSR G ++EA +K MPV WGA+L
Sbjct: 429 EHEGRKWFYYMQEKYRLAPKLSHYACMVDLLSRHGHIEEALMFVKKMPVVPDKRIWGAVL 488
Query: 290 GACKFYGE--VELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERG 346
C+ G+ +E+ E V +L L+PEN+S YV L +YA +W DV + + E+G
Sbjct: 489 AGCRSRGDGSIEVAEFVVRQLSALDPENTSYYVTLLDLYAEQGRWKDVERLTKIVDEKG 547
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 133/324 (41%), Gaps = 83/324 (25%)
Query: 6 VFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM----PERDVVSF------------ 49
VF Q+ ++L +W+AM+ +GG +A ++ M + + V+F
Sbjct: 268 VFDQLNYKDLIAWSAMISVYARGGKPYDALNIYRQMQSTNEKANEVTFVSLLQACSALGA 327
Query: 50 -----------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
+ +ID Y K G + +A+FD+ +D WS +I+G
Sbjct: 328 QELGESIHGFITKAGHSSNAFLNSALIDLYCKFGSVKKGKAVFDEISTKDLICWSSMING 387
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVG-NLDLAKWVDCYLSQSSIDI 145
YA NG +EAL+ F M KP+E + +S++S CSQ G + KW Y Q +
Sbjct: 388 YALNGCGSEALETFADMLNWGFKPNETVFLSILSVCSQCGLEHEGRKWF--YYMQEKYRL 445
Query: 146 GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM 205
PK L Y M+ LS HG+ E+A+ KM
Sbjct: 446 A----------------------------PK--LSHYACMVDLLSRHGHIEEALMFVKKM 475
Query: 206 LNEGLIPDNAAFTVILTAC-SHGRLVEEGKHYFETMKSKYSMVP-SPEHYACMVDLLSRS 263
++PD + +L C S G E + ++ ++ P + +Y ++DL +
Sbjct: 476 ---PVVPDKRIWGAVLAGCRSRGDGSIEVAEF--VVRQLSALDPENTSYYVTLLDLYAEQ 530
Query: 264 GQLKEAYELLKSM----PVESHAS 283
G+ K+ L K + P +H++
Sbjct: 531 GRWKDVERLTKIVDEKGPTVAHSN 554
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 5/201 (2%)
Query: 29 GDLINARKVFDDMPERDVVSFTV----MIDGYAKVGDIASARALFDKAPKRDAFLWSVLI 84
G L +++ ++ SFTV ++D YAK G I ++ +F++ ++D W +I
Sbjct: 124 GGLCFVKEIHGFCLKKVFYSFTVVQNSLMDAYAKCGKIEASFYIFNRICEKDLISWRTVI 183
Query: 85 SGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
+N P EAL IF M+ + DE I+ + A Q L Y+ ++
Sbjct: 184 RICVENECPREALDIFLKMQRSTTEADEIIIRDTIMASIQAKELKFGLGFHAYIEKNGFS 243
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
G V AL+ M K A +F+++ +DL ++ +MI + G A+ ++ +
Sbjct: 244 -GYVSVGTALLQMYGKFSKFSSAWLVFDQLNYKDLIAWSAMISVYARGGKPYDALNIYRQ 302
Query: 205 MLNEGLIPDNAAFTVILTACS 225
M + + F +L ACS
Sbjct: 303 MQSTNEKANEVTFVSLLQACS 323
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 125/295 (42%), Gaps = 35/295 (11%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
E +V T +I Y + D + LFD+ D LWS ++S +N E ++ F+
Sbjct: 42 ELEVPVRTALIRFYT-LFDFEISLKLFDQKLHNDVVLWSAMVSACVKNAKYREGVQHFRR 100
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
M + + ++S++SAC +G L K + + + + T V +L+D AKCG
Sbjct: 101 MLNYGTEANHVTVISILSACGHLGGLCFVKEIHGFCLK-KVFYSFTVVQNSLMDAYAKCG 159
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
++ + +F + ++DL S+ ++I+ + +A+ +F KM D +
Sbjct: 160 KIEASFYIFNRICEKDLISWRTVIRICVENECPREALDIFLKMQRSTTEADEIIIRDTIM 219
Query: 223 ACSHGRLVEEG---KHYFE---------------TMKSKYSMVPSPE------------H 252
A + ++ G Y E M K+S S
Sbjct: 220 ASIQAKELKFGLGFHAYIEKNGFSGYVSVGTALLQMYGKFSKFSSAWLVFDQLNYKDLIA 279
Query: 253 YACMVDLLSRSGQLKEA---YELLKSMPVESHASAWGALLGACKFYGEVELGEIV 304
++ M+ + +R G+ +A Y ++S +++ + +LL AC G ELGE +
Sbjct: 280 WSAMISVYARGGKPYDALNIYRQMQSTNEKANEVTFVSLLQACSALGAQELGESI 334
>29869.m001155 pentatricopeptide repeat-containing protein, putative
Length = 484
Score = 209 bits (533), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 194/336 (57%), Gaps = 8/336 (2%)
Query: 24 GLVKGGDLINA---RKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLW 80
G + G I+ RK+F +P +V T ++D Y K G++ A+ +F + +++ W
Sbjct: 25 GALSNGKCIHGYAIRKMF--LPH--LVLETALVDMYGKCGELELAKRVFSQIDEKNLVSW 80
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ +I+ Y QNGL EAL++F + KPD + S++ A +++ ++ K + Y+ +
Sbjct: 81 NTMIAAYVQNGLNMEALELFNCLWNEPPKPDAVTIASILPAYAELASVSECKQIHSYIIK 140
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
+ T + A++ M AKCG++ A ++F+ M +++ S+ +MI IHG+ ++
Sbjct: 141 IELS-SHTIISNAIVYMYAKCGDLKTARRIFDGMLCKNVVSWNTMIMAYGIHGFGTMSIQ 199
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
LF++M G+ P+ + F +L++CS LV+EG +F +MKS Y++ EH+ CMVDLL
Sbjct: 200 LFSEMRENGIKPNESTFVSLLSSCSITGLVDEGWEFFNSMKSDYNIDHGIEHFGCMVDLL 259
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYV 320
R+G L A + ++ +P+ A WG+LL A + + L E+ A +F LE +N+ YV
Sbjct: 260 GRTGNLDAAMQFIEELPLVPTARIWGSLLTASRNKNNIALAELAAKHIFSLEHDNTGCYV 319
Query: 321 LLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
LLS++YA A +W DV +K MK++G+ K C +
Sbjct: 320 LLSNMYAEAGRWEDVEQIKTLMKKKGIVKTVSCCMV 355
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 41/213 (19%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM----PERDVVSFTVMIDG--- 55
AKRVF Q+ E+NL SWN M+ V+ G + A ++F+ + P+ D V+ ++
Sbjct: 65 AKRVFSQIDEKNLVSWNTMIAAYVQNGLNMEALELFNCLWNEPPKPDAVTIASILPAYAE 124
Query: 56 --------------------------------YAKVGDIASARALFDKAPKRDAFLWSVL 83
YAK GD+ +AR +FD ++ W+ +
Sbjct: 125 LASVSECKQIHSYIIKIELSSHTIISNAIVYMYAKCGDLKTARRIFDGMLCKNVVSWNTM 184
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA-KWVDCYLSQSS 142
I Y +G ++++F M +KP+E VSL+S+CS G +D ++ + S +
Sbjct: 185 IMAYGIHGFGTMSIQLFSEMRENGIKPNESTFVSLLSSCSITGLVDEGWEFFNSMKSDYN 244
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
ID G H ++D+ + GN+D A + EE+P
Sbjct: 245 IDHGIEH-FGCMVDLLGRTGNLDAAMQFIEELP 276
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%), Gaps = 17/226 (7%)
Query: 107 NVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVV--AALIDMNAKCGNM 164
N+ PD M++L+ +CSQ G L K + Y + + H+V AL+DM KCG +
Sbjct: 6 NLIPDVITMINLLPSCSQSGALSNGKCIHGYAIRK---MFLPHLVLETALVDMYGKCGEL 62
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
+ A ++F ++ +++L S+ +MI +G +A+ LFN + NE PD IL A
Sbjct: 63 ELAKRVFSQIDEKNLVSWNTMIAAYVQNGLNMEALELFNCLWNEPPKPDAVTIASILPAY 122
Query: 225 SHGRLVEEGK----HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVES 280
+ V E K + + S ++++ + +V + ++ G LK A + M ++
Sbjct: 123 AELASVSECKQIHSYIIKIELSSHTIISNA-----IVYMYAKCGDLKTARRIFDGMLCKN 177
Query: 281 HASAWGALLGACKFYGEVELGEIVANRLFE--LEPENSSPYVLLSS 324
S W ++ A +G + + + + E ++P S+ LLSS
Sbjct: 178 VVS-WNTMIMAYGIHGFGTMSIQLFSEMRENGIKPNESTFVSLLSS 222
>30128.m008775 pentatricopeptide repeat-containing protein, putative
Length = 736
Score = 209 bits (533), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 206/395 (52%), Gaps = 40/395 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSF------- 49
D ++VF +M ERN+ +W A++ GL + ++ +F M E + +++
Sbjct: 40 DTGRQVFDEMLERNVITWTAIISGLSQNEMYEDSLGLFVQMRCGLIEPNFLTYLSSLTAC 99
Query: 50 ----------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ ++D Y+K G + AR +F+ A + D +
Sbjct: 100 SGLQALEKGRQIHGLVWKLGIQSNLCIESALMDLYSKCGSLEDARRVFESAVELDEVSMT 159
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
V++ G+ QNG EA++ F M + + D ++ +++ AC +L L K + + +
Sbjct: 160 VILVGFTQNGFEEEAIEFFVKMVNIGTEVDPNMVSAVLGACGVDTSLGLGKQIHSLVIKR 219
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
S+ V LI+M +KCG + + K+F + R+ S+ SMI + HG +A+ L
Sbjct: 220 SLG-SNPFVGNGLINMYSKCGELQESIKVFNGLTCRNSVSWNSMIAAFARHGDGFRALRL 278
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
+ +M+ EG +P + F +L ACSH LV++G + ++M Y + P EHYAC+VD+L
Sbjct: 279 YEEMIQEGAVPTDLTFLSLLHACSHVGLVDKGMKFLKSMTKVYGISPRAEHYACVVDMLG 338
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVL 321
R+G L EA L++ + ++ W ALLGAC G+ E+G+ A +L LEP+ +PYVL
Sbjct: 339 RAGLLNEAKSLIERLSIKPDVLIWQALLGACSIRGDTEIGKYAAEQLLLLEPKKPAPYVL 398
Query: 322 LSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
L++IY++ +W + + +MKE G+ K G SWI
Sbjct: 399 LANIYSSKGRWDERARTIKRMKEMGVAKETGISWI 433
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 148/271 (54%), Gaps = 3/271 (1%)
Query: 27 KGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
K G +A KVFDDMP RD VS+ M+ G+ + GD+ + R +FD+ +R+ W+ +ISG
Sbjct: 4 KCGVFSDAVKVFDDMPTRDTVSWNTMVSGFLRNGDLDTGRQVFDEMLERNVITWTAIISG 63
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG 146
+QN + ++L +F M ++P+ +S ++ACS + L+ + + + + I
Sbjct: 64 LSQNEMYEDSLGLFVQMRCGLIEPNFLTYLSSLTACSGLQALEKGRQIHGLVWKLGIQ-S 122
Query: 147 QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
+ +AL+D+ +KCG+++ A ++FE + D S ++ G + +G+ E+A+ F KM+
Sbjct: 123 NLCIESALMDLYSKCGSLEDARRVFESAVELDEVSMTVILVGFTQNGFEEEAIEFFVKMV 182
Query: 207 NEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQL 266
N G D + +L AC + GK ++ K S+ +P ++++ S+ G+L
Sbjct: 183 NIGTEVDPNMVSAVLGACGVDTSLGLGKQ-IHSLVIKRSLGSNPFVGNGLINMYSKCGEL 241
Query: 267 KEAYELLKSMPVESHASAWGALLGACKFYGE 297
+E+ ++ + + S W +++ A +G+
Sbjct: 242 QESIKVFNGLTCRNSVS-WNSMIAAFARHGD 271
>29681.m001332 pentatricopeptide repeat-containing protein, putative
Length = 765
Score = 208 bits (529), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 101/230 (43%), Positives = 149/230 (64%), Gaps = 2/230 (0%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP 73
NLT NAM+ VK G L +AR++FD M E+D+ S+T MIDGYAK D +AR++FD P
Sbjct: 267 NLTVSNAMLDMYVKNGSLEDARRLFDKMEEKDIFSWTTMIDGYAKRRDFDAARSVFDAMP 326
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGMEL-MNVKPDEYIMVSLMSACSQVGNLDLAK 132
++D W+VLIS Y Q+G P EAL IF ++L KPDE +VS +SAC+Q+G +D+
Sbjct: 327 RQDISAWNVLISAYEQDGKPKEALAIFHELQLSKTAKPDEVTLVSTLSACAQLGAIDIGG 386
Query: 133 WVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIH 192
W+ Y+ + I + H+ +LIDM +KCG +++A +F + +RD+F + +MI GL++H
Sbjct: 387 WIHVYIKKQDIKLN-CHLTTSLIDMYSKCGEVEKALDIFYSVDRRDVFVWSAMIAGLAMH 445
Query: 193 GYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKS 242
G A+ LF +M + P+ FT +L ACSH LV EG+ +F M+S
Sbjct: 446 GRGRAAIDLFFEMQETKVRPNAVTFTNLLCACSHTGLVNEGRMFFNQMES 495
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 176/390 (45%), Gaps = 78/390 (20%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGD-----LINARKVFD--DMPERDVVSFTV-- 51
D A++VF ++ + NL +WN ++ + LI R ++D D P + F +
Sbjct: 82 DYARKVFEEISQPNLYTWNTLIRAFASSPEPIHSLLIFIRMLYDSPDFPNKFTFPFVIKA 141
Query: 52 -------------------------------MIDGYAKVGDIASARALFDKAPKRDAFLW 80
+I YA GD+ SA ++F K ++D W
Sbjct: 142 AAGVASLPFSQAIHGMAIKASLGSDLFILNSLIHCYASCGDLDSAYSVFVKIEEKDVVSW 201
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ +I G+ G P++AL++FQ M+ NV+P++ MV ++SAC++ +L+ + V Y+ +
Sbjct: 202 NSMIKGFVLGGCPDKALELFQLMKAENVRPNDVTMVGVLSACAKKMDLEFGRRVCHYIER 261
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIH-------- 192
+ I++ T V A++DM K G+++ A +LF++M ++D+FS+ +MI G +
Sbjct: 262 NGINVNLT-VSNAMLDMYVKNGSLEDARRLFDKMEEKDIFSWTTMIDGYAKRRDFDAARS 320
Query: 193 -----------------------GYAEQAVGLFNKM-LNEGLIPDNAAFTVILTACSHGR 228
G ++A+ +F+++ L++ PD L+AC+
Sbjct: 321 VFDAMPRQDISAWNVLISAYEQDGKPKEALAIFHELQLSKTAKPDEVTLVSTLSACAQLG 380
Query: 229 LVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGAL 288
++ G + K + + ++D+ S+ G++++A ++ S+ W A+
Sbjct: 381 AIDIGG-WIHVYIKKQDIKLNCHLTTSLIDMYSKCGEVEKALDIFYSVD-RRDVFVWSAM 438
Query: 289 LGACKFYGEVELGEIVANRLFELEPENSSP 318
+ +G G + FE++ P
Sbjct: 439 IAGLAMHGR---GRAAIDLFFEMQETKVRP 465
>29830.m001392 pentatricopeptide repeat-containing protein, putative
Length = 578
Score = 207 bits (528), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 212/396 (53%), Gaps = 45/396 (11%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PERDVVSFTVMIDGY 56
A RVF Q+ +N+ SW A+V G D A F M P R V+ ++ +
Sbjct: 182 ALRVFDQIEVKNVVSWTALVSGCSANLDYNMALDCFRAMQINGVRPNR--VTLIAILPAF 239
Query: 57 AKVG------------------------------------DIASARALFDKAPKRDAFLW 80
A++G + A+ F+++ +D +W
Sbjct: 240 AELGCAKTGKEIHGYAFRHGFDLDHHFLSSLIHIYCRSREGLQLAKLTFERSNVKDVVMW 299
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
S +I Y ++ EALK+F+ M +P+ ++++++AC+ + +L Y+ +
Sbjct: 300 SSIIGSYCRSADSIEALKLFRWMRADGTEPNSVTLLAVITACTTLTSLKNGYGTHGYIVK 359
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
++ T++ ALI+M +KCG + ++++F+EM +D S+ ++I +HG+ ++A+
Sbjct: 360 CGLNF-DTYIGNALINMYSKCGCVVASHQIFKEMHIKDSVSWSTLITAYGLHGHGKEALC 418
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
LF++M +G+ PD F +L+AC+H LV+EG+ F+ +K + + EHYAC+VDLL
Sbjct: 419 LFHEMQLQGVEPDAMTFLAVLSACNHSGLVKEGQQIFDNVKKDGKVSLTVEHYACLVDLL 478
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYV 320
+SG++ +A+++L++MP++ + W +L+ ACK +G +E+ E +A L + EP N++ +
Sbjct: 479 GKSGKVDDAFDILRAMPMKPSTTIWSSLVSACKIHGRLEIAERLAQELIKSEPSNAANHT 538
Query: 321 LLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
LLS IYA + W V V+ M+ +GL K G S +
Sbjct: 539 LLSMIYAESGNWFAVEDVRRLMRVQGLSKCYGFSQV 574
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 147/349 (42%), Gaps = 66/349 (18%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE----------------- 43
++A +VF MP ++ SWN ++ G + G +F +M E
Sbjct: 78 ESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYECGIVPKPELVASVVSVC 137
Query: 44 -----------------------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLW 80
+++ T ++D Y K GD A +FD+ ++ W
Sbjct: 138 VRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALRVFDQIEVKNVVSW 197
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ L+SG + N N AL F+ M++ V+P+ +++++ A +++G K + Y +
Sbjct: 198 TALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAILPAFAELGCAKTGKEIHGYAFR 257
Query: 141 SSIDIGQTHVVAALIDMNAKCG-NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAV 199
D+ H +++LI + + + A FE +D+ + S+I + +A+
Sbjct: 258 HGFDLDH-HFLSSLIHIYCRSREGLQLAKLTFERSNVKDVVMWSSIIGSYCRSADSIEAL 316
Query: 200 GLFNKMLNEGLIPDNAAFTVILTAC-----------SHGRLVEEGKHYFETMKSKYSMVP 248
LF M +G P++ ++TAC +HG +V+ G + F+T
Sbjct: 317 KLFRWMRADGTEPNSVTLLAVITACTTLTSLKNGYGTHGYIVKCGLN-FDTYIGN----- 370
Query: 249 SPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
++++ S+ G + ++++ K M ++ S W L+ A +G
Sbjct: 371 ------ALINMYSKCGCVVASHQIFKEMHIKDSVS-WSTLITAYGLHGH 412
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
+ D V I YAK SA +FD P +D W+ +I+GY QNG + +F+
Sbjct: 58 DSDFVICNSFISFYAKSSCTESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKE 117
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
M + P ++ S++S C ++G++ L + + + + V+ +L+D K G
Sbjct: 118 MYECGIVPKPELVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSG 177
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
+ A ++F+++ +++ S+ +++ G S + A+ F M G+ P+ IL
Sbjct: 178 DSLMALRVFDQIEVKNVVSWTALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAILP 237
Query: 223 ACSHGRLVEEGK 234
A + + GK
Sbjct: 238 AFAELGCAKTGK 249
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 87/202 (43%), Gaps = 2/202 (0%)
Query: 91 GLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHV 150
GL ++ LK ++ + ++ + YI+ S++ ACS + + +S +D +
Sbjct: 5 GLNHQILKFYKELHSSDIYANAYIIPSVIKACSFSNCHHFGIQLYSIVLKSGLD-SDFVI 63
Query: 151 VAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGL 210
+ I AK + A K+F+ MP +D S+ +I G +GY Q +F +M G+
Sbjct: 64 CNSFISFYAKSSCTESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYECGI 123
Query: 211 IPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAY 270
+P +++ C ++ G+ + + +VD +SG A
Sbjct: 124 VPKPELVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMAL 183
Query: 271 ELLKSMPVESHASAWGALLGAC 292
+ + V++ S W AL+ C
Sbjct: 184 RVFDQIEVKNVVS-WTALVSGC 204
>29598.m000467 pentatricopeptide repeat-containing protein, putative
Length = 313
Score = 207 bits (526), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 112/300 (37%), Positives = 173/300 (57%), Gaps = 18/300 (6%)
Query: 74 KRDAFLWSVLISGYAQNGLPNE-----ALKIFQGM--ELMNVKPDEYIMVSLMSACSQVG 126
KR W+ +I+G++ + AL +F+ M ++ KP++ MVS++SA SQ+G
Sbjct: 3 KRSVVTWNAMITGFSSQREKAKDSAVAALMLFRDMVVDVCAEKPNDITMVSVLSASSQLG 62
Query: 127 NLDLAKWVDCYLSQSSIDIGQTHVV--AALIDMNAKCGNMDRANKLFEEMPKRDLFSYCS 184
L+ + Y+ + +I + Q + L+DM +KCG +D A K F EM ++ ++ +
Sbjct: 63 VLECGACIHGYI-EKTICVPQNDIFIGTGLVDMYSKCGCLDSAVKFFVEMKLKNKLTWTA 121
Query: 185 MIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKY 244
M GL+IHG ++ + L + M G+ P+ FT + +AC H LVEEG H F MK K+
Sbjct: 122 MATGLAIHGKGKETLELLDGMGASGIKPNAVTFTSLFSACCHSGLVEEGLHLFHNMKGKF 181
Query: 245 SMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIV 304
+ P +HY C+VDLL + G LKEAYE + MP+E A W LL ACK +G+V +GE V
Sbjct: 182 GIEPGIQHYGCIVDLLGKGGHLKEAYEFIAGMPMEPDAILWRCLLSACKVHGDVVMGEKV 241
Query: 305 ANRLFELEPENSS--------PYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
A L L+PE +S YV LS++YA+A++W DV ++ +MK + L PG S +
Sbjct: 242 AKILLHLQPEKNSVESDDSSEDYVALSNVYASAERWEDVEILRKEMKVKRLETKPGASLV 301
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 3/155 (1%)
Query: 41 MPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIF 100
+P+ D+ T ++D Y+K G + SA F + ++ W+ + +G A +G E L++
Sbjct: 80 VPQNDIFIGTGLVDMYSKCGCLDSAVKFFVEMKLKNKLTWTAMATGLAIHGKGKETLELL 139
Query: 101 QGMELMNVKPDEYIMVSLMSACSQVGNLDLA-KWVDCYLSQSSIDIGQTHVVAALIDMNA 159
GM +KP+ SL SAC G ++ + I+ G H ++D+
Sbjct: 140 DGMGASGIKPNAVTFTSLFSACCHSGLVEEGLHLFHNMKGKFGIEPGIQH-YGCIVDLLG 198
Query: 160 KCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHG 193
K G++ A + MP + D + ++ +HG
Sbjct: 199 KGGHLKEAYEFIAGMPMEPDAILWRCLLSACKVHG 233
>30131.m007153 pentatricopeptide repeat-containing protein, putative
Length = 349
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 186/319 (58%), Gaps = 12/319 (3%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
+ +ID Y+K+ + A +FD+ P ++ + L+SGY + L + +++ + M +++
Sbjct: 27 SALIDLYSKLSFPSDAATVFDEIPVKNTVCANALLSGYIEAKLWYQGVELIKEMPFLSLD 86
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI-GQTHVVAALIDMNAKCGNMDRAN 168
D + + +++ + + ++ K V YL + D+ + ++LI+M KCG + +A
Sbjct: 87 YDNFTLSAMLRISAGLSAIEFGKQVHAYLIRKIYDVENDVFMQSSLIEMYGKCGYVGKAL 146
Query: 169 KL-----FEEMPKR--DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVIL 221
++ F KR D+ + SM+ +G+ E+ + LF +ML EG+ PD A+ ++
Sbjct: 147 QVLNFAGFRPGRKRNKDIVLWTSMLGVYGRNGHFEEVISLFEEMLKEGVRPDGVAYVTVI 206
Query: 222 TACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESH 281
+AC H V+ G YFE+M +++ PSPEHY+C+VDL R+G+L A++L+ M + H
Sbjct: 207 SACGHTGQVQLGIEYFESMSRDFNLTPSPEHYSCVVDLFCRAGELDRAWKLVNEMLTKGH 266
Query: 282 A----SAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSH 337
S WGA+L AC+ +G +E G++ A +LEP+N YV+LS++YA W ++ H
Sbjct: 267 EIHSISMWGAVLSACEEHGNIEFGKLAAREALKLEPQNVGIYVMLSNLYARFGMWDEIDH 326
Query: 338 VKNKMKERGLRKLPGCSWI 356
++ MK+RGL+K GCSWI
Sbjct: 327 LRKIMKDRGLKKDVGCSWI 345
>29635.m000454 pentatricopeptide repeat-containing protein, putative
Length = 487
Score = 204 bits (519), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 182/291 (62%), Gaps = 4/291 (1%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP 73
N+ NA++ VK + A+ VF +M ERD+VS+T +++G + + + +FD+ P
Sbjct: 164 NVKVCNAVMNVYVKCRLMGEAKGVFSEMGERDIVSWTALLEGVVNWEGVENGKVVFDQMP 223
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGMEL-MNVKPDEYIMVSLMSACSQVGNLDLAK 132
+R+ W+++ISGY +G E + M L + ++ + + S++SAC+Q G++ + +
Sbjct: 224 ERNEVGWTIMISGYVGSGFCKEGFLLLSEMVLGLRLELNYVTLCSILSACAQSGDVVMGR 283
Query: 133 WVDCY-LSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSI 191
WV Y L + +I V ALIDM AKCG + A ++F+ +P+R++ ++ +++ GL++
Sbjct: 284 WVHVYALKKMGREI-DMMVGTALIDMYAKCGRIKMAYEVFKYLPRRNVVAWNAILGGLAM 342
Query: 192 HGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPE 251
HG + +F KM+ E PD+ F +L+ACSH LV++G YF ++S+Y + P E
Sbjct: 343 HGKGRIVLVIFPKMIQE-TKPDDLTFIAVLSACSHSGLVDQGCQYFHILESEYGITPKIE 401
Query: 252 HYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGE 302
HYAC+VDLL R+G+L+EA L+K MP+ + G+LLG+C +G+++LG+
Sbjct: 402 HYACVVDLLGRAGRLEEAEMLIKKMPMPPNEFVLGSLLGSCYVHGKLQLGK 452
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 142/325 (43%), Gaps = 48/325 (14%)
Query: 56 YAKVGDIASARALFDKAPK--RDAFLWSVLISGYAQN-GLPNEALKIFQGMELMNVKPDE 112
Y++ G A LFD+ P +D W+ L+S A++ P A +F+ M V D+
Sbjct: 71 YSQCGITRYAHHLFDQIPNSHKDTADWTSLLSCLAKHTSTPRNAFSLFEEMRKRGVILDD 130
Query: 113 YIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFE 172
V + S C++VGNL++ + + + I V A++++ KC M A +F
Sbjct: 131 VAFVCVFSLCARVGNLEMGRQAHGCVVKMGFGI-NVKVCNAVMNVYVKCRLMGEAKGVFS 189
Query: 173 EMPKRDLFSYCS-------------------------------MIQGLSIHGYAEQAVGL 201
EM +RD+ S+ + MI G G+ ++ L
Sbjct: 190 EMGERDIVSWTALLEGVVNWEGVENGKVVFDQMPERNEVGWTIMISGYVGSGFCKEGFLL 249
Query: 202 FNKM-LNEGLIPDNAAFTVILTACSHGRLVEEGK----HYFETMKSKYSMVPSPEHYACM 256
++M L L + IL+AC+ V G+ + + M + M+ +
Sbjct: 250 LSEMVLGLRLELNYVTLCSILSACAQSGDVVMGRWVHVYALKKMGREIDMMVG----TAL 305
Query: 257 VDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLF-ELEPEN 315
+D+ ++ G++K AYE+ K +P + AW A+LG +G+ + ++ ++ E +P++
Sbjct: 306 IDMYAKCGRIKMAYEVFKYLP-RRNVVAWNAILGGLAMHGKGRIVLVIFPKMIQETKPDD 364
Query: 316 SSPYVLLSSIYAAA--DQWLDVSHV 338
+ +LS+ + DQ H+
Sbjct: 365 LTFIAVLSACSHSGLVDQGCQYFHI 389
>29736.m002020 pentatricopeptide repeat-containing protein, putative
Length = 589
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 182/309 (58%), Gaps = 6/309 (1%)
Query: 51 VMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM-ELMNVK 109
V+I Y+K I A +F ++D W+ L++ AL++F+ M ++ VK
Sbjct: 242 VIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVK 301
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYL--SQSSIDIGQTHVVAALIDMNAKCGNMDRA 167
PD++ +++AC+ + ++ K + +L ++ D+G V AL++M AKCG++ +
Sbjct: 302 PDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVG---VSNALVNMYAKCGSIKNS 358
Query: 168 NKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHG 227
+F R+L S+ ++I HG +A+ F KM G+ PD+ F +LTAC+H
Sbjct: 359 YDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHA 418
Query: 228 RLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGA 287
LVEEG+ YF +M+ Y + P+ EH++C++DLL R+G+L+EA E ++ +P G+
Sbjct: 419 GLVEEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGS 478
Query: 288 LLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGL 347
LL AC+ +G++ +GE +A +L +L+P +SPYVLLS++YA+ + W V+ +K GL
Sbjct: 479 LLSACRLHGDMVIGEHLATQLLKLQPVTTSPYVLLSNLYASDEMWGGVAEAWKMLKYSGL 538
Query: 348 RKLPGCSWI 356
+K PG S I
Sbjct: 539 KKEPGHSLI 547
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 118/253 (46%), Gaps = 12/253 (4%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D++ +I+ Y+K G++ AR +FD+ R+ WS +ISGY Q G P AL +F M
Sbjct: 37 DIIVSNHVINLYSKCGNVIFARRMFDEMSDRNLVSWSAIISGYDQTGQPLLALNLFSQMR 96
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG---QTHVVAALIDMNAKC 161
++ P+EY+ S++SAC+ + L V S+ +G + V ALI M KC
Sbjct: 97 IV---PNEYVFASVISACASLTALSQGLQVH----AQSLKLGCVSVSFVSNALISMYMKC 149
Query: 162 GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVIL 221
G A + M + + SY ++I G + E+ + F M +G PD F+ +L
Sbjct: 150 GLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLL 209
Query: 222 TACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESH 281
C+ G M K ++ S ++ + S+ ++EA E + + E
Sbjct: 210 GICTSYDDFWRGMQLHCQM-IKLNLEDSAFIGNVIITMYSKFNLIEEA-EKVFGLIKEKD 267
Query: 282 ASAWGALLGACKF 294
+W L+ AC F
Sbjct: 268 LISWNTLVTACCF 280
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 97/234 (41%), Gaps = 41/234 (17%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE----------------- 43
+ A++VF + E++L SWN +V D A +VF DM +
Sbjct: 254 EEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAA 313
Query: 44 -----------------------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLW 80
+DV +++ YAK G I ++ +F + R+ W
Sbjct: 314 CAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSW 373
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ +I+ + +GL AL+ F+ M+ + + PD V L++AC+ G ++ + + +
Sbjct: 374 NTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQVYFNSMEE 433
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHG 193
+ + LID+ + G + A + E++P D S++ +HG
Sbjct: 434 AYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLSACRLHG 487
>28619.m000046 pentatricopeptide repeat-containing protein, putative
Length = 458
Score = 199 bits (507), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 195/356 (54%), Gaps = 3/356 (0%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A VF ++ ++++ SWN+++ + G L A F MPE D +S+ +I+G A+ G+I
Sbjct: 97 ATWVFDKLIDKDIISWNSVIAACARNGRLELAYNFFCQMPELDTISYNEVINGIAQFGNI 156
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
A A+ P ++ W+ +I+ Y EAL+ F M ++K DEY ++S
Sbjct: 157 EDAIAILLNMPHSNSSSWNSVITAYVNRNQAREALEFFTKMHSSDIKKDEYTYSVILSGV 216
Query: 123 SQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSY 182
+ + C + D V +ALIDM +KCG + A +F+ +P R+L ++
Sbjct: 217 AGAAAWKWGMLIHCCAIKGGWDTSVV-VGSALIDMYSKCGQVKSAESMFQSLPVRNLITW 275
Query: 183 CSMIQGLSIHGYAEQAVGLFNKM-LNEGLIPDNAAFTVILTACSHGRL-VEEGKHYFETM 240
+MI G + +G + + + F +M + E L PD+ F +++ACS+ + +++ HYFE+M
Sbjct: 276 NAMISGYAHNGNSYEMIQHFEEMKMVEDLKPDSVTFLNVISACSNTEVPLQKAVHYFESM 335
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVEL 300
+ Y + P+ EH M+ L+ + G++ +A ++ + S W ALL AC +++
Sbjct: 336 INDYMIEPTIEHCCSMIRLMGQRGEVWQAKRMIYELAFGSCGVVWRALLSACGACRNLKV 395
Query: 301 GEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+I A ++ ELE ++ YV +S+I+A+ QW DVS V+ M++R ++K G SWI
Sbjct: 396 AKIAAAKVIELEGDDDYVYVTMSNIFASYGQWEDVSKVRKIMRQREVKKEVGRSWI 451
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 110/269 (40%), Gaps = 63/269 (23%)
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
L+ A G +AL +F + +V PD Y +SAC Q+ L + + C + +
Sbjct: 13 TLLHKVALTGHFRKALGLFLQLNRSDVCPDAYSFTVALSACGQLSMLQFGRSIHCKIVKC 72
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
S D G V LIDM KC ++ A +F+++ +D+ S+ S+I + +G E A
Sbjct: 73 SSDCGVV-VGNCLIDMYGKCASVKEATWVFDKLIDKDIISWNSVIAACARNGRLELAYNF 131
Query: 202 FNKM-------LNE--------GLIPD------------NAAFTVILTACSHGRLVEEGK 234
F +M NE G I D ++++ ++TA + E
Sbjct: 132 FCQMPELDTISYNEVINGIAQFGNIEDAIAILLNMPHSNSSSWNSVITAYVNRNQAREAL 191
Query: 235 HYFETMKSK--------YSMVPSPEH-----------YAC---------------MVDLL 260
+F M S YS++ S + C ++D+
Sbjct: 192 EFFTKMHSSDIKKDEYTYSVILSGVAGAAAWKWGMLIHCCAIKGGWDTSVVVGSALIDMY 251
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALL 289
S+ GQ+K A + +S+PV + + W A++
Sbjct: 252 SKCGQVKSAESMFQSLPVRNLIT-WNAMI 279
>27660.m000082 pentatricopeptide repeat-containing protein, putative
Length = 515
Score = 199 bits (506), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/247 (40%), Positives = 162/247 (65%), Gaps = 2/247 (0%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
+ A+R+F P+R++ WN M+ G + GDL+ A+++F MP +DV+S+ +++GYA G
Sbjct: 247 ETARRLFELAPQRDVVLWNIMISGYIDIGDLVRAQELFHKMPNKDVMSWNTLLNGYANGG 306
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN-VKPDEYIMVSLM 119
DI + LF++ P+R+ F W+ LI GYA +G E L F+ M + V P++ +V+++
Sbjct: 307 DIEACERLFEEMPERNVFSWNGLIGGYAHHGCFLEVLSSFKRMLVDGIVVPNDATLVTVL 366
Query: 120 SACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDL 179
SAC+++G LDL KWV Y +QS+ G ++ ALIDM AKCGN++ A +F+ + K+DL
Sbjct: 367 SACARLGALDLGKWVHMY-AQSNGYKGNVYIGNALIDMYAKCGNVENAIVVFKSLDKKDL 425
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFET 239
S+ ++I GL++HG A A+ LF++M + G PD F +L AC+H LV++G YF++
Sbjct: 426 ISWNTLIGGLAVHGRAADALYLFSRMKDAGEKPDGITFLGVLCACTHMGLVDDGFSYFQS 485
Query: 240 MKSKYSM 246
M + S+
Sbjct: 486 MTTVSSL 492
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 136/287 (47%), Gaps = 52/287 (18%)
Query: 19 NAMVGGLV-----KGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP 73
N VG ++ G +++A +VF +M ER+VV++T MI G+ DI +AR LF+ AP
Sbjct: 198 NPFVGTMLIDLYSSGRMIVSAYRVFGEMIERNVVAWTSMIKGFILCNDIETARRLFELAP 257
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKW 133
+RD LW+++ISGY G A ++F M N D+ W
Sbjct: 258 QRDVVLWNIMISGYIDIGDLVRAQELFHKMP----------------------NKDVMSW 295
Query: 134 VDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHG 193
L++ A G+++ +LFEEMP+R++FS+ +I G + HG
Sbjct: 296 ------------------NTLLNGYANGGDIEACERLFEEMPERNVFSWNGLIGGYAHHG 337
Query: 194 YAEQAVGLFNKMLNEGL-IPDNAAFTVILTACSHGRLVEEGK--HYFETMKSKYSMVPSP 250
+ + F +ML +G+ +P++A +L+AC+ ++ GK H + V
Sbjct: 338 CFLEVLSSFKRMLVDGIVVPNDATLVTVLSACARLGALDLGKWVHMYAQSNGYKGNVYIG 397
Query: 251 EHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
++D+ ++ G ++ A + KS+ + S W L+G +G
Sbjct: 398 N---ALIDMYAKCGNVENAIVVFKSLDKKDLIS-WNTLIGGLAVHGR 440
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 126/288 (43%), Gaps = 45/288 (15%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I +A + A LFD+ P+ + W+ ++ GY+ N E + +F+ M M++ P+
Sbjct: 104 IITSFALFKRMRHAHKLFDQIPEPNVSNWNAMLKGYSLNDSHREVIVLFRKMISMDILPN 163
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSS-----------ID--------IGQTHVVA 152
+ ++ + ++ + + C++ +S ID + V
Sbjct: 164 CFSFPIVIKSSVKINAFKEGEELHCFVIKSGCRANPFVGTMLIDLYSSGRMIVSAYRVFG 223
Query: 153 ALIDMNAK-----------CGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+I+ N C +++ A +LFE P+RD+ + MI G G +A L
Sbjct: 224 EMIERNVVAWTSMIKGFILCNDIETARRLFELAPQRDVVLWNIMISGYIDIGDLVRAQEL 283
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSK-----YSMVPSPEHYACM 256
F+KM N+ D ++ +L ++G +E + FE M + ++ H+ C
Sbjct: 284 FHKMPNK----DVMSWNTLLNGYANGGDIEACERLFEEMPERNVFSWNGLIGGYAHHGCF 339
Query: 257 VDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIV 304
+++LS ++ L+ + V + A+ +L AC G ++LG+ V
Sbjct: 340 LEVLSSFKRM-----LVDGIVVPNDATLV-TVLSACARLGALDLGKWV 381
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
Query: 115 MVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM 174
++SL+ +C + +L + ++ + ++ +I A M A+KLF+++
Sbjct: 69 IISLLYSCKTLNHL---HQIQSHIINHGLQFND-YITPKIITSFALFKRMRHAHKLFDQI 124
Query: 175 PKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK 234
P+ ++ ++ +M++G S++ + + LF KM++ ++P+ +F +++ + +EG+
Sbjct: 125 PEPNVSNWNAMLKGYSLNDSHREVIVLFRKMISMDILPNCFSFPIVIKSSVKINAFKEGE 184
Query: 235 HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKF 294
K +P ++DL S + AY + M +E + AW +++
Sbjct: 185 E-LHCFVIKSGCRANPFVGTMLIDLYSSGRMIVSAYRVFGEM-IERNVVAWTSMIKGFIL 242
Query: 295 YGEVELGEIVANRLFELEPE 314
++E A RLFEL P+
Sbjct: 243 CNDIE----TARRLFELAPQ 258
>29584.m000246 basic helix-loop-helix-containingprotein, putative
Length = 310
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 154/231 (66%), Gaps = 1/231 (0%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
+K+VF +MPER++ +W MV L + GD+ +AR++FD MPE++ ++ +I GY+K+ D+
Sbjct: 64 SKKVFDEMPERDIFAWATMVTSLARIGDMSSARRLFDMMPEKNTAAWNTLIYGYSKLRDL 123
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
SA LF + +RD W+ +++ YAQN EAL +F M + PDE M +++SAC
Sbjct: 124 ESAEFLFSQMHERDIISWTTMVNCYAQNKKFGEALVVFNQMIKTGICPDEVTMATVISAC 183
Query: 123 SQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSY 182
+ +G LDL K + Y+ Q+ D+ ++ ++LIDM AKCG++DR+ +F ++ +++LF +
Sbjct: 184 AHLGALDLGKEIHLYVMQNGFDL-DVYIGSSLIDMYAKCGSLDRSLLVFFKLQEKNLFCW 242
Query: 183 CSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEG 233
S+I+GL+ HGYA++A+ +F KM E + P+ F +L AC+H LVEEG
Sbjct: 243 NSVIEGLAAHGYAKEALEMFRKMGREKIKPNGVTFISVLNACAHAGLVEEG 293
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 89/199 (44%), Gaps = 13/199 (6%)
Query: 107 NVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDR 166
+ P Y SL+ AC + + V ++ + ++ V AL+D + G +
Sbjct: 5 KILPSSYTFSSLIKACGLASEVKFGEVVHGHVWRHGLE-SHVFVQTALVDFYSTVGRIIE 63
Query: 167 ANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH 226
+ K+F+EMP+RD+F++ +M+ L+ G A LF+ M + + AA+ ++ S
Sbjct: 64 SKKVFDEMPERDIFAWATMVTSLARIGDMSSARRLFDMMPEK----NTAAWNTLIYGYSK 119
Query: 227 GRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM---PVESHAS 283
R +E + F M + + + MV+ +++ + EA + M +
Sbjct: 120 LRDLESAEFLFSQMHERDII-----SWTTMVNCYAQNKKFGEALVVFNQMIKTGICPDEV 174
Query: 284 AWGALLGACKFYGEVELGE 302
++ AC G ++LG+
Sbjct: 175 TMATVISACAHLGALDLGK 193
>48562.m000006 pentatricopeptide repeat-containing protein, putative
Length = 519
Score = 198 bits (504), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 170/281 (60%), Gaps = 10/281 (3%)
Query: 19 NAMVGGLVKGGDLINARKVFDD--MPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRD 76
NA++ K G + A+ + + + + +V++FT ++DGY K+G+I AR +FD D
Sbjct: 243 NALISMYAKTGGVEIAQSIVEQSGISDLNVIAFTALLDGYVKLGNITPARHIFDSLKDSD 302
Query: 77 AFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDC 136
W+ +I GY QNGL ++A+++F+ M +P+ + + +++S S V +L+ K +
Sbjct: 303 VVAWTAMIVGYVQNGLNDDAMELFRIMAKEGPRPNSFTLAAMLSVSSNVASLNHGKQIHA 362
Query: 137 YLSQSSIDIGQTHVVA---ALIDMNAKCGNMDRANKLFEEMPK-RDLFSYCSMIQGLSIH 192
S+I G+ V+ ALI M AK G++ A ++F + + +D S+ SMI L H
Sbjct: 363 ----SAIRSGENLSVSVGNALITMYAKAGSITDAQQVFNLIQRNKDTVSWTSMIIALGQH 418
Query: 193 GYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEH 252
G ++++ LF KML G+ PD+ + +L+AC+H LVE+G+ YF M S + + P+ H
Sbjct: 419 GLGQESIELFEKMLALGIKPDHITYVGVLSACTHVGLVEQGRGYFNLMTSIHKIEPTLSH 478
Query: 253 YACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACK 293
YACM+DL R+G L+EA+ +++MP+E AWG+LL +CK
Sbjct: 479 YACMIDLFGRAGLLQEAFSFIENMPIEPDVIAWGSLLSSCK 519
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 151/311 (48%), Gaps = 35/311 (11%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N+++ K GD + A+ VFD M R + S+ +MI + G A A F++ +RD
Sbjct: 111 NSLLNMYAKAGDSVMAKIVFDRMRLRSISSWNIMISLHMHGGRADLALAQFEQMSERDVV 170
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ +I+GY+Q+G EAL++F M ++KPD + + S++SAC+ + NL+L K + Y+
Sbjct: 171 TWNSMITGYSQHGFDKEALELFSRMLEDSLKPDRFTLASILSACANIENLNLGKQIHSYI 230
Query: 139 SQSSID------------------------------IGQTHVVA--ALIDMNAKCGNMDR 166
++ D I +V+A AL+D K GN+
Sbjct: 231 IRTEFDISGVVQNALISMYAKTGGVEIAQSIVEQSGISDLNVIAFTALLDGYVKLGNITP 290
Query: 167 ANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH 226
A +F+ + D+ ++ +MI G +G + A+ LF M EG P++ +L+ S+
Sbjct: 291 ARHIFDSLKDSDVVAWTAMIVGYVQNGLNDDAMELFRIMAKEGPRPNSFTLAAMLSVSSN 350
Query: 227 GRLVEEGKH-YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAW 285
+ GK + ++S ++ S + ++ + +++G + +A ++ + +W
Sbjct: 351 VASLNHGKQIHASAIRSGENLSVSVGN--ALITMYAKAGSITDAQQVFNLIQRNKDTVSW 408
Query: 286 GALLGACKFYG 296
+++ A +G
Sbjct: 409 TSMIIALGQHG 419
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 152/331 (45%), Gaps = 72/331 (21%)
Query: 10 MPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALF 69
MP + SWN ++ G K G L A VFD++P+RD VS+T MI GY ++G S
Sbjct: 1 MPVKTTFSWNTILTGYAKLGTLAKAHSVFDEIPDRDSVSWTTMIVGYNQMGRFES----- 55
Query: 70 DKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLD 129
A+K+F M V P ++ + ++ ++C+ +G LD
Sbjct: 56 --------------------------AIKMFVAMMKDKVLPTQFTVTNVFASCAALGALD 89
Query: 130 LAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGN-------------------------- 163
+ K + ++ + + G V +L++M AK G+
Sbjct: 90 IGKKIHSFVIKLGLS-GCVPVANSLLNMYAKAGDSVMAKIVFDRMRLRSISSWNIMISLH 148
Query: 164 -----MDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFT 218
D A FE+M +RD+ ++ SMI G S HG+ ++A+ LF++ML + L PD
Sbjct: 149 MHGGRADLALAQFEQMSERDVVTWNSMITGYSQHGFDKEALELFSRMLEDSLKPDRFTLA 208
Query: 219 VILTACSHGRLVEEGKHYFE-TMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP 277
IL+AC++ + GK +++++ + ++ ++ + +++G ++ A +++
Sbjct: 209 SILSACANIENLNLGKQIHSYIIRTEFDISGVVQN--ALISMYAKTGGVEIAQSIVEQSG 266
Query: 278 VES-HASAWGALLGACKFYGEVELGEIVANR 307
+ + A+ ALL G V+LG I R
Sbjct: 267 ISDLNVIAFTALLD-----GYVKLGNITPAR 292
>29676.m001663 pentatricopeptide repeat-containing protein, putative
Length = 704
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 173/306 (56%), Gaps = 3/306 (0%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
++ Y + D+ +AR +F ++D LW+ +I G+ + G A+K+F M K D
Sbjct: 354 LLSMYFRNSDVEAARGVFSLMEEKDVVLWTEMIMGHCRLGDGESAIKLFCKMRQEGHKSD 413
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
+ + +S C+ + L + + ++ + + V +L+DM AK GN+ A +F
Sbjct: 414 SFALSGALSVCADLAILKQGQMLHTQAVKTGCE-AEISVCGSLVDMYAKNGNLQAAQLIF 472
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
++ DL + SMI G S HG AE+AV LF ++L GL PD F +L+AC+H LVE
Sbjct: 473 SQVCNPDLKCWNSMIGGYSHHGMAEEAVMLFAEVLECGLTPDQVTFLSLLSACNHSGLVE 532
Query: 232 EGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELL-KSMPVESHASAWGALLG 290
+GK ++ MK K + P P+HY+CMV LLSR+G L EA EL+ +S E H W LL
Sbjct: 533 KGKFLWDYMK-KNGITPGPKHYSCMVSLLSRAGLLDEAEELITESTCSEEHLKLWRTLLS 591
Query: 291 ACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKL 350
+C + +G A ++ L+PE+S+ Y+LLS++YA +W V+ ++ K++ L K
Sbjct: 592 SCVNRRNLTVGARAAKQVLRLDPEDSATYILLSNLYAVTGRWDGVAELRKKIRGLMLEKD 651
Query: 351 PGCSWI 356
PG SWI
Sbjct: 652 PGVSWI 657
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 42/274 (15%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLIN-ARKVFDDM------PE----------- 43
+A+++F +MP +N S+NA++ + + K+F DM P
Sbjct: 61 DAQKLFDRMPRKNAISYNALIAAYCRDSSYETLSFKLFSDMGIQRLRPNGATFTSLLQVC 120
Query: 44 ----------------------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
D+ T+++ Y+ GD+ SA +F A ++D W+
Sbjct: 121 CLLEDWFLGSTLHGQVLQFGYVNDICVQTMLLGMYSDCGDLESACKVFGYAVEKDDVFWN 180
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+ISGY +N E+L +F M ++ ++ACS++G + + + S
Sbjct: 181 SMISGYLKNDRIKESLSLFGEMVRSGTIFTQFTCSMALNACSKLGYYSQGRIIHAQVIVS 240
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+I + + + AL+DM CG+ A LF + L S+ SMI + + E+A+GL
Sbjct: 241 NI-LPDSALQNALLDMYYSCGDRRTALTLFSRIQIPSLISWNSMISWFAKNEEGEKAMGL 299
Query: 202 FNKMLNEGLI-PDNAAFTVILTACSHGRLVEEGK 234
F K+L PD FT I++A R + G+
Sbjct: 300 FVKLLGMSTCKPDEYTFTAIISATGEFRATDYGQ 333
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 115/252 (45%), Gaps = 7/252 (2%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQN-GLPNEALKIFQGMELMNVKP 110
+I YA G + A+ LFD+ P+++A ++ LI+ Y ++ + K+F M + ++P
Sbjct: 49 LIAMYAHCGSRSDAQKLFDRMPRKNAISYNALIAAYCRDSSYETLSFKLFSDMGIQRLRP 108
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
+ SL+ C + + L + + Q + V L+ M + CG+++ A K+
Sbjct: 109 NGATFTSLLQVCCLLEDWFLGSTLHGQVLQFGY-VNDICVQTMLLGMYSDCGDLESACKV 167
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLV 230
F ++D + SMI G + ++++ LF +M+ G I ++ L ACS
Sbjct: 168 FGYAVEKDDVFWNSMISGYLKNDRIKESLSLFGEMVRSGTIFTQFTCSMALNACSKLGYY 227
Query: 231 EEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLG 290
+G+ +++P ++D+ G + A L + + S S W +++
Sbjct: 228 SQGR-IIHAQVIVSNILPDSALQNALLDMYYSCGDRRTALTLFSRIQIPSLIS-WNSMI- 284
Query: 291 ACKFYGEVELGE 302
++ + E GE
Sbjct: 285 --SWFAKNEEGE 294
>29596.m000694 pentatricopeptide repeat-containing protein, putative
Length = 687
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 200/408 (49%), Gaps = 55/408 (13%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV--SFTV------- 51
D++ VF + E+N+ SW A++ + G + F++M D+ FT+
Sbjct: 227 DSSINVFQSIGEKNVISWTAVISACGENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLSLC 286
Query: 52 -----MIDG-------------------------YAKVGDIASARALFDKAPKRDAFLWS 81
++ G Y K G + A+ LF K + W+
Sbjct: 287 CVTLALVLGRLVHSLSIKLGYQYNLRITNSIMYLYLKCGHMDEAQILFHKMGSTNLVTWN 346
Query: 82 VLISGYAQ-------------NGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNL 128
+ISG+AQ +G+ EAL IF + KPD + + S+++ CS++ L
Sbjct: 347 AMISGHAQAMDLAKDDFSAQRSGI--EALSIFLELNRTGKKPDLFTLSSVLTVCSRLSAL 404
Query: 129 DLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQG 188
+ + +S + V AL++M +KCG++ +A+K F EM R L S+ +MI G
Sbjct: 405 GQGEQLHAQTIKSGY-LSDVVVGTALVNMYSKCGSIGKASKAFVEMSTRTLISWTTMITG 463
Query: 189 LSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVP 248
L+ HG++EQA+ LF M G+ P+ F +L AC H +V+E YFE M+ +Y + P
Sbjct: 464 LAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAACCHSGMVDEALGYFEMMQKEYRIKP 523
Query: 249 SPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRL 308
+HY C++ + + +L EA++++ M E W L+ C+ G+ ELG A +L
Sbjct: 524 VMDHYGCLIAMFVKLRRLDEAFDIINKMDFEPSEFIWSILIAGCRNLGKQELGFYAAEQL 583
Query: 309 FELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+L+ +++ YV L ++Y +A +W DVS V+ MKE L K SWI
Sbjct: 584 LKLKLKDTETYVTLLNMYISAKRWQDVSRVRKLMKEEKLGKFNDWSWI 631
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 100/182 (54%), Gaps = 1/182 (0%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
+D+ T +++ YAK G + +AR +FD +R+ W+ L++GY QN PN A+ +FQ
Sbjct: 106 HKDLAVMTSLVNVYAKCGAMGNARKIFDSLHRRNVVAWTALMTGYVQNSQPNIAIDVFQD 165
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
M P Y + ++ACS + ++ L K + ++ + +D + + AL + +K G
Sbjct: 166 MLESGTLPSNYTLGIALNACSAINSIKLGKQLHAFVIKYKLDYDPS-IGNALCSLYSKLG 224
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
++D + +F+ + ++++ S+ ++I +G A + FN+ML E + P+ T +L+
Sbjct: 225 SLDSSINVFQSIGEKNVISWTAVISACGENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLS 284
Query: 223 AC 224
C
Sbjct: 285 LC 286
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 156/363 (42%), Gaps = 65/363 (17%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE------------------ 43
NA+++F + RN+ +W A++ G V+ A VF DM E
Sbjct: 127 NARKIFDSLHRRNVVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACS 186
Query: 44 --------RDVVSFTV-------------MIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+ + +F + + Y+K+G + S+ +F +++ W+
Sbjct: 187 AINSIKLGKQLHAFVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTA 246
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+IS +NG L+ F M L ++KP+E+ + +++S C L L + V S
Sbjct: 247 VISACGENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSL----S 302
Query: 143 IDIGQTH---VVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQG----------- 188
I +G + + +++ + KCG+MD A LF +M +L ++ +MI G
Sbjct: 303 IKLGYQYNLRITNSIMYLYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLAKDD 362
Query: 189 LSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH-YFETMKSKYSMV 247
S +A+ +F ++ G PD + +LT CS + +G+ + +T+KS Y +
Sbjct: 363 FSAQRSGIEALSIFLELNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGY--L 420
Query: 248 PSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANR 307
+V++ S+ G + +A + M + S W ++ +G E A +
Sbjct: 421 SDVVVGTALVNMYSKCGSIGKASKAFVEMSTRTLIS-WTTMITGLAQHGHSE----QALQ 475
Query: 308 LFE 310
LFE
Sbjct: 476 LFE 478
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 111/224 (49%), Gaps = 19/224 (8%)
Query: 108 VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTH----VVAALIDMNAKCGN 163
++P Y+ L+ C++ ++ A+ + ++ ++ TH V+ +L+++ AKCG
Sbjct: 72 IEPSYYL--PLLQECTKKNSVSEAQVIHAHIIKTG-----THKDLAVMTSLVNVYAKCGA 124
Query: 164 MDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
M A K+F+ + +R++ ++ +++ G + A+ +F ML G +P N + L A
Sbjct: 125 MGNARKIFDSLHRRNVVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNA 184
Query: 224 CSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESH 281
CS ++ GK H F +K K PS + C L S+ G L + + +S+ E +
Sbjct: 185 CSAINSIKLGKQLHAF-VIKYKLDYDPSIGNALC--SLYSKLGSLDSSINVFQSIG-EKN 240
Query: 282 ASAWGALLGACKFYGEVELGEIVANRLF--ELEPENSSPYVLLS 323
+W A++ AC G+ +G N + +++P + +LS
Sbjct: 241 VISWTAVISACGENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLS 284
>29726.m004020 pentatricopeptide repeat-containing protein, putative
Length = 406
Score = 191 bits (485), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/277 (35%), Positives = 163/277 (58%), Gaps = 4/277 (1%)
Query: 83 LISGYAQNGLPNEALKIF-QGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I+ YAQN NEAL++F Q L+ + + +++ S+++AC+ +G L K + +S
Sbjct: 1 MIAAYAQNARGNEALEVFRQFNSLVQERSNHFMLASVINACASLGKLVSGKVAHGAVIRS 60
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
++ V +AL+DM AKCG ++K+F ++P + Y SMI G + +G + ++ L
Sbjct: 61 GYEVNDV-VASALVDMYAKCGCFSYSDKVFRQIPNPSIIPYTSMIAGAAKYGLGKVSLQL 119
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F M+ + P++ F +L ACSH LV EG + +M K+ ++P +HY C+VD+LS
Sbjct: 120 FEDMVRRRIKPNDVTFVGVLHACSHSGLVNEGLQHLNSMYGKHGIMPDVKHYTCVVDMLS 179
Query: 262 RSGQLKEAYELLKSMPVESHASA--WGALLGACKFYGEVELGEIVANRLFELEPENSSPY 319
RSG+L EAY+L KS+ V A WG LL A + G V++ + L E + + Y
Sbjct: 180 RSGRLDEAYQLAKSIRVNPSEGALLWGTLLSASRLQGRVDVAVEASKWLIESNQQVAGTY 239
Query: 320 VLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
V LS+ YA A +W + +++++MK G+ K PGCSW+
Sbjct: 240 VTLSNTYALAGEWENAYYLRSQMKRVGVYKEPGCSWV 276
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 87/188 (46%), Gaps = 11/188 (5%)
Query: 16 TSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKR 75
S +V G V G +I + +D V + ++D YAK G + + +F + P
Sbjct: 42 ASLGKLVSGKVAHGAVIRSGYEVND------VVASALVDMYAKCGCFSYSDKVFRQIPNP 95
Query: 76 DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA-KWV 134
++ +I+G A+ GL +L++F+ M +KP++ V ++ ACS G ++ + +
Sbjct: 96 SIIPYTSMIAGAAKYGLGKVSLQLFEDMVRRRIKPNDVTFVGVLHACSHSGLVNEGLQHL 155
Query: 135 DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM---PKRDLFSYCSMIQGLSI 191
+ + I H ++DM ++ G +D A +L + + P + +++ +
Sbjct: 156 NSMYGKHGIMPDVKH-YTCVVDMLSRSGRLDEAYQLAKSIRVNPSEGALLWGTLLSASRL 214
Query: 192 HGYAEQAV 199
G + AV
Sbjct: 215 QGRVDVAV 222
>29841.m002890 pentatricopeptide repeat-containing protein, putative
Length = 512
Score = 191 bits (485), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 143/224 (63%), Gaps = 1/224 (0%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK 71
+ NL NA++ G++ A +F+ M RDV+S+T ++ G+A +G + AR FD+
Sbjct: 221 QSNLIVENALIDMYAACGEMSVALGIFESMKSRDVISWTAIVTGFANIGQLDIARKYFDQ 280
Query: 72 APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA 131
P+RD W+ +I GY Q EAL +F M+ NVKPDE+ MVS+++AC+Q+G L+L
Sbjct: 281 MPERDYVSWTAMIDGYLQVNCFKEALVLFHEMQTSNVKPDEFTMVSILTACAQLGALELG 340
Query: 132 KWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSI 191
+WV Y+ ++ + +V ALIDM KCGN+++A +F MP+ D F++ +MI GL+I
Sbjct: 341 EWVRTYIDKNKVK-NDAYVGNALIDMYFKCGNVEKARSIFNSMPRPDKFTWTAMIVGLAI 399
Query: 192 HGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
+GY E+A+ +F +ML + PD + +L AC+H +V+EG++
Sbjct: 400 NGYGEEALDMFVQMLKASVTPDEITYVGVLCACTHTGMVDEGRN 443
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 160/378 (42%), Gaps = 83/378 (21%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV----SFTVMIDGYAK 58
A+++F +PE + WN M+ G + ++ DM + DV+ ++ +I G+ K
Sbjct: 41 ARQLFDTIPEPTVFHWNTMLKGYSRIDSPKLGVSMYLDMLKNDVLPDCYTYPFLIKGFKK 100
Query: 59 VGDIA-------------------------------------SARALFDKAPKRDAFLWS 81
DIA AR +FD + K D W+
Sbjct: 101 --DIAFEYGKELHCHVVKYGLGSNVFVQNALINMYSLCGLTDMARGIFDMSYKTDVVTWN 158
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+IS Y + ++ +F ME V P +VS++SACS++ +L+ + V Y+S
Sbjct: 159 AMISAYNRIKQYDKTKTLFHEMEKKRVLPSSVTLVSVLSACSKLKDLESGQKVHKYISDH 218
Query: 142 SIDIGQTHVVA--ALIDMNAKCGNM-------------------------------DRAN 168
+ Q++++ ALIDM A CG M D A
Sbjct: 219 VV---QSNLIVENALIDMYAACGEMSVALGIFESMKSRDVISWTAIVTGFANIGQLDIAR 275
Query: 169 KLFEEMPKRDLFSYCSMIQG-LSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHG 227
K F++MP+RD S+ +MI G L ++ + E A+ LF++M + PD ILTAC+
Sbjct: 276 KYFDQMPERDYVSWTAMIDGYLQVNCFKE-ALVLFHEMQTSNVKPDEFTMVSILTACAQL 334
Query: 228 RLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGA 287
+E G+ + T K + ++D+ + G +++A + SMP +
Sbjct: 335 GALELGE-WVRTYIDKNKVKNDAYVGNALIDMYFKCGNVEKARSIFNSMPRPDKFTWTAM 393
Query: 288 LLG-ACKFYGEVELGEIV 304
++G A YGE L V
Sbjct: 394 IVGLAINGYGEEALDMFV 411
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 132/283 (46%), Gaps = 12/283 (4%)
Query: 60 GDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLM 119
GD+ AR LFD P+ F W+ ++ GY++ P + ++ M +V PD Y L+
Sbjct: 36 GDMNYARQLFDTIPEPTVFHWNTMLKGYSRIDSPKLGVSMYLDMLKNDVLPDCYTYPFLI 95
Query: 120 SACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDL 179
+ + K + C++ + + V ALI+M + CG D A +F+ K D+
Sbjct: 96 KGFKKDIAFEYGKELHCHVVKYGLG-SNVFVQNALINMYSLCGLTDMARGIFDMSYKTDV 154
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFET 239
++ +MI + ++ LF++M + ++P + +L+ACS + +E G+ +
Sbjct: 155 VTWNAMISAYNRIKQYDKTKTLFHEMEKKRVLPSSVTLVSVLSACSKLKDLESGQKVHKY 214
Query: 240 MKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
+ S + + + ++D+ + G++ A + +SM S W A++ G+++
Sbjct: 215 I-SDHVVQSNLIVENALIDMYAACGEMSVALGIFESMKSRDVIS-WTAIVTGFANIGQLD 272
Query: 300 LGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKM 342
+A + F+ PE YV S A D +L V+ K +
Sbjct: 273 ----IARKYFDQMPERD--YV---SWTAMIDGYLQVNCFKEAL 306
>29333.m001091 transferase, transferring glycosyl groups, putative
Length = 810
Score = 191 bits (484), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 155/237 (65%), Gaps = 1/237 (0%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK 71
E ++ N++V GD+ A +F M + DVVS+T MI GY K GD+ SAR LFDK
Sbjct: 571 ENDVYVQNSLVNMYSNLGDIRAASYIFQTMSQLDVVSWTSMIAGYNKSGDVESARKLFDK 630
Query: 72 APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA 131
P+++ WS +ISGYA+N N+A++++ ++ V+ +E +MVS++S+C+ +G L+L
Sbjct: 631 MPEKNLVTWSTMISGYAKNNCFNKAIELYNVLQSEGVQANETVMVSVISSCAHLGALELG 690
Query: 132 KWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSI 191
+ Y+ ++ I + + AL+DM A+CG++D+A ++F+E+ ++D S+ ++I G ++
Sbjct: 691 EKAHDYVVRNKITVNLI-LGTALVDMYARCGSIDKAVQVFDELGEKDALSWTALIAGFAM 749
Query: 192 HGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVP 248
HG+AE+A+ F++M+ GL P + FT +L+ACSH LVE G FETMK Y + P
Sbjct: 750 HGHAEKALQYFSEMIRTGLTPRDITFTAVLSACSHRGLVERGMKIFETMKRDYCVEP 806
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 114/247 (46%), Gaps = 38/247 (15%)
Query: 86 GYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV----------- 134
GY+ + P ++ + + + + PD L+ AC+Q+G++D+
Sbjct: 513 GYSGSESPGQSFHFYIQSQRLGIFPDNLTYPFLVKACTQLGSIDMGMQAHGHVVRHGFEN 572
Query: 135 DCYLSQSSID-----------------IGQTHVVA--ALIDMNAKCGNMDRANKLFEEMP 175
D Y+ S ++ + Q VV+ ++I K G+++ A KLF++MP
Sbjct: 573 DVYVQNSLVNMYSNLGDIRAASYIFQTMSQLDVVSWTSMIAGYNKSGDVESARKLFDKMP 632
Query: 176 KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH---GRLVEE 232
+++L ++ +MI G + + +A+ L+N + +EG+ + ++++C+H L E+
Sbjct: 633 EKNLVTWSTMISGYAKNNCFNKAIELYNVLQSEGVQANETVMVSVISSCAHLGALELGEK 692
Query: 233 GKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGAC 292
Y K +++ +VD+ +R G + +A ++ + E A +W AL+
Sbjct: 693 AHDYVVRNKITVNLILG----TALVDMYARCGSIDKAVQVFDELG-EKDALSWTALIAGF 747
Query: 293 KFYGEVE 299
+G E
Sbjct: 748 AMHGHAE 754
>30146.m003515 pentatricopeptide repeat-containing protein, putative
Length = 546
Score = 188 bits (478), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/257 (37%), Positives = 157/257 (61%), Gaps = 4/257 (1%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N++V GD+ AR VFD MP +++VS+ M+DG AK G++ AR LFD P RD
Sbjct: 153 NSLVHMYASFGDISCARYVFDGMPVKNLVSWNSMVDGSAKCGNMVLARQLFDLMPDRDVL 212
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
WS LI GY +NG +A+ +F M + KP+E MVS++ AC+ +G LD + + Y+
Sbjct: 213 SWSSLIDGYVKNGDYGDAMVVFDKMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 272
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR--DLFSYCSMIQGLSIHGYAE 196
+ + + + +L+DM AKCG ++ A +F +P D+ + +MI GL+ HG +
Sbjct: 273 IDNKLPLTLV-LCTSLVDMYAKCGAINEAFDVFRGIPAELSDVLLWNAMIGGLATHGLVK 331
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACM 256
+++ LF +M G+ PD + +L AC+HG LV+E ++F+ + K+ M EHYAC+
Sbjct: 332 ESLDLFKEMNFVGVKPDEITYLSLLHACAHGGLVKEAWYFFDCL-GKHGMTLKIEHYACI 390
Query: 257 VDLLSRSGQLKEAYELL 273
VD+++R+GQ+ +AY+ L
Sbjct: 391 VDVMARAGQIAKAYQFL 407
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 122/256 (47%), Gaps = 38/256 (14%)
Query: 78 FLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV--- 134
F W+ +I GY+++ PN ++ +F M + V PD L+ A +++ +L +
Sbjct: 80 FNWNTVIRGYSKSKNPNGSISVFIQMLKVGVFPDYLTYPFLVKASARLLKRELGFSIHAH 139
Query: 135 --------DCYLSQSSI-------DIGQTHVV------------AALIDMNAKCGNMDRA 167
D ++S S + DI V +++D +AKCGNM A
Sbjct: 140 IIKHGFESDRFISNSLVHMYASFGDISCARYVFDGMPVKNLVSWNSMVDGSAKCGNMVLA 199
Query: 168 NKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHG 227
+LF+ MP RD+ S+ S+I G +G A+ +F+KM G P+ +L AC+H
Sbjct: 200 RQLFDLMPDRDVLSWSSLIDGYVKNGDYGDAMVVFDKMRVSGPKPNEVTMVSVLCACAHL 259
Query: 228 RLVEEGK---HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVE-SHAS 283
+++G+ HY K ++V +VD+ ++ G + EA+++ + +P E S
Sbjct: 260 GALDKGRMMHHYVIDNKLPLTLVLCTS----LVDMYAKCGAINEAFDVFRGIPAELSDVL 315
Query: 284 AWGALLGACKFYGEVE 299
W A++G +G V+
Sbjct: 316 LWNAMIGGLATHGLVK 331
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 46/214 (21%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM----PERDVVSF--------- 49
A+++F MP+R++ SW++++ G VK GD +A VFD M P+ + V+
Sbjct: 199 ARQLFDLMPDRDVLSWSSLIDGYVKNGDYGDAMVVFDKMRVSGPKPNEVTMVSVLCACAH 258
Query: 50 --------------------------TVMIDGYAKVGDIASARALFDKAPKR--DAFLWS 81
T ++D YAK G I A +F P D LW+
Sbjct: 259 LGALDKGRMMHHYVIDNKLPLTLVLCTSLVDMYAKCGAINEAFDVFRGIPAELSDVLLWN 318
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKW--VDCYLS 139
+I G A +GL E+L +F+ M + VKPDE +SL+ AC+ G L W DC L
Sbjct: 319 AMIGGLATHGLVKESLDLFKEMNFVGVKPDEITYLSLLHACAH-GGLVKEAWYFFDC-LG 376
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEE 173
+ + + H A ++D+ A+ G + +A +
Sbjct: 377 KHGMTLKIEH-YACIVDVMARAGQIAKAYQFLSR 409
>28649.m000213 pentatricopeptide repeat-containing protein, putative
Length = 480
Score = 187 bits (474), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 163/260 (62%), Gaps = 6/260 (2%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A+ +F +R++ +W+A+ G + G+L AR++FD+MP +D+V++ V+I Y K G++
Sbjct: 167 AREMFDDSAKRDVVAWSALTAGYARRGELCMARRLFDEMPVKDLVAWNVIITAYVKRGEM 226
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
A AR LF++ P+RD W+ +I+G+ G +AL++F+ M + +PDE M+SL+SAC
Sbjct: 227 ACARKLFNEVPRRDVVTWNAMIAGFVHCGENEQALEMFEEMISVGEQPDEVTMLSLLSAC 286
Query: 123 SQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSY 182
+ +G+L++ K V + + S+ + AL M AKCG+++RA ++F M ++D+ ++
Sbjct: 287 TDLGDLEVGKKVHSSILEMSLGDLSVLLGNALTYMYAKCGSIERALEVFRGMREKDVTTW 346
Query: 183 CSMIQGLSIHGYAEQAVGLFNKMLN-EGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
S+I GL++HG+AE+++ LF +M + P+ F +L ACSH VEEG+ YF+ M
Sbjct: 347 NSVIVGLALHGHAEESIHLFREMQRLNNIKPNEITFVGVLVACSHAGKVEEGQRYFDLMT 406
Query: 242 SKYSM-----VPSPEHYACM 256
+ Y + + + H C+
Sbjct: 407 NLYILAGFLRIENSHHSGCL 426
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 127/257 (49%), Gaps = 17/257 (6%)
Query: 60 GDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLM 119
G I A LFD+ + D F+W+ ++ G +Q+ P +A+ ++ ME +KPD++ L+
Sbjct: 61 GTIDYAHQLFDQVAEPDIFMWNTMMRGSSQSPSPIKAVSLYTQMENCGIKPDKFTFSFLL 120
Query: 120 SACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDL 179
AC+++ ++ + + T V L+ +AKCG++ A ++F++ KRD+
Sbjct: 121 KACTRLEWRNMGFCIHGKALKHGFQ-ENTFVRNTLVYYHAKCGDLGIAREMFDDSAKRDV 179
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFET 239
++ ++ G + G A LF++M + D A+ VI+TA V+ G+
Sbjct: 180 VAWSALTAGYARRGELCMARRLFDEM----PVKDLVAWNVIITA-----YVKRGE--MAC 228
Query: 240 MKSKYSMVPSPE--HYACMVDLLSRSGQLKEAYELLKSMPV---ESHASAWGALLGACKF 294
+ ++ VP + + M+ G+ ++A E+ + M + +LL AC
Sbjct: 229 ARKLFNEVPRRDVVTWNAMIAGFVHCGENEQALEMFEEMISVGEQPDEVTMLSLLSACTD 288
Query: 295 YGEVELGEIVANRLFEL 311
G++E+G+ V + + E+
Sbjct: 289 LGDLEVGKKVHSSILEM 305
>28838.m000257 Cell division protein ftsH, putative
Length = 1157
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 168/316 (53%), Gaps = 5/316 (1%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
DV +++ Y I A +FD+ P+R W+ +I+ ++ EA++ F M
Sbjct: 798 DVYVNNNLVNFYGSCKKILDACKVFDEMPERTVVSWNAVITSCVESLKLGEAIRYFLKMR 857
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
+PD MV ++ C+++GNL L +W+ + + + + + AL+DM AK G +
Sbjct: 858 DFGFEPDGTTMVLMLVICAEMGNLGLGRWIHSQVIERGL-VLNYQLGTALVDMYAKSGAV 916
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLI-PDNAAFTVILTA 223
A +F+ M +++++++ +MI GL+ HG+A++ + LF M+ LI P+ F +L A
Sbjct: 917 GYAKLVFDRMKEKNVWTWSAMILGLAQHGFAKEGLELFLDMMRSSLIHPNYVTFLGVLCA 976
Query: 224 CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHAS 283
CSH LV +G YF M Y + P HY MVD+L R+G LKEAY + MP +
Sbjct: 977 CSHAGLVSDGFRYFHEMGHTYGIKPMMVHYGAMVDILGRAGLLKEAYNFITKMPFQPDPI 1036
Query: 284 AWGALLGACKFY---GEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKN 340
W LL AC + + V RL ELEP S +V+++++YA A W + V+
Sbjct: 1037 VWRTLLSACSIHDVKDSTGVAYKVRKRLLELEPRRSGNFVMVANMYADAGMWEKAAKVRR 1096
Query: 341 KMKERGLRKLPGCSWI 356
M++ GL+K G S +
Sbjct: 1097 VMRDGGLKKKAGESCV 1112
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 107/229 (46%), Gaps = 3/229 (1%)
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
D++ A+++ D + W++LI GYA + P +AL +++ M ++P+ L+
Sbjct: 713 DLSYAQSILDHSVHPVPLPWNILIRGYADSNTPKDALFVYRNMRNEGIRPNSLTFPFLLK 772
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
AC+ K V + + +D +V L++ C + A K+F+EMP+R +
Sbjct: 773 ACAACFATKEGKQVHVEVIKYGLDC-DVYVNNNLVNFYGSCKKILDACKVFDEMPERTVV 831
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
S+ ++I +A+ F KM + G PD ++L C+ + G+ + +
Sbjct: 832 SWNAVITSCVESLKLGEAIRYFLKMRDFGFEPDGTTMVLMLVICAEMGNLGLGR-WIHSQ 890
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
+ +V + + +VD+ ++SG + A + M E + W A++
Sbjct: 891 VIERGLVLNYQLGTALVDMYAKSGAVGYAKLVFDRMK-EKNVWTWSAMI 938
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 103/235 (43%), Gaps = 47/235 (20%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKG--------------------------------- 28
+A +VF +MPER + SWNA++ V+
Sbjct: 817 DACKVFDEMPERTVVSWNAVITSCVESLKLGEAIRYFLKMRDFGFEPDGTTMVLMLVICA 876
Query: 29 --GDLINARKVFDDMPERDVV----SFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
G+L R + + ER +V T ++D YAK G + A+ +FD+ +++ + WS
Sbjct: 877 EMGNLGLGRWIHSQVIERGLVLNYQLGTALVDMYAKSGAVGYAKLVFDRMKEKNVWTWSA 936
Query: 83 LISGYAQNGLPNEALKIFQGMELMN---VKPDEYIMVSLMSACSQVGNL-DLAKWVDCYL 138
+I G AQ+G E L++F +++M + P+ + ++ ACS G + D ++
Sbjct: 937 MILGLAQHGFAKEGLELF--LDMMRSSLIHPNYVTFLGVLCACSHAGLVSDGFRYFHEMG 994
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIH 192
I H A++D+ + G + A +MP + D + +++ SIH
Sbjct: 995 HTYGIKPMMVH-YGAMVDILGRAGLLKEAYNFITKMPFQPDPIVWRTLLSACSIH 1048
>29761.m000423 pentatricopeptide repeat-containing protein, putative
Length = 752
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 190/395 (48%), Gaps = 42/395 (10%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSF------------- 49
A+R+F M E+NL SW A++ G + G A F + + ++F
Sbjct: 323 AERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCS 382
Query: 50 ---------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
T ++D YAK + SAR +FD + ++
Sbjct: 383 DCNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNA 442
Query: 83 LISGYAQN-GLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+++G+ ++ G + + +F + L VKPD L+S + +L+ + Y ++
Sbjct: 443 ILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKT 502
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
D V ++I M AKCG+++ A+++F M RD S+ ++I ++HG A++++ L
Sbjct: 503 GFDT-NISVANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHGQAQKSLFL 561
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F +M +G PD IL AC++ L ++G F M+ KY + P EHYACM DLL
Sbjct: 562 FEEMKRKGFDPDEFTILAILQACTYSGLWKDGICLFNLMEPKYGIKPLLEHYACMADLLG 621
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVL 321
R+G L EA +++K P W L+ CK +G + G++ + L +L P + Y+L
Sbjct: 622 RAGYLSEAMDIIKRSPFPKSTLLWRTLVNVCKLHGNLNFGKLASKHLLDLSPVEAGSYIL 681
Query: 322 LSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+S++YA+ + + V+ M + RK G SWI
Sbjct: 682 VSNMYASEKMSDEAAKVRKVMNDLKFRKEAGSSWI 716
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 3/234 (1%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
Y K + A+ +FD+ R+ W+ LI GY ++ A I M +E+
Sbjct: 112 YVKFNRLDLAQKVFDRMRTRNTITWTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTC 171
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
++ ACS + L + + C++ +S D V +LI M K G D A K+F+ M
Sbjct: 172 TVILQACSSPDDRILGEQIHCFVIKSGFD-ENVFVGTSLIAMYTKSGFFDVAEKVFDSMG 230
Query: 176 KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
+D+ MI G +A+ +F +LN+G P + FT I++ C+ VEEGK
Sbjct: 231 FKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQ 290
Query: 236 YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
+ + KY + ++ + SG KEA + SM E + +W AL+
Sbjct: 291 -LQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMS-EKNLISWTALI 342
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 138/285 (48%), Gaps = 40/285 (14%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
NA++ G A ++F M E++++S+T +I GY++ G +A+ DAF
Sbjct: 308 NAIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGYSRSG--YGKKAV-------DAF 358
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
L GL +E + + D ++ +++ CS NL+L + ++
Sbjct: 359 L-----------GLHDE----------LGINFDSTLLTAILDCCSDCNNLELGLQIHGFV 397
Query: 139 SQ--SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQG-LSIHGYA 195
+ + D+ +V AL+D+ AKC + A +F+ + + + S+ +++ G L G
Sbjct: 398 MKLGCACDV---NVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSGDE 454
Query: 196 EQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE-TMKSKYSMVPSPEHYA 254
E + LFN++ G+ PD F+ +L+ ++ +E+G+ + T+K+ + S +
Sbjct: 455 EDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVAN-- 512
Query: 255 CMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
++ + ++ G +++A+++ M S W AL+ A +G+ +
Sbjct: 513 SVISMYAKCGSIEDAHQMFNIMNCRDSIS-WNALISAYALHGQAQ 556
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 142/348 (40%), Gaps = 42/348 (12%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP------------------ 42
D A++VF +M RN +W +++ G ++ D +A + DM
Sbjct: 119 DLAQKVFDRMRTRNTITWTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQAC 178
Query: 43 ---------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ +V T +I Y K G A +FD +D +
Sbjct: 179 SSPDDRILGEQIHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLN 238
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I Y + G +A+++F+ + +P +Y +++S C+ ++ K + +
Sbjct: 239 FMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKY 298
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ +T V A+I M G A ++F M +++L S+ ++I G S GY ++AV
Sbjct: 299 GF-LSETSVGNAIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGYSRSGYGKKAVDA 357
Query: 202 FNKMLNE-GLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
F + +E G+ D+ T IL CS +E G K +VDL
Sbjct: 358 FLGLHDELGINFDSTLLTAILDCCSDCNNLELGLQ-IHGFVMKLGCACDVNVATALVDLY 416
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRL 308
++ +L+ A + + + AS L G + G+ E I+ N+L
Sbjct: 417 AKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSGDEEDPMILFNQL 464
>28256.m000142 pentatricopeptide repeat-containing protein, putative
Length = 631
Score = 184 bits (467), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 205/439 (46%), Gaps = 86/439 (19%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE------------------ 43
+A+++F M +RN+ SW AM+ G ++ A K+F +M
Sbjct: 195 SARKLFDGMADRNVISWTAMIAGYMQNSFDREAVKLFIEMTRLGRRPDGFVCTSILTSCG 254
Query: 44 --------RDVVSFTV-------------MIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
R V ++++ +ID YAK G + AR +FD R+ ++
Sbjct: 255 SLEALELGRQVHAYSIKGNVESDIFLQNGLIDMYAKCGSLNDARKVFDDMTIRNVVSYNA 314
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
LI GY+ +EA+ +F+ M + P VSL+ A + + L+L K + +++
Sbjct: 315 LIEGYSTLEQLSEAMNLFREMRHGMLSPSFLTFVSLLGASATLSALELGKQIHALITKFG 374
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
I + + +ALID +KC + A +F++M ++D+ + +M+ G + E+A+ L+
Sbjct: 375 ISM-EIFAGSALIDFYSKCSCLMDARLVFDKMTEKDIVVWNAMLFGYTQQLENEEALKLY 433
Query: 203 NKMLNEGLIPDNAAFTVILTACS------HGRL--------------------------- 229
++ P+ F + TA S HG+
Sbjct: 434 TELQISEPKPNVVTFAALTTAASNLASLQHGQQFHNHIIKTGLDSHPFTTNSLIDMYAKC 493
Query: 230 ------------VEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP 277
V++G HYFE+M K+S+ P EHYAC+V LL RSG+L EA E ++ MP
Sbjct: 494 GSLEDARKAFGHVKDGLHYFESMP-KFSIKPGTEHYACVVSLLGRSGKLYEAKEFIEKMP 552
Query: 278 VESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSH 337
E A W +LL AC+ G VELG+ A + ++ +S Y LLS+IYA+ W+DV
Sbjct: 553 TEPEAVVWRSLLSACRVSGNVELGKYAAEKAISIDSTDSGSYTLLSNIYASKGMWVDVKK 612
Query: 338 VKNKMKERGLRKLPGCSWI 356
V+ +M G+ K G SWI
Sbjct: 613 VRERMDIAGVVKEAGHSWI 631
Score = 130 bits (327), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 156/317 (49%), Gaps = 23/317 (7%)
Query: 5 RVFVQMPERNLTS----WNAMVGG-----LVKGGDLINARKVFDDMPERDVVSFTVMIDG 55
++F QM E N+ ++++G V+GG I+ V E DV V+ID
Sbjct: 128 QLFSQMRETNVVPDGYILSSVLGACSQLEFVQGGKQIHGH-VLRRGIEIDVSFVNVLIDF 186
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
Y K G + SAR LFD R+ W+ +I+GY QN EA+K+F M + +PD ++
Sbjct: 187 YTKSGKVQSARKLFDGMADRNVISWTAMIAGYMQNSFDREAVKLFIEMTRLGRRPDGFVC 246
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
S++++C + L+L + V Y + +++ + LIDM AKCG+++ A K+F++M
Sbjct: 247 TSILTSCGSLEALELGRQVHAYSIKGNVE-SDIFLQNGLIDMYAKCGSLNDARKVFDDMT 305
Query: 176 KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
R++ SY ++I+G S +A+ LF +M + L P F +L A + +E GK
Sbjct: 306 IRNVVSYNALIEGYSTLEQLSEAMNLFREMRHGMLSPSFLTFVSLLGASATLSALELGKQ 365
Query: 236 YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL------ 289
+ +K+ + + ++D S+ L +A + M E W A+L
Sbjct: 366 -IHALITKFGISMEIFAGSALIDFYSKCSCLMDARLVFDKM-TEKDIVVWNAMLFGYTQQ 423
Query: 290 ----GACKFYGEVELGE 302
A K Y E+++ E
Sbjct: 424 LENEEALKLYTELQISE 440
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 146/323 (45%), Gaps = 50/323 (15%)
Query: 10 MPERNLTSWNAMVGGLVKGGDLINARKVFDDMP--------------------------- 42
MPERNL SW+++V K G A VF D
Sbjct: 1 MPERNLISWSSVVSMYSKRGFSEEALLVFLDFKRCCNENPNEYILASVISACVQVGGSID 60
Query: 43 ------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQN 90
+R+V T ++D YAK G+I AR +FD ++ A W+ +I+ +
Sbjct: 61 KQMHGFAVKSGFDRNVYVGTSLVDLYAKGGNIDEARLVFDGLLEKSAVTWTTIITACVKR 120
Query: 91 GLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHV 150
G +L++F M NV PD YI+ S++ ACSQ+ + K + ++ + I+I
Sbjct: 121 GRSEVSLQLFSQMRETNVVPDGYILSSVLGACSQLEFVQGGKQIHGHVLRRGIEI-DVSF 179
Query: 151 VAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGL 210
V LID K G + A KLF+ M R++ S+ +MI G + + +AV LF +M G
Sbjct: 180 VNVLIDFYTKSGKVQSARKLFDGMADRNVISWTAMIAGYMQNSFDREAVKLFIEMTRLGR 239
Query: 211 IPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEH----YACMVDLLSRSGQL 266
PD T ILT+C +E G+ YS+ + E ++D+ ++ G L
Sbjct: 240 RPDGFVCTSILTSCGSLEALELGRQV-----HAYSIKGNVESDIFLQNGLIDMYAKCGSL 294
Query: 267 KEAYELLKSMPVESHASAWGALL 289
+A ++ M + + S + AL+
Sbjct: 295 NDARKVFDDMTIRNVVS-YNALI 316
>30174.m009141 pentatricopeptide repeat-containing protein, putative
Length = 336
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/254 (38%), Positives = 144/254 (56%), Gaps = 20/254 (7%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINA-------------------RKVFDDMP 42
+A ++F + + + +N M+ L+ G +NA R VFD++P
Sbjct: 60 HAWKIFQHIQQPTICIYNTMIKALLLKGFSVNAVVGNSLILMYCGFCNMRAARYVFDEIP 119
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
VVS+T+MI G+AKVGDI SAR FD AP++D + +ISGY QN E L +F
Sbjct: 120 GPCVVSWTLMISGFAKVGDIESARLFFDGAPRKDRGICGAMISGYVQNNCFKECLYMFSM 179
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
++L + PDE I +S++ AC+Q+G LD W+ Y+ + + + + LIDM AKCG
Sbjct: 180 IQLTDNVPDEGIFLSILCACAQLGALDTGIWIHRYMDRLGLPL-TIRLSTGLIDMYAKCG 238
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
N+D A LF+EMP+RD + MI GL++HG E A+ LF KM G PD+ F IL+
Sbjct: 239 NVDLAKSLFDEMPQRDTVCWNVMISGLAMHGDGEGAINLFLKMEEAGFKPDDVTFIAILS 298
Query: 223 ACSHGRLVEEGKHY 236
ACS+ + EG +
Sbjct: 299 ACSYSGMAYEGFSF 312
>29970.m001006 pentatricopeptide repeat-containing protein, putative
Length = 417
Score = 182 bits (461), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 146/242 (60%), Gaps = 3/242 (1%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK 71
+ +L +V +GGD ++AR +FD++PE+ +VS T MI +AK G + AR LFD
Sbjct: 160 DSDLYVRTCLVDVYARGGDFVSARNLFDEIPEKSLVSSTAMITCFAKHGMVKEARVLFDG 219
Query: 72 APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA 131
RD W+V+I GY Q+GL NE L +F+ M V+P E +++++SAC Q+G L+
Sbjct: 220 LEDRDLVCWNVMIDGYVQHGLANEGLVLFRQMLKDRVRPSEVTVLAVLSACGQIGALESG 279
Query: 132 KWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSI 191
+WV Y+ + I+I HV +ALIDM +KCGN++ A +FE + +D+ + SM+ G +
Sbjct: 280 RWVHSYIQNNGIEIN-AHVGSALIDMYSKCGNLEDARLVFERIKYKDVVVWNSMVTGYAT 338
Query: 192 HGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPE 251
HG+++ A+ LFN+M G P + F +L+AC H LV GK+ + M+ + S
Sbjct: 339 HGFSQDALQLFNEMCGLGYQPTDITFIGVLSACGHAGLV--GKNSSQAMQLQGSQKNRNS 396
Query: 252 HY 253
H+
Sbjct: 397 HH 398
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 111/261 (42%), Gaps = 38/261 (14%)
Query: 40 DMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKI 99
++ ++SF + Y+ +G + + LF++ + F ++ +I + + L +AL
Sbjct: 61 NLHHHPILSFKLQ-RSYSSLGHLNHSLTLFNQTQNPNVFFYTSIIHAHTFHKLHYQALLF 119
Query: 100 FQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNA 159
+ M V P+ + S++ +C L+ A+ + + +D +V L+D+ A
Sbjct: 120 YAQMLTQKVTPNAFTFSSILKSCP----LEFAQIIHAQAIKFGLD-SDLYVRTCLVDVYA 174
Query: 160 KCGNMDRANKLFEEMPK-------------------------------RDLFSYCSMIQG 188
+ G+ A LF+E+P+ RDL + MI G
Sbjct: 175 RGGDFVSARNLFDEIPEKSLVSSTAMITCFAKHGMVKEARVLFDGLEDRDLVCWNVMIDG 234
Query: 189 LSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVP 248
HG A + + LF +ML + + P +L+AC +E G+ + + +
Sbjct: 235 YVQHGLANEGLVLFRQMLKDRVRPSEVTVLAVLSACGQIGALESGR-WVHSYIQNNGIEI 293
Query: 249 SPEHYACMVDLLSRSGQLKEA 269
+ + ++D+ S+ G L++A
Sbjct: 294 NAHVGSALIDMYSKCGNLEDA 314
>30055.m001631 pentatricopeptide repeat-containing protein, putative
Length = 302
Score = 181 bits (458), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 165/281 (58%), Gaps = 8/281 (2%)
Query: 32 INARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNG 91
I+A+ + + + RD + + ++ YA + A LF ++ FL++ LI YA
Sbjct: 26 IHAQTITNGIYHRDFIR-SKLVSAYASCTQMRQAALLFSFTNRQTTFLFNSLIRAYASLN 84
Query: 92 LPNEALKIFQGMELMNVKP-DEYIMVSLMSACSQVGNLDLAKWVDCYL--SQSSIDIGQT 148
L + +L F+ M L KP D + + S++ +C+ + + L + V L + + D+ +
Sbjct: 85 LFSHSLSFFRRM-LDACKPIDRHTLPSVLKSCAGLSAVRLGQQVHGILLINGLAFDLANS 143
Query: 149 HVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE 208
+ ALI+M AKCGN+ A K+F+ MP R+ S+ +M+ G +HG + + LFN+M+ E
Sbjct: 144 N---ALINMYAKCGNLAGARKVFDRMPARNEVSWATMMAGYGMHGKGGEVLVLFNRMVEE 200
Query: 209 GLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKE 268
G D T +L+ACSHG +VE+G YF M+ ++ + PS EHY CMVD+L R+G+++E
Sbjct: 201 GSSVDAVCLTAVLSACSHGGMVEKGAEYFGMMEERFGVKPSLEHYTCMVDMLGRAGRVEE 260
Query: 269 AYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLF 309
A EL+ M ++ W ALLG+CK +G+V++ E V+ +F
Sbjct: 261 AEELVMRMEIKPDEVLWAALLGSCKIHGKVDVAERVSRNVF 301
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 37/159 (23%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP 73
+L + NA++ K G+L ARKVFD MP R+ VS+ M+ GY G LF++
Sbjct: 139 DLANSNALINMYAKCGNLAGARKVFDRMPARNEVSWATMMAGYGMHGKGGEVLVLFNRMV 198
Query: 74 KR----DAFLWSVLISGYAQNGLPNEALKIFQGME------------------------- 104
+ DA + ++S + G+ + + F ME
Sbjct: 199 EEGSSVDAVCLTAVLSACSHGGMVEKGAEYFGMMEERFGVKPSLEHYTCMVDMLGRAGRV 258
Query: 105 --------LMNVKPDEYIMVSLMSACSQVGNLDLAKWVD 135
M +KPDE + +L+ +C G +D+A+ V
Sbjct: 259 EEAEELVMRMEIKPDEVLWAALLGSCKIHGKVDVAERVS 297
>29813.m001493 pentatricopeptide repeat-containing protein, putative
Length = 290
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 155/301 (51%), Gaps = 44/301 (14%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
Y + D+ R +FDK + ++ +I YA++ PNEAL +F+ ++ +KP + IM
Sbjct: 2 YTECNDVDGTRRVFDKILEPCVISYNAIIMIYARSNRPNEALALFRKLQAKKLKPTDVIM 61
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
+S++ +C+ +G LDL KWV+ Y+ ++ D V ALI M AKCG++D A F+ M
Sbjct: 62 LSVLLSCAFLGALDLGKWVNEYVKKNGFD-KYVKVNTALISMYAKCGSLDDAISAFQNMR 120
Query: 176 KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
+ T H LV+EG
Sbjct: 121 VKH-------------------------------------------TETCHTGLVDEGLG 137
Query: 236 YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFY 295
YF +M Y ++P +HY C VDLLSR+G L EAY+ + +P++ W LL AC +
Sbjct: 138 YFYSMSDSYGIMPRIKHYGCTVDLLSRAGHLDEAYKFVDGLPIKPIPILWRTLLSACSSH 197
Query: 296 GEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSW 355
G +ELG+ V R+FEL+ + YV+LS++ A A +W DV ++ M +RG K+PGCS
Sbjct: 198 GNLELGKQVLERIFELDDSHGGDYVILSNMCARAGKWEDVDSLRKLMIDRGAVKIPGCSL 257
Query: 356 I 356
I
Sbjct: 258 I 258
>29648.m001934 pentatricopeptide repeat-containing protein, putative
Length = 524
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 199/398 (50%), Gaps = 47/398 (11%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGG------------------------------- 29
D A VF M E ++ +WN+++ G K G
Sbjct: 91 DYAFGVFFTMEEVDVITWNSLIIGCCKSGYGELALHQFCLMRSSGYSPDEFTCSAVITSC 150
Query: 30 ----DLINARKVFDDMPERDVVSFTVM----IDGYAKVGDIASARALFDKAPKRDAFLWS 81
+L +++F + +S T++ ID ++K + + LF++ + ++ L +
Sbjct: 151 SNLRNLDKGKQIFAFCLKVGFLSNTIVSSAAIDLFSKCNRLEDSVQLFEELDQLNSALCN 210
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+IS YA +G AL++F N++P E+ + S++S S ++ S
Sbjct: 211 SMISSYAGHGFGENALQLFVLALRENIRPTEFTISSVLSFISIFPPEQGTQF-----HSS 265
Query: 142 SIDIG---QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+ +G V ++L+ M K G +D A +F+ M RDL S+ +MI GL+ +G +A
Sbjct: 266 VVKLGFELDAIVASSLVQMYTKFGFIDYAMDIFKSMTVRDLISWNTMIMGLTQNGRVIEA 325
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+ F K+LN G PD +L ACS+G +EEG F +M+ Y ++PS EHYA +V+
Sbjct: 326 LDAFKKLLNRGPPPDRITLAGVLLACSYGGFIEEGMTIFSSMQGSYGIIPSNEHYASIVN 385
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
LL ++G L EA ++++MP E ++ ++L AC G+++L E VA RL ++ +S P
Sbjct: 386 LLCQAGWLDEAMSMIEAMPSEPNSMTCRSILHACAIRGDLKLMEGVAERLVDIGSLSSLP 445
Query: 319 YVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
Y++L+ +Y QW V VK M+ + + GCSWI
Sbjct: 446 YLVLARMYEMRGQWEAVVRVKKTMERTKAKTVDGCSWI 483
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 134/317 (42%), Gaps = 41/317 (12%)
Query: 10 MPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVM------------- 52
MPER++ SWN+M+ G G +A +F +M V ++++M
Sbjct: 1 MPERDVVSWNSMISGFASYGYFDSALGIFGEMQNMGVRPSAFTYSIMVSIVFDALHGKEL 60
Query: 53 --------------------IDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGL 92
ID Y K G + A +F + D W+ LI G ++G
Sbjct: 61 HGSMIRSGFNTLNVVLGNSLIDMYGKFGCVDYAFGVFFTMEEVDVITWNSLIIGCCKSGY 120
Query: 93 PNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA 152
AL F M PDE+ +++++CS + NLD K + + + + T V +
Sbjct: 121 GELALHQFCLMRSSGYSPDEFTCSAVITSCSNLRNLDKGKQIFAFCLKVGF-LSNTIVSS 179
Query: 153 ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIP 212
A ID+ +KC ++ + +LFEE+ + + SMI + HG+ E A+ LF L E + P
Sbjct: 180 AAIDLFSKCNRLEDSVQLFEELDQLNSALCNSMISSYAGHGFGENALQLFVLALRENIRP 239
Query: 213 DNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYEL 272
+ +L+ S E F + K + +V + ++ G + A ++
Sbjct: 240 TEFTISSVLSFIS--IFPPEQGTQFHSSVVKLGFELDAIVASSLVQMYTKFGFIDYAMDI 297
Query: 273 LKSMPVESHASAWGALL 289
KSM V S W ++
Sbjct: 298 FKSMTVRDLIS-WNTMI 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 174 MPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS-------- 225
MP+RD+ S+ SMI G + +GY + A+G+F +M N G+ P ++++++
Sbjct: 1 MPERDVVSWNSMISGFASYGYFDSALGIFGEMQNMGVRPSAFTYSIMVSIVFDALHGKEL 60
Query: 226 HGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAW 285
HG ++ G F T+ ++D+ + G + A+ + +M E W
Sbjct: 61 HGSMIRSG---FNTLNVVLG--------NSLIDMYGKFGCVDYAFGVFFTME-EVDVITW 108
Query: 286 GAL-LGACKF-YGEVELGEIVANRLFELEPENSSPYVLLSS 324
+L +G CK YGE+ L + R P+ + +++S
Sbjct: 109 NSLIIGCCKSGYGELALHQFCLMRSSGYSPDEFTCSAVITS 149
>29597.m000283 pentatricopeptide repeat-containing protein, putative
Length = 434
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 143/241 (59%), Gaps = 1/241 (0%)
Query: 5 RVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIAS 64
++F +MPER+L SW ++ G K G + AR++FD MP R++VS+ MI+GY K GD
Sbjct: 194 KLFEEMPERDLFSWTVLIDGFSKCGKVDVARELFDKMPSRNLVSWNAMINGYMKAGDFVL 253
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
A LFDK P+++ W+ +++GY N EAL +F M + P+ +VS SA S
Sbjct: 254 ASELFDKMPEKNLISWNSMVAGYDLNERFKEALDLFLTMLERDFTPNHATLVSTFSAVSG 313
Query: 125 VGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCS 184
+ +L KW+ Y+ ++ + + +LI+M +KCGN++ A +F+ + K+ L + +
Sbjct: 314 LASLSTGKWMHSYMVKNGFQLDGV-LATSLINMYSKCGNIESALSVFQLITKKKLGHWTA 372
Query: 185 MIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKY 244
+I GL +HG A+ A+ F++M G+ P F +L ACSH LVE+G+ YF+ M +
Sbjct: 373 IIVGLGMHGMADNALEFFHEMCRTGMRPHAITFIGVLNACSHAGLVEDGRKYFDMMAIRM 432
Query: 245 S 245
S
Sbjct: 433 S 433
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 141/298 (47%), Gaps = 22/298 (7%)
Query: 58 KVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVS 117
K+ ++ ++F+K + L+++LI Y QN L ++A+ +F + L PD + +
Sbjct: 54 KINNLEYVLSIFNKIQEPALVLYNILIKCYIQNQLSHDAITLFSQL-LHEFNPDGFTLPC 112
Query: 118 LMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR 177
++ C+++ K + + + + + V ++L++M +KC ++D A K+F M +
Sbjct: 113 VIKGCARLHATKEGKQIHGLVLKLGFGLNK-FVSSSLVNMYSKCKDIDSAKKVFLSMDDK 171
Query: 178 DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYF 237
DL S+ S+I G G E + LF +M L ++TV++ S V+ + F
Sbjct: 172 DLVSWNSLIDGYVKCGQVELGMKLFEEMPERDLF----SWTVLIDGFSKCGKVDVARELF 227
Query: 238 ETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGAC----K 293
+ M S+ ++V + M++ ++G A EL MP E + +W +++ +
Sbjct: 228 DKMPSR-NLVS----WNAMINGYMKAGDFVLASELFDKMP-EKNLISWNSMVAGYDLNER 281
Query: 294 FYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAAD----QWLDVSHVKNKMKERGL 347
F ++L + R + P +++ S++ A +W+ VKN + G+
Sbjct: 282 FKEALDLFLTMLER--DFTPNHATLVSTFSAVSGLASLSTGKWMHSYMVKNGFQLDGV 337
>29751.m001893 pentatricopeptide repeat-containing protein, putative
Length = 606
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 158/282 (56%), Gaps = 2/282 (0%)
Query: 76 DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVD 135
D W+ +I+GY+ GL +ALK F M N+K D Y SL+ A ++ + +
Sbjct: 326 DQISWNAVIAGYSNLGLGEDALKCFCEMRHANIKMDFYTFTSLLGAIGAFLAIEEGREMH 385
Query: 136 CYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYA 195
+ ++ +V L+ M A+CG +D + ++F M D+ S+ +++ G + HG+
Sbjct: 386 ALIVKTGY-ASSVYVQNGLVSMYARCGAIDDSKRVFWLMEDHDVVSWNALLTGCAHHGFG 444
Query: 196 EQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVP-SPEHYA 254
+AV LF +M + P++ F +L+ACSH V++G YF+ M+S S+ P EHYA
Sbjct: 445 NEAVELFEQMRKTKIKPNSTTFLAVLSACSHVGSVDKGLEYFDFMRSDISLEPLRVEHYA 504
Query: 255 CMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPE 314
+VD+ R+G L EA ++ MP++ S + ALL AC +G E+ A +L EL P+
Sbjct: 505 SVVDIFGRAGYLSEAEAIINCMPMDPGPSVYKALLSACLVHGNREIAVRSARKLLELWPD 564
Query: 315 NSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+ + Y+LLS++ A W D + V+ M +RG+RK PG SWI
Sbjct: 565 DPATYILLSNMLATEGYWDDAADVRKLMCDRGVRKNPGYSWI 606
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 160/357 (44%), Gaps = 40/357 (11%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLV--------KGGDLINARKVFDDMPERDVVSF---- 49
+A VF +MPERN +WN+++ G + +G + + +V +F
Sbjct: 122 SAHEVFNEMPERNDVTWNSLIFGYLNVMPTCAMRGVTSFSVSTCLVVCSQLEVRNFGAQV 181
Query: 50 ----------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLP 93
T +ID Y+K + + +FD ++ W+ +++ YAQN P
Sbjct: 182 HGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVDKNVVTWTAMVTAYAQNEQP 241
Query: 94 NEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAA 153
+EA+ + + M + +K + SL+S+ S + K V C + + ++ ++ A
Sbjct: 242 DEAMILVREMMRLGIKANYVTYNSLLSSFSGPKYMQYCKQVHCSIIRCGLEC-NLYIAAT 300
Query: 154 LIDMNAKC-GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIP 212
L+ + +KC N++ NK+ + D S+ ++I G S G E A+ F +M + +
Sbjct: 301 LVTVYSKCTNNLEDFNKISSGVQLSDQISWNAVIAGYSNLGLGEDALKCFCEMRHANIKM 360
Query: 213 DNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYEL 272
D FT +L A +EEG+ + K S +V + +R G + ++ +
Sbjct: 361 DFYTFTSLLGAIGAFLAIEEGRE-MHALIVKTGYASSVYVQNGLVSMYARCGAIDDSKRV 419
Query: 273 LKSMPVESH-ASAWGALLGACKFYG----EVELGEIVANRLFELEPENSSPYVLLSS 324
M E H +W ALL C +G VEL E + R +++P +++ +LS+
Sbjct: 420 FWLM--EDHDVVSWNALLTGCAHHGFGNEAVELFEQM--RKTKIKPNSTTFLAVLSA 472
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 91/173 (52%), Gaps = 4/173 (2%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
++ YA+ G I ++ +F D W+ L++G A +G NEA+++F+ M +KP+
Sbjct: 403 LVSMYARCGAIDDSKRVFWLMEDHDVVSWNALLTGCAHHGFGNEAVELFEQMRKTKIKPN 462
Query: 112 EYIMVSLMSACSQVGNLDLA-KWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
++++SACS VG++D ++ D S S++ + A+++D+ + G + A +
Sbjct: 463 STTFLAVLSACSHVGSVDKGLEYFDFMRSDISLEPLRVEHYASVVDIFGRAGYLSEAEAI 522
Query: 171 FEEMPKRDLFS-YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
MP S Y +++ +HG E AV K+L L PD+ A ++L+
Sbjct: 523 INCMPMDPGPSVYKALLSACLVHGNREIAVRSARKLLE--LWPDDPATYILLS 573
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 122/266 (45%), Gaps = 16/266 (6%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
+ ++D YAK +I SA +F++ P+R+ W+ LI GY N +P A++ G+ +V
Sbjct: 108 SAVVDMYAKCSEIQSAHEVFNEMPERNDVTWNSLIFGYL-NVMPTCAMR---GVTSFSVS 163
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
+ + CSQ+ + V + D V ALIDM +KC +D + +
Sbjct: 164 -------TCLVVCSQLEVRNFGAQVHGLSLKLGFD-NNVFVGTALIDMYSKCDGVDDSWR 215
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
+F+ M +++ ++ +M+ + + ++A+ L +M+ G+ + + +L++ S +
Sbjct: 216 VFDYMVDKNVVTWTAMVTAYAQNEQPDEAMILVREMMRLGIKANYVTYNSLLSSFSGPKY 275
Query: 230 VEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
++ K ++ + + + A +V + S+ E + + S S +W A++
Sbjct: 276 MQYCKQVHCSII-RCGLECNLYIAATLVTVYSKCTNNLEDFNKISSGVQLSDQISWNAVI 334
Query: 290 GACKFYGEVELGEIVANRLFELEPEN 315
Y + LGE E+ N
Sbjct: 335 AG---YSNLGLGEDALKCFCEMRHAN 357
>30063.m001410 pentatricopeptide repeat-containing protein, putative
Length = 524
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 135/209 (64%), Gaps = 3/209 (1%)
Query: 27 KGGDLINARKVFDDMP-ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
K G+L AR +F+++ R+ ++ MI Y +VGD+ SAR LFDK P+RDA W+ +IS
Sbjct: 234 KCGNLEAARGIFNELGVSRNSSTWNAMISAYTRVGDLLSARDLFDKMPERDAVSWNTMIS 293
Query: 86 GYAQNGLPNEALKIFQGM-ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
GYAQNG A+++F+ M + + +PDE MVS++SAC +G L+L W+ ++S+ I+
Sbjct: 294 GYAQNGQSAMAIELFKEMIDAKDSQPDEVTMVSIISACGHLGALELGTWIVNFISEYRIE 353
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
+ + ALI M +KCGNM A ++F+EM RD+ SY S+I G + HG +A+ L
Sbjct: 354 LTISGY-NALIFMYSKCGNMKEAQRIFQEMETRDVVSYNSLIGGFAAHGEGNEAIKLLLS 412
Query: 205 MLNEGLIPDNAAFTVILTACSHGRLVEEG 233
M EG+ PD+ + +LTACSH LVEEG
Sbjct: 413 MKEEGVDPDHVTYIGVLTACSHAGLVEEG 441
Score = 173 bits (439), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 179/351 (50%), Gaps = 39/351 (11%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
+NA+++F +M ER+L WN+M+ G K G+ A +F PER+V+++T M+ G++K+
Sbjct: 76 ENARKLFDEMTERSLADWNSMICGYWKCGNETEACSLFSMTPERNVITWTAMVTGFSKIK 135
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
++ SAR FD P ++ W+ +ISGYAQNG EALK+F M + V+P+E +++S
Sbjct: 136 ELDSARKYFDDMPVKNIVSWNAIISGYAQNGFVEEALKLFNHMIRLGVQPNETTWATVIS 195
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMD--------------- 165
+CS G+ A+ L + I + V AL+DMNAKCGN++
Sbjct: 196 SCSSCGDPCRAESFVKLLDKRKIKM-NYFVKTALLDMNAKCGNLEAARGIFNELGVSRNS 254
Query: 166 -----------------RANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLN- 207
A LF++MP+RD S+ +MI G + +G + A+ LF +M++
Sbjct: 255 STWNAMISAYTRVGDLLSARDLFDKMPERDAVSWNTMISGYAQNGQSAMAIELFKEMIDA 314
Query: 208 EGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLK 267
+ PD I++AC H +E G + S+Y + + Y ++ + S+ G +K
Sbjct: 315 KDSQPDEVTMVSIISACGHLGALELGT-WIVNFISEYRIELTISGYNALIFMYSKCGNMK 373
Query: 268 EAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
EA + + M S + +L+G +GE G L ++ E P
Sbjct: 374 EAQRIFQEMETRDVVS-YNSLIGGFAAHGE---GNEAIKLLLSMKEEGVDP 420
>28193.m000297 pentatricopeptide repeat-containing protein, putative
Length = 518
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 144/241 (59%), Gaps = 1/241 (0%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A ++F+QMP +N+ +WNAM+ G + GDL +A K+F MP ++VV+ T MI GY K+G I
Sbjct: 200 AHKLFLQMPYKNVVTWNAMISGYIACGDLTSAWKLFKTMPVKNVVACTAMITGYMKLGFI 259
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
A LF + + W+ +ISG+ +N + +K+F+ M ++P+ + SL+ C
Sbjct: 260 KLAEKLFKEMSTDNVVTWNAMISGFIENSRAEDGVKLFRTMVGFGIRPNPSTLSSLLLGC 319
Query: 123 SQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSY 182
S++ L L + V + +S + T +L+ M KCG+++ A KLF E+P++D+ ++
Sbjct: 320 SELSALQLGRQVHQLVCKSPLASDMT-AGTSLVSMYCKCGDLEDAWKLFLELPRKDVVTW 378
Query: 183 CSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKS 242
+MI G ++HG E+A+ LF++M EG+ PD F +L AC+H + G YF +M
Sbjct: 379 NAMISGYALHGAGEKALRLFDEMKKEGITPDWITFVAVLLACNHAGFADLGLKYFHSMAP 438
Query: 243 K 243
+
Sbjct: 439 R 439
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 154/320 (48%), Gaps = 17/320 (5%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLV-KGGDLINARKVFDDMPERDVVSFTVMIDGYAKV 59
D+A +F M + +WN+++ G K G + NAR++FD +PE D +S+ M+ Y
Sbjct: 104 DSALELFNNMTIKTTVTWNSILAGYSRKRGKMKNARELFDKIPEPDTISYNTMLACYVHN 163
Query: 60 GDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLM 119
D+ A+A FD P +D W+ LISG++QNG +A K+F M NV M+S
Sbjct: 164 SDMEKAQAFFDLIPNKDPASWNTLISGFSQNGKMAKAHKLFLQMPYKNVV-TWNAMISGY 222
Query: 120 SACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDL 179
AC G+L A + ++ + A+I K G + A KLF+EM ++
Sbjct: 223 IAC---GDLTSA-----WKLFKTMPVKNVVACTAMITGYMKLGFIKLAEKLFKEMSTDNV 274
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFET 239
++ +MI G + AE V LF M+ G+ P+ + + +L CS ++ G+ +
Sbjct: 275 VTWNAMISGFIENSRAEDGVKLFRTMVGFGIRPNPSTLSSLLLGCSELSALQLGRQVHQ- 333
Query: 240 MKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
+ K + +V + + G L++A++L +P W A++ +G E
Sbjct: 334 LVCKSPLASDMTAGTSLVSMYCKCGDLEDAWKLFLELP-RKDVVTWNAMISGYALHGAGE 392
Query: 300 LGEIVANRLF-ELEPENSSP 318
A RLF E++ E +P
Sbjct: 393 ----KALRLFDEMKKEGITP 408
>29676.m001697 pentatricopeptide repeat-containing protein, putative
Length = 472
Score = 177 bits (450), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 139/231 (60%), Gaps = 1/231 (0%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP 73
+L + NA++ K G L+ A +VF MP ++VVS+T MI YAK G + AR FD+ P
Sbjct: 223 DLVARNALIDMYAKCGALVLAERVFQQMPNKNVVSWTSMITAYAKQGLVEYARKSFDQMP 282
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKW 133
+++ W+ +IS Y Q G EAL +F M V P+E ++S++SAC Q+G+L + K
Sbjct: 283 EKNVVSWNSMISSYVQGGQCREALDLFHEMHSFRVVPNEATLLSVLSACGQIGDLVMGKK 342
Query: 134 VDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHG 193
+ Y+ +S + + +LIDM AKCG + A +F EMP ++L S+ +I L++HG
Sbjct: 343 IHNYICGTS-SMYSVTLCNSLIDMYAKCGALRIAIDVFNEMPNKNLVSWNVIIGALALHG 401
Query: 194 YAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKY 244
Y +AV LF KM G+ PD F +L+ACSH LV+ G +YF+ M S Y
Sbjct: 402 YGVEAVELFRKMQAAGVWPDEITFMGLLSACSHSGLVDSGLYYFDKMSSIY 452
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 137/281 (48%), Gaps = 44/281 (15%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I+ Y G I AR +FD +R W+ +I GY++ G E +F+ M + + D
Sbjct: 129 LINAYIACGFIRYARKMFDDMSERSLVSWNSMIGGYSKLGWCKEVFLLFKEMREIGTEAD 188
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA--ALIDMNAKCGNMDRANK 169
++ +V+L+ CS+ +++L ++V Y+ + + I +VA ALIDM AKCG + A +
Sbjct: 189 DFTLVNLLLVCSRRCDINLGRFVHLYIQITGMKI---DLVARNALIDMYAKCGALVLAER 245
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAE-------------------------------QA 198
+F++MP +++ S+ SMI + G E +A
Sbjct: 246 VFQQMPNKNVVSWTSMITAYAKQGLVEYARKSFDQMPEKNVVSWNSMISSYVQGGQCREA 305
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSH-GRLVEEGK--HYFETMKSKYSMVPSPEHYAC 255
+ LF++M + ++P+ A +L+AC G LV K +Y S YS+
Sbjct: 306 LDLFHEMHSFRVVPNEATLLSVLSACGQIGDLVMGKKIHNYICGTSSMYSVTLCNS---- 361
Query: 256 MVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYG 296
++D+ ++ G L+ A ++ MP ++ S W ++GA +G
Sbjct: 362 LIDMYAKCGALRIAIDVFNEMPNKNLVS-WNVIIGALALHG 401
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 136/294 (46%), Gaps = 28/294 (9%)
Query: 32 INARKVFDDMPERDV-----VSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
I+A+ + +++ ++ + VSF + D G++ A +F++ + F+++ LI G
Sbjct: 7 IHAQIILNNLTDQTLTLGKLVSFCAVSDA----GNLDYAHLVFNQISIPNKFMYNSLIRG 62
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG 146
Y + P +++ +++ + + P+E+ ++ AC+ A W+ + + +G
Sbjct: 63 YCNSNSPIKSMFLYRQLIDSGLSPNEFTFPFVLKACASKS----AHWMSMIVHGHAQKLG 118
Query: 147 QTHVVA---ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
++ LI+ CG + A K+F++M +R L S+ SMI G S G+ ++ LF
Sbjct: 119 FASLICVQNGLINAYIACGFIRYARKMFDDMSERSLVSWNSMIGGYSKLGWCKEVFLLFK 178
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKH---YFETMKSKYSMVPSPEHYACMVDLL 260
+M G D+ +L CS + G+ Y + K +V ++D+
Sbjct: 179 EMREIGTEADDFTLVNLLLVCSRRCDINLGRFVHLYIQITGMKIDLVARNA----LIDMY 234
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPE 314
++ G L A + + MP + +W +++ A G VE A + F+ PE
Sbjct: 235 AKCGALVLAERVFQQMP-NKNVVSWTSMITAYAKQGLVEY----ARKSFDQMPE 283
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 39/166 (23%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV--------------- 47
A++ F QMPE+N+ SWN+M+ V+GG A +F +M VV
Sbjct: 274 ARKSFDQMPEKNVVSWNSMISSYVQGGQCREALDLFHEMHSFRVVPNEATLLSVLSACGQ 333
Query: 48 ---------------------SFTV---MIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
S T+ +ID YAK G + A +F++ P ++ W+V+
Sbjct: 334 IGDLVMGKKIHNYICGTSSMYSVTLCNSLIDMYAKCGALRIAIDVFNEMPNKNLVSWNVI 393
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLD 129
I A +G EA+++F+ M+ V PDE + L+SACS G +D
Sbjct: 394 IGALALHGYGVEAVELFRKMQAAGVWPDEITFMGLLSACSHSGLVD 439
>29811.m000535 pentatricopeptide repeat-containing protein, putative
Length = 520
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 167/324 (51%), Gaps = 43/324 (13%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP------------------ 42
D AK +F QMP++ L +WN+++ G D ++F M
Sbjct: 183 DLAKDIFEQMPKKTLVAWNSLIAGYSSAADSKECIELFWRMNMEGTKPTVTTLSSILLAC 242
Query: 43 ---------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ D+ + +I+ Y K G + SA +F PK + LW+
Sbjct: 243 SRAAHLQHGRFIHGYAVRNRVQLDIFVSSGLIELYFKCGKVQSAENIFYMLPKANVVLWN 302
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
V+ISGY G +AL ++ M++ +VKPD S++SACSQ+ L+ K + ++++
Sbjct: 303 VMISGYVTIGDYVKALDMYDEMKIASVKPDAVTFSSILSACSQLAALEKGKEIHNCITKN 362
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
++ + V+ AL+DM AKCG +D A +F ++P+RDL S+ S+I HG A +A+ L
Sbjct: 363 DLETNEI-VMGALLDMYAKCGAVDEALSVFNKLPERDLLSWTSIISAYGSHGQALEALRL 421
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F ++ PD F +L+ACSH LV++G +YF M + Y + P EHY+C++DLL
Sbjct: 422 FEELQQSKASPDAVTFLAVLSACSHAGLVDKGYYYFNQMITNYGIKPGLEHYSCLIDLL- 480
Query: 262 RSGQLKEAYELLKSMPVESHASAW 285
G+++E + L +P + A +
Sbjct: 481 --GRIQEQSQELNEIPCPNRAEKY 502
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 150/293 (51%), Gaps = 17/293 (5%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D+V + ++ +AK A LFD+ P+RD W+ +IS Y Q+G +AL++F M
Sbjct: 64 DIVVASSLVSLHAKCNLFGYAIQLFDEMPERDVACWNTVISCYYQDGKAEKALEMFGKMR 123
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
+P+ + +++S+C+++ +L+ K + + Q+ + + V +AL+DM K G +
Sbjct: 124 DSGFEPNSVTLTTVISSCARLLDLERGKEIHREVMQNGM-VLDGFVGSALVDMYGKFGCL 182
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
D A +FE+MPK+ L ++ S+I G S +++ + LF +M EG P + IL AC
Sbjct: 183 DLAKDIFEQMPKKTLVAWNSLIAGYSSAADSKECIELFWRMNMEGTKPTVTTLSSILLAC 242
Query: 225 SHGRLVEEGKH---YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESH 281
S ++ G+ Y + + + S + +++L + G+++ A + +P +++
Sbjct: 243 SRAAHLQHGRFIHGYAVRNRVQLDIFVS----SGLIELYFKCGKVQSAENIFYMLP-KAN 297
Query: 282 ASAWGALLGACKFYGEVELGEIVA--NRLFELEPENSSP-YVLLSSIYAAADQ 331
W ++ G V +G+ V + E++ + P V SSI +A Q
Sbjct: 298 VVLWNVMIS-----GYVTIGDYVKALDMYDEMKIASVKPDAVTFSSILSACSQ 345
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 131/257 (50%), Gaps = 10/257 (3%)
Query: 84 ISGYAQNGLPNEALKIF-QGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
++ Y +N + EAL++F + ++ ++PD + S++ AC +G D + + +L +S
Sbjct: 1 MAAYTKNCMYTEALELFDRLLQYPYLQPDSFTYPSVLKACGGLGRYDYGRMIHTHLIKSG 60
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ V ++L+ ++AKC A +LF+EMP+RD+ + ++I G AE+A+ +F
Sbjct: 61 F-VFDIVVASSLVSLHAKCNLFGYAIQLFDEMPERDVACWNTVISCYYQDGKAEKALEMF 119
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH-YFETMKSKYSMVPSPEHYACMVDLLS 261
KM + G P++ T ++++C+ +E GK + E M++ MV + +VD+
Sbjct: 120 GKMRDSGFEPNSVTLTTVISSCARLLDLERGKEIHREVMQN--GMVLDGFVGSALVDMYG 177
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYV- 320
+ G L A ++ + MP ++ AW +L+ Y + + + E + P V
Sbjct: 178 KFGCLDLAKDIFEQMPKKTLV-AWNSLIAG---YSSAADSKECIELFWRMNMEGTKPTVT 233
Query: 321 LLSSIYAAADQWLDVSH 337
LSSI A + + H
Sbjct: 234 TLSSILLACSRAAHLQH 250
>27446.m000498 pentatricopeptide repeat-containing protein, putative
Length = 801
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 188/382 (49%), Gaps = 49/382 (12%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
+ A+ F MPERN+ SWNAM+ G V+ GDL NARK F +MPER+V S+ +I GY K G
Sbjct: 107 EEAETFFRSMPERNVVSWNAMLAGFVQNGDLRNARKCFYEMPERNVSSWNSIITGYCKSG 166
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
+ AR LFD+ +R + W V+ SGY + E +F M V+PD+ + V +S
Sbjct: 167 LMKEARELFDRMEERSSVSWMVMASGYVEISQYREGWCVFLMMMNSGVRPDQAVFVVGLS 226
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
A +L + + + + V A+++ A+CG++D A K FE MP R+ +
Sbjct: 227 AIMGFNDLGMIGSFRTLVMKMGYE-EDVVVATAILNAYARCGSLDDAFKFFESMPARNEY 285
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
S SMI S G + A+ L+ K +G +A T I+ A H ++E KH F+ +
Sbjct: 286 SLTSMIAAFSQRGRLDDAIALYEKDSKQG----DATRTTIIAAYMHNGRIDEAKHIFDEI 341
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLG---------- 290
+ P+ + M+ +++G L+EA + MPV +A +W A++G
Sbjct: 342 VN-----PNVVAWNAMLGGYAQNGMLEEAKAIFLQMPVR-NAVSWAAMIGGFVQNGNGKE 395
Query: 291 -------------------------ACKFYGEVELGEIVANRLFELEPENSSPYVL--LS 323
AC G+VE+G+ + + ++ + S+P+V L
Sbjct: 396 GLKLFTELHRTGMIPTHSCFTSALFACANIGDVEIGKQIHSLSIKMRCQ-SNPFVGNGLI 454
Query: 324 SIYAAADQWLDVSHVKNKMKER 345
S+YA + DVSHV N M R
Sbjct: 455 SMYAKCNSVEDVSHVFNSMNVR 476
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 2/209 (0%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N ++ K + + VF+ M RD VS+ ++ G + + A+ FD P RDA
Sbjct: 451 NGLISMYAKCNSVEDVSHVFNSMNVRDTVSWNSLVSGLSWNYLLNDAQNTFDNMPTRDAV 510
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ +IS + A ++F M +KP++ + SL+SAC +G L + +
Sbjct: 511 SWAAIISAHVHADQGEIAWQLFLDMLSAGLKPNDLTITSLLSACGNLGVTKLGEQFHALV 570
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+ + HV ALI M KCGN+D +FEEM RD+ ++ +++ G + +G ++A
Sbjct: 571 LKHGFN-SCLHVCNALISMYFKCGNVD-GLYVFEEMIDRDIVTWNTVLAGCAQNGLCKEA 628
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHG 227
+F +M + PD +F +L+ACSH
Sbjct: 629 TKVFEQMAEAEVFPDEISFLGVLSACSHA 657
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 157/374 (41%), Gaps = 66/374 (17%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINA-------------------------- 34
D+A + F MP RN S +M+ + G L +A
Sbjct: 270 DDAFKFFESMPARNEYSLTSMIAAFSQRGRLDDAIALYEKDSKQGDATRTTIIAAYMHNG 329
Query: 35 -----RKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQ 89
+ +FD++ +VV++ M+ GYA+ G + A+A+F + P R+A W+ +I G+ Q
Sbjct: 330 RIDEAKHIFDEIVNPNVVAWNAMLGGYAQNGMLEEAKAIFLQMPVRNAVSWAAMIGGFVQ 389
Query: 90 NGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTH 149
NG E LK+F + + P S + AC+ +G++++ K + LS
Sbjct: 390 NGNGKEGLKLFTELHRTGMIPTHSCFTSALFACANIGDVEIGKQIHS-LSIKMRCQSNPF 448
Query: 150 VVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGL-------------------- 189
V LI M AKC +++ + +F M RD S+ S++ GL
Sbjct: 449 VGNGLISMYAKCNSVEDVSHVFNSMNVRDTVSWNSLVSGLSWNYLLNDAQNTFDNMPTRD 508
Query: 190 --------SIHGYAEQ---AVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE 238
S H +A+Q A LF ML+ GL P++ T +L+AC + + + G+ F
Sbjct: 509 AVSWAAIISAHVHADQGEIAWQLFLDMLSAGLKPNDLTITSLLSACGNLGVTKLGEQ-FH 567
Query: 239 TMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEV 298
+ K+ ++ + + G + Y + + M ++ W +L C G
Sbjct: 568 ALVLKHGFNSCLHVCNALISMYFKCGNVDGLY-VFEEM-IDRDIVTWNTVLAGCAQNGLC 625
Query: 299 ELGEIVANRLFELE 312
+ V ++ E E
Sbjct: 626 KEATKVFEQMAEAE 639
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 14/275 (5%)
Query: 11 PERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFD 70
P+ +L N + L K G + +AR +FD MP+RD VS+ MI Y + I A++LFD
Sbjct: 24 PQAHLFQCNKKIQELGKLGRVKDARHLFDTMPQRDAVSWNSMISVYLQNNKIPDAKSLFD 83
Query: 71 KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDL 130
++ W++L+SGYA+ GL EA F+ M NV ++ V N DL
Sbjct: 84 AFEYKNVRTWTILLSGYAKAGLIEEAETFFRSMPERNVVSWNAMLAGF------VQNGDL 137
Query: 131 AKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQG-L 189
C+ ++ + ++I K G M A +LF+ M +R S+ M G +
Sbjct: 138 RNARKCFYEMPERNVSSWN---SIITGYCKSGLMKEARELFDRMEERSSVSWMVMASGYV 194
Query: 190 SIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC-SHGRLVEEGKHYFETMKSKYSMVP 248
I Y E +F M+N G+ PD A F V L+A L G F T+ K
Sbjct: 195 EISQYRE-GWCVFLMMMNSGVRPDQAVFVVGLSAIMGFNDLGMIGS--FRTLVMKMGYEE 251
Query: 249 SPEHYACMVDLLSRSGQLKEAYELLKSMPVESHAS 283
+++ +R G L +A++ +SMP + S
Sbjct: 252 DVVVATAILNAYARCGSLDDAFKFFESMPARNEYS 286
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 39/174 (22%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMID-- 54
++A+ F MP R+ SW A++ V A ++F DM + ++ T ++
Sbjct: 495 NDAQNTFDNMPTRDAVSWAAIISAHVHADQGEIAWQLFLDMLSAGLKPNDLTITSLLSAC 554
Query: 55 ---GYAKVGDIASARAL-----------------------------FDKAPKRDAFLWSV 82
G K+G+ A L F++ RD W+
Sbjct: 555 GNLGVTKLGEQFHALVLKHGFNSCLHVCNALISMYFKCGNVDGLYVFEEMIDRDIVTWNT 614
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDC 136
+++G AQNGL EA K+F+ M V PDE + ++SACS G + + W C
Sbjct: 615 VLAGCAQNGLCKEATKVFEQMAEAEVFPDEISFLGVLSACSHAGGI-VRAWFIC 667
>30170.m014235 pentatricopeptide repeat-containing protein, putative
Length = 742
Score = 174 bits (441), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 176/344 (51%), Gaps = 40/344 (11%)
Query: 15 LTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPK 74
+T NA++ K GD A VF MP R+++S+T MI +++ G A+A F+K P+
Sbjct: 392 VTVGNALITMYSKCGDTQKADCVFKMMPVRNIISWTSMITAFSQAGYFRKAQACFNKMPE 451
Query: 75 RDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV 134
R+ W+ +IS Y Q+G LK++ M+ + PD+ + +SAC+ + L L +
Sbjct: 452 RNVITWNSMISMYIQHGFQEWGLKLYVRMQRERIAPDDITFATSISACADLAMLKLGNQI 511
Query: 135 DCYLSQS-SIDIGQTHVVA-ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIH 192
++Q+ + G VA +L+ M ++CG ++ A K F+ + ++L S+ SMI G + +
Sbjct: 512 ---VAQAEKLGFGSDVSVANSLVTMYSRCGQIEEARKAFDLVSMKNLVSWNSMIAGYAQN 568
Query: 193 GYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEH 252
G+ A+ +F ML IPD+ ++ +L+
Sbjct: 569 GHGRVAIEVFKNMLEMEYIPDHISYLSVLS------------------------------ 598
Query: 253 YACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELE 312
DLL R+G L++A L+ MP + WGALLGACK + +L E EL+
Sbjct: 599 -----DLLGRAGLLEQAKNLIDDMPFTPNGDVWGALLGACKIHCNSKLAEYAVKNSQELD 653
Query: 313 PENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+NS Y LL+ IY++ V+ ++ +KE+G++K PG SWI
Sbjct: 654 VDNSGSYALLAHIYSSRGNLEGVADLRKLIKEKGIQKSPGYSWI 697
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 138/292 (47%), Gaps = 3/292 (1%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
+++G +K G A +VF + + + F M+ Y+ + A LF++ P+RD+
Sbjct: 163 TSVMGMYIKCGAFTYADRVFLGIRQPSLFCFNSMLYCYSNSYGVGKALDLFNRIPERDSV 222
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
WS +IS +++G L +F M +P+ ++SAC+ + +L+ + +
Sbjct: 223 SWSTIISILSRHGFGVPTLSMFIEMWTQGFRPNSMTFACVLSACTSIHDLEWGAHLHARI 282
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+ I I +V L+ M AKCG++ A ++F + + + S+ S+I G++ G E+A
Sbjct: 283 IRKEI-ILDDYVGNGLVYMYAKCGHLKFARRVFNSLTEHNAVSWTSLINGVARCGLKEEA 341
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+ LFNKM + D F +L CSH G+ + +K M ++
Sbjct: 342 LLLFNKMREVLVALDEFTFATVLKVCSHPNFNFTGRQ-LHALTTKTGMGSIVTVGNALIT 400
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE 310
+ S+ G ++A + K MPV + S W +++ A G + N++ E
Sbjct: 401 MYSKCGDTQKADCVFKMMPVRNIIS-WTSMITAFSQAGYFRKAQACFNKMPE 451
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 146/315 (46%), Gaps = 12/315 (3%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGD 61
+A RVF M RN+ S+N M+ GL K + A+KVFD+MPERD VS+ M+ GY + G
Sbjct: 44 DACRVFADMTFRNVFSYNTMITGLSKAEQIDKAKKVFDEMPERDSVSWNSMMSGYFRNGK 103
Query: 62 IASARALFDKAPKRDAFLWSVLISGYAQN-----GLPNEALKIFQGMELMNVKPDEYIMV 116
+F + + ++L A G A+++ E + D+ I
Sbjct: 104 YEEVVKVFVLMIRNFTCIVNLLSFSCAMKACGALGCFKLAIQLHGLFEKFDFGSDKSIET 163
Query: 117 SLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK 176
S+M + G A V + Q S+ +++ + + +A LF +P+
Sbjct: 164 SVMGMYIKCGAFTYADRVFLGIRQPSL-----FCFNSMLYCYSNSYGVGKALDLFNRIPE 218
Query: 177 RDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHY 236
RD S+ ++I LS HG+ + +F +M +G P++ F +L+AC+ +E G H
Sbjct: 219 RDSVSWSTIISILSRHGFGVPTLSMFIEMWTQGFRPNSMTFACVLSACTSIHDLEWGAHL 278
Query: 237 FETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYG 296
+ K ++ +V + ++ G LK A + S+ E +A +W +L+ G
Sbjct: 279 HARIIRK-EIILDDYVGNGLVYMYAKCGHLKFARRVFNSL-TEHNAVSWTSLINGVARCG 336
Query: 297 EVELGEIVANRLFEL 311
E ++ N++ E+
Sbjct: 337 LKEEALLLFNKMREV 351
>30169.m006579 pentatricopeptide repeat-containing protein, putative
Length = 777
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 163/302 (53%), Gaps = 1/302 (0%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
DVV ++D YA G + A + +RD+ ++ L + Q G AL + M
Sbjct: 457 DVVVGNALVDAYAGSGRVDDAWRVVKDMNQRDSITYTSLATRLNQMGYHELALSVISHMF 516
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
+VK D + + SA + +G ++ K + CY +S + + V LID+ K G +
Sbjct: 517 NADVKIDGFSLTCFFSASASLGRIETGKQLHCYSLKSGLSCCLS-VANGLIDLYGKYGLV 575
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
A + F E+ + D+ S+ +I GL+ +G+ A+ F+ M G+ PD+ F ++L+ C
Sbjct: 576 HEARRAFTEITEPDVVSWNGLISGLASNGHISSALSAFDDMRLRGIQPDSITFLLVLSTC 635
Query: 225 SHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASA 284
SHG LV+ G YF +M+ + + P +HY C+VD+L R+G+L+EA ++++MP+E AS
Sbjct: 636 SHGGLVDMGLQYFHSMREMHDVEPQSDHYVCLVDILGRAGRLEEAMNIIETMPLEPDASI 695
Query: 285 WGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKE 344
+ LL AC + + LGE VA R EL P + + ++LL +Y ++ + +K+
Sbjct: 696 YKTLLAACSIHRNMNLGEDVARRGLELNPLDPAFHLLLVKLYDDCGRYDLGEKTRRSIKQ 755
Query: 345 RG 346
+G
Sbjct: 756 KG 757
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 144/320 (45%), Gaps = 51/320 (15%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSF----------- 49
++A ++F M + SW ++ V+ G +A +++ +M E V S
Sbjct: 172 EDACKLFSYMDSGDTVSWTTVIASCVQAGKCSHALRIYMEMLEAQVSSNEFTFVRLLAAS 231
Query: 50 ---------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
T +++ Y++ I A + P+ D LW+
Sbjct: 232 SFIGLQYGKLIHAHAIVLGVKLNLVLKTALVNMYSRCQRIEDAIKVSKLTPEYDVILWTA 291
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+ISG AQN EA+ F ME+ V + +S++S C + +LDL + + + ++
Sbjct: 292 IISGLAQNMKFQEAVAAFHKMEISGVSASNFTYLSMLSVCISILSLDLGRQIHSRVIRTG 351
Query: 143 IDIGQTHVVAALIDMNAKCGNM-DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
++ V AL+DM KC + + ++F + ++ S+ S+I G + HG+ + ++ L
Sbjct: 352 LE-DDVPVGNALVDMYMKCSCIVEHGLRMFRGIKSPNVISWTSLIAGFAEHGFQQDSLNL 410
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHY-----ACM 256
F +M G+ P++ +++L CS K ++T+K ++ + Y +
Sbjct: 411 FMEMRTVGVQPNSFTLSIVLRVCS------AIKSPYQTLKLHGHIIKTKADYDVVVGNAL 464
Query: 257 VDLLSRSGQLKEAYELLKSM 276
VD + SG++ +A+ ++K M
Sbjct: 465 VDAYAGSGRVDDAWRVVKDM 484
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 113/263 (42%), Gaps = 41/263 (15%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM----PERDVVSFTV----- 51
++A++ F +MP R++ SW ++ +K A +FD M P + +F+
Sbjct: 71 EHARQFFDEMPCRDVVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSC 130
Query: 52 ------------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ID Y++ A LF D W+
Sbjct: 131 FALGDFSYGKRIHASSIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVSWT 190
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I+ Q G + AL+I+ M V +E+ V L++A S +G L K + +
Sbjct: 191 TVIASCVQAGKCSHALRIYMEMLEAQVSSNEFTFVRLLAASSFIG-LQYGKLIHAHAIVL 249
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ + + AL++M ++C ++ A K+ + P+ D+ + ++I GL+ + ++AV
Sbjct: 250 GVKLNLV-LKTALVNMYSRCQRIEDAIKVSKLTPEYDVILWTAIISGLAQNMKFQEAVAA 308
Query: 202 FNKMLNEGLIPDNAAFTVILTAC 224
F+KM G+ N + +L+ C
Sbjct: 309 FHKMEISGVSASNFTYLSMLSVC 331
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 109/237 (45%), Gaps = 14/237 (5%)
Query: 58 KVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVS 117
K + AR FD+ P RD W+ ++S + +N EAL IF M L P+ + S
Sbjct: 66 KCFSVEHARQFFDEMPCRDVVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSS 125
Query: 118 LMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR 177
++ +C +G+ K + + + Q + ++LID+ ++ + + A KLF M
Sbjct: 126 ILRSCFALGDFSYGKRIHASSIKHGFESNQI-LGSSLIDLYSRFDSTEDACKLFSYMDSG 184
Query: 178 DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS-----HGRLVEE 232
D S+ ++I G A+ ++ +ML + + F +L A S +G+L+
Sbjct: 185 DTVSWTTVIASCVQAGKCSHALRIYMEMLEAQVSSNEFTFVRLLAASSFIGLQYGKLIHA 244
Query: 233 GKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
+ + K ++V +V++ SR ++++A ++ K P E W A++
Sbjct: 245 ---HAIVLGVKLNLVLK----TALVNMYSRCQRIEDAIKVSKLTP-EYDVILWTAII 293
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 16/143 (11%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAK 58
A+R F ++ E ++ SWN ++ GL G + +A FDDM R D ++F +++ +
Sbjct: 578 ARRAFTEITEPDVVSWNGLISGLASNGHISSALSAFDDMRLRGIQPDSITFLLVLSTCSH 637
Query: 59 VGDI-------ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
G + S R + D P+ D ++ V I G A G EA+ I +E M ++PD
Sbjct: 638 GGLVDMGLQYFHSMREMHDVEPQSDHYVCLVDILGRA--GRLEEAMNI---IETMPLEPD 692
Query: 112 EYIMVSLMSACSQVGNLDLAKWV 134
I +L++ACS N++L + V
Sbjct: 693 ASIYKTLLAACSIHRNMNLGEDV 715
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 34/180 (18%)
Query: 15 LTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPK 74
L+ N ++ K G + AR+ F ++ E DVVS+ +I G A G I+SA + FD
Sbjct: 559 LSVANGLIDLYGKYGLVHEARRAFTEITEPDVVSWNGLISGLASNGHISSALSAFDD--- 615
Query: 75 RDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA-KW 133
M L ++PD + ++S CS G +D+ ++
Sbjct: 616 ----------------------------MRLRGIQPDSITFLLVLSTCSHGGLVDMGLQY 647
Query: 134 VDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIH 192
++ H V L+D+ + G ++ A + E MP + D Y +++ SIH
Sbjct: 648 FHSMREMHDVEPQSDHYV-CLVDILGRAGRLEEAMNIIETMPLEPDASIYKTLLAACSIH 706
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 18/141 (12%)
Query: 160 KCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTV 219
KC +++ A + F+EMP RD+ S+ ++ + E+A+ +F+ M+ G P+ F+
Sbjct: 66 KCFSVEHARQFFDEMPCRDVVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSS 125
Query: 220 ILTAC------SHGRLVEEG--KHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYE 271
IL +C S+G+ + KH FE+ + S ++DL SR ++A +
Sbjct: 126 ILRSCFALGDFSYGKRIHASSIKHGFESNQILGS---------SLIDLYSRFDSTEDACK 176
Query: 272 LLKSMPVESHASAWGALLGAC 292
L M S W ++ +C
Sbjct: 177 LFSYMDSGDTVS-WTTVIASC 196
>29830.m001393 pentatricopeptide repeat-containing protein, putative
Length = 574
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 136/238 (57%), Gaps = 1/238 (0%)
Query: 11 PERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFD 70
P+ +L NA+V K G + A++VF++MP RD+VS+ ++ GY G + A+ F+
Sbjct: 328 PDFSLPVNNALVTLYWKCGKVDEAQEVFNNMPVRDLVSWNTILSGYLNAGRMDEAKTFFE 387
Query: 71 KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDL 130
+ P+++ W V+ISG AQNG E LK+F M+L +P +Y +++CS +G L+
Sbjct: 388 EMPEKNILSWVVMISGLAQNGFGEEGLKLFNQMKLRGFEPCDYAFAGAITSCSMLGLLEH 447
Query: 131 AKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLS 190
+ + L + D ALI M A+CG ++ A LF MP D S+ +MI L
Sbjct: 448 GRQLHAQLVRFGFD-SSLSAGNALITMYARCGVVEAARTLFLSMPCVDSVSWNAMIAALG 506
Query: 191 IHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVP 248
HGY QA+ LF +ML EG++PD F +L+ACSH LV+EG YF +M Y + P
Sbjct: 507 QHGYGVQAIELFEEMLIEGILPDRITFLTVLSACSHAGLVKEGHRYFNSMSRVYRITP 564
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 163/328 (49%), Gaps = 40/328 (12%)
Query: 34 ARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLP 93
AR++FD+MP RD +S+T +I GY K D+ +AR +FD ++ +W+ +ISGY GL
Sbjct: 215 ARRLFDEMPVRDELSWTTIITGYVKNDDLDAAREVFDGMREKLVVVWNAMISGYMHRGLY 274
Query: 94 NEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS----SIDIGQTH 149
EAL++F+ M L +K DE+ S++SAC+ G L K V Y+ ++ S D
Sbjct: 275 QEALEMFRKMYLAGLKLDEFTYTSIISACANAGFLQHGKQVHAYILKTEAMPSPDFSLP- 333
Query: 150 VVAALIDMNAKC-------------------------------GNMDRANKLFEEMPKRD 178
V AL+ + KC G MD A FEEMP+++
Sbjct: 334 VNNALVTLYWKCGKVDEAQEVFNNMPVRDLVSWNTILSGYLNAGRMDEAKTFFEEMPEKN 393
Query: 179 LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE 238
+ S+ MI GL+ +G+ E+ + LFN+M G P + AF +T+CS L+E G+
Sbjct: 394 ILSWVVMISGLAQNGFGEEGLKLFNQMKLRGFEPCDYAFAGAITSCSMLGLLEHGRQLHA 453
Query: 239 TMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE- 297
+ ++ S ++ + +R G ++ A L SMP S W A++ A +G
Sbjct: 454 QL-VRFGFDSSLSAGNALITMYARCGVVEAARTLFLSMPCVDSVS-WNAMIAALGQHGYG 511
Query: 298 VELGEIVANRLFE-LEPENSSPYVLLSS 324
V+ E+ L E + P+ + +LS+
Sbjct: 512 VQAIELFEEMLIEGILPDRITFLTVLSA 539
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 174/379 (45%), Gaps = 55/379 (14%)
Query: 17 SWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP--K 74
+ N ++ K L AR +FD++P+ D+V+ T +I+ Y+ G + A+ +F + P
Sbjct: 54 TLNRLIYIYCKSSKLSYARSLFDEIPQPDIVARTTLINAYSATGHLKLAKEMFYETPLIM 113
Query: 75 RDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVG-NLDLAKW 133
RDA +++ +I+ Y+ N + A+++F M+ + +PD + S++ A + V N +
Sbjct: 114 RDAVIYNAMITAYSHNNDGHAAIELFCDMKRNDFRPDNFTFTSVLGALALVAENERHCQQ 173
Query: 134 VDCYLSQSSIDIGQTHVVAALIDMNAKCGN---------MDRANKLFEEMPKRDLFSYCS 184
+ C + +S T V+ ALI + KC + M A +LF+EMP RD S+ +
Sbjct: 174 LHCTVVKSGTWF-VTSVLNALISVYVKCASSPSVISSSLMGAARRLFDEMPVRDELSWTT 232
Query: 185 MIQGLS--------------------------IHGYA-----EQAVGLFNKMLNEGLIPD 213
+I G I GY ++A+ +F KM GL D
Sbjct: 233 IITGYVKNDDLDAAREVFDGMREKLVVVWNAMISGYMHRGLYQEALEMFRKMYLAGLKLD 292
Query: 214 NAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYA----CMVDLLSRSGQLKEA 269
+T I++AC++ ++ GK + +M PSP+ +V L + G++ EA
Sbjct: 293 EFTYTSIISACANAGFLQHGKQVHAYILKTEAM-PSPDFSLPVNNALVTLYWKCGKVDEA 351
Query: 270 YELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPE-NSSPYVLLSSIYAA 328
E+ +MPV S W +L G ++ A FE PE N +V++ S A
Sbjct: 352 QEVFNNMPVRDLVS-WNTILSGYLNAGRMD----EAKTFFEEMPEKNILSWVVMISGLAQ 406
Query: 329 ADQWLDVSHVKNKMKERGL 347
+ + N+MK RG
Sbjct: 407 NGFGEEGLKLFNQMKLRGF 425
>29632.m000078 pentatricopeptide repeat-containing protein, putative
Length = 446
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 148/267 (55%), Gaps = 41/267 (15%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER---------------- 44
D+A++VF ++ ER++ SWN+M+ G K G A ++F +M E+
Sbjct: 179 DSARKVFDEILERDIVSWNSMISGYTKMGFAREAVRLFMEMREQGFEPVEMTLVSILGAC 238
Query: 45 ---------------------DVVSFTV--MIDGYAKVGDIASARALFDKAPKRDAFLWS 81
++ S+T +ID Y K GD+ SAR +FD ++D W+
Sbjct: 239 GDLGDLALGKWVEALIGDKKMELNSYTASALIDMYGKCGDLMSARRVFDNMAEKDIVTWN 298
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I+GYAQNG +EA+ +F M + P+E MV ++SAC+ +G LDL KWV+ Y SQ
Sbjct: 299 AMITGYAQNGASDEAMTLFNVMREAGITPNEITMVVVLSACASIGALDLGKWVEMYASQR 358
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ +V +AL+DM AKCG++D A ++FE MP ++ S+ +MI L+ HG A +A+ L
Sbjct: 359 GLQ-HDVYVASALVDMYAKCGSLDNALRVFENMPHKNEVSWNAMISALAFHGRAREALSL 417
Query: 202 FNKMLNEGLI-PDNAAFTVILTACSHG 227
F++MLN + P++ F + AC G
Sbjct: 418 FSRMLNGSTVRPNDITFIGVFAACRFG 444
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 142/246 (57%), Gaps = 3/246 (1%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I YAK + SAR +FD+ +RD W+ +ISGY + G EA+++F M +P
Sbjct: 168 LITMYAKCSKLDSARKVFDEILERDIVSWNSMISGYTKMGFAREAVRLFMEMREQGFEPV 227
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
E +VS++ AC +G+L L KWV+ + +++ ++ +ALIDM KCG++ A ++F
Sbjct: 228 EMTLVSILGACGDLGDLALGKWVEALIGDKKMEL-NSYTASALIDMYGKCGDLMSARRVF 286
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
+ M ++D+ ++ +MI G + +G +++A+ LFN M G+ P+ V+L+AC+ ++
Sbjct: 287 DNMAEKDIVTWNAMITGYAQNGASDEAMTLFNVMREAGITPNEITMVVVLSACASIGALD 346
Query: 232 EGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
GK + E S+ + + +VD+ ++ G L A + ++MP ++ S W A++ A
Sbjct: 347 LGK-WVEMYASQRGLQHDVYVASALVDMYAKCGSLDNALRVFENMPHKNEVS-WNAMISA 404
Query: 292 CKFYGE 297
F+G
Sbjct: 405 LAFHGR 410
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 137/292 (46%), Gaps = 9/292 (3%)
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLP-NEALKIFQGMELMNVKPDEYIMVSLM 119
D A A LF + P + + ++V+I G + A++++ M+ + +KP+ + L
Sbjct: 75 DFAYASLLFTQMPNPNDYAFNVMIRGLTTTWRNYSLAIQLYYQMKSLGLKPNNFTFPFLF 134
Query: 120 SACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDL 179
+C+ + L + + + + +H+ +LI M AKC +D A K+F+E+ +RD+
Sbjct: 135 ISCANLVALHCGQIAHSLVLKMGFN-NDSHINHSLITMYAKCSKLDSARKVFDEILERDI 193
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFET 239
S+ SMI G + G+A +AV LF +M +G P IL AC + GK + E
Sbjct: 194 VSWNSMISGYTKMGFAREAVRLFMEMREQGFEPVEMTLVSILGACGDLGDLALGK-WVEA 252
Query: 240 MKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
+ M + + ++D+ + G L A + +M E W A++ G +
Sbjct: 253 LIGDKKMELNSYTASALIDMYGKCGDLMSARRVFDNM-AEKDIVTWNAMITGYAQNGASD 311
Query: 300 LGEIVANRLFE--LEPENSSPYVLLSSIYAAADQWLDVSH-VKNKMKERGLR 348
+ N + E + P + V+LS+ A+ LD+ V+ +RGL+
Sbjct: 312 EAMTLFNVMREAGITPNEITMVVVLSA--CASIGALDLGKWVEMYASQRGLQ 361
>30128.m008920 pentatricopeptide repeat-containing protein, putative
Length = 422
Score = 171 bits (434), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 151/239 (63%), Gaps = 1/239 (0%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A+R+ + E ++ +NAM+ G K GD+ +A+++F+ M +R V S+ VM+ G AK G +
Sbjct: 183 ARRMLDEDGESDVICFNAMIDGYYKFGDVDSAKELFEKMEDRSVGSWNVMVSGLAKNGMV 242
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
AR LF+ ++D WS +I GY + G EAL++F M+ ++P ++++ S+++AC
Sbjct: 243 KEARELFNDMREKDEISWSSMIDGYIKGGNYKEALEVFNVMQEEKIRPKKFVLSSVLAAC 302
Query: 123 SQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSY 182
+ +G LD +W+ Y+ ++ + + + AL+DM AKCG +D A +FE M ++++F++
Sbjct: 303 ANLGALDQGRWIHAYVKKNPMYLDAV-LGTALVDMYAKCGRLDMAWDVFETMKEKEVFTW 361
Query: 183 CSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
+MI GL++HG AE A+ LF KM E + + F +L AC+H +V+EG + ++M+
Sbjct: 362 NAMICGLAMHGRAEDAIKLFLKMQKEKVRSNEITFVGLLNACAHKGMVDEGLNILDSME 420
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 13/245 (5%)
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
+I A +FD PK + F+++++I N P +A+ + M N +P+++ SL+
Sbjct: 78 NIDLAFTVFDHVPKPNVFVYNIIIKACLDNDEPFKAICFYYKMVAANARPNKFTYPSLLK 137
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
AC + ++ + + G H+ +A I M A G+M A ++ +E + D+
Sbjct: 138 ACGVATAAKEGVQLHGHVIKQGL-TGDVHIRSAGIQMYATLGHMAAARRMLDEDGESDVI 196
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
+ +MI G G + A LF KM + + ++ V+++ + +V+E + F M
Sbjct: 197 CFNAMIDGYYKFGDVDSAKELFEKMEDRSV----GSWNVMVSGLAKNGMVKEARELFNDM 252
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVES---HASAWGALLGACKFYGE 297
+ K + ++ M+D + G KEA E+ M E ++L AC G
Sbjct: 253 REKDEI-----SWSSMIDGYIKGGNYKEALEVFNVMQEEKIRPKKFVLSSVLAACANLGA 307
Query: 298 VELGE 302
++ G
Sbjct: 308 LDQGR 312
>30055.m001630 pentatricopeptide repeat-containing protein, putative
Length = 384
Score = 170 bits (431), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 140/233 (60%), Gaps = 1/233 (0%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP 73
N+ A+V K G + AR +FDD+ ++ VS+ MIDGY + G+ SA LFD+ P
Sbjct: 131 NVMVGTALVDMYAKCGKVQLARLIFDDLKVKNSVSWNTMIDGYMRNGETGSAMELFDEMP 190
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKW 133
++DA W+V I G+ + G +AL+ F+ M++ V+PD +++++SAC+ +G L L W
Sbjct: 191 EKDAISWTVFIDGFIKKGHFEQALEWFREMQVSKVEPDYVTIIAVLSACANLGALGLGLW 250
Query: 134 VDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHG 193
+ Y+ + + +LIDM ++CG ++ A ++F +M KR L S+ S+I G + +G
Sbjct: 251 IHRYVLEKEFR-NNVRIGNSLIDMYSRCGCIELARQVFHKMLKRTLVSWNSIIVGFAANG 309
Query: 194 YAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSM 246
+AE+A+ F M EG PD +FT LTACSH +V+EG F+ MK ++
Sbjct: 310 FAEEALEYFGLMQKEGFKPDGVSFTGALTACSHAGMVDEGLKCFDIMKRHFTF 362
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 33/180 (18%)
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV--GNLDLAKWVDCY 137
W+ IS + NG EA +F M L V+P+ +L+S C+ + + Y
Sbjct: 62 WTSSISRHCCNGQLPEAASLFTQMRLAAVEPNHITFATLISFCADFPFQGKSIGPSIHAY 121
Query: 138 LSQSSIDIGQTHVVAALIDMNAKCGNMDRAN----------------------------- 168
+ + +D V AL+DM AKCG + A
Sbjct: 122 VRKLGLDTCNVMVGTALVDMYAKCGKVQLARLIFDDLKVKNSVSWNTMIDGYMRNGETGS 181
Query: 169 --KLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH 226
+LF+EMP++D S+ I G G+ EQA+ F +M + PD +L+AC++
Sbjct: 182 AMELFDEMPEKDAISWTVFIDGFIKKGHFEQALEWFREMQVSKVEPDYVTIIAVLSACAN 241
>30147.m014128 pentatricopeptide repeat-containing protein, putative
Length = 438
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 140/232 (60%), Gaps = 2/232 (0%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A++VF +M E N+ +WNA++ +GGD+ A K+F M RD+ S+ VM+ GY K+G++
Sbjct: 160 ARQVFGEMHEPNVIAWNAVIAACFRGGDVKEAGKMFSLMVFRDLTSWNVMLAGYVKIGEL 219
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
AR +F + +D WS +I G+A NG +EA F+ + +P+E + ++SAC
Sbjct: 220 QLAREMFLEMAVKDDVSWSTMIVGFAHNGCFDEAFGYFRELLRKGTRPNEVSLTGVLSAC 279
Query: 123 SQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFS 181
+Q G + K + ++ ++ + + V AL+D +KCGN+ A +FE MP K+ + S
Sbjct: 280 AQAGAFEFGKILHGFIEKAGL-LWIISVNNALLDTYSKCGNLGMAQLVFERMPEKKSIIS 338
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEG 233
+ SM+ L++HG E+A+ LF++M G PD F ++L ACSH LVE+G
Sbjct: 339 WTSMMACLAMHGLGEEAIKLFHEMEEYGTRPDEITFILLLYACSHAGLVEQG 390
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 140/327 (42%), Gaps = 22/327 (6%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER-----DVVSFTVMIDG 55
D A +F P ++ +N ++ GL + + F ++ + D SF ++
Sbjct: 56 DYALSLFRDTPNPDVFMYNTLIRGLAESDSPQKSIATFLELRKESALSPDSFSFAFVLKA 115
Query: 56 YAKVGDIASARALFDKAPK----RDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
A + + L +A K F+ + LIS Y + G A ++F M +P+
Sbjct: 116 AAYLRSLRGGIQLHCQAWKYGLNAHLFVGTTLISMYGECGCVGYARQVFGEMH----EPN 171
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
++++AC + G++ A + D+ +V+ A K G + A ++F
Sbjct: 172 VIAWNAVIAACFRGGDVKEAG--KMFSLMVFRDLTSWNVMLA---GYVKIGELQLAREMF 226
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
EM +D S+ +MI G + +G ++A G F ++L +G P+ + T +L+AC+ E
Sbjct: 227 LEMAVKDDVSWSTMIVGFAHNGCFDEAFGYFRELLRKGTRPNEVSLTGVLSACAQAGAFE 286
Query: 232 EGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
GK K ++ ++D S+ G L A + + MP + +W +++
Sbjct: 287 FGK-ILHGFIEKAGLLWIISVNNALLDTYSKCGNLGMAQLVFERMPEKKSIISWTSMMAC 345
Query: 292 CKFYGEVELGEIVANRLFELEPENSSP 318
+G LGE E+E + P
Sbjct: 346 LAMHG---LGEEAIKLFHEMEEYGTRP 369
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 40/171 (23%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFT-------- 50
A+ +F++M ++ SW+ M+ G G A F ++ + VS T
Sbjct: 222 AREMFLEMAVKDDVSWSTMIVGFAHNGCFDEAFGYFRELLRKGTRPNEVSLTGVLSACAQ 281
Query: 51 ---------------------------VMIDGYAKVGDIASARALFDKAPKRDAFL-WSV 82
++D Y+K G++ A+ +F++ P++ + + W+
Sbjct: 282 AGAFEFGKILHGFIEKAGLLWIISVNNALLDTYSKCGNLGMAQLVFERMPEKKSIISWTS 341
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKW 133
+++ A +GL EA+K+F ME +PDE + L+ ACS G ++ W
Sbjct: 342 MMACLAMHGLGEEAIKLFHEMEEYGTRPDEITFILLLYACSHAGLVEQGSW 392
>30174.m008876 pentatricopeptide repeat-containing protein, putative
Length = 450
Score = 169 bits (427), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 139/231 (60%), Gaps = 2/231 (0%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A +F +MPER+L SWN+M+ G K G + +A+ +FD MPER ++S+ M+DGYAK+G +
Sbjct: 219 AWNLFEKMPERDLISWNSMIDGCAKRGRMEDAQALFDTMPERTIISWANMVDGYAKLGYV 278
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMEL-MNVKPDEYIMVSLMSA 121
AR FD P RD + ++SGY QNG EAL IF M+ N+ PD ++ ++SA
Sbjct: 279 DIARKFFDNMPDRDVVACNAMMSGYVQNGYCMEALGIFHDMQRESNLCPDNATLLIVLSA 338
Query: 122 CSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS 181
+Q+G+++ + CY+ ++ + + + ALIDM +KCG+ + A +FE + +
Sbjct: 339 IAQLGHIEKGVEIHCYIQENGFSL-EEKLGVALIDMYSKCGSAENAMLVFEGIKGKTADH 397
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEE 232
+ +MI GL+IHG E A+ +M G PD+ F +L AC H L++E
Sbjct: 398 WNAMINGLAIHGMGELALHFLIEMERVGSKPDDITFIGLLNACGHAGLMKE 448
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 159/306 (51%), Gaps = 22/306 (7%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPK--RD 76
N ++G VK + AR+VFD MP RD VS+ MI GY K G+I AR L+D P R+
Sbjct: 139 NCLIGLYVKCRCIDYARQVFDKMPMRDSVSYNSMIAGYVKHGNIDLARQLYDVMPINWRN 198
Query: 77 AFLWSVLISGY--AQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV 134
W+ L+SGY + NG A +F+ M + D S++ C++ G ++ A+ +
Sbjct: 199 LVSWNSLLSGYMRSDNGFE-LAWNLFEKMP----ERDLISWNSMIDGCAKRGRMEDAQAL 253
Query: 135 DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGY 194
+ + +I A ++D AK G +D A K F+ MP RD+ + +M+ G +GY
Sbjct: 254 FDTMPERTII-----SWANMVDGYAKLGYVDIARKFFDNMPDRDVVACNAMMSGYVQNGY 308
Query: 195 AEQAVGLFNKMLNE-GLIPDNAAFTVILTACSHGRLVEEG-KHYFETMKSKYSMVPSPEH 252
+A+G+F+ M E L PDNA ++L+A + +E+G + + ++ +S+ +
Sbjct: 309 CMEALGIFHDMQRESNLCPDNATLLIVLSAIAQLGHIEKGVEIHCYIQENGFSL--EEKL 366
Query: 253 YACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELE 312
++D+ S+ G + A + + + ++ A W A++ +G +GE+ + L E+E
Sbjct: 367 GVALIDMYSKCGSAENAMLVFEGIKGKT-ADHWNAMINGLAIHG---MGELALHFLIEME 422
Query: 313 PENSSP 318
S P
Sbjct: 423 RVGSKP 428
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 113/244 (46%), Gaps = 18/244 (7%)
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKW 133
K D FLW+ +I ++ P +AL IF M V D++ + ++ ACS++G +
Sbjct: 62 KEDPFLWNAVIKTHSHGNDPKQALIIFSLMLQNGVFVDKFSVSLVLKACSRLGLVKEGMQ 121
Query: 134 VDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHG 193
+ L + + LI + KC +D A ++F++MP RD SY SMI G HG
Sbjct: 122 IHGLLRKLKFG-SDVFLQNCLIGLYVKCRCIDYARQVFDKMPMRDSVSYNSMIAGYVKHG 180
Query: 194 YAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPE-- 251
+ A L++ M P N V + G + + FE + + +P +
Sbjct: 181 NIDLARQLYDVM------PINWRNLVSWNSLLSGYMRSDNG--FELAWNLFEKMPERDLI 232
Query: 252 HYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEI-VANRLFE 310
+ M+D ++ G++++A L +MP E +W ++ G +LG + +A + F+
Sbjct: 233 SWNSMIDGCAKRGRMEDAQALFDTMP-ERTIISWANMVD-----GYAKLGYVDIARKFFD 286
Query: 311 LEPE 314
P+
Sbjct: 287 NMPD 290
>29841.m002889 pentatricopeptide repeat-containing protein, putative
Length = 628
Score = 169 bits (427), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 134/233 (57%), Gaps = 5/233 (2%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
NA+V K G + AR VFD MP R+VVS T M+ GYAK + +AR LF K +R+
Sbjct: 292 NALVDMYAKCGRINEARCVFDRMPIRNVVSETSMVSGYAKTASVKAARLLFTKMIERNVV 351
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ LI+GY QNG EAL++F+ ++ + P Y +L++AC+ + +L L + ++
Sbjct: 352 SWNALIAGYTQNGENEEALRLFRMLKREAICPTHYTFGNLLNACANLADLQLGRQAHAHV 411
Query: 139 SQSSIDI-----GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHG 193
+ V ALIDM KCG+++ ++FE M +RD S+ +MI G + +G
Sbjct: 412 LKHGFRFQYGEESDVFVGNALIDMYMKCGSVEEGCRIFENMVERDYVSWNAMIVGYAQNG 471
Query: 194 YAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSM 246
Y +A+GLF KML G PD+ L ACSH LV+EG+ +F +M +Y +
Sbjct: 472 YGMEALGLFRKMLASGEKPDHVTMIGALCACSHAGLVQEGRKHFSSMTEEYGL 524
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 145/293 (49%), Gaps = 14/293 (4%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A VF+Q N ++ K G +ARK+FD MPE++V S+ ++ K G +
Sbjct: 51 AYEVFIQ---------NRLIDAYGKCGCFDDARKIFDQMPEKNVFSWNAIVSTLVKSGFL 101
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
LF P+ D W+ LI+G+AQ+ EAL F M +EY S +SAC
Sbjct: 102 DEGARLFVSMPEPDQCSWNSLIAGFAQHDRFEEALNYFVKMHRKGFVLNEYTFGSGLSAC 161
Query: 123 SQVGNLDLAKWVDCYL--SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
+ + +L + + + SQ +D+ ++ +ALID+ +KCG +D A ++F+ M +R++
Sbjct: 162 AGLKDLKIGTQIHGLMLKSQFLLDV---YMGSALIDIYSKCGFVDCAQRVFDGMMERNVV 218
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
S+ S+I +G + +A+ +F +M+ G PD +++AC+ ++G +
Sbjct: 219 SWNSLITCYEQNGPSREALEIFMRMMESGFEPDEVTLASVVSACASLAAAKQGLEIHACV 278
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACK 293
+ + +VD+ ++ G++ EA + MP+ + S + G K
Sbjct: 279 VKRDKLRDDLILSNALVDMYAKCGRINEARCVFDRMPIRNVVSETSMVSGYAK 331
>30174.m008866 pentatricopeptide repeat-containing protein, putative
Length = 474
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 139/231 (60%), Gaps = 2/231 (0%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A +F +MPER+L SWN+M+ G K G + +A+ +FD MPER ++S+ M+DGYAK+G +
Sbjct: 243 AWNLFEKMPERDLISWNSMIDGCAKRGRMEDAQALFDTMPERTIISWANMVDGYAKLGYV 302
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMEL-MNVKPDEYIMVSLMSA 121
AR FD P RD + ++SGY QNG EAL IF M+ N+ PD ++ ++SA
Sbjct: 303 DIARKFFDNMPDRDVVACNAMMSGYVQNGYCMEALGIFHDMQRESNLCPDNATLLIVLSA 362
Query: 122 CSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS 181
+Q+G+++ + CY+ ++ + + + ALIDM +KCG+ + A +FE + +
Sbjct: 363 IAQLGHIEKGVEIHCYIQENGFSL-EEKLGVALIDMYSKCGSAENAMLVFEGIKGKTADH 421
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEE 232
+ +MI GL+IHG E A+ +M G PD+ F +L AC H L++E
Sbjct: 422 WNAMINGLAIHGMGELALHFLIEMERVGSKPDDITFIGLLNACGHAGLMKE 472
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 159/306 (51%), Gaps = 22/306 (7%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPK--RD 76
N ++G VK + AR+VFD MP RD VS+ MI GY K G+I AR L+D P R+
Sbjct: 163 NCLIGLYVKCRCIDYARQVFDKMPMRDSVSYNSMIAGYVKHGNIDLARQLYDVMPINWRN 222
Query: 77 AFLWSVLISGY--AQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV 134
W+ L+SGY + NG A +F+ M + D S++ C++ G ++ A+ +
Sbjct: 223 LVSWNSLLSGYMRSDNGF-ELAWNLFEKMP----ERDLISWNSMIDGCAKRGRMEDAQAL 277
Query: 135 DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGY 194
+ + +I A ++D AK G +D A K F+ MP RD+ + +M+ G +GY
Sbjct: 278 FDTMPERTII-----SWANMVDGYAKLGYVDIARKFFDNMPDRDVVACNAMMSGYVQNGY 332
Query: 195 AEQAVGLFNKMLNE-GLIPDNAAFTVILTACSHGRLVEEG-KHYFETMKSKYSMVPSPEH 252
+A+G+F+ M E L PDNA ++L+A + +E+G + + ++ +S+ +
Sbjct: 333 CMEALGIFHDMQRESNLCPDNATLLIVLSAIAQLGHIEKGVEIHCYIQENGFSL--EEKL 390
Query: 253 YACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELE 312
++D+ S+ G + A + + + ++ A W A++ +G +GE+ + L E+E
Sbjct: 391 GVALIDMYSKCGSAENAMLVFEGIKGKT-ADHWNAMINGLAIHG---MGELALHFLIEME 446
Query: 313 PENSSP 318
S P
Sbjct: 447 RVGSKP 452
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 113/244 (46%), Gaps = 18/244 (7%)
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKW 133
K D FLW+ +I ++ P +AL IF M V D++ + ++ ACS++G +
Sbjct: 86 KEDPFLWNAVIKTHSHGNDPKQALIIFSLMLQNGVFVDKFSVSLVLKACSRLGLVKEGMQ 145
Query: 134 VDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHG 193
+ L + + LI + KC +D A ++F++MP RD SY SMI G HG
Sbjct: 146 IHGLLRKLKFG-SDVFLQNCLIGLYVKCRCIDYARQVFDKMPMRDSVSYNSMIAGYVKHG 204
Query: 194 YAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPE-- 251
+ A L++ M P N V + G + + FE + + +P +
Sbjct: 205 NIDLARQLYDVM------PINWRNLVSWNSLLSGYMRSDNG--FELAWNLFEKMPERDLI 256
Query: 252 HYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEI-VANRLFE 310
+ M+D ++ G++++A L +MP E +W ++ G +LG + +A + F+
Sbjct: 257 SWNSMIDGCAKRGRMEDAQALFDTMP-ERTIISWANMVD-----GYAKLGYVDIARKFFD 310
Query: 311 LEPE 314
P+
Sbjct: 311 NMPD 314
>28320.m001094 pentatricopeptide repeat-containing protein, putative
Length = 486
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 179/323 (55%), Gaps = 6/323 (1%)
Query: 20 AMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFL 79
+++ V+ G+L NAR VF+ RDVVS+T +I GYA G + A LFD+ P RD
Sbjct: 164 SLITMYVQNGELGNARLVFERSSMRDVVSYTALITGYASRGFLDQALELFDEIPVRDVVS 223
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLS 139
W+ +I+GY Q+G EAL F+ M NV P+ ++S++SAC+Q G+L + WV ++
Sbjct: 224 WNAMIAGYTQSGRFEEALIFFEEMLRANVTPNMSTLLSVLSACAQSGSLKMGNWVSSWIE 283
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAV 199
+ ++ V+ ALIDM AKCG+++ A LFE + +++ S+ MI G + ++A+
Sbjct: 284 EHGLE-SNIKVMNALIDMYAKCGDLENALHLFEGIKNKNVISWNVMIGGYTHLSCYKEAL 342
Query: 200 GLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDL 259
GLF +ML + P++ IL AC++ + GK + + + + ++D+
Sbjct: 343 GLFRQMLQSNVEPNDVTLLSILPACANLGALGLGKWIHAYIDKNMKNLANNALWTSLIDM 402
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE--LEPENSS 317
++ G ++ A ++ M +S AS W A++ +G+ +L + +R+ + L P+N +
Sbjct: 403 YAKCGNIEVANQIFDGMNPKSLAS-WNAMISGFAMHGQADLAISLFSRMTKEGLVPDNIT 461
Query: 318 PYVLLSSIYAAADQWLDVSHVKN 340
+LS+ A LD+ H+ +
Sbjct: 462 FIGVLSACNHAG--LLDLGHINH 482
Score = 144 bits (363), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 145/302 (48%), Gaps = 70/302 (23%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGD 61
NA+ VF + R++ S+ A++ G G L A ++FD++P RDVVS+ MI GY + G
Sbjct: 177 NARLVFERSSMRDVVSYTALITGYASRGFLDQALELFDEIPVRDVVSWNAMIAGYTQSGR 236
Query: 62 IASARALFDK------APKRDAFL----------------W-----------------SV 82
A F++ P L W +
Sbjct: 237 FEEALIFFEEMLRANVTPNMSTLLSVLSACAQSGSLKMGNWVSSWIEEHGLESNIKVMNA 296
Query: 83 LISGYAQNGLPNEALKIFQG-------------------------------MELMNVKPD 111
LI YA+ G AL +F+G M NV+P+
Sbjct: 297 LIDMYAKCGDLENALHLFEGIKNKNVISWNVMIGGYTHLSCYKEALGLFRQMLQSNVEPN 356
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
+ ++S++ AC+ +G L L KW+ Y+ ++ ++ + +LIDM AKCGN++ AN++F
Sbjct: 357 DVTLLSILPACANLGALGLGKWIHAYIDKNMKNLANNALWTSLIDMYAKCGNIEVANQIF 416
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
+ M + L S+ +MI G ++HG A+ A+ LF++M EGL+PDN F +L+AC+H L++
Sbjct: 417 DGMNPKSLASWNAMISGFAMHGQADLAISLFSRMTKEGLVPDNITFIGVLSACNHAGLLD 476
Query: 232 EG 233
G
Sbjct: 477 LG 478
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 121/262 (46%), Gaps = 32/262 (12%)
Query: 60 GDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLM 119
GD++ A LF K + +W+ +I G + + P A++ + M P+ Y ++
Sbjct: 72 GDLSYALLLFKSIGKPNQIIWNNIIRGLSLSESPILAIQYYVDMISSGFTPNTYTYPFVL 131
Query: 120 SACSQVGNLDLAKWV-----------DCYLSQSSI-------DIGQTHVV---------- 151
+C+++ + K + D ++ S I ++G +V
Sbjct: 132 KSCARISSTHEGKQIHGQILKLGFDNDAFVHTSLITMYVQNGELGNARLVFERSSMRDVV 191
Query: 152 --AALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEG 209
ALI A G +D+A +LF+E+P RD+ S+ +MI G + G E+A+ F +ML
Sbjct: 192 SYTALITGYASRGFLDQALELFDEIPVRDVVSWNAMIAGYTQSGRFEEALIFFEEMLRAN 251
Query: 210 LIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEA 269
+ P+ + +L+AC+ ++ G ++ + ++ + + + ++D+ ++ G L+ A
Sbjct: 252 VTPNMSTLLSVLSACAQSGSLKMG-NWVSSWIEEHGLESNIKVMNALIDMYAKCGDLENA 310
Query: 270 YELLKSMPVESHASAWGALLGA 291
L + + + +W ++G
Sbjct: 311 LHLFEGIK-NKNVISWNVMIGG 331
>29844.m003243 pentatricopeptide repeat-containing protein, putative
Length = 606
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/199 (41%), Positives = 124/199 (62%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
NA++ VK G L+ AR++FD M +DV S+T M++GYAK G++ AR FD PKR+
Sbjct: 398 NAILDMYVKCGCLVAAREIFDSMGTKDVFSWTSMVNGYAKTGELEIARKFFDDMPKRNVV 457
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ +I+GY+QN P +A+ +F M + P E +V ++SAC Q+G LDL + + Y
Sbjct: 458 SWNAMIAGYSQNNQPKKAIVLFHHMVGEGLIPIENTLVCVLSACGQLGYLDLGRLIHMYH 517
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+ + ALIDM AKCG +D A ++F MP RDL S+ SMI + HG+A+QA
Sbjct: 518 IERKQKGTSVIIANALIDMYAKCGVIDAAARVFNGMPGRDLVSWNSMIAACASHGHAKQA 577
Query: 199 VGLFNKMLNEGLIPDNAAF 217
+ +F +M++EG PD+ F
Sbjct: 578 LLMFGQMIHEGFKPDDITF 596
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 145/285 (50%), Gaps = 45/285 (15%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I Y+ G + AR +FD+ P RD W+ +I GY+ + +ALK+F M L +V+P+
Sbjct: 299 LIHFYSVHGCLVLARKVFDETPARDVVSWTSMIDGYSTHDYYTDALKLFDSMLLSDVEPN 358
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC---------- 161
E M+S++SACSQ G+L L K + Y+ + ++++ +++ A++DM KC
Sbjct: 359 EVTMISVLSACSQKGDLSLGKSIHEYVRRKNLNL-SVNLMNAILDMYVKCGCLVAAREIF 417
Query: 162 ---------------------GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
G ++ A K F++MPKR++ S+ +MI G S + ++A+
Sbjct: 418 DSMGTKDVFSWTSMVNGYAKTGELEIARKFFDDMPKRNVVSWNAMIAGYSQNNQPKKAIV 477
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSH------GRLVEEGKHYFETMKSKYSMVPSPEHYA 254
LF+ M+ EGLIP +L+AC GRL+ ++ E + S++ +
Sbjct: 478 LFHHMVGEGLIPIENTLVCVLSACGQLGYLDLGRLIH--MYHIERKQKGTSVIIANA--- 532
Query: 255 CMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
++D+ ++ G + A + MP S W +++ AC +G +
Sbjct: 533 -LIDMYAKCGVIDAAARVFNGMPGRDLVS-WNSMIAACASHGHAK 575
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 123/275 (44%), Gaps = 11/275 (4%)
Query: 42 PERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQ 101
P V++F + D GDI A LF++ + ++W+ +I G++ +P L F
Sbjct: 192 PVSRVLAFCALAD----TGDIRHAHLLFNQIEYPNTYIWNTMIRGFSNAKMPVMGLSFFW 247
Query: 102 GMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC 161
M V+ D V + A Q + + C + + V LI +
Sbjct: 248 QMVRERVEMDTRSFVFALKASEQFLTALEGESIHCAIWKIGFPCALL-VQNGLIHFYSVH 306
Query: 162 GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVIL 221
G + A K+F+E P RD+ S+ SMI G S H Y A+ LF+ ML + P+ +L
Sbjct: 307 GCLVLARKVFDETPARDVVSWTSMIDGYSTHDYYTDALKLFDSMLLSDVEPNEVTMISVL 366
Query: 222 TACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESH 281
+ACS + GK E ++ K ++ S ++D+ + G L A E+ SM +
Sbjct: 367 SACSQKGDLSLGKSIHEYVRRK-NLNLSVNLMNAILDMYVKCGCLVAAREIFDSMGTKD- 424
Query: 282 ASAWGALLGACKFYGEVELGEIVANRLFELEPENS 316
+W +++ GE+E +A + F+ P+ +
Sbjct: 425 VFSWTSMVNGYAKTGELE----IARKFFDDMPKRN 455
>28672.m000057 pentatricopeptide repeat-containing protein, putative
Length = 561
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 197/398 (49%), Gaps = 53/398 (13%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLV----KGGDLINARKVFDDMPERDVVSFTVMIDG--- 55
A +VF +M +++ SW M+ L+ L+ K+ D M + D V +I
Sbjct: 165 AAKVFDEMKFKDVISWTTMMAVLIDLECASDALVLLSKMKDSMLDLDSVVLMHLISACAI 224
Query: 56 --------------------------------YAKVGDIASARALFDKAPKRDAFLWSVL 83
Y+K GD+ +R +FD+ ++ W+ +
Sbjct: 225 LGDLGKGRQCHAQAVIRGFKSELPLVNSIIAMYSKCGDLRFSRIVFDQTTEKSLVSWTAM 284
Query: 84 ISGYAQNGLPNEALKIFQGMELM-NVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+SG QNG EAL + L N D ++V+ ++A S++ + + + + CY+ ++
Sbjct: 285 VSGCVQNGCSREALDLAIKARLEENYSFDSVMLVNALTASSELVDKEFCQQLHCYILETG 344
Query: 143 IDIGQTHVVA-ALIDMNAKCGNMDRANKLFEEMPK-RDLFSYCSMIQGLSIHGYAEQAVG 200
Q +V +LI +KCGN+D A+ +F+EM +++ S+ ++I G I+G+ E A+
Sbjct: 345 FS--QYRLVQNSLISAYSKCGNIDLAHIVFKEMDSLQNVVSWNAIINGYGINGHGEVALA 402
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
L+++M G PD+A ++ IL+ACSH L+ +G F M + P +HY C++DLL
Sbjct: 403 LYHEMRKGGEDPDSATYSCILSACSHAGLIRDGLMIFNRMVKDNKIRPRQQHYGCVIDLL 462
Query: 261 SRSGQLKEA--YELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
R+G L + ++ L+ ++ + W ALL C +G VEL E+ A L E P S
Sbjct: 463 MRAGCLSDTNDWKFLE----DTCPNVWKALLSGCALHGNVELAELAAKYLLEKNPGESVV 518
Query: 319 YVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
VLLS++Y + ++ D ++ +G K PG S++
Sbjct: 519 LVLLSNVYVSVGRFQDAESLR---LTKGFVKNPGISYL 553
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 171/397 (43%), Gaps = 66/397 (16%)
Query: 5 RVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDG----- 55
+VF ++ L + NA + GL+ G I +F + + +V + +I G
Sbjct: 66 KVFKELNNAGLITCNATLAGLIANGLCIEGFMLFKEFRKFGLVPNVATVLTLIKGCVALE 125
Query: 56 ------------------------------YAKVGDIASARALFDKAPKRDAFLWSVLIS 85
Y++ D+ +A +FD+ +D W+ +++
Sbjct: 126 IKMLCESVYGLIFKFGLSSDVNVNNSVVNMYSRFQDLNAAAKVFDEMKFKDVISWTTMMA 185
Query: 86 GYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI 145
++AL + M+ + D +++ L+SAC+ +G DL K C+ +Q+ I
Sbjct: 186 VLIDLECASDALVLLSKMKDSMLDLDSVVLMHLISACAILG--DLGKGRQCH-AQAVIRG 242
Query: 146 GQTH--VVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
++ +V ++I M +KCG++ + +F++ ++ L S+ +M+ G +G + +A+ L
Sbjct: 243 FKSELPLVNSIIAMYSKCGDLRFSRIVFDQTTEKSLVSWTAMVSGCVQNGCSREALDLAI 302
Query: 204 KM-LNEGLIPDNAAFTVILTACSHGRLVEE------GKHYFETMKSKYSMVPSPEHYACM 256
K L E D+ LTA S LV++ + ET S+Y +V + +
Sbjct: 303 KARLEENYSFDSVMLVNALTASS--ELVDKEFCQQLHCYILETGFSQYRLVQNS-----L 355
Query: 257 VDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFEL----E 312
+ S+ G + A+ + K M + +W A++ YG GE+ E+ E
Sbjct: 356 ISAYSKCGNIDLAHIVFKEMDSLQNVVSWNAIING---YGINGHGEVALALYHEMRKGGE 412
Query: 313 PENSSPYVLLSSIYAAADQWLDVSHVKNKM-KERGLR 348
+S+ Y + S + A D + N+M K+ +R
Sbjct: 413 DPDSATYSCILSACSHAGLIRDGLMIFNRMVKDNKIR 449
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 124/272 (45%), Gaps = 17/272 (6%)
Query: 30 DLINARKVFDDMPERDVVS----FTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
DL+ A + + +R +VS T M+D YAK G+ + +F + + ++
Sbjct: 25 DLMLASSIHGLILKRGLVSDFIVGTAMLDAYAKCGNALESYKVFKELNNAGLITCNATLA 84
Query: 86 GYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI 145
G NGL E +F+ + P+ +++L+ C + L + V + + +
Sbjct: 85 GLIANGLCIEGFMLFKEFRKFGLVPNVATVLTLIKGCVALEIKMLCESVYGLIFKFGLSS 144
Query: 146 GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM 205
+V ++++M ++ +++ A K+F+EM +D+ S+ +M+ L A A+ L +KM
Sbjct: 145 -DVNVNNSVVNMYSRFQDLNAAAKVFDEMKFKDVISWTTMMAVLIDLECASDALVLLSKM 203
Query: 206 LNEGLIPDNAAFTVILTACSHGRLVEEGKH-----YFETMKSKYSMVPSPEHYACMVDLL 260
+ L D+ +++AC+ + +G+ KS+ +V S ++ +
Sbjct: 204 KDSMLDLDSVVLMHLISACAILGDLGKGRQCHAQAVIRGFKSELPLVNS------IIAMY 257
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGAC 292
S+ G L+ + ++ E +W A++ C
Sbjct: 258 SKCGDLRFS-RIVFDQTTEKSLVSWTAMVSGC 288
>29646.m001096 pentatricopeptide repeat-containing protein, putative
Length = 792
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 135/250 (54%), Gaps = 1/250 (0%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
Y K G L + + D W++ I+ A+NG E ++F+ M + + PD Y
Sbjct: 489 YNKAGHYYKTLELLSQLEEPDNVSWNIAIAACARNGNYKEVFELFKQMLVAQIHPDNYTY 548
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
VSL+S+ SQ+ +L L + +L +++ T V L+DM KCG + + K+F M
Sbjct: 549 VSLLSSSSQICDLALGSSIHGFLIKNNFSSCDTFVCNVLLDMYGKCGCLRSSVKIFNSMR 608
Query: 176 KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
R+L ++ ++I L I+ A +A+ F M ++GL PD AF +LTAC HG LV EG
Sbjct: 609 DRNLITWTALISALGINSCAHEALERFKDMEHQGLRPDKVAFIAVLTACRHGALVGEGIE 668
Query: 236 YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFY 295
F+ MKS Y + P +HY C+VDL SR G +KEA +++ SMP +A W L CK Y
Sbjct: 669 LFKKMKS-YGLEPEMDHYHCLVDLFSRHGHVKEAEKVISSMPCPPNALIWRTFLEGCKKY 727
Query: 296 GEVELGEIVA 305
E IV
Sbjct: 728 RSKEDQLIVC 737
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 95/195 (48%), Gaps = 3/195 (1%)
Query: 42 PERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQ 101
P + F +I Y +++ AR +FD P+R ++ +I+ Y + G EAL +F
Sbjct: 44 PNQPAYLFNNIISLYTSFSELSLARKVFDNMPQRSIASYNSIITSYCKYGYLEEALGVFS 103
Query: 102 GMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC 161
M +P+ + + L+S CS++ +L + + ++ + V AL+++ +
Sbjct: 104 RMRDCGFRPNNFTLSGLLS-CSKM-DLSIGLQLQALAMKNGLFYIDAFVGTALLNVFGRW 161
Query: 162 GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE-GLIPDNAAFTVI 220
G ++ A +FE++P + L ++ S+I HGY E + F ++ E G +F +
Sbjct: 162 GWLNEALHVFEDLPIKSLVTWNSIICLFGQHGYVEDCIIYFCELHREIGCCLSECSFVGV 221
Query: 221 LTACSHGRLVEEGKH 235
L+ G+ +E G+
Sbjct: 222 LSGLVCGKYLEFGEQ 236
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 29 GDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYA 88
G I+ + ++ D V++D Y K G + S+ +F+ R+ W+ LIS
Sbjct: 564 GSSIHGFLIKNNFSSCDTFVCNVLLDMYGKCGCLRSSVKIFNSMRDRNLITWTALISALG 623
Query: 89 QNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ---VG-NLDLAKWVDCYLSQSSID 144
N +EAL+ F+ ME ++PD+ +++++AC VG ++L K + Y + +D
Sbjct: 624 INSCAHEALERFKDMEHQGLRPDKVAFIAVLTACRHGALVGEGIELFKKMKSYGLEPEMD 683
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
H L+D+ ++ G++ A K+ MP
Sbjct: 684 --HYH---CLVDLFSRHGHVKEAEKVISSMP 709
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 144/332 (43%), Gaps = 48/332 (14%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAK---- 58
A++VF MP+R++ S+N+++ K G L A VF M + + G
Sbjct: 67 ARKVFDNMPQRSIASYNSIITSYCKYGYLEEALGVFSRMRDCGFRPNNFTLSGLLSCSKM 126
Query: 59 ---VGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
+G A A+ + DAF+ + L++ + + G NEAL +F+ + + ++ I+
Sbjct: 127 DLSIGLQLQALAMKNGLFYIDAFVGTALLNVFGRWGWLNEALHVFEDLPIKSLVTWNSII 186
Query: 116 V-----------------------SLMSACSQVG---------NLDLAKWVDCYLSQSSI 143
+S CS VG L+ + + ++++
Sbjct: 187 CLFGQHGYVEDCIIYFCELHREIGCCLSECSFVGVLSGLVCGKYLEFGEQIHSLVTKTGF 246
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
D VV ++I + KC + A K FEE +D+ ++ +MI L+ +A+ LF
Sbjct: 247 DY-TVSVVNSVISVYVKCATLHLAEKKFEEAACKDIVTWNTMIVALAKSEKPIKALELFF 305
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSM-VPSPEHY--ACMVDLL 260
KM + + P+ F ++++C++ ++ Y E + +K M + Y + +VD
Sbjct: 306 KMPRDAIRPNQITFASLISSCANLQI----PMYAEFIHAKVIMHAFDTDVYVGSALVDYY 361
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGAC 292
++ +L +A + E + +W +L+ C
Sbjct: 362 AKCDKLDDARCCFVKIH-EKNVVSWNSLILGC 392
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 94/190 (49%), Gaps = 12/190 (6%)
Query: 115 MVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQT-----HVVAALIDMNAKCGNMDRANK 169
++ L+ AC++ +L K L +I +G ++ +I + + A K
Sbjct: 14 LLYLLHACTRARSLATTKP----LHALTITLGPNPNQPAYLFNNIISLYTSFSELSLARK 69
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
+F+ MP+R + SY S+I +GY E+A+G+F++M + G P+N + +L+ CS L
Sbjct: 70 VFDNMPQRSIASYNSIITSYCKYGYLEEALGVFSRMRDCGFRPNNFTLSGLLS-CSKMDL 128
Query: 230 VEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
+ MK+ + + A ++++ R G L EA + + +P++S + W +++
Sbjct: 129 SIGLQLQALAMKNGLFYIDAFVGTA-LLNVFGRWGWLNEALHVFEDLPIKSLVT-WNSII 186
Query: 290 GACKFYGEVE 299
+G VE
Sbjct: 187 CLFGQHGYVE 196
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 144/359 (40%), Gaps = 76/359 (21%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP-------------------- 42
A++ F + +++ +WN M+ L K I A ++F MP
Sbjct: 269 AEKKFEEAACKDIVTWNTMIVALAKSEKPIKALELFFKMPRDAIRPNQITFASLISSCAN 328
Query: 43 -------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
+ DV + ++D YAK + AR F K +++ W+ L
Sbjct: 329 LQIPMYAEFIHAKVIMHAFDTDVYVGSALVDYYAKCDKLDDARCCFVKIHEKNVVSWNSL 388
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV--------D 135
I G A N P A+ + M +P+E+ +++ + S + L + D
Sbjct: 389 ILGCA-NKCPYAAISLLVEMLQCGYQPNEFSFSAVLISSSILELQQLHCLIIRMGYDNND 447
Query: 136 CYLSQSSIDIGQTHVVA-ALIDMNA------------------KCGNMDRANKLFEEMPK 176
LS G+ +++ AL+ + A K G+ + +L ++ +
Sbjct: 448 YVLSSLITSYGRNGLISDALVFLAASETPLAAVPSNNVAGIYNKAGHYYKTLELLSQLEE 507
Query: 177 RDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK-- 234
D S+ I + +G ++ LF +ML + PDN + +L++ S + G
Sbjct: 508 PDNVSWNIAIAACARNGNYKEVFELFKQMLVAQIHPDNYTYVSLLSSSSQICDLALGSSI 567
Query: 235 HYFETMKSKYSMVPSPEHYAC--MVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
H F +K+ +S S + + C ++D+ + G L+ + ++ SM + + W AL+ A
Sbjct: 568 HGF-LIKNNFS---SCDTFVCNVLLDMYGKCGCLRSSVKIFNSMR-DRNLITWTALISA 621
>30138.m004037 pentatricopeptide repeat-containing protein, putative
Length = 399
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 128/197 (64%), Gaps = 2/197 (1%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N ++ +K G L RKVF+ MPE+DV+S+T MI YAK GD+ SA LFD P +D
Sbjct: 180 NTLIDMYIKCGVLECGRKVFNAMPEKDVISWTEMIVAYAKSGDMDSAHVLFDGLPVKDMV 239
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV-DCY 137
W+ +++G++QN P EA++ F+ M+ + DE +V ++SACSQ+G + A W+ D
Sbjct: 240 AWTAMVTGFSQNAKPREAIQFFERMQDAGIGTDEVTLVGVISACSQLGAAEYADWIRDIA 299
Query: 138 LSQSSIDIGQTHVV-AALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAE 196
Q D G + V+ +ALIDM +KCG++D A K+F+ + R++FSY SMI G ++HG A+
Sbjct: 300 EKQYGYDWGYSVVLGSALIDMYSKCGSVDCAYKVFKGLKDRNVFSYSSMIMGFAMHGRAD 359
Query: 197 QAVGLFNKMLNEGLIPD 213
A+ LF++M+ G P+
Sbjct: 360 AAIKLFHEMIKTGTAPN 376
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 132/303 (43%), Gaps = 58/303 (19%)
Query: 66 RALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
R++F++ + FL+S +I GY+ G+ +E++K++ M + +V P + ++ AC V
Sbjct: 94 RSIFNQVKFPNPFLYSAVIRGYSIEGILSESVKVYSFMRMEHVGPVSFTFSAIFKACGAV 153
Query: 126 GNLDLAKWVDCYLSQSSIDIG----QTHVVAALIDMNAKCG------------------- 162
G+L L + + SI IG V LIDM KCG
Sbjct: 154 GDLHLGRQ----MHAQSILIGGFCSDLFVSNTLIDMYIKCGVLECGRKVFNAMPEKDVIS 209
Query: 163 ------------NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGL 210
+MD A+ LF+ +P +D+ ++ +M+ G S + +A+ F +M + G+
Sbjct: 210 WTEMIVAYAKSGDMDSAHVLFDGLPVKDMVAWTAMVTGFSQNAKPREAIQFFERMQDAGI 269
Query: 211 IPDNAAFTVILTACSHGRLVEEGKHYFETMKSK------YSMVPSPEHYACMVDLLSRSG 264
D +++ACS E + + + YS+V + ++D+ S+ G
Sbjct: 270 GTDEVTLVGVISACSQLGAAEYADWIRDIAEKQYGYDWGYSVVLG----SALIDMYSKCG 325
Query: 265 QLKEAYELLKSMPVESHASAWGALLG---------ACKFYGEVELGEIVANRLFELEPEN 315
+ AY++ K + + S ++G A K + E+ N++F + E
Sbjct: 326 SVDCAYKVFKGLKDRNVFSYSSMIMGFAMHGRADAAIKLFHEMIKTGTAPNKVFLADLEA 385
Query: 316 SSP 318
S P
Sbjct: 386 SIP 388
>29986.m001622 magnesium/proton exchanger, putative
Length = 1015
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 134/205 (65%), Gaps = 5/205 (2%)
Query: 29 GDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYA 88
G+ AR++FD++ + D+ S+ +I+ KVG + AR LFD P+R+ WS +I+G+
Sbjct: 130 GNFSFARQIFDEIAQPDLPSWNSIINASVKVGLVDVARGLFDVMPERNVITWSCMINGFV 189
Query: 89 QNGLPNEALKIFQGMELM---NVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI 145
+ G EAL +F+ M+++ +VKP+E+ M S++SAC ++G L+ KW Y+ + + I
Sbjct: 190 KCGEYKEALALFREMQMLEVRDVKPNEFTMSSVLSACGRLGALEHGKWAHAYIEKCEMKI 249
Query: 146 GQTHVVAALIDMNAKCGNMDRANKLFEEM-PKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
+ +LIDM AKCG++DRA +F+ + +D+ ++ +MI GL++HGY E+ + LF+K
Sbjct: 250 DIV-LGTSLIDMYAKCGSIDRARLVFDNLGSNKDVMAWSAMISGLAMHGYGEEGLELFSK 308
Query: 205 MLNEGLIPDNAAFTVILTACSHGRL 229
M+N+GL P+N F +L AC HG L
Sbjct: 309 MVNQGLRPNNVTFLAVLYACVHGGL 333
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 103/225 (45%), Gaps = 20/225 (8%)
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
D ++ SL++ S GN A+ + ++Q + + +I+ + K G +D A L
Sbjct: 115 DSFVQTSLINMYSSCGNFSFARQIFDEIAQPDLPSWNS-----IINASVKVGLVDVARGL 169
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLN---EGLIPDNAAFTVILTACSHG 227
F+ MP+R++ ++ MI G G ++A+ LF +M + P+ + +L+AC
Sbjct: 170 FDVMPERNVITWSCMINGFVKCGEYKEALALFREMQMLEVRDVKPNEFTMSSVLSACGRL 229
Query: 228 RLVEEGK---HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASA 284
+E GK Y E + K +V ++D+ ++ G + A + ++ A
Sbjct: 230 GALEHGKWAHAYIEKCEMKIDIVLG----TSLIDMYAKCGSIDRARLVFDNLGSNKDVMA 285
Query: 285 WGALLGACKFYGEVELGEIVANRLFE--LEPENSSPYVLLSSIYA 327
W A++ +G E G + +++ L P N + L+ +YA
Sbjct: 286 WSAMISGLAMHGYGEEGLELFSKMVNQGLRPNNVT---FLAVLYA 327
>27985.m000891 pentatricopeptide repeat-containing protein, putative
Length = 293
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 134/224 (59%), Gaps = 3/224 (1%)
Query: 2 NAKRVFVQMP--ERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKV 59
A+ +F Q+P ++N+ +W MV G G + +AR +F++MP+R+ ++ MI GY K+
Sbjct: 55 TARCLFDQVPLEQKNVVTWTVMVDGYASKGKMADARILFEEMPDRNYFVWSSMISGYCKL 114
Query: 60 GDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLM 119
GD+ AR +FD+ P R+ W+ LI GYAQNG EAL+ F+ M+ +PDE +V ++
Sbjct: 115 GDVKEARCIFDRIPIRNLVNWNSLICGYAQNGFCEEALEAFENMQADGFEPDEITVVGVL 174
Query: 120 SACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDL 179
SAC+Q+G LD+ K V I + Q ++ AL+DM AKCG++ A +FE M ++
Sbjct: 175 SACAQLGLLDVGKDVHRMAYNKGIKLNQ-FIMNALVDMYAKCGDLTTARSIFEGMTYKNN 233
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
+ +MI G +IHG ++A+ F +M PD+ F ++ A
Sbjct: 234 ACWNAMISGFAIHGQCKKALEFFRRMEESNEKPDDITFLILARA 277
>30178.m000869 pentatricopeptide repeat-containing protein, putative
Length = 507
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 125/192 (65%), Gaps = 1/192 (0%)
Query: 27 KGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
K G L +A ++FD+MPERDVV+ T+MI+ Y + G I A +F+ +D W+ +I G
Sbjct: 282 KCGSLKDAERLFDEMPERDVVASTIMINSYFEHGLIQEAIRVFNLTKSKDTVCWTAVIDG 341
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG 146
+NG N AL++F+ M+ +V+P+E +V ++SACSQ+G L+L +WV Y+ + I I
Sbjct: 342 LVRNGEMNRALEVFREMQREDVRPNEVTIVCVLSACSQLGTLELGRWVHSYMGKYGIGIN 401
Query: 147 QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
V ALI+M ++CG++D A ++FEEM +R++ +Y SMI G S+HG + +A+ LF M
Sbjct: 402 H-FVGGALINMYSRCGDIDEAWRVFEEMKERNVITYNSMIVGFSLHGKSSEAIELFRGMT 460
Query: 207 NEGLIPDNAAFT 218
+GL P + F
Sbjct: 461 KQGLEPTSVTFV 472
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 118/272 (43%), Gaps = 34/272 (12%)
Query: 57 AKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMV 116
+ + I A +F + +L++ LI G+ +G + ++ M +++ PD Y++
Sbjct: 180 SNLSSINYASKIFSFTENPNVYLYTALIDGFVLSGSFISGIHLYYQMINLSIVPDNYVIT 239
Query: 117 SLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK 176
S++ AC L V C + + + + + L+ KCG++ A +LF+EMP+
Sbjct: 240 SVLEACGFQLALKQGIQVHCQVLKLGLS-SKRLMRLKLMKFYGKCGSLKDAERLFDEMPE 298
Query: 177 RDLFSYCSMIQGLSIHGYAEQAVGLFN-------------------------------KM 205
RD+ + MI HG ++A+ +FN +M
Sbjct: 299 RDVVASTIMINSYFEHGLIQEAIRVFNLTKSKDTVCWTAVIDGLVRNGEMNRALEVFREM 358
Query: 206 LNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQ 265
E + P+ +L+ACS +E G+ + + KY + + ++++ SR G
Sbjct: 359 QREDVRPNEVTIVCVLSACSQLGTLELGR-WVHSYMGKYGIGINHFVGGALINMYSRCGD 417
Query: 266 LKEAYELLKSMPVESHASAWGALLGACKFYGE 297
+ EA+ + + M E + + +++ +G+
Sbjct: 418 IDEAWRVFEEMK-ERNVITYNSMIVGFSLHGK 448
>28097.m000054 pentatricopeptide repeat-containing protein, putative
Length = 513
Score = 164 bits (414), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 131/220 (59%), Gaps = 1/220 (0%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
D A+ +F +MPE+N SWNAM+ G V+ + A+++F+ MP R++ S+ MI GYA+ G
Sbjct: 291 DEARSIFDKMPEKNSVSWNAMIAGYVQCKRMDMAKELFEAMPFRNISSWNTMITGYAQSG 350
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
++ AR LFD+ P+RD+ WS +I+GY QNG EA+ ++ M+ + S+++
Sbjct: 351 NVPHARNLFDRMPQRDSISWSAMIAGYVQNGCNEEAVHLYVEMKRDGESLNRSSFTSVLT 410
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
AC+ + LDL K +L + G +V AL+ M KCG++D A+ F E+ +DL
Sbjct: 411 ACADIAALDLGKQFHGWLVKVGYQTG-CYVGNALLAMYCKCGSIDEADDAFHEITDKDLI 469
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVI 220
S+ +MI G + HG+ ++A+ +F M G+ PD A +
Sbjct: 470 SWNTMIYGYARHGFGKEALIVFESMKTVGVKPDEATMVTV 509
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 138/236 (58%), Gaps = 9/236 (3%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
++A+R+F + ++ SWN ++GG VK L++AR+VFD +P RD VS+ MI GYA+ G
Sbjct: 198 EDARRLFESKMDWDVVSWNCLMGGFVKKKRLVDARRVFDRIPVRDEVSWNTMITGYAQNG 257
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
++ AR LF+++P +D F W+ ++SGY QNG+ +EA IF M N ++++
Sbjct: 258 ELEEARKLFEESPTQDVFTWTAMVSGYVQNGMVDEARSIFDKMPEKN----SVSWNAMIA 313
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
Q +D+AK + + +I T +I A+ GN+ A LF+ MP+RD
Sbjct: 314 GYVQCKRMDMAKELFEAMPFRNISSWNT-----MITGYAQSGNVPHARNLFDRMPQRDSI 368
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHY 236
S+ +MI G +G E+AV L+ +M +G + ++FT +LTAC+ ++ GK +
Sbjct: 369 SWSAMIAGYVQNGCNEEAVHLYVEMKRDGESLNRSSFTSVLTACADIAALDLGKQF 424
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 152/291 (52%), Gaps = 19/291 (6%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
D A+ +F +MPER+L +WN M+ G V+ +L +AR +F+ MP RDVVS+ M+ GYA+ G
Sbjct: 105 DLAREMFDKMPERDLFTWNVMLSGYVRNKNLTDARGLFERMPRRDVVSWNAMLSGYAQNG 164
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
IA AR +FD+ P +++ W+ L++ Y QNG +A ++F+ K D + +VS
Sbjct: 165 FIAEAREIFDEMPVKNSISWNGLLAAYVQNGRIEDARRLFES------KMD-WDVVSW-- 215
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
C G + + VD I + +I A+ G ++ A KLFEE P +D+F
Sbjct: 216 NCLMGGFVKKKRLVDARRVFDRIPVRDEVSWNTMITGYAQNGELEEARKLFEESPTQDVF 275
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
++ +M+ G +G ++A +F+KM + + NA ++ + ++ K FE M
Sbjct: 276 TWTAMVSGYVQNGMVDEARSIFDKMPEKNSVSWNA----MIAGYVQCKRMDMAKELFEAM 331
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
+ + + M+ ++SG + A L MP + + +W A++
Sbjct: 332 PFR-----NISSWNTMITGYAQSGNVPHARNLFDRMP-QRDSISWSAMIAG 376
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 113/244 (46%), Gaps = 23/244 (9%)
Query: 70 DKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLD 129
+K D W++ I+ + +NG + AL++F M + +++S G D
Sbjct: 50 EKTTDSDIVNWNMAITTHMRNGQCHSALQVFNTMP----RRSTVTYNAMISGYLSNGRFD 105
Query: 130 LAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGL 189
LA+ + + D+ +V ++ + N+ A LFE MP+RD+ S+ +M+ G
Sbjct: 106 LAR--EMFDKMPERDLFTWNV---MLSGYVRNKNLTDARGLFERMPRRDVVSWNAMLSGY 160
Query: 190 SIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPS 249
+ +G+ +A +F++M + ++ ++ +L A +E+ + FE+ K + +V
Sbjct: 161 AQNGFIAEAREIFDEM----PVKNSISWNGLLAAYVQNGRIEDARRLFES-KMDWDVVS- 214
Query: 250 PEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLF 309
+ C++ + +L +A + +PV S W ++ GE+E A +LF
Sbjct: 215 ---WNCLMGGFVKKKRLVDARRVFDRIPVRDEVS-WNTMITGYAQNGELE----EARKLF 266
Query: 310 ELEP 313
E P
Sbjct: 267 EESP 270
>29848.m004644 pentatricopeptide repeat-containing protein, putative
Length = 397
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 129/204 (63%), Gaps = 3/204 (1%)
Query: 43 ERDVVSFTVMIDGYAKVGD-IASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQ 101
+ DV M+ Y D I AR +FD+ KRD WS +I GYA+ G ++A+ +F+
Sbjct: 168 DNDVHVQNTMVHMYCCGRDGIEFAREVFDEMCKRDPVSWSAMIGGYARLGRCSDAIDLFR 227
Query: 102 GMELMNV-KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAK 160
M++ V +PDE MVS++SAC+ +G L+L KWV+ Y+ + + + ALIDM AK
Sbjct: 228 EMQIEGVCRPDEITMVSVLSACTDLGALELGKWVESYIEKEKVQ-KSVELCNALIDMFAK 286
Query: 161 CGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVI 220
CG++D+A KLF M R + S+ S+I GL++HG +AV F +M+ G++PD+ AF +
Sbjct: 287 CGDVDKAIKLFRNMKDRTIVSWTSVIAGLAMHGRGLEAVEFFEEMIKSGVLPDDVAFIGL 346
Query: 221 LTACSHGRLVEEGKHYFETMKSKY 244
L+ACSH LV++G+ YF+ M+ +
Sbjct: 347 LSACSHSGLVDKGREYFDLMRENF 370
>29742.m001368 pentatricopeptide repeat-containing protein, putative
Length = 353
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 148/240 (61%), Gaps = 5/240 (2%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK 71
E ++ + A+V K G + A +VFD++P RD+ ++ +I GY++ GD+ A +F
Sbjct: 114 ESDVIALTALVDMYCKLGMVAFAHRVFDEIPVRDIPTWNALIAGYSRCGDMEGALKIFKL 173
Query: 72 APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN-VKPDEYIMVSLMSACSQVGNLDL 130
P R+ W+ +ISGY+QNG +AL++F ME N ++P+E + S++ AC+ +G L++
Sbjct: 174 MPDRNVVSWTAMISGYSQNGRYAKALELFLKMEKENGLRPNEVTIASILPACANLGALEV 233
Query: 131 AKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM--PKRDLFSYCSMIQG 188
++ Y ++ + + +V AL++M A+CG +D A K+F+++ +R+L S+ SMI G
Sbjct: 234 GDRIETYARENGL-LRNLYVSNALLEMYARCGKIDMARKVFDKIIGKRRNLCSWNSMIMG 292
Query: 189 LSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVP 248
L+IHG + A+ L+N+ML EG+ PD+ F IL AC+HG ++ F M + + VP
Sbjct: 293 LAIHGRSHDALHLYNRMLIEGIAPDDVTFVGILLACTHGGMLNSSA-LFALMINAINTVP 351
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 102/239 (42%), Gaps = 33/239 (13%)
Query: 132 KWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSI 191
K + Y ++ ID +T L + + N+ A+KL + +P ++F Y +IQ S
Sbjct: 5 KQIHAYTLRNGIDYNKT-----LTERLIQIPNVPYAHKLIDLIPSPNVFLYNKLIQAYSF 59
Query: 192 HGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS------HGRLVEEGKHYFETMKSKYS 245
Q ++++M + + FT + AC+ H +++ +F+ +
Sbjct: 60 QNQLHQCFSIYSQMRSRNCTGNQHTFTFLFAACASFFSPLHAQMLHT---HFKKSGFESD 116
Query: 246 MVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVA 305
++ +VD+ + G + A+ + +PV W AL+ G++E A
Sbjct: 117 VIA----LTALVDMYCKLGMVAFAHRVFDEIPVRD-IPTWNALIAGYSRCGDME----GA 167
Query: 306 NRLFELEPE-NSSPYVLLSSIYAAADQWLDVSHVKNKM-KERGLRK--------LPGCS 354
++F+L P+ N + + S Y+ ++ + KM KE GLR LP C+
Sbjct: 168 LKIFKLMPDRNVVSWTAMISGYSQNGRYAKALELFLKMEKENGLRPNEVTIASILPACA 226
>29904.m002919 pentatricopeptide repeat-containing protein, putative
Length = 404
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 137/215 (63%), Gaps = 5/215 (2%)
Query: 3 AKRVFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAK 58
A +VF + P+R + WN ++ G K GD+ A ++F+DMP R+ S+ +I+G+ K
Sbjct: 187 ALKVFDESPQRFHEGSTLLWNVLINGCCKVGDMRKALELFEDMPLRNTASWNSLINGFFK 246
Query: 59 VGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSL 118
+GD+ A FD+ P +D W+ +++G++QNG +AL +F M +VKP+++ +VS
Sbjct: 247 IGDLEQAIEHFDRMPVKDVVSWTTMVNGFSQNGDHEKALSVFSRMLDEDVKPNDFTIVSA 306
Query: 119 MSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRD 178
+SAC+++G L+ + YL + + + V AL+DM+AKCGN++ A+++F+E ++D
Sbjct: 307 LSACAKIGALEAGLRIHKYLKDNGFRLNRA-VGNALVDMHAKCGNINSASQVFKEAKEKD 365
Query: 179 LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPD 213
+ ++ MI G +IHG+ E+A+ F +M+ G+ PD
Sbjct: 366 IITWSVMIWGWAIHGHFEEAIQCFKQMMYAGIQPD 400
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 46/252 (18%)
Query: 52 MIDGYAKVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMN 107
M+D Y K+ ++ A +FD++P+R LW+VLI+G + G +AL++F+ M L N
Sbjct: 174 MVDVYVKLEEVKLALKVFDESPQRFHEGSTLLWNVLINGCCKVGDMRKALELFEDMPLRN 233
Query: 108 VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRA 167
A W +LI+ K G++++A
Sbjct: 234 T----------------------ASW------------------NSLINGFFKIGDLEQA 253
Query: 168 NKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHG 227
+ F+ MP +D+ S+ +M+ G S +G E+A+ +F++ML+E + P++ L+AC+
Sbjct: 254 IEHFDRMPVKDVVSWTTMVNGFSQNGDHEKALSVFSRMLDEDVKPNDFTIVSALSACAKI 313
Query: 228 RLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGA 287
+E G + +K + A +VD+ ++ G + A ++ K E W
Sbjct: 314 GALEAGLRIHKYLKDNGFRLNRAVGNA-LVDMHAKCGNINSASQVFKEAK-EKDIITWSV 371
Query: 288 LLGACKFYGEVE 299
++ +G E
Sbjct: 372 MIWGWAIHGHFE 383
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 39/146 (26%)
Query: 7 FVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV--SFTV------------- 51
F +MP +++ SW MV G + GD A VF M + DV FT+
Sbjct: 257 FDRMPVKDVVSWTTMVNGFSQNGDHEKALSVFSRMLDEDVKPNDFTIVSALSACAKIGAL 316
Query: 52 ------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGY 87
++D +AK G+I SA +F +A ++D WSV+I G+
Sbjct: 317 EAGLRIHKYLKDNGFRLNRAVGNALVDMHAKCGNINSASQVFKEAKEKDIITWSVMIWGW 376
Query: 88 AQNGLPNEALKIFQGMELMNVKPDEY 113
A +G EA++ F+ M ++PDE+
Sbjct: 377 AIHGHFEEAIQCFKQMMYAGIQPDEH 402
>29820.m001036 pentatricopeptide repeat-containing protein, putative
Length = 461
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 147/280 (52%), Gaps = 42/280 (15%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLV---------------------------------- 26
D+A ++ +PE N+ SW A++ G +
Sbjct: 166 DDALKMLDLIPESNIVSWTAIISGYIGVGKYREAIDLFRRMLETGLRPDSFTIVQVLSAC 225
Query: 27 -KGGDLINA----RKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ GDL N R + +++ R+V T ++D YAK G++ AR LFD +RD WS
Sbjct: 226 IQIGDLANGEWIDRYITENVMARNVFVTTSLVDLYAKHGNMEKARCLFDGMAERDIVSWS 285
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I GYA NGLP +AL +F M +KPD Y MV + AC+++G L+L W + ++
Sbjct: 286 AMIQGYASNGLPKDALDLFFKMLNAGLKPDHYAMVGFLCACARLGALELGDWGSNLMDRT 345
Query: 142 SIDIGQTHVV-AALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
+ HV+ ALIDM AKCG+M +A ++F+ + +D + + I GL+++G+ + A G
Sbjct: 346 --EFFTNHVLGTALIDMYAKCGSMAKAWEVFKGIKGKDRAVWNAAISGLAMNGHEKAAFG 403
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
LF +M G+ PD F +L C+H LV+EG+ YF +M
Sbjct: 404 LFGQMERFGIQPDGNTFVGLLCGCTHAGLVDEGRKYFHSM 443
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 146/275 (53%), Gaps = 5/275 (1%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T ++ YAK G I A + D P+ + W+ +ISGY G EA+ +F+ M ++
Sbjct: 153 TSLVSLYAKCGSIDDALKMLDLIPESNIVSWTAIISGYIGVGKYREAIDLFRRMLETGLR 212
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
PD + +V ++SAC Q+G+L +W+D Y+++ ++ V +L+D+ AK GNM++A
Sbjct: 213 PDSFTIVQVLSACIQIGDLANGEWIDRYITE-NVMARNVFVTTSLVDLYAKHGNMEKARC 271
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
LF+ M +RD+ S+ +MIQG + +G + A+ LF KMLN GL PD+ A L AC+
Sbjct: 272 LFDGMAERDIVSWSAMIQGYASNGLPKDALDLFFKMLNAGLKPDHYAMVGFLCACARLGA 331
Query: 230 VEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
+E G + + + + ++D+ ++ G + +A+E+ K + + A W A +
Sbjct: 332 LELGD-WGSNLMDRTEFFTNHVLGTALIDMYAKCGSMAKAWEVFKGIKGKDRA-VWNAAI 389
Query: 290 GACKFYG--EVELGEIVANRLFELEPENSSPYVLL 322
G + G F ++P+ ++ LL
Sbjct: 390 SGLAMNGHEKAAFGLFGQMERFGIQPDGNTFVGLL 424
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 111/229 (48%), Gaps = 3/229 (1%)
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
D R +F++ + D L++ +I G + E+++ + M P+ + ++
Sbjct: 63 DTTYTRLIFNQIKEPDVVLYNTMIRGLVSSDCFTESIEFYYSMRKKGFLPNNFTFPFVIK 122
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
AC+++ + L + + + D V +L+ + AKCG++D A K+ + +P+ ++
Sbjct: 123 ACARLLDFQLGIMMHTLVVKLGFDC-NLFVNTSLVSLYAKCGSIDDALKMLDLIPESNIV 181
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
S+ ++I G G +A+ LF +ML GL PD+ +L+AC + G+ + +
Sbjct: 182 SWTAIISGYIGVGKYREAIDLFRRMLETGLRPDSFTIVQVLSACIQIGDLANGE-WIDRY 240
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
++ M + +VDL ++ G +++A L M E +W A++
Sbjct: 241 ITENVMARNVFVTTSLVDLYAKHGNMEKARCLFDGMA-ERDIVSWSAMI 288
>29482.m000172 pentatricopeptide repeat-containing protein, putative
Length = 575
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 150/279 (53%), Gaps = 40/279 (14%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDD-------------------- 40
D A +F + ++L S+NAM+ GL G+ ++ ++F++
Sbjct: 269 DTASILFTDIGRKDLISYNAMISGLTFNGETESSVRLFEEWLDSGEKVNSSSIVGLIPVY 328
Query: 41 -----MP----------ERDVVSF----TVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+P + +VS T + Y+++ ++ +AR LFD++ ++ W+
Sbjct: 329 CPFGYLPLTNCIHGFGVKSGIVSHSSVATALTTVYSRLNEMEAARQLFDESSEKTLASWN 388
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I+GY QNG +A+ +FQ M++ N+ P+ + S++SAC+Q+G L L KW+ +
Sbjct: 389 AMIAGYTQNGATEKAISLFQEMQMYNISPNPVTVTSILSACAQLGALTLGKWIHGLVKFK 448
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
S + +V ALIDM AKCG++ A +LF+ MP+++ ++ ++I G +HG ++A+ L
Sbjct: 449 SFEY-NVYVSTALIDMYAKCGSILEARRLFDSMPEKNEVTWNAIISGYGLHGLGQEALKL 507
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
F +MLN G+ P F +L ACSH LV EG F +M
Sbjct: 508 FYEMLNCGIQPTRVTFLSVLYACSHAGLVREGDEIFHSM 546
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 166/378 (43%), Gaps = 54/378 (14%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM-----PERDVVSF------ 49
D A +VF ++PER+ +N M+ GLV+ ++ ++F M P+ D +
Sbjct: 167 DIALKVFDKLPERDTILYNTMISGLVRVCCYEDSIRLFKYMISGNGPQFDSTTVLAVLPA 226
Query: 50 -----------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLW 80
T +I Y+K GD+ +A LF ++D +
Sbjct: 227 LAELQELRLGTEIQCLAIKLGFLSHISVVTGLISLYSKCGDVDTASILFTDIGRKDLISY 286
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ +ISG NG ++++F+ K + +V L+ G L L + + +
Sbjct: 287 NAMISGLTFNGETESSVRLFEEWLDSGEKVNSSSIVGLIPVYCPFGYLPLTNCIHGFGVK 346
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
S I + + V AL + ++ M+ A +LF+E ++ L S+ +MI G + +G E+A+
Sbjct: 347 SGI-VSHSSVATALTTVYSRLNEMEAARQLFDESSEKTLASWNAMIAGYTQNGATEKAIS 405
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--HYFETMKS-KYSMVPSPEHYACMV 257
LF +M + P+ T IL+AC+ + GK H KS +Y++ S ++
Sbjct: 406 LFQEMQMYNISPNPVTVTSILSACAQLGALTLGKWIHGLVKFKSFEYNVYVS----TALI 461
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSS 317
D+ ++ G + EA L SMP E + W A++ YG LG+ +E+
Sbjct: 462 DMYAKCGSILEARRLFDSMP-EKNEVTWNAIISG---YGLHGLGQEALKLFYEMLNCGIQ 517
Query: 318 P--YVLLSSIYAAADQWL 333
P LS +YA + L
Sbjct: 518 PTRVTFLSVLYACSHAGL 535
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 162/348 (46%), Gaps = 47/348 (13%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
DN FV RN G K G ++ R + D + D+ + ++D Y K+
Sbjct: 114 DNFTYAFVVSAARNF--------GDAKIGFSLHGRVIVDGL-SSDLFVGSALVDMYFKLS 164
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN-VKPDEYIMVSLM 119
A +FDK P+RD L++ +ISG + +++++F+ M N + D +++++
Sbjct: 165 REDIALKVFDKLPERDTILYNTMISGLVRVCCYEDSIRLFKYMISGNGPQFDSTTVLAVL 224
Query: 120 SACSQVGNLDLAKWVDCYLSQSSIDIG---QTHVVAALIDMNAKCGNMDRANKLFEEMPK 176
A +++ L L + C +I +G VV LI + +KCG++D A+ LF ++ +
Sbjct: 225 PALAELQELRLGTEIQCL----AIKLGFLSHISVVTGLISLYSKCGDVDTASILFTDIGR 280
Query: 177 RDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE----------GLIPDNAAFTVI-LTACS 225
+DL SY +MI GL+ +G E +V LF + L+ GLIP F + LT C
Sbjct: 281 KDLISYNAMISGLTFNGETESSVRLFEEWLDSGEKVNSSSIVGLIPVYCPFGYLPLTNCI 340
Query: 226 HGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAW 285
HG V+ G +V + + SR +++ A +L ++ AS W
Sbjct: 341 HGFGVKSG------------IVSHSSVATALTTVYSRLNEMEAARQLFDESSEKTLAS-W 387
Query: 286 GALLGACKFYGEVELGEIVANRLF-ELEPENSSPY-VLLSSIYAAADQ 331
A++ G E A LF E++ N SP V ++SI +A Q
Sbjct: 388 NAMIAGYTQNGATE----KAISLFQEMQMYNISPNPVTVTSILSACAQ 431
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 127/291 (43%), Gaps = 14/291 (4%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
+ D+ T + + A ALF PK D FL++VLI G++ N P A+ +F
Sbjct: 45 QNDIAVATKLTHKLFNFNATSHASALFFTIPKPDLFLFNVLIKGFSNNNSPLSAISLFTH 104
Query: 103 M-ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC 161
+ + ++ PD + ++SA G+ + + + + V +AL+DM K
Sbjct: 105 LRKSTDLYPDNFTYAFVVSAARNFGDAKIGFSLHGRVIVDGLS-SDLFVGSALVDMYFKL 163
Query: 162 GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLN-EGLIPDNAAFTVI 220
D A K+F+++P+RD Y +MI GL E ++ LF M++ G D+ +
Sbjct: 164 SREDIALKVFDKLPERDTILYNTMISGLVRVCCYEDSIRLFKYMISGNGPQFDSTTVLAV 223
Query: 221 LTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVES 280
L A + + + G + + K + ++ L S+ G + A L + +
Sbjct: 224 LPALAELQELRLGTE-IQCLAIKLGFLSHISVVTGLISLYSKCGDVDTASILFTDIGRKD 282
Query: 281 HASAWGALLGACKFYGEVELGEIVANRLFEL-----EPENSSPYVLLSSIY 326
S + A++ F GE E + RLFE E NSS V L +Y
Sbjct: 283 LIS-YNAMISGLTFNGETE----SSVRLFEEWLDSGEKVNSSSIVGLIPVY 328
>30147.m014156 pentatricopeptide repeat-containing protein, putative
Length = 554
Score = 158 bits (399), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 128/211 (60%), Gaps = 10/211 (4%)
Query: 33 NARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP-KRDAFLWSVLISGYAQNG 91
N+RK+FD+M RDVVS+ MI GY + GD+ + LF K R+ W+ +I+G+ Q G
Sbjct: 161 NSRKLFDEMSNRDVVSWNSMIIGYLRSGDLDQSLNLFRKMKINRNVITWNSIITGFVQGG 220
Query: 92 LPNEALKIFQGMELMN--------VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
P EAL+ F M+ + V+PD+ + S++SAC+ +G +D KWV YL +S +
Sbjct: 221 RPKEALEFFHEMQCLRDDDGINNKVRPDKITIASVLSACAHLGAIDHGKWVHSYLRRSGL 280
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+ + AL+DM KCG + RA ++F EM ++D ++ +MI +++G+ ++A +FN
Sbjct: 281 ECDMV-IGTALVDMYGKCGCLQRAYEVFREMSEKDTLAWTAMISVFALNGFGKEAFDMFN 339
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGK 234
+M G+ P+ F +L+AC+H LVE G+
Sbjct: 340 EMEAGGVKPNLVTFVGLLSACAHSGLVETGR 370
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 126/324 (38%), Gaps = 72/324 (22%)
Query: 46 VVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPN-------EALK 98
++S + + G +A A +F K + ++++I YA + +AL
Sbjct: 35 LISRLLFFAALSDSGSLAYAADIFHYIKKPNLPFYNIMIRAYASKSNVDYDDARLCQALI 94
Query: 99 IFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG---QTHVVAALI 155
+++ M ++ PD L+ C++ ++A + + +I +G V +LI
Sbjct: 95 LYKQMLCNDISPDCLTFPFLLKECTR----NVAIYGGRGIHGHAIKLGLYSDLFVQNSLI 150
Query: 156 DMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM---------- 205
+ C + + KLF+EM RD+ S+ SMI G G +Q++ LF KM
Sbjct: 151 SFYSACEFVSNSRKLFDEMSNRDVVSWNSMIIGYLRSGDLDQSLNLFRKMKINRNVITWN 210
Query: 206 ------------------------------LNEGLIPDNAAFTVILTACSHGRLVEEGK- 234
+N + PD +L+AC+H ++ GK
Sbjct: 211 SIITGFVQGGRPKEALEFFHEMQCLRDDDGINNKVRPDKITIASVLSACAHLGAIDHGKW 270
Query: 235 --HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLG-- 290
Y + MV +VD+ + G L+ AYE+ + M E AW A++
Sbjct: 271 VHSYLRRSGLECDMVIG----TALVDMYGKCGCLQRAYEVFREMS-EKDTLAWTAMISVF 325
Query: 291 --------ACKFYGEVELGEIVAN 306
A + E+E G + N
Sbjct: 326 ALNGFGKEAFDMFNEMEAGGVKPN 349
>29983.m003289 pentatricopeptide repeat-containing protein, putative
Length = 824
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 134/227 (59%), Gaps = 3/227 (1%)
Query: 16 TSWNAMVGGLVKGGDLINARKVFDDMPE-RDVVSFTVMIDGYAKVGDIASARALFDKAPK 74
T+ NAM+ K ++ A KVF + + R++V+F MI GY G A +F+K P
Sbjct: 426 TTRNAMLDTYAKCSNVEYAFKVFQTLSDNRNLVTFNSMISGYVNCGLYDDAYMIFEKMPA 485
Query: 75 RDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV 134
D W++++ G A+N P++A +F+ ++ +KPD ++SL+ +C+Q ++ L K
Sbjct: 486 SDLTTWNLMVRGCAENDCPDQAFSLFRELQARGMKPDAVTIISLLPSCAQTASVHLMKQC 545
Query: 135 DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGY 194
Y+ ++ D H+ AL+D+ AKCG++ A KLF P RDL + +M+ G ++HG
Sbjct: 546 HGYVIRACFD--DAHLEGALLDLYAKCGDLGYAFKLFHSNPGRDLVVFTAMVGGYAMHGM 603
Query: 195 AEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
E+A+ +F+ ML+ G+ PD+ T +L+AC H LV+EG F +++
Sbjct: 604 GEEALRIFSDMLDLGIKPDHIVITAVLSACCHAGLVDEGLKIFHSIE 650
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 116/235 (49%), Gaps = 3/235 (1%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM- 103
DV ++ + VG + A LF + RD W+ +ISG+A NG +++L++FQ +
Sbjct: 217 DVSVCNALLSFHLMVGRVKEAELLFRRMELRDLISWNAIISGFASNGEWSKSLELFQELL 276
Query: 104 ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGN 163
L + +PD +VS++ AC+Q+ NL + + Y+ + T V AL+ AKC N
Sbjct: 277 YLESNEPDSVTLVSILPACAQLQNLKAGREIHSYVLRHPYLYQDTSVGNALVSFYAKCNN 336
Query: 164 MDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
+ A F +P RDL S+ SM+ +I G Q L + M EG+ PD+ IL
Sbjct: 337 LVAAYHTFLMIPSRDLISWNSMLDAFAIGGRNAQFFKLLHWMHTEGIRPDSITILTILHF 396
Query: 224 CSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
C++ V++ K H + P M+D ++ ++ A+++ +++
Sbjct: 397 CANVLKVDKVKETHCYSLRCGLLQSDFEPTTRNAMLDTYAKCSNVEYAFKVFQTL 451
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 38/167 (22%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFT------ 50
D+A +F +MP +LT+WN MV G + A +F ++ R D V+
Sbjct: 474 DDAYMIFEKMPASDLTTWNLMVRGCAENDCPDQAFSLFRELQARGMKPDAVTIISLLPSC 533
Query: 51 ----------------------------VMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
++D YAK GD+ A LF P RD +++
Sbjct: 534 AQTASVHLMKQCHGYVIRACFDDAHLEGALLDLYAKCGDLGYAFKLFHSNPGRDLVVFTA 593
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLD 129
++ GYA +G+ EAL+IF M + +KPD ++ +++SAC G +D
Sbjct: 594 MVGGYAMHGMGEEALRIFSDMLDLGIKPDHIVITAVLSACCHAGLVD 640
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 113/246 (45%), Gaps = 8/246 (3%)
Query: 52 MIDGYAKVGDIA-SARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKP 110
++ YAK G ++ A A F +D W+ +I+G+++N + + AL++F M +KP
Sbjct: 118 LVSMYAKCGLVSYDAYAAFQSIYHKDVVSWNAIIAGFSENKMVDSALRLFFFMLKTQIKP 177
Query: 111 DEYIMVSLMSACSQVGNLDLA----KWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDR 166
+ + +++ + + D A + + CY+ + + + V AL+ + G +
Sbjct: 178 NHATIATVLPLLASLAT-DTAYLFGREIHCYILRHNESLADVSVCNALLSFHLMVGRVKE 236
Query: 167 ANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLN-EGLIPDNAAFTVILTACS 225
A LF M RDL S+ ++I G + +G +++ LF ++L E PD+ IL AC+
Sbjct: 237 AELLFRRMELRDLISWNAIISGFASNGEWSKSLELFQELLYLESNEPDSVTLVSILPACA 296
Query: 226 HGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAW 285
+ ++ G+ + + +V ++ L AY +P S W
Sbjct: 297 QLQNLKAGREIHSYVLRHPYLYQDTSVGNALVSFYAKCNNLVAAYHTFLMIPSRDLIS-W 355
Query: 286 GALLGA 291
++L A
Sbjct: 356 NSMLDA 361
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 127/290 (43%), Gaps = 23/290 (7%)
Query: 56 YAKVGDIASARALFDKAPK--RDAFLWSVLISGYAQNGLPN-EALKIFQGMELMN-VKPD 111
YAK G + + LF + D W++L+SG+A + + + + F M + N VKP
Sbjct: 17 YAKCGAFSDSNKLFGEISNCSHDPIFWNILLSGFAASPIHDAQTFSFFNRMRVANQVKPT 76
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDR-ANKL 170
++ C+++ ++ + K CY+ ++ ++ T V AL+ M AKCG + A
Sbjct: 77 SVTAAVILPVCARMRDIYVGKSFHCYMIKTGMET-HTLVGNALVSMYAKCGLVSYDAYAA 135
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVIL--------- 221
F+ + +D+ S+ ++I G S + + A+ LF ML + P++A +L
Sbjct: 136 FQSIYHKDVVSWNAIIAGFSENKMVDSALRLFFFMLKTQIKPNHATIATVLPLLASLATD 195
Query: 222 TACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESH 281
TA GR + + S+ + + MV G++KEA L + M +
Sbjct: 196 TAYLFGREIHCYILRHNESLADVSVCNALLSFHLMV------GRVKEAELLFRRMELRDL 249
Query: 282 ASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQ 331
S W A++ GE + L LE N V L SI A Q
Sbjct: 250 IS-WNAIISGFASNGEWSKSLELFQELLYLE-SNEPDSVTLVSILPACAQ 297
>29844.m003191 pentatricopeptide repeat-containing protein, putative
Length = 456
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 152/287 (52%), Gaps = 41/287 (14%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM-------PERDVVS------- 48
A +V + P RNL +W AM+ G V+ G ++ K F M E VVS
Sbjct: 149 AHQVLDESPHRNLVTWTAMIDGYVRNGFPVDGIKCFKKMRSMGVKIDEITVVSVLCAAGM 208
Query: 49 ------------FTV--------------MIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
F V ++D Y K G A LF++ P ++ WS
Sbjct: 209 AGDVWFGRWVHGFYVESGRVKWDVYIGSSLLDMYCKCGYCDDACKLFNEMPVKNIVCWSA 268
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
LI+GY Q +AL +FQ M L +V+P++ + S+++A +Q+G LD +WV Y+ ++S
Sbjct: 269 LIAGYVQCNRFKDALLLFQDMLLTDVRPNQCTLSSVLTASAQLGALDRGRWVHDYIDRNS 328
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+++ + ALIDM AKCG + A +F ++ ++++++ +MI GL++HG A ++ LF
Sbjct: 329 LEMNSI-LGTALIDMYAKCGCISEAYVVFNKLHIKNVYTWTAMINGLAMHGDALSSLNLF 387
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPS 249
+ M++ G+ P+ F IL AC+HG LV G+ F+ MK Y++ P+
Sbjct: 388 SHMISNGVQPNGVTFVGILNACAHGGLVHIGRGLFDMMKHMYNLEPN 434
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 125/246 (50%), Gaps = 2/246 (0%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I ++ G + A + D++P R+ W+ +I GY +NG P + +K F+ M M VK D
Sbjct: 136 LITAFSNCGCVQFAHQVLDESPHRNLVTWTAMIDGYVRNGFPVDGIKCFKKMRSMGVKID 195
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
E +VS++ A G++ +WV + +S ++ ++L+DM KCG D A KLF
Sbjct: 196 EITVVSVLCAAGMAGDVWFGRWVHGFYVESGRVKWDVYIGSSLLDMYCKCGYCDDACKLF 255
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
EMP +++ + ++I G + A+ LF ML + P+ + +LTA + ++
Sbjct: 256 NEMPVKNIVCWSALIAGYVQCNRFKDALLLFQDMLLTDVRPNQCTLSSVLTASAQLGALD 315
Query: 232 EGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
G+ + + S+ + ++D+ ++ G + EAY + + +++ W A++
Sbjct: 316 RGR-WVHDYIDRNSLEMNSILGTALIDMYAKCGCISEAYVVFNKLHIKN-VYTWTAMING 373
Query: 292 CKFYGE 297
+G+
Sbjct: 374 LAMHGD 379
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 15/219 (6%)
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY- 137
LW+ +ISG++ + P ++L + M + + PD L+ + Q+ N K D Y
Sbjct: 63 LWNTIISGFSISFQPQKSLLYYTIMRRIGILPDNQTYNLLLKSYPQLEN---RKPFDIYA 119
Query: 138 -LSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAE 196
+ + +D + V +LI + CG + A+++ +E P R+L ++ +MI G +G+
Sbjct: 120 HIVKYGLDFDNS-VTNSLITAFSNCGCVQFAHQVLDESPHRNLVTWTAMIDGYVRNGFPV 178
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK----HYFETMKSKYSMVPSPEH 252
+ F KM + G+ D +L A V G+ Y E+ + K+ +
Sbjct: 179 DGIKCFKKMRSMGVKIDEITVVSVLCAAGMAGDVWFGRWVHGFYVESGRVKWDVYIGSS- 237
Query: 253 YACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
++D+ + G +A +L MPV++ W AL+
Sbjct: 238 ---LLDMYCKCGYCDDACKLFNEMPVKN-IVCWSALIAG 272
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 89/221 (40%), Gaps = 59/221 (26%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV-------------- 46
D+A ++F +MP +N+ W+A++ G V+ +A +F DM DV
Sbjct: 249 DDACKLFNEMPVKNIVCWSALIAGYVQCNRFKDALLLFQDMLLTDVRPNQCTLSSVLTAS 308
Query: 47 -------------------------VSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ T +ID YAK G I+ A +F+K ++ + W+
Sbjct: 309 AQLGALDRGRWVHDYIDRNSLEMNSILGTALIDMYAKCGCISEAYVVFNKLHIKNVYTWT 368
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I+G A +G +L +F M V+P+ V +++AC+
Sbjct: 369 AMINGLAMHGDALSSLNLFSHMISNGVQPNGVTFVGILNACAHG---------------- 412
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSY 182
G H+ L DM N++ KL + +P+ ++
Sbjct: 413 ----GLVHIGRGLFDMMKHMYNLEPNLKLADHLPETKSLTF 449
>29992.m001416 pentatricopeptide repeat-containing protein, putative
Length = 599
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 148/264 (56%), Gaps = 33/264 (12%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLV------------------------------KGGD 30
DNA+ +F +MPE NL S+N+++ G + K G
Sbjct: 90 DNARDLFDKMPEPNLISYNSLISGSLDLLRQVHGAAILIGLEFNVIVYNALIDSYGKCGQ 149
Query: 31 LINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQN 90
+ +F M ERDVVS+T M+D YA+ + A LF + P ++ W+ LI+G+A+N
Sbjct: 150 HNTSYCIFSRMFERDVVSWTSMVDAYARASRMDDAFRLFMEMPVKNTVSWTSLIAGFAKN 209
Query: 91 GLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS--IDIGQT 148
G +AL++F M+ NV P + V+++ AC+ + ++ K + ++ +SS D+
Sbjct: 210 GHSYKALELFLQMQEENVLPSAFTFVTVLGACADLALIERGKQIHGHIIRSSGRTDLFNM 269
Query: 149 HVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE 208
+V ALIDM KCG+M + LFE M ++D+ S+ S+I GL+ +G+AE+++ LF KM+
Sbjct: 270 YVYNALIDMYCKCGDMKSSKSLFEGMSEKDIVSWNSLITGLAQNGHAEESLDLFRKMVEG 329
Query: 209 GLIPDNAAFTVILTACSH-GRLVE 231
+P++ F+ +L+ACSH GR E
Sbjct: 330 NRLPNHVTFSGVLSACSHTGRKKE 353
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 137/271 (50%), Gaps = 17/271 (6%)
Query: 33 NARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGL 92
+A+KVFDD P +++ S+ MI GYA+VG +AR LFDK P+ + ++ LISG
Sbjct: 60 SAQKVFDDNPIKNIHSWNTMIGGYARVGLFDNARDLFDKMPEPNLISYNSLISGSLDLLR 119
Query: 93 PNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA 152
I G+E NV + +L+ + + G + + C S+ + + VV+
Sbjct: 120 QVHGAAILIGLEF-NV----IVYNALIDSYGKCGQHNTSY---CIFSR----MFERDVVS 167
Query: 153 --ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGL 210
+++D A+ MD A +LF EMP ++ S+ S+I G + +G++ +A+ LF +M E +
Sbjct: 168 WTSMVDAYARASRMDDAFRLFMEMPVKNTVSWTSLIAGFAKNGHSYKALELFLQMQEENV 227
Query: 211 IPDNAAFTVILTACSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKE 268
+P F +L AC+ L+E GK H S + + + Y ++D+ + G +K
Sbjct: 228 LPSAFTFVTVLGACADLALIERGKQIHGHIIRSSGRTDLFNMYVYNALIDMYCKCGDMKS 287
Query: 269 AYELLKSMPVESHASAWGALLGACKFYGEVE 299
+ L + M E +W +L+ G E
Sbjct: 288 SKSLFEGMS-EKDIVSWNSLITGLAQNGHAE 317
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 112/257 (43%), Gaps = 46/257 (17%)
Query: 106 MNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMD 165
M++ PD +SL S C NL L + +L ++++ I ++D+ +K +D
Sbjct: 1 MDLSPDVVQWISLFSKCISTRNLKLGLTLHSFLIKTAL-ICSPFFSNRVMDLYSKFNVID 59
Query: 166 RANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNA---------- 215
A K+F++ P +++ S+ +MI G + G + A LF+KM LI N+
Sbjct: 60 SAQKVFDDNPIKNIHSWNTMIGGYARVGLFDNARDLFDKMPEPNLISYNSLISGSLDLLR 119
Query: 216 -----------AFTVILTAC---SHGRLVEEGKHY--FETMKSKYSMVPSPEHYACMVDL 259
F VI+ S+G+ + Y F M + + + MVD
Sbjct: 120 QVHGAAILIGLEFNVIVYNALIDSYGKCGQHNTSYCIFSRMFERDVV-----SWTSMVDA 174
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALLGAC----KFYGEVELGEIVANRLFELEPEN 315
+R+ ++ +A+ L MPV++ S W +L+ Y +EL +++ EN
Sbjct: 175 YARASRMDDAFRLFMEMPVKNTVS-WTSLIAGFAKNGHSYKALEL-------FLQMQEEN 226
Query: 316 SSP--YVLLSSIYAAAD 330
P + ++ + A AD
Sbjct: 227 VLPSAFTFVTVLGACAD 243
>30147.m014385 pentatricopeptide repeat-containing protein, putative
Length = 318
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 150/268 (55%), Gaps = 16/268 (5%)
Query: 7 FVQMPERNLTSWNAMVG--GLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIAS 64
FV+ E L + G G V G I+A V + DV+ + +ID YAK + +
Sbjct: 40 FVRFDEVTLVNALTACGRTGFVNLGKKIHALIVVNGFV-LDVILGSCLIDMYAKCAQMDN 98
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
AR +FDK P R+ W+ LI GYA+ + E L++F+ +++ V D ++ ++SAC
Sbjct: 99 AREVFDKIPVRNLVCWTSLIVGYARLNMYKEGLELFRELQIAGVIADAALVACVVSACGH 158
Query: 125 VGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCS 184
+G L +WV Y ++ ID+ + V ALIDM +KCG++++A+++F M K+DLFS+ +
Sbjct: 159 MGALAQGRWVHTYCERNGIDMNLS-VRNALIDMYSKCGDIEKAHQIFNGMVKKDLFSWTA 217
Query: 185 MIQGLSIHGYAEQAVGLFNKMLN-EGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSK 243
MI G +++GY+++A+ LF ++ + P+ F +L+ACSHG V++G YF+ M
Sbjct: 218 MISGFAMNGYSDEALELFAQVETCNDVKPNEVTFLGVLSACSHGGFVDKGFQYFKAMSQI 277
Query: 244 YSMVPSPEHYACMVDLLSRSGQLKEAYE 271
Y + P + GQ+ YE
Sbjct: 278 YHITPQKSY-----------GQMDIVYE 294
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 118/218 (54%), Gaps = 8/218 (3%)
Query: 75 RDAFLWSVLISGYAQNGLPNEALKIFQGMELMN---VKPDEYIMVSLMSACSQVGNLDLA 131
RD W+ +ISGY Q +ALK+F EL+N V+ DE +V+ ++AC + G ++L
Sbjct: 7 RDVVSWNSMISGYLQCERNGDALKVFG--ELLNDNFVRFDEVTLVNALTACGRTGFVNLG 64
Query: 132 KWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSI 191
K + + + + + + LIDM AKC MD A ++F+++P R+L + S+I G +
Sbjct: 65 KKIHALIVVNGF-VLDVILGSCLIDMYAKCAQMDNAREVFDKIPVRNLVCWTSLIVGYAR 123
Query: 192 HGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPE 251
++ + LF ++ G+I D A +++AC H + +G+ + T + + +
Sbjct: 124 LNMYKEGLELFRELQIAGVIADAALVACVVSACGHMGALAQGR-WVHTYCERNGIDMNLS 182
Query: 252 HYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
++D+ S+ G +++A+++ M V+ +W A++
Sbjct: 183 VRNALIDMYSKCGDIEKAHQIFNGM-VKKDLFSWTAMI 219
>30147.m014093 pentatricopeptide repeat-containing protein, putative
Length = 434
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 152/263 (57%), Gaps = 3/263 (1%)
Query: 27 KGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
K G+L +ARK+FD + +D +S+ +I GY+K GD+ +AR LFD +R W+ +IS
Sbjct: 143 KIGELGSARKIFDGILVKDPISYNCLITGYSKAGDVIAARRLFDSMTERTVVSWNAMISC 202
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG 146
YA NG NE LK F+ M+ ++ P+E +V+L+S C+++G+L++ + Y+ +++ +
Sbjct: 203 YAHNGDLNEGLKTFERMQAEDISPNEITLVTLLSICAKLGDLEMGLRIKKYIEDNNLCVN 262
Query: 147 QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
V A+++M KCG +D A K F+ M +RD+ ++ +MI G + +G + +A+ LF M
Sbjct: 263 MI-VSTAILEMYVKCGAVDDARKEFDRMGQRDIVAWSAMIAGYAQNGRSNEALELFECMR 321
Query: 207 NEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQL 266
E + P++ +L+AC VE G + ++S+ + + + +V + S+ G +
Sbjct: 322 REKVKPNDVTLVSVLSACVQLGSVEMGNYIGSYVESQ-DLASNVYVASALVGMYSKCGNI 380
Query: 267 KEAYELLKSMPVESHASAWGALL 289
+A E+ P + W +++
Sbjct: 381 SKAREVFGKTP-QKDIVTWNSMI 402
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 129/242 (53%), Gaps = 40/242 (16%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV---------------- 46
A+R+F M ER + SWNAM+ GDL K F+ M D+
Sbjct: 181 ARRLFDSMTERTVVSWNAMISCYAHNGDLNEGLKTFERMQAEDISPNEITLVTLLSICAK 240
Query: 47 -----------------------VSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
+ T +++ Y K G + AR FD+ +RD WS +
Sbjct: 241 LGDLEMGLRIKKYIEDNNLCVNMIVSTAILEMYVKCGAVDDARKEFDRMGQRDIVAWSAM 300
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I+GYAQNG NEAL++F+ M VKP++ +VS++SAC Q+G++++ ++ Y+ +
Sbjct: 301 IAGYAQNGRSNEALELFECMRREKVKPNDVTLVSVLSACVQLGSVEMGNYIGSYVESQDL 360
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+V +AL+ M +KCGN+ +A ++F + P++D+ ++ SMI GL+++G+A+ A+ L+
Sbjct: 361 -ASNVYVASALVGMYSKCGNISKAREVFGKTPQKDIVTWNSMIVGLAVNGFAKDAIALYR 419
Query: 204 KM 205
M
Sbjct: 420 NM 421
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 6/225 (2%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
TV++ + DI AR LFD+ P+ L++ LIS Y++ L +ALK F M + +
Sbjct: 34 TVLVRKLLNLSDIDYARQLFDQVPQPGQILYNSLISTYSKLSLHKDALKTFFSMHHSDTR 93
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
+ ++ ACS + +D+ K V + ID +V +L+D AK G + A K
Sbjct: 94 LSCFTGPPVIKACSSLLAIDVGKQVHSLIVICGIDC-NVYVQTSLMDFYAKIGELGSARK 152
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
+F+ + +D SY +I G S G A LF+ M ++ NA +++ +H
Sbjct: 153 IFDGILVKDPISYNCLITGYSKAGDVIAARRLFDSMTERTVVSWNA----MISCYAHNGD 208
Query: 230 VEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLK 274
+ EG FE M+++ + P+ ++ + ++ G L+ + K
Sbjct: 209 LNEGLKTFERMQAE-DISPNEITLVTLLSICAKLGDLEMGLRIKK 252
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 39/143 (27%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER-----DVVSFTV---- 51
D+A++ F +M +R++ +W+AM+ G + G A ++F+ M DV +V
Sbjct: 280 DDARKEFDRMGQRDIVAWSAMIAGYAQNGRSNEALELFECMRREKVKPNDVTLVSVLSAC 339
Query: 52 ------------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWS 81
++ Y+K G+I+ AR +F K P++D W+
Sbjct: 340 VQLGSVEMGNYIGSYVESQDLASNVYVASALVGMYSKCGNISKAREVFGKTPQKDIVTWN 399
Query: 82 VLISGYAQNGLPNEALKIFQGME 104
+I G A NG +A+ +++ M+
Sbjct: 400 SMIVGLAVNGFAKDAIALYRNMK 422
>30128.m008933 pentatricopeptide repeat-containing protein, putative
Length = 444
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 139/233 (59%), Gaps = 1/233 (0%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
NA++ ++ +A+K+F+ D +S+ MI GY K G+I A+ALFD +D
Sbjct: 198 NALIHMYSSCREIDSAQKLFNVGYSLDQISWNSMISGYLKCGEIEKAKALFDIMNDKDLV 257
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
WS +ISGYAQ+ E L +FQ M+L VKPDE +VS++SAC+ + LD KW+ YL
Sbjct: 258 SWSAMISGYAQHDRFAETLALFQEMQLDGVKPDETTLVSVVSACTHLAALDQGKWIHLYL 317
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
++ + I + LIDM K G ++ A ++F M ++ + ++ ++I GL+++G +
Sbjct: 318 RKNGLKINVI-LGTTLIDMYMKFGCVEDALEVFHGMKEKGVSTWNAVILGLALNGLVHMS 376
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPE 251
+ F++M + G++P+ F +L AC H LVEEG+ +F +M ++ + P+ +
Sbjct: 377 LDTFSEMKDCGVVPNEITFVAVLVACRHMGLVEEGRCHFSSMIQEHKIEPNRQ 429
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 141/304 (46%), Gaps = 41/304 (13%)
Query: 30 DLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQ 89
+L +ARKVFD+ P D+VS+ ++ G GD+ A LF + K+D WS LISGY Q
Sbjct: 80 NLGDARKVFDESPVLDLVSWNSILAGK---GDVTEAYRLFSEMCKKDLVSWSALISGYEQ 136
Query: 90 NGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDC------------- 136
NG EAL F M + DE ++VS++SAC+ + + K V
Sbjct: 137 NGRYEEALVTFGKMNAYGIMVDEVVVVSVLSACAHLFAVKTGKLVHSLAVKIGIESYVNL 196
Query: 137 -------YLSQSSIDIGQTHVVA----------ALIDMNAKCGNMDRANKLFEEMPKRDL 179
Y S ID Q ++I KCG +++A LF+ M +DL
Sbjct: 197 QNALIHMYSSCREIDSAQKLFNVGYSLDQISWNSMISGYLKCGEIEKAKALFDIMNDKDL 256
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH---Y 236
S+ +MI G + H + + LF +M +G+ PD +++AC+H +++GK Y
Sbjct: 257 VSWSAMISGYAQHDRFAETLALFQEMQLDGVKPDETTLVSVVSACTHLAALDQGKWIHLY 316
Query: 237 FETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYG 296
K +++ ++D+ + G +++A E+ M E S W A++ G
Sbjct: 317 LRKNGLKINVILGTT----LIDMYMKFGCVEDALEVFHGMK-EKGVSTWNAVILGLALNG 371
Query: 297 EVEL 300
V +
Sbjct: 372 LVHM 375
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 31/181 (17%)
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACS-QVGNLDLAKWVDCYLSQS 141
++ + Q P + +++ M NV+PD + L+ +CS +V D K + C++ +
Sbjct: 1 MMRAFVQRNYPYYCMDMYKWMLQENVEPDNFTYPILLQSCSLRVAKFD-GKLIHCHVLKM 59
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-------------------------- 175
S + +V LI++ + C N+ A K+F+E P
Sbjct: 60 SFNF-DVYVQNTLINLYSVCQNLGDARKVFDESPVLDLVSWNSILAGKGDVTEAYRLFSE 118
Query: 176 --KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEG 233
K+DL S+ ++I G +G E+A+ F KM G++ D +L+AC+H V+ G
Sbjct: 119 MCKKDLVSWSALISGYEQNGRYEEALVTFGKMNAYGIMVDEVVVVSVLSACAHLFAVKTG 178
Query: 234 K 234
K
Sbjct: 179 K 179
>29851.m002415 pentatricopeptide repeat-containing protein, putative
Length = 386
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 131/228 (57%), Gaps = 8/228 (3%)
Query: 22 VGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+G +V G L+N + DV ++ YAK GD+ +AR +FDK +R W+
Sbjct: 129 LGKVVHGHVLVNGFGL-------DVYVQAALVACYAKSGDLGNARKVFDKMRERSVVSWN 181
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+ISGY QNG EA+++F+ M +PD V ++SAC+Q+G L + WV Y
Sbjct: 182 SIISGYEQNGFGREAIRLFKKMREEGFEPDSATFVIVLSACAQLGALSMGCWVHKYTIGH 241
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+D+ + +LI+M +CG + +A ++F+ M ++++ ++ +MI G +G+ QAV L
Sbjct: 242 GLDLNVV-LGTSLINMYTRCGTVTKAREVFDSMKEKNVVTWTAMISGYGTNGHGRQAVQL 300
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPS 249
F++M G P++ F +L+AC+H LV+EG F +M+ +Y + P+
Sbjct: 301 FDEMKRRGPCPNSVTFVAVLSACAHAGLVKEGWQVFVSMREEYHLKPA 348
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP 73
N+ +++ + G + AR+VFD M E++VV++T MI GY G A LFD+
Sbjct: 246 NVVLGTSLINMYTRCGTVTKAREVFDSMKEKNVVTWTAMISGYGTNGHGRQAVQLFDEMK 305
Query: 74 KR----DAFLWSVLISGYAQNGLPNEALKIFQGM-ELMNVKP 110
+R ++ + ++S A GL E ++F M E ++KP
Sbjct: 306 RRGPCPNSVTFVAVLSACAHAGLVKEGWQVFVSMREEYHLKP 347
>30128.m008954 pentatricopeptide repeat-containing protein, putative
Length = 544
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 135/235 (57%), Gaps = 6/235 (2%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
D A+++F MP++N +W AM+ G + G + A ++F+ MP + V + MI G+ + G
Sbjct: 220 DVARKLFEVMPDKNEVTWTAMLMGYTRSGRIKEAAELFEAMPMKPVPACNEMIIGFGQSG 279
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
++ A+ FD+ ++D WS +I Y + GL EAL +F+ M+ V+P+ ++S++S
Sbjct: 280 EVGKAKWTFDQMREKDDGTWSAMIKVYERKGLELEALDLFRLMQREGVRPNFPSIISILS 339
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
C + +LD + V L +S D +V + LI M KCG++ +A ++F+ +D
Sbjct: 340 VCGSLASLDYGRQVHTQLVRSQFDF-DVYVSSVLITMYIKCGDLVKAKRVFDRFSMKDTV 398
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
+ S+I G + HG E+A+ +F +ML+ G+ PD F +LTACS+ GKH
Sbjct: 399 MWNSIITGYAQHGLGEEALEVFFEMLSSGISPDEITFIGVLTACSYS-----GKH 448
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 157/309 (50%), Gaps = 21/309 (6%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A +F +MP+RN SWN ++ G VK G + AR+VFD MPER+VVS+T M+ GY + G I
Sbjct: 67 AHDLFNKMPDRNTVSWNGLISGYVKNGMINEAREVFDKMPERNVVSWTAMVRGYIQEGMI 126
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
A +LF + P+++ W+V++ G ++G NEA+K++ M L +V +++
Sbjct: 127 KQAESLFWEMPEKNVVSWTVMLGGLIEDGRVNEAIKLYDLMPLKDV----VARTNMIGGL 182
Query: 123 SQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSY 182
G L A+ + + + ++ + T +++ MN K +D A KLFE MP ++ ++
Sbjct: 183 CMEGRLSEAREIFDEMPKRNV-VAWTTMISGYA-MNNK---VDVARKLFEVMPDKNEVTW 237
Query: 183 CSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKS 242
+M+ G + G ++A LF M + P A +I+ G V + K F+ M+
Sbjct: 238 TAMLMGYTRSGRIKEAAELFEAM---PMKPVPACNEMIIGFGQSGE-VGKAKWTFDQMRE 293
Query: 243 KYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP---VESHASAWGALLGACKFYGEVE 299
K ++ M+ + R G EA +L + M V + + ++L C ++
Sbjct: 294 K-----DDGTWSAMIKVYERKGLELEALDLFRLMQREGVRPNFPSIISILSVCGSLASLD 348
Query: 300 LGEIVANRL 308
G V +L
Sbjct: 349 YGRQVHTQL 357
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 136/279 (48%), Gaps = 49/279 (17%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
+ A+++F ++P + + SWNA+V G + A +F+ MP+R+ VS+ +I GY K G
Sbjct: 34 NRARKIFDELPYKTIISWNAIVAGYFQNKQPREAHDLFNKMPDRNTVSWNGLISGYVKNG 93
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
I AR +FDK P+R+ W+ ++ GY Q G+ +A +F M NV
Sbjct: 94 MINEAREVFDKMPERNVVSWTAMVRGYIQEGMIKQAESLFWEMPEKNV------------ 141
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
+ T ++ LI+ G ++ A KL++ MP +D+
Sbjct: 142 ------------------------VSWTVMLGGLIE----DGRVNEAIKLYDLMPLKDVV 173
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
+ +MI GL + G +A +F++M ++ A+T +++ + V+ + FE M
Sbjct: 174 ARTNMIGGLCMEGRLSEAREIFDEMPKRNVV----AWTTMISGYAMNNKVDVARKLFEVM 229
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVE 279
K + + M+ +RSG++KEA EL ++MP++
Sbjct: 230 PDKNEVT-----WTAMLMGYTRSGRIKEAAELFEAMPMK 263
>29681.m001372 pentatricopeptide repeat-containing protein, putative
Length = 494
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 142/269 (52%), Gaps = 40/269 (14%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP---ERDVVSFTVMIDG---- 55
A+ +F M E++L SW ++GG V G++ A +F+ M D + F +I G
Sbjct: 202 ARTLFDMMHEKSLISWTTVIGGYVDFGNVREAFSLFNQMRISMRLDFIVFITLISGCARE 261
Query: 56 -------------------------------YAKVGDIASARALFDKAPKRDAFLWSVLI 84
Y+K GD+ SA+ FD A ++ +LW+ +I
Sbjct: 262 GNLLLASSVHSLLVKYGCDDKDPIDNLLVTMYSKCGDLISAQRAFDIAREKSLYLWTSMI 321
Query: 85 SGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
+ Y G P +AL++F + +KP+E + +++SAC+ +G+L + + ++ Y+ + +
Sbjct: 322 AAYTHLGYPVQALRLFNTLLGTAIKPNEATLATILSACADLGSLSMGEEIEEYILANGLH 381
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
V +LI M +CG++++A +FE + +DL ++ SMI G +IHG AE+A LF+K
Sbjct: 382 -SSVQVQTSLIHMFCRCGSLEKAKAVFERLATKDLAAWSSMINGYAIHGMAEEAFSLFHK 440
Query: 205 MLN-EGLIPDNAAFTVILTACSHGRLVEE 232
M EG+ PD +T IL ACSH L+E+
Sbjct: 441 MQTVEGIKPDAVIYTSILLACSHSGLIED 469
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 150/335 (44%), Gaps = 41/335 (12%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVK------GGDLINARKVFDDMPER----------- 44
++++VF +MP R+ SWN+++ + ++ ++ +P
Sbjct: 102 SSRKVFDEMPMRSTVSWNSIISAYCRFFLVDEAISMLQKMRLIGFVPTSTTFLCFLPICL 161
Query: 45 --------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLI 84
D+ +++ Y K G + AR LFD ++ W+ +I
Sbjct: 162 LQHGLSIQCCAFKFGLLEGSDIPLTNALLNMYVKHGQVHEARTLFDMMHEKSLISWTTVI 221
Query: 85 SGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
GY G EA +F M + +++ D + ++L+S C++ GNL LA V L + D
Sbjct: 222 GGYVDFGNVREAFSLFNQMRI-SMRLDFIVFITLISGCAREGNLLLASSVHSLLVKYGCD 280
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
+ + L+ M +KCG++ A + F+ ++ L+ + SMI + GY QA+ LFN
Sbjct: 281 -DKDPIDNLLVTMYSKCGDLISAQRAFDIAREKSLYLWTSMIAAYTHLGYPVQALRLFNT 339
Query: 205 MLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSG 264
+L + P+ A IL+AC+ + G+ E + + + S + ++ + R G
Sbjct: 340 LLGTAIKPNEATLATILSACADLGSLSMGEEIEEYILAN-GLHSSVQVQTSLIHMFCRCG 398
Query: 265 QLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
L++A + + + + A AW +++ +G E
Sbjct: 399 SLEKAKAVFERLATKDLA-AWSSMINGYAIHGMAE 432
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 127/303 (41%), Gaps = 42/303 (13%)
Query: 44 RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM 103
+ V T ++D Y+K D+AS+R +FD+ P R W+ +IS Y + L +EA+ + Q M
Sbjct: 82 QHVFVMTTLLDMYSKCYDLASSRKVFDEMPMRSTVSWNSIISAYCRFFLVDEAISMLQKM 141
Query: 104 ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGN 163
L+ P + + C L + C ++ + AL++M K G
Sbjct: 142 RLIGFVPTSTTFLCFLPICLLQHGLSIQC---CAFKFGLLEGSDIPLTNALLNMYVKHGQ 198
Query: 164 MDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
+ A LF+ M ++ L S+ ++I G G +A LFN+M + D F +++
Sbjct: 199 VHEARTLFDMMHEKSLISWTTVIGGYVDFGNVREAFSLFNQM-RISMRLDFIVFITLISG 257
Query: 224 CS-----------HGRLVEEG-------KHYFETMKSKYSMVPSPEH------------Y 253
C+ H LV+ G + TM SK + S + +
Sbjct: 258 CAREGNLLLASSVHSLLVKYGCDDKDPIDNLLVTMYSKCGDLISAQRAFDIAREKSLYLW 317
Query: 254 ACMVDLLSRSGQLKEAYELLKSM---PVESHASAWGALLGACKFYGEVELGE-----IVA 305
M+ + G +A L ++ ++ + + +L AC G + +GE I+A
Sbjct: 318 TSMIAAYTHLGYPVQALRLFNTLLGTAIKPNEATLATILSACADLGSLSMGEEIEEYILA 377
Query: 306 NRL 308
N L
Sbjct: 378 NGL 380
>28629.m000556 pentatricopeptide repeat-containing protein, putative
Length = 342
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 128/231 (55%), Gaps = 21/231 (9%)
Query: 33 NARKVFDDMPERDVVSFTVMIDG--------------------YAKVGDIASARALFDKA 72
NARKVFD+ + ++ + I G Y K G++ SAR LF+
Sbjct: 104 NARKVFDENRQSRILEVGMSIHGFCVKFGLVMDMSVGNCLLTMYVKCGEVGSARKLFNDI 163
Query: 73 PKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAK 132
P + W+ +I+GY+QNGL + L++++ MEL V PD + ++S+C+ +G + +
Sbjct: 164 PGKGLITWNAMINGYSQNGLATDVLELYREMELSGVSPDAVTLAGVLSSCAHLGAQSVGR 223
Query: 133 WVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIH 192
++ ++ + ALI++ A+CGN+ RA +F+ MP + + S+ +++ G +H
Sbjct: 224 EIEERMNVCGF-ASNPFLNNALINLYARCGNLVRARDIFDGMPVKSVVSWTAILGGYGMH 282
Query: 193 GYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSK 243
G E AV LFN M+ G+ PD AF +L+ACSH L+++G YF M+++
Sbjct: 283 GEGETAVKLFNDMIRTGVRPDGTAFVSVLSACSHAGLIDKGLEYFSMMQNQ 333
>29598.m000463 pentatricopeptide repeat-containing protein, putative
Length = 517
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 131/232 (56%), Gaps = 2/232 (0%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP 73
NL NA++ VK +L A + F + E+DVVS+ +I G AK GD+ AR LFD+ P
Sbjct: 262 NLILGNALLDMYVKCQELDLAHRTFSALTEKDVVSWNTIIAGCAKAGDLELARTLFDQMP 321
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKW 133
RD W+ LI+ YA G + M NV P+ M SL+SA +++G LD +W
Sbjct: 322 CRDFVSWNSLIAEYANRGDFIIVRDLLYDMVAENVVPNNTTMASLISAAAEIGALDQGRW 381
Query: 134 VDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHG 193
++ + I I + +ALIDM KCG+++ A +F E+ ++D+ + +MI G + HG
Sbjct: 382 AHGWVIRMQIKIDAV-LGSALIDMYCKCGSINNAFLIFNEIIEKDVILWTTMITGFAFHG 440
Query: 194 YAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYS 245
Y +A+ LF +M + P+ F +L ACSH LV++G F ++K +++
Sbjct: 441 YGSKALELFYEM-QANVTPNEITFVSVLAACSHSGLVDQGIEIFNSLKQRHT 491
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 148/335 (44%), Gaps = 52/335 (15%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I Y + G A +F + P D ++++I+G A+ G EA+++ M +++KPD
Sbjct: 166 LIKVYLENGLFCLAHKIFRQMPAPDVVSFNIMITGCAKQGCGLEAIQLLYDMMALDLKPD 225
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLS-QSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
E+ M+ L+ +C ++G K V ++ + SI + AL+DM KC +D A++
Sbjct: 226 EFTMLGLLVSCGKLGEARFGKTVHAWIERRKSITSSNLILGNALLDMYVKCQELDLAHRT 285
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK-------------------------- 204
F + ++D+ S+ ++I G + G E A LF++
Sbjct: 286 FSALTEKDVVSWNTIIAGCAKAGDLELARTLFDQMPCRDFVSWNSLIAEYANRGDFIIVR 345
Query: 205 -----MLNEGLIPDNAAFTVILTACSHGRLVEEGK---HYFETMKSKYSMVPSPEHYACM 256
M+ E ++P+N +++A + +++G+ + M+ K V + +
Sbjct: 346 DLLYDMVAENVVPNNTTMASLISAAAEIGALDQGRWAHGWVIRMQIKIDAVLG----SAL 401
Query: 257 VDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENS 316
+D+ + G + A+ + + +E W ++ F+G G +E++ +
Sbjct: 402 IDMYCKCGSINNAFLIFNEI-IEKDVILWTTMITGFAFHG---YGSKALELFYEMQANVT 457
Query: 317 SPYVLLSSIYAA------ADQWLDVSHVKNKMKER 345
+ S+ AA DQ +++ N +K+R
Sbjct: 458 PNEITFVSVLAACSHSGLVDQGIEIF---NSLKQR 489
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 116/256 (45%), Gaps = 25/256 (9%)
Query: 65 ARALFDK-APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACS 123
A LF+ P + ++++ +IS + A ++ M + PD++ ++ L+ +
Sbjct: 84 ALILFNHYTPYPNLYIYNTMISALSSA----TAQPLYNSMLSTGIGPDKHTLLYLLHSAR 139
Query: 124 QVGNLDLAKWVDCYLSQSSIDIGQT---HVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
V + K V C+ +I +G + ++ +LI + + G A+K+F +MP D+
Sbjct: 140 HVSEV---KQVQCH----AIILGLSTYRYLQNSLIKVYLENGLFCLAHKIFRQMPAPDVV 192
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEE--GKHYFE 238
S+ MI G + G +A+ L M+ L PD +L +C G+L E GK
Sbjct: 193 SFNIMITGCAKQGCGLEAIQLLYDMMALDLKPDEFTMLGLLVSC--GKLGEARFGKTVHA 250
Query: 239 TMKSKYSMVPSPEHYA-CMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
++ + S+ S ++D+ + +L A+ ++ E +W ++ C G+
Sbjct: 251 WIERRKSITSSNLILGNALLDMYVKCQELDLAHRTFSAL-TEKDVVSWNTIIAGCAKAGD 309
Query: 298 VELGEIVANRLFELEP 313
+EL A LF+ P
Sbjct: 310 LEL----ARTLFDQMP 321
>29761.m000430 pentatricopeptide repeat-containing protein, putative
Length = 400
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 165/323 (51%), Gaps = 48/323 (14%)
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELM----NVKPDEYIMVSLMS 120
AR +F+ + +L++ L++ YA N P+ L F+ M + KP+ +I ++
Sbjct: 61 ARYIFNHLHSPNIYLFTALVTAYASN--PDHHLSAFELYRDMVRRAHPKPNHFIFPHVLK 118
Query: 121 AC-------SQVGNLDLAKW-------VDCYLSQSSIDIG----------QTHVVA--AL 154
+C SQ+ L +++ VD Y S+ DIG + +VV+ A+
Sbjct: 119 SCQNTKVVHSQIAKLGFSQYPVVQTALVDSY-SRFMSDIGCARQVFDEMSERNVVSWTAM 177
Query: 155 IDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDN 214
I + G + A +F++MP+RD+ S+ S+I G + +G +A+ LF KM+ N
Sbjct: 178 ITGYTRVGEVGNAISIFDKMPERDVPSWNSIIAGCTQNGLFIEAICLFRKMILVAQSKPN 237
Query: 215 AAFTVI-LTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELL 273
TV L+AC H +++ GK EHY C+VD+L R+G+ +EA E++
Sbjct: 238 QVTTVCALSACGHTGMLQLGKWI--------------EHYGCLVDILGRAGRFEEALEVV 283
Query: 274 KSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWL 333
+ M +E WG+LL CK +G +L E +L E++P+N ++L+++Y +W
Sbjct: 284 REMKIEPDEVVWGSLLNGCKVHGNTDLAESAIKKLIEIDPKNGGYGIMLANLYGGLGKWD 343
Query: 334 DVSHVKNKMKERGLRKLPGCSWI 356
+V V+ +K+ K PGCSWI
Sbjct: 344 EVRKVRKMLKDHNAYKTPGCSWI 366
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 119/228 (52%), Gaps = 23/228 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKG-----GDLINARKVFDDMPERDVVSFTVMIDG 55
N K V Q+ + + + + LV D+ AR+VFD+M ER+VVS+T MI G
Sbjct: 121 QNTKVVHSQIAKLGFSQYPVVQTALVDSYSRFMSDIGCARQVFDEMSERNVVSWTAMITG 180
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELM-NVKPDEYI 114
Y +VG++ +A ++FDK P+RD W+ +I+G QNGL EA+ +F+ M L+ KP++
Sbjct: 181 YTRVGEVGNAISIFDKMPERDVPSWNSIIAGCTQNGLFIEAICLFRKMILVAQSKPNQVT 240
Query: 115 MVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM 174
V +SAC G L L KW++ Y L+D+ + G + A ++ EM
Sbjct: 241 TVCALSACGHTGMLQLGKWIEHY--------------GCLVDILGRAGRFEEALEVVREM 286
Query: 175 P-KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVIL 221
+ D + S++ G +HG + A K++ + P N + ++L
Sbjct: 287 KIEPDEVVWGSLLNGCKVHGNTDLAESAIKKLIE--IDPKNGGYGIML 332
>29736.m002044 pentatricopeptide repeat-containing protein, putative
Length = 327
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 119/185 (64%), Gaps = 1/185 (0%)
Query: 29 GDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYA 88
G L R+VFD +P+ D+V T M+ +K GD+ AR LFD P RD WS +I+GYA
Sbjct: 133 GCLGFCRQVFDLIPQPDLVCQTAMVSACSKCGDVGFARELFDSMPHRDHIAWSAMIAGYA 192
Query: 89 QNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQT 148
Q G EAL +F M+L +VK E MVS++SA SQ+G LD +W Y+ ++ I + T
Sbjct: 193 QCGQSREALALFHLMQLEDVKVSEVSMVSVLSASSQLGALDNGRWAHAYIERNKIPVTVT 252
Query: 149 HVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE 208
+ AL+DM AKCG+M++A ++F M +++++++ S I GL+++G + + LF+ M +
Sbjct: 253 -LGTALVDMYAKCGDMNKAMEVFWAMKEKNVYTWSSAIYGLAMNGAGHKCLELFSLMKKD 311
Query: 209 GLIPD 213
G++P+
Sbjct: 312 GVLPN 316
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 118/270 (43%), Gaps = 29/270 (10%)
Query: 34 ARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK------APKRDAFLWSVLISGY 87
+ ++ D + V + MI ++K + F++ D + ++ LI
Sbjct: 35 SNQILDQCNDPTVFALNSMIRAHSKGSKPQKSFYFFNRIIHSHNGISPDNYTFNFLIRAC 94
Query: 88 AQ-----NGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
AQ GL I G L D ++ L+ +++G L + V + Q
Sbjct: 95 AQLLAKEIGLAVHGCVIKYGFGL-----DPHVQSGLIFMYAELGCLGFCRQVFDLIPQPD 149
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ + QT +V+A +KCG++ A +LF+ MP RD ++ +MI G + G + +A+ LF
Sbjct: 150 L-VCQTAMVSAC----SKCGDVGFARELFDSMPHRDHIAWSAMIAGYAQCGQSREALALF 204
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGK---HYFETMKSKYSMVPSPEHYACMVDL 259
+ M E + + +L+A S ++ G+ Y E K ++ +VD+
Sbjct: 205 HLMQLEDVKVSEVSMVSVLSASSQLGALDNGRWAHAYIERNKIPVTVTLG----TALVDM 260
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALL 289
++ G + +A E+ +M E + W + +
Sbjct: 261 YAKCGDMNKAMEVFWAMK-EKNVYTWSSAI 289
>28470.m000433 pentatricopeptide repeat-containing protein, putative
Length = 718
Score = 147 bits (372), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 168/357 (47%), Gaps = 42/357 (11%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKG-------------------------GDLINARKV 37
A+ +F +MPE ++ SWNAM+ G ++ G L+N
Sbjct: 344 ARELFEKMPEWSVVSWNAMLAGYIRSLQWEEALDFVCLMRRTTEDIDHITLGLLLNVCAG 403
Query: 38 FDDMP--------------ERDVVSFTVMIDGYAKVGDIASARALFDK-APKRDAFLWSV 82
D+ ++ ++D Y K G++ SAR F + + RD W+
Sbjct: 404 ISDVEMGKQAHGFIYRHGFSSCILVGNALLDMYGKCGNLRSARVWFYQMSQSRDNISWNA 463
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
L++ YA++ +A+ IF M+ KP + +L++AC+ + LD K + ++ ++
Sbjct: 464 LLTSYARHHQSEQAMMIFGEMQ-WETKPSTFTFGTLLAACANIFALDQGKEIHGFMIRNG 522
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
++ T + AL+DM +KC + A +F RD+ + S+I G +G ++ + LF
Sbjct: 523 YNL-DTVISGALVDMYSKCRCLSYALTVFNRAGSRDVILWNSIILGCCHNGRGKEVLKLF 581
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
+M EG+ PD+ F +L AC + V+ YF +M K ++P EHY CM++L SR
Sbjct: 582 GQMEKEGVKPDHVTFHGVLLACMYEGHVKLAVEYFNSMSDKCCVIPRLEHYECMIELFSR 641
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPY 319
+ +K MP + AS + ACK +G + VA +L +L P SS +
Sbjct: 642 YRCMSRLENFVKGMPFDPTASMLIRVFDACKEHGPSRFRKWVAEQLNKLNPSISSQF 698
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 11/213 (5%)
Query: 27 KGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
K G L +AR +FD RDV+S+T M+ YA G AR LF+K P+ W+ +++G
Sbjct: 306 KCGKLESARMIFDQHGSRDVISWTSMVSAYALSGRTREARELFEKMPEWSVVSWNAMLAG 365
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ----SS 142
Y ++ EAL M D + L++ C+ + ++++ K ++ + S
Sbjct: 366 YIRSLQWEEALDFVCLMRRTTEDIDHITLGLLLNVCAGISDVEMGKQAHGFIYRHGFSSC 425
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK-RDLFSYCSMIQGLSIHGYAEQAVGL 201
I +G AL+DM KCGN+ A F +M + RD S+ +++ + H +EQA+ +
Sbjct: 426 ILVGN-----ALLDMYGKCGNLRSARVWFYQMSQSRDNISWNALLTSYARHHQSEQAMMI 480
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK 234
F +M E P F +L AC++ +++GK
Sbjct: 481 FGEMQWETK-PSTFTFGTLLAACANIFALDQGK 512
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 130/295 (44%), Gaps = 36/295 (12%)
Query: 31 LINARKVFDDM----PERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
++ ARK+ + P + I+ Y K + AR LFD+ P+RD W+ +I
Sbjct: 73 IVEARKIESHLITFNPTPPIFLLNRAIETYGKCECLKDARELFDEMPQRDGGSWNAIIKA 132
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG 146
Y Q G +AL +F+ M V +E S++ +CS V +L L++ + + + G
Sbjct: 133 YTQCGYAEKALGLFKDMNKEGVFANEITFASVLKSCSDVLDLSLSRQIHGLIVKCGF-CG 191
Query: 147 QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
+ +AL+D+ KC M A +F E+ + ++ +++ G +AV +F KM
Sbjct: 192 NVILGSALVDVYGKCKVMSEARLMFNEIENCNDVTWNVIVRRYLDVGNEREAVKMFFKMF 251
Query: 207 NEGLIPDNAAFTVILTACSHGRLVEEG--------KHYFE----------TMKSKYSMVP 248
+ P N F+ L ACS R + EG K FE M +K +
Sbjct: 252 QTDVRPLNFTFSNALIACSAMRALNEGMQIHAFAIKIKFEEDEAVSSSLSNMYAKCGKLE 311
Query: 249 SP-----EH-------YACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
S +H + MV + SG+ +EA EL + MP E +W A+L
Sbjct: 312 SARMIFDQHGSRDVISWTSMVSAYALSGRTREARELFEKMP-EWSVVSWNAMLAG 365
>29844.m003272 pentatricopeptide repeat-containing protein, putative
Length = 477
Score = 147 bits (372), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 117/184 (63%), Gaps = 1/184 (0%)
Query: 34 ARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLP 93
A+++F +M R++V T M+ GY KVG I AR +F++ ++D WS++ISGYA++ P
Sbjct: 279 AKELFTNMSSRNLVVSTTMVSGYLKVGRIEDARLIFNQMDEKDLICWSIMISGYAESDQP 338
Query: 94 NEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAA 153
EAL +F M+ + ++PDE M+S++SAC+ +G LD AK + ++ ++ + V A
Sbjct: 339 QEALHLFNEMQFLGIEPDEVTMLSVISACAHLGVLDQAKRIHMFVDKNGFGKALS-VNNA 397
Query: 154 LIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPD 213
LIDM AKCG ++ A +FE+M R++ S+ SMI +IHG A A+ F++M E + P+
Sbjct: 398 LIDMYAKCGCLEAARAVFEKMQIRNVISWTSMINAFAIHGDANSALNYFHQMKEENVEPN 457
Query: 214 NAAF 217
F
Sbjct: 458 AVTF 461
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 148/302 (49%), Gaps = 41/302 (13%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T ++ Y G I AR +FDK RD WS +I+GY Q G ++AL++F+ M NV+
Sbjct: 163 TGLMGMYVGCGKILEARLVFDKMSYRDVVTWSTMINGYYQGGHFDDALQLFEEMRSSNVE 222
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
PD+ ++ +++SAC++ NL K V + +++ + H+ + LI + A CG MD A +
Sbjct: 223 PDKMVLSTIISACARAKNLGYGKEVHDLIIENNFAL-DPHLESGLISLYAGCGCMDMAKE 281
Query: 170 LFEEMPKRDLFSYCSMIQG--------------------------LSIHGYAE-----QA 198
LF M R+L +M+ G + I GYAE +A
Sbjct: 282 LFTNMSSRNLVVSTTMVSGYLKVGRIEDARLIFNQMDEKDLICWSIMISGYAESDQPQEA 341
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACM 256
+ LFN+M G+ PD +++AC+H ++++ K H F K+ + S + +
Sbjct: 342 LHLFNEMQFLGIEPDEVTMLSVISACAHLGVLDQAKRIHMFVD-KNGFGKALSVNN--AL 398
Query: 257 VDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENS 316
+D+ ++ G L+ A + + M + + S W +++ A +G+ N +++ EN
Sbjct: 399 IDMYAKCGCLEAARAVFEKMQIRNVIS-WTSMINAFAIHGD---ANSALNYFHQMKEENV 454
Query: 317 SP 318
P
Sbjct: 455 EP 456
>27837.m000163 pentatricopeptide repeat-containing protein, putative
Length = 679
Score = 147 bits (372), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 159/334 (47%), Gaps = 59/334 (17%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP------------------- 42
+ +RVF + ER WNAM+ G + A +F +M
Sbjct: 336 SGRRVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPAS 395
Query: 43 ---------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
ERD ++D Y+++ + ++ +FD RD W+
Sbjct: 396 ARCESFFSKESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWN 455
Query: 82 VLISGYAQNGLPNEALKIFQGMELMN-------------VKPDEYIMVSLMSACSQVGNL 128
+I+GY +G N+AL + M+ N KP+ +++++ C+ + L
Sbjct: 456 TMITGYVISGCYNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLAAL 515
Query: 129 DLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQG 188
K + Y ++++ + V +AL+DM AKCG ++ + ++F++MP +++ ++ ++
Sbjct: 516 AKGKEIHAYAVRNAL-ASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKNVITWNVIVMA 574
Query: 189 LSIHGYAEQAVGLFNKMLNEG-----LIPDNAAFTVILTACSHGRLVEEGKHYFETMKSK 243
+HG E+A+ LF M+ +G + P IL ACSH +V+EG F MK
Sbjct: 575 YGMHGNGEEALELFKDMVAKGDNVGEVKPTEVTMIAILAACSHSGMVDEGLKLFHRMKDD 634
Query: 244 YSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP 277
+ + P P+HYAC+ DLL R+G++++AY+ + +MP
Sbjct: 635 HGIEPGPDHYACVADLLGRAGKVEQAYDFINTMP 668
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 119/265 (44%), Gaps = 42/265 (15%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV--VSFTVM------ 52
D+ +VF ++ ER+L SWN+++ + + A + F M D+ SFT++
Sbjct: 130 DDVYKVFDRINERDLVSWNSLISAFCRAQEWELALEAFRFMLAEDLEPSSFTLVSPVIAC 189
Query: 53 --------------IDGY-------------------AKVGDIASARALFDKAPKRDAFL 79
I GY A +G + A+ LF R+
Sbjct: 190 SNLRKHEGLRLGKQIHGYCFRNGHWSTFTNNALMTMYANLGRLDDAKFLFKLFEDRNLIS 249
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLS 139
W+ +IS ++QN EAL + M L VKPD + S++ ACS + L K + Y
Sbjct: 250 WNTMISSFSQNERFVEALMSLRYMVLEGVKPDGVTLASVLPACSYLEMLGTGKEIHAYAL 309
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAV 199
+S I + V +AL+DM CG + ++F+ + +R + +MI G + + + E+A+
Sbjct: 310 RSGDLIENSFVGSALVDMYCNCGQVGSGRRVFDGILERKTGLWNAMIAGYAQNEHDEKAL 369
Query: 200 GLFNKMLN-EGLIPDNAAFTVILTA 223
LF +M+ GL P+ I+ A
Sbjct: 370 MLFIEMVAVAGLCPNTTTMASIVPA 394
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 149/356 (41%), Gaps = 63/356 (17%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVF---------------------- 38
D+AK +F +RNL SWN M+ + + A
Sbjct: 233 DDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLEGVKPDGVTLASVLPAC 292
Query: 39 -------------------DDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFL 79
D+ E V + ++D Y G + S R +FD +R L
Sbjct: 293 SYLEMLGTGKEIHAYALRSGDLIENSFVG-SALVDMYCNCGQVGSGRRVFDGILERKTGL 351
Query: 80 WSVLISGYAQNGLPNEALKIFQGM-ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ +I+GYAQN +AL +F M + + P+ M S++ A ++ + + + Y+
Sbjct: 352 WNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASARCESFFSKESIHGYV 411
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+ ++ + +V AL+DM ++ M+ + +F+ M RD+ S+ +MI G I G A
Sbjct: 412 IKRDLERDR-YVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWNTMITGYVISGCYNDA 470
Query: 199 VGLFNKM--LNEGL-----------IPDNAAFTVILTACSHGRLVEEGK--HYFETMKSK 243
+ + ++M NEG+ P++ +L C+ + +GK H + +
Sbjct: 471 LLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLAALAKGKEIHAYAVRNAL 530
Query: 244 YSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
S V + +VD+ ++ G L + + MP++ + W ++ A +G E
Sbjct: 531 ASEVTVG---SALVDMYAKCGCLNLSRRVFDQMPIK-NVITWNVIVMAYGMHGNGE 582
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 6/243 (2%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+++ Y K ++ +FD+ +RD W+ LIS + + AL+ F+ M +++P
Sbjct: 119 LVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRAQEWELALEAFRFMLAEDLEPS 178
Query: 112 EYIMVSLMSACSQVGN---LDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
+ +VS + ACS + L L K + Y ++ T AL+ M A G +D A
Sbjct: 179 SFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNGH--WSTFTNNALMTMYANLGRLDDAK 236
Query: 169 KLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGR 228
LF+ R+L S+ +MI S + +A+ M+ EG+ PD +L ACS+
Sbjct: 237 FLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLEGVKPDGVTLASVLPACSYLE 296
Query: 229 LVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGAL 288
++ GK ++ + + +VD+ GQ+ + + +E W A+
Sbjct: 297 MLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSGRRVFDGI-LERKTGLWNAM 355
Query: 289 LGA 291
+
Sbjct: 356 IAG 358
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 5/185 (2%)
Query: 49 FTVMIDGYAKVGDIASARALFDKAPK-----RDAFLWSVLISGYAQNGLPNEALKIFQGM 103
F+ ++ A+ ++ + + L PK R W + ++ L EA+ + M
Sbjct: 9 FSPILSSSAQTHELPTKKFLSHSPPKPISQSRSQASWIESLRFNTRSNLFREAISTYVDM 68
Query: 104 ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGN 163
L V PD Y ++ A + + +L+L K + ++ + + + +L++ KC
Sbjct: 69 ILSGVSPDSYAFPVVLKAVTGLQDLNLGKQIHAHVVKYGYESSSVAIANSLVNFYGKCSE 128
Query: 164 MDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
+D K+F+ + +RDL S+ S+I E A+ F ML E L P + + A
Sbjct: 129 LDDVYKVFDRINERDLVSWNSLISAFCRAQEWELALEAFRFMLAEDLEPSSFTLVSPVIA 188
Query: 224 CSHGR 228
CS+ R
Sbjct: 189 CSNLR 193
>30128.m008544 pentatricopeptide repeat-containing protein, putative
Length = 837
Score = 147 bits (371), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 142/310 (45%), Gaps = 40/310 (12%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV-------------- 46
D A+ M E+N +W ++ G + G NA +F M DV
Sbjct: 243 DGAELFINNMAEKNAVAWTGLMVGYTQAGKQKNALDLFAKMVCEDVELDEYVFSISLKAC 302
Query: 47 -----VSF--------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+SF T ++D Y K A +F+ + + WS
Sbjct: 303 AGLKELSFGRQIHGHIVKLGLESEVSVGTPLVDFYIKCASFELASKVFEGISEPNDVSWS 362
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I+GY Q G EALKIF+ + + + S+ ACS + + V +
Sbjct: 363 AMITGYCQIGEFEEALKIFESLRSNIENLNSFTYTSIFQACSALADFSTGTQVHADAIKR 422
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
S+ I H +A+I M ++CG +D AN FE + D ++ +++ G + G A +A+
Sbjct: 423 SL-IASQHGESAMITMYSRCGRLDYANLAFETIDGPDAVAWTAIVAGYAYQGNATEALKH 481
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F +M G P+ F +LTACSH LV EGK Y + M SKY M P+ +HY C++D+ S
Sbjct: 482 FWRMQGSGARPNAITFIAVLTACSHSGLVAEGKQYLDLMSSKYGMAPTIDHYDCVIDIYS 541
Query: 262 RSGQLKEAYE 271
R+G L+EA E
Sbjct: 542 RAGYLQEALE 551
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 150/323 (46%), Gaps = 44/323 (13%)
Query: 36 KVFDDMPERDVVSFTVMIDG-----YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQN 90
K+ ++ R V +V ++ Y + A +FDK +R+ W +IS YA++
Sbjct: 110 KIIHELLRRTVEKPSVFLENTVLKMYCVCESLEDAYKVFDKMIERNLISWGTIISAYAEH 169
Query: 91 GLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHV 150
GL ++AL +F M + + P+ I + L+ + L + K + + +S + G + +
Sbjct: 170 GLLDKALSLFISMISLGINPNSSIYIDLLRSLLNPSLLGIGKQIHSHSIRSGLGAGVS-I 228
Query: 151 VAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGL 210
A+ +M +CG +D A M +++ ++ ++ G + G + A+ LF KM+ E +
Sbjct: 229 NTAISNMYVRCGWLDGAELFINNMAEKNAVAWTGLMVGYTQAGKQKNALDLFAKMVCEDV 288
Query: 211 IPDNAAFTVILTACS-----------HGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDL 259
D F++ L AC+ HG +V+ G ++S+ S V +P +VD
Sbjct: 289 ELDEYVFSISLKACAGLKELSFGRQIHGHIVKLG------LESEVS-VGTP-----LVDF 336
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALL-GACKFYGEVELGEIVANRLFE-----LEP 313
+ + A ++ + + E + +W A++ G C+ GE E A ++FE +E
Sbjct: 337 YIKCASFELASKVFEGIS-EPNDVSWSAMITGYCQI-GEFE----EALKIFESLRSNIEN 390
Query: 314 ENSSPYVLLSSIYAAADQWLDVS 336
NS Y +SI+ A D S
Sbjct: 391 LNSFTY---TSIFQACSALADFS 410
>30008.m000805 pentatricopeptide repeat-containing protein, putative
Length = 324
Score = 147 bits (371), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 162/319 (50%), Gaps = 37/319 (11%)
Query: 13 RNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKA 72
RN+ SWN ++GGL+ G + A++VF M +RD+VS+T+M+ G+A+VG I AR F++
Sbjct: 2 RNVFSWNLVIGGLLNGQQVDLAKEVFRQMSDRDIVSWTIMVSGFARVGRITEAREFFEEM 61
Query: 73 PKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAK 132
P +D W+ L+ GY +N + A +FQ + + ++ + L+ C Q N D +
Sbjct: 62 PVKDVRAWNALMVGYMENQQADMAEVLFQTLPERDSDSWKHFINGLL--CCQRVN-DAVR 118
Query: 133 WVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCS-------- 184
+ + V+ LI + G+++ A+ E++P D+ S+ +
Sbjct: 119 YF--IVMPQKCKKPWNLVLLGLI----RSGHVEAAHGFLEKLPHHDVVSWTNVLVGYFGL 172
Query: 185 ------------MIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE- 231
+I GL + + E+ + F ++ + G PD A FT IL CS+
Sbjct: 173 GEVGSDATVWNVIICGLGENNHGEEGLKFFVRIKDLGPSPDAATFTSILIICSNLPASHL 232
Query: 232 EGKHYFETMKSKYS----MVPSPEHYACMVDLLSRSGQLKEAYELLKSMP---VESHASA 284
G+ + E +K+ + P+ EHYAC++DLL R G + EA L M +E S
Sbjct: 233 GGQIHAEMIKTCFDHDWWTKPTDEHYACLIDLLRRFGLIDEAMTFLNQMRADGIEVPISV 292
Query: 285 WGALLGACKFYGEVELGEI 303
WGALLGAC+ + + LGEI
Sbjct: 293 WGALLGACRIHKNIALGEI 311
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 37/224 (16%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
++A R F+ MP++ WN ++ GL++ G + A + +P DVVS+T ++ GY +G
Sbjct: 114 NDAVRYFIVMPQKCKKPWNLVLLGLIRSGHVEAAHGFLEKLPHHDVVSWTNVLVGYFGLG 173
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
++ S DA +W+V+I G +N E LK F ++ + PD S++
Sbjct: 174 EVGS-----------DATVWNVIICGLGENNHGEEGLKFFVRIKDLGPSPDAATFTSILI 222
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
CS + L GQ H +M C + D K +E
Sbjct: 223 ICSNLPASHLG--------------GQIHA-----EMIKTCFDHDWWTKPTDE------- 256
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
Y +I L G ++A+ N+M +G+ + + +L AC
Sbjct: 257 HYACLIDLLRRFGLIDEAMTFLNQMRADGIEVPISVWGALLGAC 300
>30156.m001722 pentatricopeptide repeat-containing protein, putative
Length = 462
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 128/253 (50%), Gaps = 41/253 (16%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGD--------------------------LINARK 36
A+ VF +MP R+LTSWN M+ G +K G L +
Sbjct: 197 ARMVFDRMPVRDLTSWNTMISGYLKNGKPREVLAIFNLMKQIGLSVDDMTLIGLLCTCAE 256
Query: 37 VFDDMPERDVVSFTV--------------MIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+F + +++ + V +I+ Y K + AR LF+ +D W+
Sbjct: 257 LFAEKQGKEIHGYVVRNRHSVFNHFLINSLIEMYCKCNSMVDARKLFEHMAWKDTVSWNS 316
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+ISGYA+N E+L++F M L KPD+ ++++ AC Q+ ++ + V YLS+
Sbjct: 317 MISGYARNRDAFESLRVFCRMVLEGTKPDKITFITVLGACEQITAMEFGRSVHSYLSKKG 376
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
V ALIDM AKCGN+ A+ +FEEMP+++LF + +MI G IHG +A+ LF
Sbjct: 377 FS-ATIFVATALIDMYAKCGNLACAHLVFEEMPEKNLFCWSAMISGYGIHGMGREAISLF 435
Query: 203 NKMLNEGLIPDNA 215
++M+ +IPD A
Sbjct: 436 HEMIKNHIIPDEA 448
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 153/333 (45%), Gaps = 41/333 (12%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE------------------- 43
A+ +F + +N WN M+ G G + A ++ DM
Sbjct: 96 AQIIFDGIVLKNSFLWNFMIRGYACNGFPVKALFLYQDMSSFGQKADKFTYPFVIKACGD 155
Query: 44 -RDV-----VSFTVMIDG--------------YAKVGDIASARALFDKAPKRDAFLWSVL 83
RDV V V+I G Y+K G++ AR +FD+ P RD W+ +
Sbjct: 156 LRDVEFGWRVHCEVVITGFNLDIYVGNSLLAMYSKFGNMKMARMVFDRMPVRDLTSWNTM 215
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
ISGY +NG P E L IF M+ + + D+ ++ L+ C+++ K + Y+ ++
Sbjct: 216 ISGYLKNGKPREVLAIFNLMKQIGLSVDDMTLIGLLCTCAELFAEKQGKEIHGYVVRNRH 275
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+ ++ +LI+M KC +M A KLFE M +D S+ SMI G + + A +++ +F
Sbjct: 276 SVFNHFLINSLIEMYCKCNSMVDARKLFEHMAWKDTVSWNSMISGYARNRDAFESLRVFC 335
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
+M+ EG PD F +L AC +E G+ + SK + ++D+ ++
Sbjct: 336 RMVLEGTKPDKITFITVLGACEQITAMEFGRSVHSYL-SKKGFSATIFVATALIDMYAKC 394
Query: 264 GQLKEAYELLKSMPVESHASAWGALLGACKFYG 296
G L A+ + + MP E + W A++ +G
Sbjct: 395 GNLACAHLVFEEMP-EKNLFCWSAMISGYGIHG 426
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 125/237 (52%), Gaps = 8/237 (3%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
YA G +A+A+ +FD +++FLW+ +I GYA NG P +AL ++Q M K D++
Sbjct: 87 YASCGLMAAAQIIFDGIVLKNSFLWNFMIRGYACNGFPVKALFLYQDMSSFGQKADKFTY 146
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
++ AC + +++ V C + + ++ +V +L+ M +K GNM A +F+ MP
Sbjct: 147 PFVIKACGDLRDVEFGWRVHCEVVITGFNL-DIYVGNSLLAMYSKFGNMKMARMVFDRMP 205
Query: 176 KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
RDL S+ +MI G +G + + +FN M GL D+ +L C+ ++GK
Sbjct: 206 VRDLTSWNTMISGYLKNGKPREVLAIFNLMKQIGLSVDDMTLIGLLCTCAELFAEKQGKE 265
Query: 236 -YFETMKSKYSMVPSPEHYAC--MVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
+ +++++S+ H+ ++++ + + +A +L + M + S W +++
Sbjct: 266 IHGYVVRNRHSVF---NHFLINSLIEMYCKCNSMVDARKLFEHMAWKDTVS-WNSMI 318
>30174.m008973 pentatricopeptide repeat-containing protein, putative
Length = 607
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 152/302 (50%), Gaps = 47/302 (15%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV-----------SF 49
++A RV M ++ SWN+M+ G V+ G A +F++M RD+ SF
Sbjct: 273 NSANRVLENMEVNDVVSWNSMIVGCVREGFEAEALSLFNEMHARDIKIDDYTYPSVLNSF 332
Query: 50 TVM----------------------------IDGYAKVGDIASARALFDKAPKRDAFLWS 81
M +D YAK G++ A +F++ P +D W+
Sbjct: 333 ASMKDIQSAKSAHCLIIKTGFGAYTLVNNALVDMYAKQGNLDYAFTVFNQMPDKDVVSWT 392
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
L++GY+ NG +A+K+F M + V PD+ ++ S++SAC+++ + + V + +S
Sbjct: 393 SLVTGYSYNGSYEDAIKLFCDMRIAGVCPDQIVLASVLSACAELTVTEFGQQVHATILKS 452
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ + +L+ M AKCG ++ AN +F+ M RD+ S+ ++I G + +G + ++
Sbjct: 453 GL-CSSLSIDNSLVTMYAKCGGIEDANYVFDSMQIRDVISWTALIVGYAQNGRGKDSLHF 511
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKY-------SMVPSPEHYA 254
+++M+ G PD F +L ACSH LVE+G+ YFE+M +Y +PS +
Sbjct: 512 YDQMIATGTKPDFITFIGLLFACSHTGLVEDGRRYFESMDKEYGASHKWFKQLPSSHIFQ 571
Query: 255 CM 256
C+
Sbjct: 572 CV 573
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 138/286 (48%), Gaps = 26/286 (9%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N + L K G + AR +FD +PERD S+ MI YA G + A+ LF +AP + +
Sbjct: 26 NQQLNDLSKSGRIDEARHIFDKLPERDEFSWNTMIAAYANSGRLTDAKQLFCEAPLKSSI 85
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
WS LISG+ + EA +++ M+ +P+ Y + S++ CS+ G L + + Y
Sbjct: 86 TWSSLISGFCKYEFDIEAFELYLQMQFEGQRPNHYTLGSILRLCSRTGFLQKGERIHGYA 145
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQ 197
++ +D VV +L+D+ AKC + A +FE + ++ ++ +M+ G S +G +
Sbjct: 146 IKTRLD-ANVFVVTSLVDLYAKCECISEAEYIFEMVADSKNHATWTAMLTGYSHNGDGFR 204
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILTACS-----------HGRLVEEGKHYFETMKSKYSM 246
A+ F M EG+ + F ILTAC HG +V G ++S
Sbjct: 205 AIKCFRDMRAEGVESNQFTFPSILTACGAVSDHVFGVQVHGCIVRSGFGANIFVQSA--- 261
Query: 247 VPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGAC 292
+VD+ ++ L A +L++M V S W +++ C
Sbjct: 262 ---------LVDMYAKCRDLNSANRVLENMEVNDVVS-WNSMIVGC 297
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 141/316 (44%), Gaps = 42/316 (13%)
Query: 13 RNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVS--FT-------------------- 50
+N +W AM+ G GD A K F DM V S FT
Sbjct: 184 KNHATWTAMLTGYSHNGDGFRAIKCFRDMRAEGVESNQFTFPSILTACGAVSDHVFGVQV 243
Query: 51 -----------------VMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLP 93
++D YAK D+ SA + + D W+ +I G + G
Sbjct: 244 HGCIVRSGFGANIFVQSALVDMYAKCRDLNSANRVLENMEVNDVVSWNSMIVGCVREGFE 303
Query: 94 NEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAA 153
EAL +F M ++K D+Y S++++ + + ++ AK C + ++ T V A
Sbjct: 304 AEALSLFNEMHARDIKIDDYTYPSVLNSFASMKDIQSAKSAHCLIIKTGFG-AYTLVNNA 362
Query: 154 LIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPD 213
L+DM AK GN+D A +F +MP +D+ S+ S++ G S +G E A+ LF M G+ PD
Sbjct: 363 LVDMYAKQGNLDYAFTVFNQMPDKDVVSWTSLVTGYSYNGSYEDAIKLFCDMRIAGVCPD 422
Query: 214 NAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELL 273
+L+AC+ + E G+ T+ K + S +V + ++ G +++A +
Sbjct: 423 QIVLASVLSACAELTVTEFGQQVHATIL-KSGLCSSLSIDNSLVTMYAKCGGIEDANYVF 481
Query: 274 KSMPVESHASAWGALL 289
SM + S W AL+
Sbjct: 482 DSMQIRDVIS-WTALI 496
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 139/281 (49%), Gaps = 13/281 (4%)
Query: 24 GLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK-APKRDAFLWSV 82
G ++ G+ I+ + + + +V T ++D YAK I+ A +F+ A ++ W+
Sbjct: 133 GFLQKGERIHGYAIKTRL-DANVFVVTSLVDLYAKCECISEAEYIFEMVADSKNHATWTA 191
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+++GY+ NG A+K F+ M V+ +++ S+++AC V + V + +S
Sbjct: 192 MLTGYSHNGDGFRAIKCFRDMRAEGVESNQFTFPSILTACGAVSDHVFGVQVHGCIVRSG 251
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
V +AL+DM AKC +++ AN++ E M D+ S+ SMI G G+ +A+ LF
Sbjct: 252 FG-ANIFVQSALVDMYAKCRDLNSANRVLENMEVNDVVSWNSMIVGCVREGFEAEALSLF 310
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH----YFETMKSKYSMVPSPEHYACMVD 258
N+M + D+ + +L + + + ++ K +T Y++V + +VD
Sbjct: 311 NEMHARDIKIDDYTYPSVLNSFASMKDIQSAKSAHCLIIKTGFGAYTLVNNA-----LVD 365
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
+ ++ G L A+ + MP + +W +L+ + G E
Sbjct: 366 MYAKQGNLDYAFTVFNQMP-DKDVVSWTSLVTGYSYNGSYE 405
>29801.m003061 pentatricopeptide repeat-containing protein, putative
Length = 318
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 125/213 (58%), Gaps = 8/213 (3%)
Query: 50 TVMIDGYAKVGDIASARALFDK---APKRDAFLWSVLISGYAQNGLPNEALKIFQGM-EL 105
V++ Y K+G I +R FD + KR W+ +I+ Y QNG EAL IF M +
Sbjct: 86 NVLVYLYGKLGKIEKSRERFDDISDSGKRSVLPWNSMINAYVQNGYALEALCIFHLMVKD 145
Query: 106 MNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL---SQSSIDIGQTHVVAALIDMNAKCG 162
N +P+ MVS++SAC+QVGNL+L +WV YL + + T + ALIDM +KCG
Sbjct: 146 PNSRPNHVTMVSVLSACAQVGNLELGRWVHEYLKFKGRKGVLESNTFLATALIDMYSKCG 205
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
++D+A ++F +M +D+ S+ +MI GL+I+G ++AV LF+K+ GL P+ F +L
Sbjct: 206 SLDKAKEVFYQMVSKDVVSFNAMIMGLAINGEGQEAVKLFSKVQELGLHPNGGTFLGLLW 265
Query: 223 ACSHGRLVEEGKHYFETMKSKYSMVPSPEHYAC 255
ACSH L +EG+ F M + S VP C
Sbjct: 266 ACSHSGLSDEGRQIFLDM-TLASEVPRKRIGGC 297
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 117/233 (50%), Gaps = 20/233 (8%)
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKW------ 133
W+ LISG+AQ+G E LKIF M N++P+ MVS+ SACS + + KW
Sbjct: 10 WTSLISGFAQSGYSEEVLKIFCLMVKENLEPENDTMVSVFSACSNLEICQIEKWLTVLVE 69
Query: 134 --VDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP---KRDLFSYCSMIQG 188
+D L S+ D V L+ + K G ++++ + F+++ KR + + SMI
Sbjct: 70 LNIDGNLKSSTCD----KVNNVLVYLYGKLGKIEKSRERFDDISDSGKRSVLPWNSMINA 125
Query: 189 LSIHGYAEQAVGLFNKMLNE-GLIPDNAAFTVILTACSHGRLVEEGK--HYFETMKSKYS 245
+GYA +A+ +F+ M+ + P++ +L+AC+ +E G+ H + K +
Sbjct: 126 YVQNGYALEALCIFHLMVKDPNSRPNHVTMVSVLSACAQVGNLELGRWVHEYLKFKGRKG 185
Query: 246 MVPSPEHYAC-MVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
++ S A ++D+ S+ G L +A E+ M V ++ A++ GE
Sbjct: 186 VLESNTFLATALIDMYSKCGSLDKAKEVFYQM-VSKDVVSFNAMIMGLAINGE 237
>29854.m001091 pentatricopeptide repeat-containing protein, putative
Length = 655
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 132/242 (54%), Gaps = 10/242 (4%)
Query: 14 NLTSWNAMVGGLVKGGDL----INARKVFDDMPERD-VVSFTVMIDGYAKVGDIASARAL 68
+L S A VG L+ G + I FD RD ++ +ID Y K DI RA+
Sbjct: 387 SLLSGCASVGALLHGKETHCYSIKCVLNFDRSDPRDELLVVNAIIDMYTKCKDINVGRAI 446
Query: 69 FDKAPKRD--AFLWSVLISGYAQNGLPNEALKIFQGMELM---NVKPDEYIMVSLMSACS 123
F+ P +D W+ +I GYAQ+G N+AL++F M +VKP+ + + + AC+
Sbjct: 447 FNSIPPKDRNVVTWTAMIGGYAQHGEANDALELFSQMLKQYNRSVKPNAFTISCALMACA 506
Query: 124 QVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYC 183
++ L + + ++ + D +V LIDM +K G+MD A +F+ M R+ S+
Sbjct: 507 RLAALRFGRQIHAFVLRDQYDCDVLYVANCLIDMYSKSGDMDAARLVFDNMKHRNTVSWT 566
Query: 184 SMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSK 243
S++ G +HG+ E+A+ +F++M EGL+ D F V+L ACSH +V+EG YF M +
Sbjct: 567 SLMTGYGMHGHGEEAIKVFDEMRREGLVSDGITFLVVLYACSHSGMVDEGIKYFHDMCKE 626
Query: 244 YS 245
+S
Sbjct: 627 FS 628
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 156/298 (52%), Gaps = 20/298 (6%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKR--- 75
N++V K G + A KVFD M +DVVS+ M+ GY+++G A LF+K +
Sbjct: 285 NSLVDMYAKCGLMCIANKVFDRMQHKDVVSWNAMVTGYSQIGKFEDALGLFEKMREEKIQ 344
Query: 76 -DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV 134
D WS +I+GYAQ GL EAL +F+ M++ ++P+E +VSL+S C+ VG L K
Sbjct: 345 LDVVSWSAVIAGYAQRGLGYEALNVFRQMQVCGLRPNEVTLVSLLSGCASVGALLHGKET 404
Query: 135 DCYLSQSSIDIGQTH------VVAALIDMNAKCGNMDRANKLFEEMPKRD--LFSYCSMI 186
CY + ++ ++ VV A+IDM KC +++ +F +P +D + ++ +MI
Sbjct: 405 HCYSIKCVLNFDRSDPRDELLVVNAIIDMYTKCKDINVGRAIFNSIPPKDRNVVTWTAMI 464
Query: 187 QGLSIHGYAEQAVGLFNKML---NEGLIPDNAAFTVILTACSHGRLVEEGK--HYFETMK 241
G + HG A A+ LF++ML N + P+ + L AC+ + G+ H F ++
Sbjct: 465 GGYAQHGEANDALELFSQMLKQYNRSVKPNAFTISCALMACARLAALRFGRQIHAF-VLR 523
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
+Y C++D+ S+SG + A + +M + S W +L+ +G E
Sbjct: 524 DQYD-CDVLYVANCLIDMYSKSGDMDAARLVFDNMKHRNTVS-WTSLMTGYGMHGHGE 579
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 100/192 (52%), Gaps = 7/192 (3%)
Query: 56 YAKVGDIASARALFDKAPKRDAF---LWSVLISGYAQNGLPNEALKIFQGMELM---NVK 109
Y + G + AR +FD+ + F W+ +I+ Y Q+G +++F+ M + ++
Sbjct: 184 YGRCGASSYARQMFDELLMGEVFDLVSWNSMIAVYLQSGDLKSGIELFRRMWKVGEFDIV 243
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
PD +V+++ AC+ +G+ K V + + + V +L+DM AKCG M ANK
Sbjct: 244 PDAVSLVNVLPACASMGDWLCGKQVHGFAIRYGL-FEDVFVANSLVDMYAKCGLMCIANK 302
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
+F+ M +D+ S+ +M+ G S G E A+GLF KM E + D +++ ++ + L
Sbjct: 303 VFDRMQHKDVVSWNAMVTGYSQIGKFEDALGLFEKMREEKIQLDVVSWSAVIAGYAQRGL 362
Query: 230 VEEGKHYFETMK 241
E + F M+
Sbjct: 363 GYEALNVFRQMQ 374
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 7/154 (4%)
Query: 78 FLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY 137
+ W+ LI + GL +L +F+ M +N PD Y + AC ++ + +
Sbjct: 105 YWWNALIRRAVRLGLLQHSLSLFRTMRRLNWSPDHYTFPFVFKACGELPSFLHGSCIHAI 164
Query: 138 LSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM---PKRDLFSYCSMIQGLSIHGY 194
+ + D V A++ M +CG A ++F+E+ DL S+ SMI G
Sbjct: 165 VCSTGFD-SNVFVCNAVVAMYGRCGASSYARQMFDELLMGEVFDLVSWNSMIAVYLQSGD 223
Query: 195 AEQAVGLFNKMLNEG---LIPDNAAFTVILTACS 225
+ + LF +M G ++PD + +L AC+
Sbjct: 224 LKSGIELFRRMWKVGEFDIVPDAVSLVNVLPACA 257
>28962.m000446 pentatricopeptide repeat-containing protein, putative
Length = 311
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 134/229 (58%), Gaps = 4/229 (1%)
Query: 34 ARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLP 93
ARKVFD+M + D+VS+ +++ YA VG++ +A +F+ + W+V+I GY + P
Sbjct: 42 ARKVFDEMSQADLVSWNSIVNAYANVGELDTAHDIFNIMLGKTVVSWNVMIYGYLKGNNP 101
Query: 94 NEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAA 153
+L +F+ M ++ ++ MVS++SAC + L + + +L ++S++ ++ +
Sbjct: 102 GCSLMLFRKMVNSGLRGNDKTMVSVLSACGKSARLTEGRSIHGFLIRTSLNFSVI-LLTS 160
Query: 154 LIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLN---EGL 210
L+DM +KC ++ A +F+ M R+L + +MI G IHG + LF +M+N E +
Sbjct: 161 LMDMYSKCQKVELARSIFDSMVHRNLICWNAMILGHCIHGKPADGLDLFAEMVNSTGETI 220
Query: 211 IPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDL 259
+PD + +++AC+ L+ EG+ +F M KY++ P+ HY CM +L
Sbjct: 221 LPDEVTYIGVISACARAGLLTEGRKFFSQMMDKYTIKPNFAHYWCMANL 269
>29676.m001642 pentatricopeptide repeat-containing protein, putative
Length = 507
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 156/274 (56%), Gaps = 4/274 (1%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N ++ K DL++A+K+F++M ERD+ S+ V+I G AK+G + AR LFD P+RD F
Sbjct: 119 NRLLDMYAKCNDLVDAQKLFEEMGERDLCSWNVLISGCAKMGLLKEARKLFDTMPERDNF 178
Query: 79 LWSVLISGYAQNGLPNEALKIFQGM-ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY 137
W+ +ISGY ++ P+EAL++++ M + N+ +++ + S+++A + + L + K + Y
Sbjct: 179 SWTAMISGYVRHNRPHEALELYRLMKKCENLTSNKFTVSSVLAAAAAIPCLRIGKEIHGY 238
Query: 138 LSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQ 197
+ ++ +D + V +AL DM KCG+++ A +F++M RD+ ++ +MI G E+
Sbjct: 239 IMRTGLDSDEV-VWSALSDMYGKCGSIEEARHIFDKMVNRDVVTWTAMIDRYFEDGRREE 297
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMV 257
LF ++L G+ P++ F +L AC+ + GK M ++ P + +V
Sbjct: 298 GFELFAELLRSGIKPNDFTFAGVLNACADLGVEGIGKQVHGHM-TRADFDPFSFAASALV 356
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
+ S+ G + A + + MP + +W +L+
Sbjct: 357 HMYSKCGNMVNAERVFRGMP-QPDLVSWTSLIAG 389
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 139/283 (49%), Gaps = 41/283 (14%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP-------------------- 42
A+++F MPER+ SW AM+ G V+ A +++ M
Sbjct: 165 ARKLFDTMPERDNFSWTAMISGYVRHNRPHEALELYRLMKKCENLTSNKFTVSSVLAAAA 224
Query: 43 --------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+ D V ++ + D Y K G I AR +FDK RD W+
Sbjct: 225 AIPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVNRDVVTWTA 284
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+I Y ++G E ++F + +KP+++ +++AC+ +G + K V +++++
Sbjct: 285 MIDRYFEDGRREEGFELFAELLRSGIKPNDFTFAGVLNACADLGVEGIGKQVHGHMTRAD 344
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
D + +AL+ M +KCGNM A ++F MP+ DL S+ S+I G + +G+ ++A+ F
Sbjct: 345 FD-PFSFAASALVHMYSKCGNMVNAERVFRGMPQPDLVSWTSLIAGYAQNGHPDEALQYF 403
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYS 245
+L G PD+ F +L+AC+H LV++G YF ++ K +
Sbjct: 404 ELLLKSGTRPDHITFVGVLSACAHAGLVDKGLQYFHSIMDKLT 446
>29813.m001482 pentatricopeptide repeat-containing protein, putative
Length = 556
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 135/280 (48%), Gaps = 42/280 (15%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDG- 55
D R+F +M RN+ SW ++ + G NA + F M E V +F +I G
Sbjct: 268 DYGSRLFEKMTIRNVVSWTMIITTYTQSGQEENALRAFIRMQEIGVSPNDFTFAAVISGC 327
Query: 56 ----------------------------------YAKVGDIASARALFDKAPKRDAFLWS 81
Y+K G + SA +F + +RD WS
Sbjct: 328 ANLGKTEWGEQLHGHMLCLGLMTFLSVANSVITLYSKCGQLKSASMVFKELTRRDVVSWS 387
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I+GY+Q G EA + M KP+E + S++S C + L+ K + +
Sbjct: 388 TIIAGYSQGGCAEEAFEYLSRMRREGPKPNELTLASVLSVCGNMAILEQGKQLHAHALH- 446
Query: 142 SIDIGQTHVV-AALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
+ + QT ++ +ALI+M +KCG++ A+K+F+E D+ S+ +MI G + HG ++A+
Sbjct: 447 -VGLEQTAMIQSALINMYSKCGSIKEASKIFDEAENNDIVSWTAMINGYAEHGCRQEAID 505
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
LF K+ GL PD F +LTACSH LV+ G HYF +M
Sbjct: 506 LFEKIPRIGLKPDPVTFIGVLTACSHAGLVDLGFHYFNSM 545
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 141/312 (45%), Gaps = 49/312 (15%)
Query: 5 RVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV--SFTVMI--------- 53
++F MP RN+ SW A++ G V G F M VV S+T I
Sbjct: 171 QIFHAMPIRNVVSWTAIITGFVHAGYSKEGLVYFSQMWRSKVVCDSYTFAIALKACANLG 230
Query: 54 ----------------------------DGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
Y K G + LF+K R+ W+++I+
Sbjct: 231 ALDHGRQIHCQALKRSLEASSFVANTLATMYNKCGKLDYGSRLFEKMTIRNVVSWTMIIT 290
Query: 86 GYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI 145
Y Q+G AL+ F M+ + V P+++ +++S C+ +G + + + ++ + +
Sbjct: 291 TYTQSGQEENALRAFIRMQEIGVSPNDFTFAAVISGCANLGKTEWGEQLHGHMLCLGL-M 349
Query: 146 GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM 205
V ++I + +KCG + A+ +F+E+ +RD+ S+ ++I G S G AE+A ++M
Sbjct: 350 TFLSVANSVITLYSKCGQLKSASMVFKELTRRDVVSWSTIIAGYSQGGCAEEAFEYLSRM 409
Query: 206 LNEGLIPDNAAFTVILTACSHGRLVEEGK----HYFETMKSKYSMVPSPEHYACMVDLLS 261
EG P+ +L+ C + ++E+GK H + +M+ S ++++ S
Sbjct: 410 RREGPKPNELTLASVLSVCGNMAILEQGKQLHAHALHVGLEQTAMIQSA-----LINMYS 464
Query: 262 RSGQLKEAYELL 273
+ G +KEA ++
Sbjct: 465 KCGSIKEASKIF 476
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 135/334 (40%), Gaps = 73/334 (21%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK-- 71
N+ N+ + LVK G L +AR++FD+MP RD +S+T +I GY D A LF K
Sbjct: 47 NMLEINSKLKALVKTGCLQDARQMFDEMPHRDEISWTTIISGYVNAIDTTEALTLFSKMW 106
Query: 72 ---APKRDAFLWSVL--ISGYAQNGLPNEAL---------------------------KI 99
+ D F+ S+ I G + N E+L KI
Sbjct: 107 VVPGLRMDPFILSLALKICGLSLNESYGESLHGYSVKSDFVDSVFVGSALVDMYMKFDKI 166
Query: 100 FQGMELMNVKP-------------------------------------DEYIMVSLMSAC 122
QG ++ + P D Y + AC
Sbjct: 167 QQGCQIFHAMPIRNVVSWTAIITGFVHAGYSKEGLVYFSQMWRSKVVCDSYTFAIALKAC 226
Query: 123 SQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSY 182
+ +G LD + + C + S++ + V L M KCG +D ++LFE+M R++ S+
Sbjct: 227 ANLGALDHGRQIHCQALKRSLE-ASSFVANTLATMYNKCGKLDYGSRLFEKMTIRNVVSW 285
Query: 183 CSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKS 242
+I + G E A+ F +M G+ P++ F +++ C++ E G+ M
Sbjct: 286 TMIITTYTQSGQEENALRAFIRMQEIGVSPNDFTFAAVISGCANLGKTEWGEQLHGHMLC 345
Query: 243 KYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
++ ++ L S+ GQLK A + K +
Sbjct: 346 -LGLMTFLSVANSVITLYSKCGQLKSASMVFKEL 378
>29950.m001146 pentatricopeptide repeat-containing protein, putative
Length = 878
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 40/292 (13%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDG- 55
D A+ + ++ E ++ SW A++ G + A +FD+M R D + F+ I
Sbjct: 544 DIARGILRRLNEEDVVSWTALIAGYTQHDLFTEALNLFDEMLNRGIQSDNIGFSSAISAC 603
Query: 56 ----------------------------------YAKVGDIASARALFDKAPKRDAFLWS 81
YA+ G I A F+K +D+ W+
Sbjct: 604 AGIQALSQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRIQEANLAFEKIDAKDSISWN 663
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
L+SG+AQ+G EALKIF M N+K + S +SA + + N+ K + + ++
Sbjct: 664 ALMSGFAQSGYCEEALKIFAQMTRANIKASLFTFGSAVSAAANMANIKQGKQIHAMIMKT 723
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
D + V ALI + AKCG +D A + F E+P+++ S+ +MI G S HG +AV L
Sbjct: 724 GFD-SEIEVSNALITLYAKCGCIDGAKREFFEIPEKNEISWNAMITGYSQHGCGIEAVNL 782
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHY 253
F KM G P++ F +++ACSH LV EG YFE+M ++ ++ E +
Sbjct: 783 FQKMKQVGAKPNHVTFVGVISACSHVGLVNEGLAYFESMSKEHGLIIGLEDF 834
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 156/335 (46%), Gaps = 46/335 (13%)
Query: 5 RVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV------------------ 46
+VF MP R+L +WN ++ GLV +F M E +V
Sbjct: 143 KVFDDMPSRSLMTWNKVLSGLVANKTSNRVLGLFAQMVEENVNPNEVTVASVLRAYGSGN 202
Query: 47 ----------------------VSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLI 84
++ +ID YAK G I SAR +FD+ +D+ W +I
Sbjct: 203 VAFYYVEQIHASIISRGLGTSSIACNPLIDLYAKNGFIRSARKVFDELCMKDSVSWVAVI 262
Query: 85 SGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
S Y+QNG EA+++F M + + P Y+ S++SAC+++ D+ + + + +
Sbjct: 263 SSYSQNGFGEEAIRLFCEMHISGLSPTPYVFSSVLSACAKIELFDIGEQLHALVFKCGFF 322
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
+ +T+V AL+ + ++ GN A ++F ++ +D SY S+I GLS G +++A+ LF K
Sbjct: 323 L-ETYVCNALVTLYSRLGNFISAQQVFSKIKCKDEVSYNSLISGLSQQGCSDRALELFKK 381
Query: 205 MLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSG 264
M + L PD +L+AC+ + + +G+ + K M ++DL +
Sbjct: 382 MQLDHLKPDCVTVASLLSACASIKSLSKGEQ-LHSYAIKAGMCLDIIIEGSLLDLYVKCS 440
Query: 265 QLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
+ A++ + E + W +L A YG+++
Sbjct: 441 DITTAHKFFATTQTE-NVVLWNVMLVA---YGQLD 471
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 156/328 (47%), Gaps = 44/328 (13%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PE------------ 43
+A++VF ++ ++ S+N+++ GL + G A ++F M P+
Sbjct: 343 SAQQVFSKIKCKDEVSYNSLISGLSQQGCSDRALELFKKMQLDHLKPDCVTVASLLSACA 402
Query: 44 ---------------------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
D++ ++D Y K DI +A F + LW+V
Sbjct: 403 SIKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDITTAHKFFATTQTENVVLWNV 462
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
++ Y Q +++ IF+ M++ + P+++ S++ C+ G LDL + + ++
Sbjct: 463 MLVAYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSILRTCTSFGALDLGEQIHSQAIKTG 522
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ +V + LIDM AK G +D A + + + D+ S+ ++I G + H +A+ LF
Sbjct: 523 FEF-NVYVCSVLIDMYAKLGKLDIARGILRRLNEEDVVSWTALIAGYTQHDLFTEALNLF 581
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH-YFETMKSKYSMVPSPEHYACMVDLLS 261
++MLN G+ DN F+ ++AC+ + + +G+ + ++ S YS S + +V L +
Sbjct: 582 DEMLNRGIQSDNIGFSSAISACAGIQALSQGQQIHAQSYISGYSEDLSIGN--ALVSLYA 639
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALL 289
R G+++EA + + + S W AL+
Sbjct: 640 RCGRIQEANLAFEKIDAKDSIS-WNALM 666
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 113/236 (47%), Gaps = 9/236 (3%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I+ Y VGD+ S +FD P R W+ ++SG N N L +F M NV P+
Sbjct: 128 LIEFYFAVGDLNSVVKVFDDMPSRSLMTWNKVLSGLVANKTSNRVLGLFAQMVEENVNPN 187
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA-ALIDMNAKCGNMDRANKL 170
E + S++ A GN+ + S S +G + + LID+ AK G + A K+
Sbjct: 188 EVTVASVLRAYGS-GNVAFYYVEQIHASIISRGLGTSSIACNPLIDLYAKNGFIRSARKV 246
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLV 230
F+E+ +D S+ ++I S +G+ E+A+ LF +M GL P F+ +L+AC+ L
Sbjct: 247 FDELCMKDSVSWVAVISSYSQNGFGEEAIRLFCEMHISGLSPTPYVFSSVLSACAKIELF 306
Query: 231 EEGKHYFE-TMKSKYSMVPSPEHYAC--MVDLLSRSGQLKEAYELLKSMPVESHAS 283
+ G+ K + + E Y C +V L SR G A ++ + + S
Sbjct: 307 DIGEQLHALVFKCGFFL----ETYVCNALVTLYSRLGNFISAQQVFSKIKCKDEVS 358
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 122/249 (48%), Gaps = 7/249 (2%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
E +V +V+ID YAK+G + AR + + + D W+ LI+GY Q+ L EAL +F
Sbjct: 524 EFNVYVCSVLIDMYAKLGKLDIARGILRRLNEEDVVSWTALIAGYTQHDLFTEALNLFDE 583
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWV--DCYLSQSSIDIGQTHVVAALIDMNAK 160
M ++ D S +SAC+ + L + + Y+S S D+ + AL+ + A+
Sbjct: 584 MLNRGIQSDNIGFSSAISACAGIQALSQGQQIHAQSYISGYSEDLS---IGNALVSLYAR 640
Query: 161 CGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVI 220
CG + AN FE++ +D S+ +++ G + GY E+A+ +F +M + F
Sbjct: 641 CGRIQEANLAFEKIDAKDSISWNALMSGFAQSGYCEEALKIFAQMTRANIKASLFTFGSA 700
Query: 221 LTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVES 280
++A ++ +++GK M K E ++ L ++ G + A +P E
Sbjct: 701 VSAAANMANIKQGKQ-IHAMIMKTGFDSEIEVSNALITLYAKCGCIDGAKREFFEIP-EK 758
Query: 281 HASAWGALL 289
+ +W A++
Sbjct: 759 NEISWNAMI 767
>29724.m000862 pentatricopeptide repeat-containing protein, putative
Length = 525
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 157/297 (52%), Gaps = 17/297 (5%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A+R+F QMP +N+ SWNAM+ V+ + A K+F++MP+RD VS+T MI+GY + G +
Sbjct: 214 ARRLFDQMPSKNVVSWNAMISAYVQSRQIDEAEKLFEEMPKRDSVSWTTMINGYVRAGKL 273
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
AR K P ++ + +ISGY + +EA +IF + PD ++++
Sbjct: 274 DEARKTLSKLPYKNIAAQTAMISGYIKYNKIDEARQIFNEIG----TPDMVCFNTMLAGY 329
Query: 123 SQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSY 182
+Q G +D A + + + I T V A A+ G M+RA K+F+EM +R+L S+
Sbjct: 330 TQCGRVDEAIHLFEQMVKKDIVSWNTMVAAY-----AQVGQMERALKVFKEMGERNLVSW 384
Query: 183 CSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH-YFETMK 241
S+I G +HG A+ F M +EG PD + F L++C+ ++ G+ + +K
Sbjct: 385 NSLISGFMLHGMYLDALWCFVLMQHEGKKPDQSTFACALSSCAIVAALQVGRQLHHLVIK 444
Query: 242 SKYSMVPSPEHYAC--MVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYG 296
S Y + + C ++ + ++ G++ EA + K + + +W +L+G G
Sbjct: 445 SGY----INDLFVCNALITMYAKCGKILEAKLVFKGI-CNADVVSWNSLIGGYALNG 496
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 150/297 (50%), Gaps = 21/297 (7%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
D+AKR+F +MP +N+ SWN+M+ G + G + A ++F +M ERDVVS+ +M+DG+ ++G
Sbjct: 119 DDAKRLFNEMPVKNIVSWNSMLAGYTQNGQMSLALQLFHEMLERDVVSWNLMVDGFVELG 178
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
D+ SA F K P+ + W ++ G+A+ G EA ++F M NV +++S
Sbjct: 179 DLDSAWEFFKKVPEPNIVSWVTMLYGFARKGKLLEARRLFDQMPSKNVVSWN----AMIS 234
Query: 121 ACSQVGNLDLA-KWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDL 179
A Q +D A K + + S+ +I+ + G +D A K ++P +++
Sbjct: 235 AYVQSRQIDEAEKLFEEMPKRDSVSW------TTMINGYVRAGKLDEARKTLSKLPYKNI 288
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFET 239
+ +MI G + ++A +FN++ PD F +L + V+E H FE
Sbjct: 289 AAQTAMISGYIKYNKIDEARQIFNEIGT----PDMVCFNTMLAGYTQCGRVDEAIHLFEQ 344
Query: 240 MKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYG 296
M K + MV ++ GQ++ A ++ K M E + +W +L+ +G
Sbjct: 345 MVKK-----DIVSWNTMVAAYAQVGQMERALKVFKEMG-ERNLVSWNSLISGFMLHG 395
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 160/296 (54%), Gaps = 21/296 (7%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGD 61
+A+ +F +MP RNL SWN M+ G + + A ++F MP RD+ S+T+MI Y + G
Sbjct: 24 DARVLFDKMPCRNLVSWNTMIAGYLHNNKVDEAYELFVKMPRRDLFSWTLMITCYTQNGM 83
Query: 62 IASARALFDKAP---KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSL 118
+ A+ L + P K+DA W+ +ISGY++ G ++A ++F M + N+ S+
Sbjct: 84 LEKAKQLLNSLPCNYKKDAACWNAMISGYSREGRYDDAKRLFNEMPVKNIVSWN----SM 139
Query: 119 MSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRD 178
++ +Q G + LA + + D+ ++ ++D + G++D A + F+++P+ +
Sbjct: 140 LAGYTQNGQMSLA--LQLFHEMLERDVVSWNL---MVDGFVELGDLDSAWEFFKKVPEPN 194
Query: 179 LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE 238
+ S+ +M+ G + G +A LF++M ++ ++ NA +++A R ++E + FE
Sbjct: 195 IVSWVTMLYGFARKGKLLEARRLFDQMPSKNVVSWNA----MISAYVQSRQIDEAEKLFE 250
Query: 239 TMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKF 294
M + S+ + M++ R+G+L EA + L +P ++ A+ + G K+
Sbjct: 251 EMPKRDSV-----SWTTMINGYVRAGKLDEARKTLSKLPYKNIAAQTAMISGYIKY 301
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 120/217 (55%), Gaps = 1/217 (0%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
D A+++F ++ ++ +N M+ G + G + A +F+ M ++D+VS+ M+ YA+VG
Sbjct: 305 DEARQIFNEIGTPDMVCFNTMLAGYTQCGRVDEAIHLFEQMVKKDIVSWNTMVAAYAQVG 364
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
+ A +F + +R+ W+ LISG+ +G+ +AL F M+ KPD+ +S
Sbjct: 365 QMERALKVFKEMGERNLVSWNSLISGFMLHGMYLDALWCFVLMQHEGKKPDQSTFACALS 424
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
+C+ V L + + + +L S I V ALI M AKCG + A +F+ + D+
Sbjct: 425 SCAIVAALQVGRQLH-HLVIKSGYINDLFVCNALITMYAKCGKILEAKLVFKGICNADVV 483
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAF 217
S+ S+I G +++G E+A+ LF +M G++PD F
Sbjct: 484 SWNSLIGGYALNGCGEEALTLFEEMKLAGVVPDQVTF 520
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 39/157 (24%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PER---------- 44
+ A +VF +M ERNL SWN+++ G + G ++A F M P++
Sbjct: 367 ERALKVFKEMGERNLVSWNSLISGFMLHGMYLDALWCFVLMQHEGKKPDQSTFACALSSC 426
Query: 45 -----------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
D+ +I YAK G I A+ +F D W+
Sbjct: 427 AIVAALQVGRQLHHLVIKSGYINDLFVCNALITMYAKCGKILEAKLVFKGICNADVVSWN 486
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSL 118
LI GYA NG EAL +F+ M+L V PD+ + +
Sbjct: 487 SLIGGYALNGCGEEALTLFEEMKLAGVVPDQVTFIGV 523
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 115/271 (42%), Gaps = 43/271 (15%)
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACS---------Q 124
+R+ ++ +IS YA+NG +A +F M N+ ++ + +
Sbjct: 3 QRNTVTYNSMISAYAKNGRVIDARVLFDKMPCRNLVSWNTMIAGYLHNNKVDEAYELFVK 62
Query: 125 VGNLDLAKW---VDCYLSQSSIDIGQTHVVA-------------ALIDMNAKCGNMDRAN 168
+ DL W + CY ++ + + + A+I ++ G D A
Sbjct: 63 MPRRDLFSWTLMITCYTQNGMLEKAKQLLNSLPCNYKKDAACWNAMISGYSREGRYDDAK 122
Query: 169 KLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGR 228
+LF EMP +++ S+ SM+ G + +G A+ LF++ML ++ N
Sbjct: 123 RLFNEMPVKNIVSWNSMLAGYTQNGQMSLALQLFHEMLERDVVSWNLMVD---------G 173
Query: 229 LVEEGKHYFETMKSKYSMVPSPE--HYACMVDLLSRSGQLKEAYELLKSMPVESHASAWG 286
VE G ++ + VP P + M+ +R G+L EA L MP ++ S W
Sbjct: 174 FVELGD--LDSAWEFFKKVPEPNIVSWVTMLYGFARKGKLLEARRLFDQMPSKNVVS-WN 230
Query: 287 ALLGACKFYGEVELGEIVANRLFELEPENSS 317
A++ A + ++ E A +LFE P+ S
Sbjct: 231 AMISA--YVQSRQIDE--AEKLFEEMPKRDS 257
>29631.m001012 pentatricopeptide repeat-containing protein, putative
Length = 483
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 137/260 (52%), Gaps = 7/260 (2%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
+ +ID Y K DI ++ ++++ PKR + L++ +G ++ + +F M +
Sbjct: 196 SALIDMYGKCFDIENSISVYESLPKRTLECCNSLMTSLLHSGFVDDVIDMFGLMVDEGIG 255
Query: 110 PDEYIMVSLMSAC--SQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRA 167
DE+ +++ A S + +L + V C + + + V +LID ++ G ++ +
Sbjct: 256 LDEFTFCTVLKALLESVLVSLASCRLVHCCVIKFGFE-SDISVSCSLIDGYSRSGKVELS 314
Query: 168 NKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHG 227
K+F ++ ++F S+I G + +G + + +F M+ +GL PD F +LT CSH
Sbjct: 315 QKVFSQLSSPNVFCLTSIINGFARNGMGRECLEIFETMIQKGLKPDKVTFLCVLTGCSHS 374
Query: 228 RLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGA 287
LVEEG+ F +M S++ + P EH +CMVDLL R+G L EA ELL+ P W +
Sbjct: 375 GLVEEGRSVFNSMTSRHGICPDREHLSCMVDLLGRAGLLDEAEELLQRTPGRGTCVMWSS 434
Query: 288 LLGACKFYGEVELGEIVANR 307
LL +C+ V E+V R
Sbjct: 435 LLRSCR----VHRNEMVGRR 450
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 156/384 (40%), Gaps = 77/384 (20%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFD----DMPERDVVSFTVMIDG- 55
D A +F ++PERNL WN ++ G + G ++++ D E + +SF +I G
Sbjct: 5 DWALGLFDELPERNLAIWNVVLRGFCELGRFDELLRIYNETKLDNLELNGLSFCYLIRGC 64
Query: 56 -----------------------------------YAKVGDIASARALFDKAPKRDAFLW 80
Y+ G + A+ F P D W
Sbjct: 65 CNKTFFNEGRQLHCHVIKVGWVNSNIFVANALVDFYSACGSLNDAKISFQAIPLEDVISW 124
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ ++S A NGL +AL++F M+ KP V ++ S G++ K + C + +
Sbjct: 125 NSILSVCADNGLHFDALELFYMMQFWGKKPSIRSFVGFLNLSSMNGDIVFGKQIHCCVVK 184
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
G HV +ALIDM KC +++ + ++E +PKR L S++ L G+ + +
Sbjct: 185 LGFYNGSVHVQSALIDMYGKCFDIENSISVYESLPKRTLECCNSLMTSLLHSGFVDDVID 244
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEG----------KHYFET----------- 239
+F M++EG+ D F +L A LV K FE+
Sbjct: 245 MFGLMVDEGIGLDEFTFCTVLKALLESVLVSLASCRLVHCCVIKFGFESDISVSCSLIDG 304
Query: 240 ---------MKSKYSMVPSPEHYACMVDLL---SRSGQLKEAYELLKSM---PVESHASA 284
+ +S + SP + C+ ++ +R+G +E E+ ++M ++
Sbjct: 305 YSRSGKVELSQKVFSQLSSPNVF-CLTSIINGFARNGMGRECLEIFETMIQKGLKPDKVT 363
Query: 285 WGALLGACKFYGEVELGEIVANRL 308
+ +L C G VE G V N +
Sbjct: 364 FLCVLTGCSHSGLVEEGRSVFNSM 387
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
E D+ +IDGY++ G + ++ +F + + F + +I+G+A+NG+ E L+IF+
Sbjct: 292 ESDISVSCSLIDGYSRSGKVELSQKVFSQLSSPNVFCLTSIINGFARNGMGRECLEIFET 351
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWV-DCYLSQSSIDIGQTHVVAALIDMNAKC 161
M +KPD+ + +++ CS G ++ + V + S+ I + H ++ ++D+ +
Sbjct: 352 MIQKGLKPDKVTFLCVLTGCSHSGLVEEGRSVFNSMTSRHGICPDREH-LSCMVDLLGRA 410
Query: 162 GNMDRANKLFEEMPKR-DLFSYCSMIQGLSIH 192
G +D A +L + P R + S+++ +H
Sbjct: 411 GLLDEAEELLQRTPGRGTCVMWSSLLRSCRVH 442
>29634.m002120 pentatricopeptide repeat-containing protein, putative
Length = 338
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 125/203 (61%), Gaps = 5/203 (2%)
Query: 1 DNAKRVFVQMPE----RNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGY 56
+ A++V Q+ + ++ + N+++ G + +AR +FD +P D VS+ +IDGY
Sbjct: 128 EKAQQVHAQIIKLGFGSDVYTTNSLLHAYAASGFIESARIIFDRIPHPDTVSWNSIIDGY 187
Query: 57 AKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMV 116
K G+ +A LF P+++A ++V+ISG+ Q GL EAL +FQ M++ +KPD+ ++
Sbjct: 188 VKCGETETAYELFKDMPEKNAISFTVMISGHVQAGLDKEALDLFQEMQIAGIKPDKIVLT 247
Query: 117 SLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK 176
+++SAC+ +G LD +W+ Y+ ++ + I + AL DM AKCG+M A ++F++ K
Sbjct: 248 NVLSACAHLGALDQGRWIHTYIKKNDVQIDPM-LGCALTDMYAKCGSMQDALEVFKKTRK 306
Query: 177 RDLFSYCSMIQGLSIHGYAEQAV 199
+ + + ++I G +IHG +A+
Sbjct: 307 KSVSLWTALIHGFAIHGRGREAL 329
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 127/269 (47%), Gaps = 33/269 (12%)
Query: 60 GDIASARALFDKAPKR-DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSL 118
G++ A+ +FD R + ++W+ ++ GYA + P EAL ++ M +V + Y L
Sbjct: 58 GNLTYAKIVFDSLSSRPNTYIWNAMLRGYADSNKPEEALILYHQMLCHSVPHNGYTFPFL 117
Query: 119 MSACSQVGNLDLAKWV-----------DCYLSQSSID-----------------IGQTHV 150
+ ACS + ++ A+ V D Y + S + I
Sbjct: 118 LKACSSLSAIEKAQQVHAQIIKLGFGSDVYTTNSLLHAYAASGFIESARIIFDRIPHPDT 177
Query: 151 VA--ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE 208
V+ ++ID KCG + A +LF++MP+++ S+ MI G G ++A+ LF +M
Sbjct: 178 VSWNSIIDGYVKCGETETAYELFKDMPEKNAISFTVMISGHVQAGLDKEALDLFQEMQIA 237
Query: 209 GLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKE 268
G+ PD T +L+AC+H +++G+ + T K + P + D+ ++ G +++
Sbjct: 238 GIKPDKIVLTNVLSACAHLGALDQGR-WIHTYIKKNDVQIDPMLGCALTDMYAKCGSMQD 296
Query: 269 AYELLKSMPVESHASAWGALLGACKFYGE 297
A E+ K +S S W AL+ +G
Sbjct: 297 ALEVFKKTRKKS-VSLWTALIHGFAIHGR 324
>30204.m001799 pentatricopeptide repeat-containing protein, putative
Length = 274
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 117/173 (67%), Gaps = 2/173 (1%)
Query: 46 VVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMEL 105
VV + VMIDGY ++GD+A +R LFD P R W+V+ISGYAQNG EA+++F M++
Sbjct: 93 VVLWNVMIDGYVRLGDLAVSRDLFDNMPYRTVVSWNVMISGYAQNGYFKEAIELFHDMQM 152
Query: 106 MNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMD 165
++ P+ +VS++ A S++G L+L KWV Y +++I++ + +ALIDM +KCG+++
Sbjct: 153 DDMSPNYVTLVSVLPAISRLGALELGKWVHLYAEKNNIEVNDV-LGSALIDMYSKCGSIE 211
Query: 166 RANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAF 217
+A ++FE + K ++ ++ ++I GL++HG A+ A+ + +M G+ P + +
Sbjct: 212 KATQVFESIHNKMNVVTWSAIIGGLAMHGRAKDALDYYRRMQEAGVTPSDVVY 264
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 76/146 (52%), Gaps = 1/146 (0%)
Query: 154 LIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPD 213
+ID + G++ + LF+ MP R + S+ MI G + +GY ++A+ LF+ M + + P+
Sbjct: 99 MIDGYVRLGDLAVSRDLFDNMPYRTVVSWNVMISGYAQNGYFKEAIELFHDMQMDDMSPN 158
Query: 214 NAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELL 273
+L A S +E GK + K ++ + + ++D+ S+ G +++A ++
Sbjct: 159 YVTLVSVLPAISRLGALELGK-WVHLYAEKNNIEVNDVLGSALIDMYSKCGSIEKATQVF 217
Query: 274 KSMPVESHASAWGALLGACKFYGEVE 299
+S+ + + W A++G +G +
Sbjct: 218 ESIHNKMNVVTWSAIIGGLAMHGRAK 243
>30138.m003882 pentatricopeptide repeat-containing protein, putative
Length = 515
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 140/287 (48%), Gaps = 40/287 (13%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------------------- 41
+++KR+F M ER+ SW M+ GLV+ G A F M
Sbjct: 224 EDSKRLFHGMKERDNISWTTMITGLVQNGLEEEAIDFFRQMRLDGIGMDQYTFGSVLTAC 283
Query: 42 -------PERDVVSFTV-------------MIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ V +F + ++D Y K + A A+F + ++ W+
Sbjct: 284 GGLTALREGKQVHAFIIRSDCTDNVFVGSALVDMYCKCKILRYAEAVFKRMKYKNVVSWT 343
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
++ GY QNG EA+K+F M+ ++PD++ + S++S+C+ + +L+ C S
Sbjct: 344 AILVGYGQNGFSEEAVKVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVS 403
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ I V AL+ + KCG+++ +++LF EM RD S+ ++I G + G A + + L
Sbjct: 404 GL-ISSITVSNALVTLYGKCGSIEDSDRLFNEMNFRDEVSWTALISGYAQFGKARETIEL 462
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVP 248
F +ML GL PD F +L ACS LV G+ +F++M +Y ++P
Sbjct: 463 FERMLAHGLKPDAVTFIGVLLACSRAGLVARGQQFFDSMLEEYGIIP 509
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 139/271 (51%), Gaps = 3/271 (1%)
Query: 27 KGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
K G + A+KVFD+MP+R+VV MI G K G + ++ LF +RD W+ +I+G
Sbjct: 188 KTGLVYEAKKVFDEMPDRNVVMHNTMITGLLKFGMMEDSKRLFHGMKERDNISWTTMITG 247
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG 146
QNGL EA+ F+ M L + D+Y S+++AC + L K V ++ +S
Sbjct: 248 LVQNGLEEEAIDFFRQMRLDGIGMDQYTFGSVLTACGGLTALREGKQVHAFIIRSDC-TD 306
Query: 147 QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
V +AL+DM KC + A +F+ M +++ S+ +++ G +G++E+AV +F M
Sbjct: 307 NVFVGSALVDMYCKCKILRYAEAVFKRMKYKNVVSWTAILVGYGQNGFSEEAVKVFCDMQ 366
Query: 207 NEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQL 266
G+ PD+ ++++C++ +EEG F ++ S +V L + G +
Sbjct: 367 RNGIEPDDFTLGSVISSCANLASLEEGAQ-FHCRALVSGLISSITVSNALVTLYGKCGSI 425
Query: 267 KEAYELLKSMPVESHASAWGALLGACKFYGE 297
+++ L M S W AL+ +G+
Sbjct: 426 EDSDRLFNEMNFRDEVS-WTALISGYAQFGK 455
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 112/225 (49%), Gaps = 6/225 (2%)
Query: 18 WNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDA 77
+N ++ K G++ AR +FD MP+R+ S+ ++ Y+K G + + +F P RD
Sbjct: 46 YNNLMNAYGKLGNIAYARHLFDGMPQRNSFSWNTILSAYSKSGHLPKMKEIFSLMPNRDG 105
Query: 78 FLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNL-DLAKWVDC 136
W+ ++SGYA G ++A+K + M V I S M + L DL + +
Sbjct: 106 VSWNTILSGYASYGSVSDAVKAYNSMMRDGVFNLNRITFSTMLILASSRELVDLGRQIHG 165
Query: 137 YLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAE 196
++ + G V + L+DM AK G + A K+F+EMP R++ + +MI GL G E
Sbjct: 166 HIMKFGFG-GYVFVGSPLVDMYAKTGLVYEAKKVFDEMPDRNVVMHNTMITGLLKFGMME 224
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
+ LF+ M DN ++T ++T L EE +F M+
Sbjct: 225 DSKRLFHGMKER----DNISWTTMITGLVQNGLEEEAIDFFRQMR 265
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 150/339 (44%), Gaps = 25/339 (7%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A+ +F MP+RN SWN ++ K G L +++F MP RD VS+ ++ GYA G +
Sbjct: 62 ARHLFDGMPQRNSFSWNTILSAYSKSGHLPKMKEIFSLMPNRDGVSWNTILSGYASYGSV 121
Query: 63 ASARALFDKAPKRDAF-----LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVS 117
+ A ++ + F +S ++ + L + +I +M Y+ V
Sbjct: 122 SDAVKAYNSMMRDGVFNLNRITFSTMLILASSRELVDLGRQIHG--HIMKFGFGGYVFVG 179
Query: 118 --LMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
L+ ++ G + AK V + ++ + T + L K G M+ + +LF M
Sbjct: 180 SPLVDMYAKTGLVYEAKKVFDEMPDRNVVMHNTMITGLL-----KFGMMEDSKRLFHGMK 234
Query: 176 KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK- 234
+RD S+ +MI GL +G E+A+ F +M +G+ D F +LTAC + EGK
Sbjct: 235 ERDNISWTTMITGLVQNGLEEEAIDFFRQMRLDGIGMDQYTFGSVLTACGGLTALREGKQ 294
Query: 235 -HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACK 293
H F V + +VD+ + L+ A + K M ++ S W A+L
Sbjct: 295 VHAFIIRSDCTDNVFVG---SALVDMYCKCKILRYAEAVFKRMKYKNVVS-WTAILVG-- 348
Query: 294 FYGEVELGEIVANRLFELEPENSSP--YVLLSSIYAAAD 330
YG+ E +++ P + L S I + A+
Sbjct: 349 -YGQNGFSEEAVKVFCDMQRNGIEPDDFTLGSVISSCAN 386
>29889.m003395 pentatricopeptide repeat-containing protein, putative
Length = 396
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 124/213 (58%), Gaps = 1/213 (0%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP 73
++ S N ++ + AR V MPE++ +S+T +I GY++ G + A +F P
Sbjct: 178 HVISLNNLIHMYARFQAFEEARCVLYSMPEQNFISWTTLISGYSQWGLVDEAFRVFQSMP 237
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKW 133
+R++ W+ +I+ Y Q +E+ +F M V D+++ +++SAC+ +G L+ KW
Sbjct: 238 ERNSASWNAMIAAYVQGNRFHESFALFDRMRAEGVVLDKFVAATMLSACTGLGALEQGKW 297
Query: 134 VDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHG 193
+ Y+ + I+ + + A+IDM KCG++++A ++F+ +P + + S+ MI GL++HG
Sbjct: 298 IHGYIEKKGIE-KDSKLATAIIDMYCKCGSLEKALEVFKGLPHKGISSWNCMIGGLAMHG 356
Query: 194 YAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH 226
E A+ LF +M E L PD F +L+AC+H
Sbjct: 357 KGEAAIELFKEMEKEMLAPDRITFVNLLSACAH 389
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 140/309 (45%), Gaps = 41/309 (13%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
++ V++ + + D+A A LFD P DAF ++ +I Y Q+ P ++ ++
Sbjct: 75 DKHVMTQLINFSALSNNRDLAYAIKLFDSIPNPDAFFYNTIIKAYLQHLSPTNSILLYSH 134
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAA--LIDM--- 157
M +V P+++ S++ AC ++ L K + ++ + + G HV++ LI M
Sbjct: 135 MLQHSVFPNDFTFPSVIRACCIHDDIQLGKQIHAHVLK--LGFG-AHVISLNNLIHMYAR 191
Query: 158 -----NAKC-----------------------GNMDRANKLFEEMPKRDLFSYCSMIQGL 189
A+C G +D A ++F+ MP+R+ S+ +MI
Sbjct: 192 FQAFEEARCVLYSMPEQNFISWTTLISGYSQWGLVDEAFRVFQSMPERNSASWNAMIAAY 251
Query: 190 SIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPS 249
++ LF++M EG++ D +L+AC+ +E+GK + K +
Sbjct: 252 VQGNRFHESFALFDRMRAEGVVLDKFVAATMLSACTGLGALEQGK-WIHGYIEKKGIEKD 310
Query: 250 PEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLF 309
+ ++D+ + G L++A E+ K +P + S+W ++G +G+ GE
Sbjct: 311 SKLATAIIDMYCKCGSLEKALEVFKGLPHKG-ISSWNCMIGGLAMHGK---GEAAIELFK 366
Query: 310 ELEPENSSP 318
E+E E +P
Sbjct: 367 EMEKEMLAP 375
>28644.m000920 pentatricopeptide repeat-containing protein, putative
Length = 412
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 121/197 (61%), Gaps = 2/197 (1%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D + T ++D YAK+G++ SA+ +FD+ + W+ LI G+AQ P+EAL +F+ ME
Sbjct: 133 DALLGTTLLDLYAKIGNLDSAQKVFDEMLVKVTASWTALIFGFAQGNKPSEALGLFKRME 192
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
++ +KPDE +++ + ACSQ+G + + ++ +D+ V ALIDM AKCG+
Sbjct: 193 VLGLKPDETTLLAALCACSQLGASKEGEKIHEFIKNQKLDL-NVRVCNALIDMYAKCGSA 251
Query: 165 DRANKLFEEM-PKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
D+A +FE + P + L ++ +M+ ++HG +A+GLF M EGLIPD ++ +L A
Sbjct: 252 DKAYLVFESLGPNKTLVNWNTMVMAFAMHGDGVKALGLFKHMGQEGLIPDAKSYLAVLCA 311
Query: 224 CSHGRLVEEGKHYFETM 240
C++ VEE K + ++
Sbjct: 312 CNYSGSVEEVKERWTSV 328
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 129/292 (44%), Gaps = 24/292 (8%)
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLS 139
W+ ++ Q+ P ++ + ++ M K D ++ AC++ LA L
Sbjct: 67 WNAILRALIQSTHPIDSFRWYRNMIRGLYKVDALTCTFVLKACARA----LACSESTQLH 122
Query: 140 QSSIDIG---QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAE 196
++ G + L+D+ AK GN+D A K+F+EM + S+ ++I G +
Sbjct: 123 SHTVRKGFAADALLGTTLLDLYAKIGNLDSAQKVFDEMLVKVTASWTALIFGFAQGNKPS 182
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACM 256
+A+GLF +M GL PD L ACS +EG+ E +K++ + + +
Sbjct: 183 EALGLFKRMEVLGLKPDETTLLAALCACSQLGASKEGEKIHEFIKNQ-KLDLNVRVCNAL 241
Query: 257 VDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE------ 310
+D+ ++ G +AY + +S+ W ++ A +G+ + A LF+
Sbjct: 242 IDMYAKCGSADKAYLVFESLGPNKTLVNWNTMVMAFAMHGD----GVKALGLFKHMGQEG 297
Query: 311 LEPENSSPYVLL------SSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
L P+ S +L S+ ++W V ++ M R + K+ G S+I
Sbjct: 298 LIPDAKSYLAVLCACNYSGSVEEVKERWTSVDWLRETMTNRDVEKVVGVSYI 349
>28644.m000922 pentatricopeptide repeat-containing protein, putative
Length = 364
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 138/274 (50%), Gaps = 42/274 (15%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE------------------- 43
A + F Q+ + WNA++ GL++ D I++ K + M
Sbjct: 56 AIKAFYQILTPSTNDWNAVLRGLIQSPDPIDSFKWYKTMIRGSYKVDALTCSFVLKACAR 115
Query: 44 --------------------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
D + T ++D YAK GD+ SA+ +FD+ +D W+ L
Sbjct: 116 VLAFSESTQLHSHIVRKGFVADALLGTTLLDLYAKTGDLDSAQKMFDEMIVKDIASWNAL 175
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
ISG+AQ P+EAL +F+ ME++ KP+E ++ +SACSQ+G + + Y+ +
Sbjct: 176 ISGFAQGNKPSEALGLFKRMEVLGFKPNEITVLGALSACSQLGAFKEGEKIHEYIRSQKL 235
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQAVGLF 202
D+ V A IDM AKCG D+A +FE M + L ++ +MI ++HG ++A+ LF
Sbjct: 236 DM-NVQVCNAAIDMYAKCGFADKAYLVFESMSCGKSLVTWNTMIMAFAMHGDGDKALKLF 294
Query: 203 NKMLNEGLIPDNAAFTVILTACSH-GRLVEEGKH 235
M EG+ PD ++ +L AC+H G+ + GKH
Sbjct: 295 KYMHQEGVSPDAVSYLAVLCACNHSGKEDDNGKH 328
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 116/240 (48%), Gaps = 7/240 (2%)
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLS 139
W+ ++ G Q+ P ++ K ++ M + K D ++ AC++V + + ++
Sbjct: 71 WNAVLRGLIQSPDPIDSFKWYKTMIRGSYKVDALTCSFVLKACARVLAFSESTQLHSHIV 130
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAV 199
+ + + L+D+ AK G++D A K+F+EM +D+ S+ ++I G + +A+
Sbjct: 131 RKGF-VADALLGTTLLDLYAKTGDLDSAQKMFDEMIVKDIASWNALISGFAQGNKPSEAL 189
Query: 200 GLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDL 259
GLF +M G P+ L+ACS +EG+ E ++S+ + + + +D+
Sbjct: 190 GLFKRMEVLGFKPNEITVLGALSACSQLGAFKEGEKIHEYIRSQ-KLDMNVQVCNAAIDM 248
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE-LEPENSSP 318
++ G +AY + +SM W ++ A +G+ + A +LF+ + E SP
Sbjct: 249 YAKCGFADKAYLVFESMSCGKSLVTWNTMIMAFAMHGDGD----KALKLFKYMHQEGVSP 304
>30147.m014512 pentatricopeptide repeat-containing protein, putative
Length = 538
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 141/297 (47%), Gaps = 44/297 (14%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----------------- 44
+A++ F +MPERNL SWN ++ GLV GD A ++F M E
Sbjct: 223 HARKWFDEMPERNLVSWNTIISGLVDMGDYKEAFRLFLIMWEEFSDAGSRTFATMIQASA 282
Query: 45 ----------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
D+ +ID Y K G I A +FD+ P+R+ W+
Sbjct: 283 GLGWISIGRQLHSCALKMEVGDDIFVSCALIDMYGKCGSIEDAHCVFDEMPERNIVAWNT 342
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+I+GYA +G EAL + M V+ D + ++ C+++ +L+ AK L +
Sbjct: 343 IIAGYALHGYSEEALDMVYEMRNSGVRMDHFTFSIVVRICARLASLNYAKQAHASLLRHG 402
Query: 143 IDIGQTHVVA--ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
+ +VA AL+D +K G ++ A +F++MP +++ S+ ++I G HG + A+
Sbjct: 403 FG---SDIVANSALVDFYSKWGRVETARHVFDQMPCKNVISWNALIAGYGNHGKGDDAIE 459
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMV 257
LF +ML E + P++ F +L+ACS+ L E G F +M Y + Y +V
Sbjct: 460 LFEQMLQERIRPNHVTFLAVLSACSYSGLSEHGWEIFRSMDRDYKIYNPKFQYQYLV 516
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 133/273 (48%), Gaps = 36/273 (13%)
Query: 26 VKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
VK G +I+ARK FD+MPER++VS+ +I G +GD A LF +W
Sbjct: 216 VKCGMMIHARKWFDEMPERNLVSWNTIISGLVDMGDYKEAFRLF-------LIMWEEFSD 268
Query: 86 GYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV-DCYLSQSSID 144
++ +++ A + +G + + + + C L D
Sbjct: 269 AGSRT------------------------FATMIQASAGLGWISIGRQLHSCALKMEVGD 304
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
V ALIDM KCG+++ A+ +F+EMP+R++ ++ ++I G ++HGY+E+A+ + +
Sbjct: 305 --DIFVSCALIDMYGKCGSIEDAHCVFDEMPERNIVAWNTIIAGYALHGYSEEALDMVYE 362
Query: 205 MLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSG 264
M N G+ D+ F++++ C+ + K ++ ++ + +VD S+ G
Sbjct: 363 MRNSGVRMDHFTFSIVVRICARLASLNYAKQAHASLL-RHGFGSDIVANSALVDFYSKWG 421
Query: 265 QLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
+++ A + MP ++ S W AL+ +G+
Sbjct: 422 RVETARHVFDQMPCKNVIS-WNALIAGYGNHGK 453
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 101/213 (47%), Gaps = 8/213 (3%)
Query: 90 NGLPNEALKIFQGMEL---MNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG 146
+G EAL++F+ +EL +V Y +L+SAC + ++ K V Y+ + +
Sbjct: 147 HGKYREALELFEILELDGGFDVGSSTY--DALVSACIGLRSIPGVKRVLNYMLSNGFEPD 204
Query: 147 QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
Q ++ ++ + KCG M A K F+EMP+R+L S+ ++I GL G ++A LF M
Sbjct: 205 Q-YMANRVLLVQVKCGMMIHARKWFDEMPERNLVSWNTIISGLVDMGDYKEAFRLFLIMW 263
Query: 207 NEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQL 266
E + F ++ A + + G+ + K + ++D+ + G +
Sbjct: 264 EEFSDAGSRTFATMIQASAGLGWISIGRQ-LHSCALKMEVGDDIFVSCALIDMYGKCGSI 322
Query: 267 KEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
++A+ + MP E + AW ++ +G E
Sbjct: 323 EDAHCVFDEMP-ERNIVAWNTIIAGYALHGYSE 354
>30147.m013753 pentatricopeptide repeat-containing protein, putative
Length = 450
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 143/291 (49%), Gaps = 39/291 (13%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGD 61
+A+++F M R + WN MV V G++ +AR++F+ MPERDVVS+ MI GY KVG+
Sbjct: 171 DARKIFDNMCVRPVEVWNKMVSQYVSFGNVRSARELFEAMPERDVVSWNSMISGYVKVGE 230
Query: 62 IASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSA 121
+ +AR LF+ P+++ W+++I Y G A + + M NV ++ S
Sbjct: 231 VKNARELFEWMPEKNVISWTLMIVLYGDTGDFETARRFLEKMPHRNVVSWNSMISSYTKF 290
Query: 122 CSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS 181
+ LDL + S+ I G T V + S
Sbjct: 291 GKFIEALDLFVQMQ---SEGVIPDGYTFV---------------------------SVLS 320
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
CS L+I+G E A+ +F M GL ++ FT L ACSHG L+EEG+ F +M
Sbjct: 321 ACS---NLAINGRTEDAIKIFYLMQKLGLKLNDFTFTSALFACSHGGLLEEGRRIFYSMD 377
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGAC 292
Y + EH+ C++DLLSR+G+++EA + +E + L G+C
Sbjct: 378 KDYKISSKLEHFGCLIDLLSRNGKVEEA------LLLEGGGKQYCFLGGSC 422
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 24/167 (14%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
+ A+R +MP RN+ SWN+M+ K G I A +F M V+ DGY V
Sbjct: 263 ETARRFLEKMPHRNVVSWNSMISSYTKFGKFIEALDLFVQMQSEGVIP-----DGYTFVS 317
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
+++ S A NG +A+KIF M+ + +K +++ S +
Sbjct: 318 VLSAC-------------------SNLAINGRTEDAIKIFYLMQKLGLKLNDFTFTSALF 358
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRA 167
ACS G L+ + + + + + LID+ ++ G ++ A
Sbjct: 359 ACSHGGLLEEGRRIFYSMDKDYKISSKLEHFGCLIDLLSRNGKVEEA 405
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 103/258 (39%), Gaps = 53/258 (20%)
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
LW+++I GYA NG A+ +F + +KP Y ++++C ++G + K V C +
Sbjct: 74 LWNIMIRGYAFNGPFERAISMFDEIPQRGLKPHNYTYPYVLNSCCEMGIYEKGKRVHCQI 133
Query: 139 SQSSID----IGQT-------------------------------------HVVAALIDM 157
+S + +G + V ++
Sbjct: 134 IKSGFESNFAVGHSLFNMYIKMPAFTDTVFADNYEMIDARKIFDNMCVRPVEVWNKMVSQ 193
Query: 158 NAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAF 217
GN+ A +LFE MP+RD+ S+ SMI G G + A LF M + +I ++
Sbjct: 194 YVSFGNVRSARELFEAMPERDVVSWNSMISGYVKVGEVKNARELFEWMPEKNVI----SW 249
Query: 218 TVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP 277
T+++ E + + E M + + + M+ ++ G+ EA +L M
Sbjct: 250 TLMIVLYGDTGDFETARRFLEKMPHR-----NVVSWNSMISSYTKFGKFIEALDLFVQMQ 304
Query: 278 VES---HASAWGALLGAC 292
E + ++L AC
Sbjct: 305 SEGVIPDGYTFVSVLSAC 322
>30147.m014400 pentatricopeptide repeat-containing protein, putative
Length = 274
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
++V+ ++ID +VG+ A+ +F K P RD W+ LI GY +N EAL+ F+ M
Sbjct: 77 NLVALNLVIDNIMRVGECEIAKKVFYKMPARDVVTWNSLIGGYVKNARFEEALRFFRVML 136
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
+++PD++ S+++AC+++G LD A+WV + Q +++ + +ALIDM +KCG +
Sbjct: 137 GSDIEPDKFTFASVITACARLGALDNAQWVHDLMIQKRVELNCI-LSSALIDMFSKCGRI 195
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
A + FE + + D+ + SMI GL++HG A A+ +F KM E ++PD+ F ILTAC
Sbjct: 196 RTAKETFESVQRSDVSVWNSMINGLAVHGLALDAISVFLKMEVENVLPDSITFIGILTAC 255
Query: 225 SHGRL 229
H L
Sbjct: 256 GHSGL 260
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 39/163 (23%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKG---------------------------------- 28
AK+VF +MP R++ +WN+++GG VK
Sbjct: 97 AKKVFYKMPARDVVTWNSLIGGYVKNARFEEALRFFRVMLGSDIEPDKFTFASVITACAR 156
Query: 29 -GDLINARKVFDDMPERDV----VSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
G L NA+ V D M ++ V + + +ID ++K G I +A+ F+ + D +W+ +
Sbjct: 157 LGALDNAQWVHDLMIQKRVELNCILSSALIDMFSKCGRIRTAKETFESVQRSDVSVWNSM 216
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVG 126
I+G A +GL +A+ +F ME+ NV PD + +++AC G
Sbjct: 217 INGLAVHGLALDAISVFLKMEVENVLPDSITFIGILTACGHSG 259
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 5/165 (3%)
Query: 154 LIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPD 213
+ID + G + A K+F +MP RD+ ++ S+I G + E+A+ F ML + PD
Sbjct: 84 VIDNIMRVGECEIAKKVFYKMPARDVVTWNSLIGGYVKNARFEEALRFFRVMLGSDIEPD 143
Query: 214 NAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELL 273
F ++TAC+ ++ + + M K + A ++D+ S+ G+++ A E
Sbjct: 144 KFTFASVITACARLGALDNAQWVHDLMIQKRVELNCILSSA-LIDMFSKCGRIRTAKETF 202
Query: 274 KSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
+S+ S S W +++ +G L + ++E EN P
Sbjct: 203 ESVQ-RSDVSVWNSMINGLAVHG---LALDAISVFLKMEVENVLP 243
>30147.m013867 pentatricopeptide repeat-containing protein, putative
Length = 441
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 137/245 (55%), Gaps = 3/245 (1%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
+ + +I YA G+I AR +FD +RD F W+ + SGY ++G + +++F+ M
Sbjct: 160 NCIVLNTLIHMYANCGEIEIARNMFDGMSERDIFAWNSMFSGYVKSGYYEDTVRLFEEMR 219
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
+ V ++ ++S+++AC ++ +++L +W+ Y+ + +D ++V AL+DM AKCG +
Sbjct: 220 ELGVGFNDITLISVLAACGRLADVELGEWIAKYVRVNGLD-RNMNLVTALVDMYAKCGEV 278
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
D+A +LF++M RD+ ++ +MI G S ++AV LFN+M L P+ +L+ C
Sbjct: 279 DKARRLFDQMDGRDVVAWSAMISGYSQARRCQEAVDLFNEMQMANLDPNEVTMVSVLSCC 338
Query: 225 SHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASA 284
+ + GK +K K M + +VD + G + A E+ + MPV+ + +
Sbjct: 339 AALGALGTGKWIHLYIKRK-GMNLTVTLGTALVDFYGKCGLVDSAIEVFQLMPVK-NVYS 396
Query: 285 WGALL 289
W AL+
Sbjct: 397 WTALI 401
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 132/251 (52%), Gaps = 40/251 (15%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE------------------- 43
A+ +F M ER++ +WN+M G VK G + ++F++M E
Sbjct: 180 ARNMFDGMSERDIFAWNSMFSGYVKSGYYEDTVRLFEEMRELGVGFNDITLISVLAACGR 239
Query: 44 --------------------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
R++ T ++D YAK G++ AR LFD+ RD WS +
Sbjct: 240 LADVELGEWIAKYVRVNGLDRNMNLVTALVDMYAKCGEVDKARRLFDQMDGRDVVAWSAM 299
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
ISGY+Q EA+ +F M++ N+ P+E MVS++S C+ +G L KW+ Y+ + +
Sbjct: 300 ISGYSQARRCQEAVDLFNEMQMANLDPNEVTMVSVLSCCAALGALGTGKWIHLYIKRKGM 359
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
++ T + AL+D KCG +D A ++F+ MP ++++S+ ++IQGL+ +G ++A+ +
Sbjct: 360 NLTVT-LGTALVDFYGKCGLVDSAIEVFQLMPVKNVYSWTALIQGLANNGQGKRALEYYQ 418
Query: 204 KMLNEGLIPDN 214
M + P++
Sbjct: 419 LMRESNVEPND 429
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 14/258 (5%)
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
A ++FD D+ ++++I + P +AL F+ M V DE+ + ACS+
Sbjct: 79 ALSIFDNIDGPDSSAYNIMIRAFTLKRSPQKALAFFKQMLEEAVAFDEFTFPCTLKACSR 138
Query: 125 VGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCS 184
+ K + + + V+ LI M A CG ++ A +F+ M +RD+F++ S
Sbjct: 139 LRGRKEGKQIHAQIVKYGFG-SNCIVLNTLIHMYANCGEIEIARNMFDGMSERDIFAWNS 197
Query: 185 MIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKY 244
M G GY E V LF +M G+ ++ +L AC VE G+ +KY
Sbjct: 198 MFSGYVKSGYYEDTVRLFEEMRELGVGFNDITLISVLAACGRLADVELGEWI-----AKY 252
Query: 245 SMVPSPEH----YACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVEL 300
V + +VD+ ++ G++ +A L M AW A++ Y +
Sbjct: 253 VRVNGLDRNMNLVTALVDMYAKCGEVDKARRLFDQMD-GRDVVAWSAMISG---YSQARR 308
Query: 301 GEIVANRLFELEPENSSP 318
+ + E++ N P
Sbjct: 309 CQEAVDLFNEMQMANLDP 326
>30170.m014304 pentatricopeptide repeat-containing protein, putative
Length = 390
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 141/287 (49%), Gaps = 41/287 (14%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV-----VSFTVMIDG- 55
+A+ +F ++PE++L SWN+++ G + GDL N VF M + + V+F +I
Sbjct: 96 DAQNLFDELPEKDLVSWNSLISGFSRRGDLDNCLNVFSKMKYQTILKPNEVTFISLISAC 155
Query: 56 ----------------------------------YAKVGDIASARALFDKAPKRDAFLWS 81
Y K G + +A +F++ ++ W+
Sbjct: 156 TDAGALGMGKYVHGFAVKLGTILEVKVVNALICLYGKSGCLDAACRIFEEMQVQNLVSWN 215
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I+ + Q G + L+ F M + D+ +V L+ AC VG L + + Y+
Sbjct: 216 SIIAVHVQRGFAQDGLRYFIVMRRAGIVSDQATLVILLQACESVGLRKLVEAIHGYIFGC 275
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+++ V AL+ + A G + ++K+F EM +D ++ +M+ ++HG ++A+ L
Sbjct: 276 GLNMNLA-VETALLKLYANLGMLSASHKVFREMVNKDAVAWTAMLACYAVHGCGKEAIEL 334
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVP 248
F M+ EG +PD+ FT +L+ACSH LV+EGK+YF+ M Y + P
Sbjct: 335 FELMVREGAVPDHVTFTHLLSACSHSGLVKEGKYYFKVMSEVYRVEP 381
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 132/261 (50%), Gaps = 14/261 (5%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNV-KP 110
+ Y ++G A+ LFD+ P++D W+ LISG+++ G + L +F M+ + KP
Sbjct: 84 FVSAYVRLGCTKDAQNLFDELPEKDLVSWNSLISGFSRRGDLDNCLNVFSKMKYQTILKP 143
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
+E +SL+SAC+ G L + K+V + + I + VV ALI + K G +D A ++
Sbjct: 144 NEVTFISLISACTDAGALGMGKYVHGFAVKLG-TILEVKVVNALICLYGKSGCLDAACRI 202
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH---G 227
FEEM ++L S+ S+I G+A+ + F M G++ D A ++L AC
Sbjct: 203 FEEMQVQNLVSWNSIIAVHVQRGFAQDGLRYFIVMRRAGIVSDQATLVILLQACESVGLR 262
Query: 228 RLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGA 287
+LVE Y +M + E ++ L + G L ++++ + M V A AW A
Sbjct: 263 KLVEAIHGYI--FGCGLNMNLAVE--TALLKLYANLGMLSASHKVFREM-VNKDAVAWTA 317
Query: 288 LLGACKFYG----EVELGEIV 304
+L +G +EL E++
Sbjct: 318 MLACYAVHGCGKEAIELFELM 338
>30147.m014125 pentatricopeptide repeat-containing protein, putative
Length = 954
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 150/316 (47%), Gaps = 45/316 (14%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINA----RKVFDDMPERDVVSFT------- 50
++ +VF Q+P ++ SW +M+ G + G A RK+ + + D +F+
Sbjct: 504 DSYKVFEQIPVKDNISWTSMISGFTEHGHAYQAFELLRKMLTERSKPDQTTFSAILSAAS 563
Query: 51 ----------------------------VMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+++ Y+K G + SAR +FD +D S
Sbjct: 564 SIHSLQKGKEIHGYAYRARLGDEALVGGALVNMYSKCGALESARKMFDLLAVKDQVSCSS 623
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
L+SGYAQNG EAL +F M + N D + + S++ A + + LD + +L +
Sbjct: 624 LVSGYAQNGWLEEALLLFHEMLISNFTIDSFAVSSVLGAIAGLNRLDFGTQLHAHLVKLG 683
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+D V ++L+ + +KCG+++ K F ++ DL S+ +MI + HG +A+ ++
Sbjct: 684 LD-SDVSVGSSLVTVYSKCGSIEDCWKAFNQIDDADLISWTTMIASCAQHGKGVEALKIY 742
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
+M EG+ PD+ F +L+ACSH LVEEG +F +M + + P+ AC R
Sbjct: 743 EQMRREGIRPDSVTFVGVLSACSHANLVEEGYFHFNSMTKDFGLEPNNLDCAC-----RR 797
Query: 263 SGQLKEAYELLKSMPV 278
S E++K + +
Sbjct: 798 SEAHNSTKEIVKGIHI 813
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 158/324 (48%), Gaps = 49/324 (15%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE--RDVVSFTV-------- 51
+A + F +MP RN+ SW A+V G +K D I+A K F +M + + FTV
Sbjct: 304 DAVKEFSRMPVRNVVSWTAIVSGFIKRDDSISALKFFKEMRKMKEETNKFTVTTVISACA 363
Query: 52 -----------------------------MIDGYAKVGDIASARALFDKAPK-RDAFLWS 81
+I+ YAK+ I+S+ +F + ++ +W+
Sbjct: 364 KPHFIKEAIQIHCWILKTGYYLDPVVGAALINMYAKLHAISSSEMVFREMEGVKNPGIWT 423
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
++IS +A+N A+ + + ++PD++ + S++S + +L L + + CY+ ++
Sbjct: 424 IMISSFAKNQDSQSAIDLLLKLLQQGLRPDKFCLSSVLSV---IDSLYLGREIHCYILKT 480
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ + V ++L M +KCG++ + K+FE++P +D S+ SMI G + HG+A QA L
Sbjct: 481 GFVLDLS-VGSSLFTMYSKCGSIGDSYKVFEQIPVKDNISWTSMISGFTEHGHAYQAFEL 539
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHY--ACMVDL 259
KML E PD F+ IL+A S +++GK E Y E +V++
Sbjct: 540 LRKMLTERSKPDQTTFSAILSAASSIHSLQKGK---EIHGYAYRARLGDEALVGGALVNM 596
Query: 260 LSRSGQLKEAYELLKSMPVESHAS 283
S+ G L+ A ++ + V+ S
Sbjct: 597 YSKCGALESARKMFDLLAVKDQVS 620
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 129/253 (50%), Gaps = 25/253 (9%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
Y+K G I + +F++ P +D W+ +ISG+ ++G +A ++ + M KPD+
Sbjct: 496 YSKCGSIGDSYKVFEQIPVKDNISWTSMISGFTEHGHAYQAFELLRKMLTERSKPDQTTF 555
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
+++SA S + +L K + Y ++ + + V AL++M +KCG ++ A K+F+ +
Sbjct: 556 SAILSAASSIHSLQKGKEIHGYAYRARLG-DEALVGGALVNMYSKCGALESARKMFDLLA 614
Query: 176 KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS---------- 225
+D S S++ G + +G+ E+A+ LF++ML D+ A + +L A +
Sbjct: 615 VKDQVSCSSLVSGYAQNGWLEEALLLFHEMLISNFTIDSFAVSSVLGAIAGLNRLDFGTQ 674
Query: 226 -HGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASA 284
H LV+ G + S S+ S +V + S+ G +++ ++ + ++ +
Sbjct: 675 LHAHLVKLG------LDSDVSVGSS------LVTVYSKCGSIEDCWKAFNQID-DADLIS 721
Query: 285 WGALLGACKFYGE 297
W ++ +C +G+
Sbjct: 722 WTTMIASCAQHGK 734
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 138/302 (45%), Gaps = 20/302 (6%)
Query: 11 PERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFD 70
P T++ V+ +I+ + + + V ++D Y K G + A +FD
Sbjct: 50 PFHFFTNYIKSADHTVEETKVIHTHLIKTALFNSNTVVANSLLDWYCKSGALFYALKVFD 109
Query: 71 KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDL 130
P ++ W+V+ISGY +N L ++ + F M P++ ++SAC+ + +L
Sbjct: 110 TIPNKNVISWNVIISGYNRNSLFEDSWRFFSMMHFSGFDPNDITYGCVLSACAALETPNL 169
Query: 131 AKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLS 190
+ V +++ HV A +ID+ A+ G A ++F ++ ++ + S+I G
Sbjct: 170 GEQVYSLATKNGF-YSNGHVRAGMIDLLARNGRFGDALRVFYDVSCENVVCWNSIISGAV 228
Query: 191 IHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK---HYFETMKSKYSMV 247
G A+ +F +M ++P++ F+ ILTAC+ VE GK + +K V
Sbjct: 229 KSGEYWIALDIFYQMSRRFVVPNSFTFSSILTACASLEEVELGKGIQGWVIKCCAKDIFV 288
Query: 248 PSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGAL----------LGACKFYGE 297
+ +V++ ++ G + +A + MPV + S W A+ + A KF+ E
Sbjct: 289 GTA-----IVNMYAKCGDIVDAVKEFSRMPVRNVVS-WTAIVSGFIKRDDSISALKFFKE 342
Query: 298 VE 299
+
Sbjct: 343 MR 344
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 168/364 (46%), Gaps = 47/364 (12%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV--SFT--------- 50
+A RVF + N+ WN+++ G VK G+ A +F M R VV SFT
Sbjct: 204 DALRVFYDVSCENVVCWNSIISGAVKSGEYWIALDIFYQMSRRFVVPNSFTFSSILTACA 263
Query: 51 ---------------------------VMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
+++ YAK GDI A F + P R+ W+ +
Sbjct: 264 SLEEVELGKGIQGWVIKCCAKDIFVGTAIVNMYAKCGDIVDAVKEFSRMPVRNVVSWTAI 323
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
+SG+ + ALK F+ M M + +++ + +++SAC++ + A + C++ ++
Sbjct: 324 VSGFIKRDDSISALKFFKEMRKMKEETNKFTVTTVISACAKPHFIKEAIQIHCWILKTGY 383
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK-RDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ V AALI+M AK + + +F EM ++ + MI + + ++ A+ L
Sbjct: 384 YLDPV-VGAALINMYAKLHAISSSEMVFREMEGVKNPGIWTIMISSFAKNQDSQSAIDLL 442
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
K+L +GL PD + +L+ L E Y +K+ + + S + + + S+
Sbjct: 443 LKLLQQGLRPDKFCLSSVLSVIDSLYLGREIHCYI--LKTGFVLDLSVG--SSLFTMYSK 498
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKFYGEV-ELGEIVANRLFEL-EPENSSPYV 320
G + ++Y++ + +PV+ + S W +++ +G + E++ L E +P+ ++
Sbjct: 499 CGSIGDSYKVFEQIPVKDNIS-WTSMISGFTEHGHAYQAFELLRKMLTERSKPDQTTFSA 557
Query: 321 LLSS 324
+LS+
Sbjct: 558 ILSA 561
>30138.m003853 pentatricopeptide repeat-containing protein, putative
Length = 332
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 178/335 (53%), Gaps = 17/335 (5%)
Query: 27 KGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
K G+L A +F+ MP R+++S ++I+ Y G++ SAR LFD+ P+R+ W+ +++G
Sbjct: 4 KIGELQTALLLFNSMPMRNIMSCNILINAYIHSGELDSARNLFDEMPERNVATWNAVVAG 63
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG 146
Q + E L +F+ M + PDEY + S++ C+ + ++ + V CY+ + +
Sbjct: 64 LIQFEINEEGLNLFRDMYELGFLPDEYTLGSVLRGCAGLKSMYAGRQVHCYVVKCGFEFN 123
Query: 147 QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
V ++L M K G++ ++ + MP R++ ++ ++I G S +G++E+ + L+N M
Sbjct: 124 LV-VGSSLAHMYMKSGSLSEGERVIKSMPSRNIVAWNTLIAGKSQNGHSEEVLDLYNMMR 182
Query: 207 NEGLIPDNAAFTVILTACSHGRLVEEGKH-YFETMKSKYSMVPSPEHYACMVDLLSRSGQ 265
G PD F ++++CS + +G+ + E +K+ S V + + ++ + SR G
Sbjct: 183 IMGFRPDKITFASVISSCSELTTLGQGQQIHAEVIKAGASSVVAVT--SSLISMYSRCGC 240
Query: 266 LKEAYEL-LKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPEN--SSPYVLL 322
L+++ ++ L+ V+ W +++ A F+G GE ++E EN ++ L
Sbjct: 241 LEDSVKVFLECKDVD--VILWSSMIAAYGFHGR---GEEAIKLFHQMEQENLEANDVTFL 295
Query: 323 SSIYAAA-----DQWLDVSHVKNKMKERGLRKLPG 352
S +YA + D+ +++ + + ++ RK G
Sbjct: 296 SLLYACSHCGLKDKGVEIHYRQADNRKETERKSRG 330
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 133/280 (47%), Gaps = 48/280 (17%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE----------------- 43
D+A+ +F +MPERN+ +WNA+V GL++ +F DM E
Sbjct: 40 DSARNLFDEMPERNVATWNAVVAGLIQFEINEEGLNLFRDMYELGFLPDEYTLGSVLRGC 99
Query: 44 ---------RDVVSFTV-------MIDG------YAKVGDIASARALFDKAPKRDAFLWS 81
R V + V ++ G Y K G ++ + P R+ W+
Sbjct: 100 AGLKSMYAGRQVHCYVVKCGFEFNLVVGSSLAHMYMKSGSLSEGERVIKSMPSRNIVAWN 159
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
LI+G +QNG E L ++ M +M +PD+ S++S+CS++ L + + +
Sbjct: 160 TLIAGKSQNGHSEEVLDLYNMMRIMGFRPDKITFASVISSCSELTTLGQGQQIHAEV--- 216
Query: 142 SIDIGQTHVVA---ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
I G + VVA +LI M ++CG ++ + K+F E D+ + SMI HG E+A
Sbjct: 217 -IKAGASSVVAVTSSLISMYSRCGCLEDSVKVFLECKDVDVILWSSMIAAYGFHGRGEEA 275
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--HY 236
+ LF++M E L ++ F +L ACSH L ++G HY
Sbjct: 276 IKLFHQMEQENLEANDVTFLSLLYACSHCGLKDKGVEIHY 315
>30190.m010934 pentatricopeptide repeat-containing protein, putative
Length = 413
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
++ Y+ D+ A LF + P+RD +W+ +ISGYAQN NEAL +F+ M +P+
Sbjct: 189 LVRVYSIFSDLTDAWKLFGEFPERDLSIWTTMISGYAQNFCANEALVLFERMVAEGFEPN 248
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
+ S++S C++ G+LDL + + ++ + ++IG + AL+ M AK G + A KLF
Sbjct: 249 GPTIASVLSVCARSGSLDLGERIHGFMIERGVEIGVI-LGTALVHMYAKNGKILVARKLF 307
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
+ M ++++ ++ +M+ GL+ HG+AE+A+ LF K+ E ++P +A F +L+AC H L++
Sbjct: 308 DSMTEKNVATWNAMLCGLASHGHAEEALSLFWKLEKEHIVPIDATFVGVLSACCHAGLID 367
Query: 232 EGKHYFETMKSKY 244
G+ F +MK Y
Sbjct: 368 VGRRIFYSMKESY 380
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 135/301 (44%), Gaps = 33/301 (10%)
Query: 29 GDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYA 88
+I ++ D ++SF + + DI A LF + F+W+ +I A
Sbjct: 70 AQMILTSRISDHFAASRLLSFCAL----SNSRDINYAIKLFKSIQDPNIFMWNTIIRALA 125
Query: 89 QNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQT 148
+ P++AL + M + V P++Y L+ CS ++ K + ++ + D+
Sbjct: 126 NSSNPDQALFFYIQMLRLGVCPNKYTFPFLLKGCS-FCSIQSCKQIHTHVLKFGSDL-DL 183
Query: 149 HVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE 208
HVV L+ + + ++ A KLF E P+RDL + +MI G + + A +A+ LF +M+ E
Sbjct: 184 HVVNRLVRVYSIFSDLTDAWKLFGEFPERDLSIWTTMISGYAQNFCANEALVLFERMVAE 243
Query: 209 GLIPDNAAFTVILTACS-----------HGRLVEEGKHYFETMKSKYSMVPSPEHYACMV 257
G P+ +L+ C+ HG ++E G + + +V
Sbjct: 244 GFEPNGPTIASVLSVCARSGSLDLGERIHGFMIERGVEIGVILGTA------------LV 291
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSS 317
+ +++G++ A +L SM E + + W A+L +G E + ++LE E+
Sbjct: 292 HMYAKNGKILVARKLFDSM-TEKNVATWNAMLCGLASHGHAEEA---LSLFWKLEKEHIV 347
Query: 318 P 318
P
Sbjct: 348 P 348
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 39/172 (22%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGG-----------------------------------LV 26
+A ++F + PER+L+ W M+ G
Sbjct: 201 DAWKLFGEFPERDLSIWTTMISGYAQNFCANEALVLFERMVAEGFEPNGPTIASVLSVCA 260
Query: 27 KGGDLINARKVFDDMPERDV----VSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+ G L ++ M ER V + T ++ YAK G I AR LFD +++ W+
Sbjct: 261 RSGSLDLGERIHGFMIERGVEIGVILGTALVHMYAKNGKILVARKLFDSMTEKNVATWNA 320
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV 134
++ G A +G EAL +F +E ++ P + V ++SAC G +D+ + +
Sbjct: 321 MLCGLASHGHAEEALSLFWKLEKEHIVPIDATFVGVLSACCHAGLIDVGRRI 372
>29929.m004593 pentatricopeptide repeat-containing protein, putative
Length = 832
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 144/298 (48%), Gaps = 54/298 (18%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTV----- 51
+++ +F + +N+ SWN ++ GL+K G A ++ M E + V+F+V
Sbjct: 465 ESSLELFQSLYFKNIASWNTIIDGLMKNGFETIALELLYKMVESGLGFNSVTFSVALNLV 524
Query: 52 ------------------------------MIDGYAKVGDIASARALFDKAPKR------ 75
++D Y K G + A +F P
Sbjct: 525 SCLVNLELGKQIHGRILRLIIHDNGFIRNSLLDMYCKCGKMEEASRMFRNVPVEISCDDP 584
Query: 76 --DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKW 133
+ WS +ISGY +NG AL+ F M V D++ + S++SAC+ G L+L +
Sbjct: 585 LGEIVSWSSMISGYVRNGEYEYALRTFISMVHEQVLVDKFTLTSVVSACANTGCLELGRQ 644
Query: 134 VDCYLSQSSIDIGQ---THVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLS 190
+ ++ + IG H+ ++LIDM AKCG+++ A +F+E ++ + SMI G +
Sbjct: 645 IHAHI----LKIGHKVDAHLGSSLIDMYAKCGSLNDAQMIFKENDDPNVVLWTSMIFGCA 700
Query: 191 IHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVP 248
+HG +AV +F M+NEG+ P+ F +LTAC+H L+EEG YFE M Y + P
Sbjct: 701 LHGQGREAVRVFKCMMNEGITPNEITFISVLTACNHAGLLEEGCKYFELMPKLYGIKP 758
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 138/287 (48%), Gaps = 11/287 (3%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N+++ VK G A+ +FD M E+ VS+ +MI GY ++GD+ S+ LF ++
Sbjct: 421 NSILDLYVKCGAFDYAKSLFDSMAEKGTVSWNIMIGGYLRMGDVESSLELFQSLYFKNIA 480
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ +I G +NG AL++ M + + ++ S + NL+L K + +
Sbjct: 481 SWNTIIDGLMKNGFETIALELLYKMVESGLGFNSVTFSVALNLVSCLVNLELGKQIHGRI 540
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR--------DLFSYCSMIQGLS 190
+ I + +L+DM KCG M+ A+++F +P ++ S+ SMI G
Sbjct: 541 LRLIIH-DNGFIRNSLLDMYCKCGKMEEASRMFRNVPVEISCDDPLGEIVSWSSMISGYV 599
Query: 191 IHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSP 250
+G E A+ F M++E ++ D T +++AC++ +E G+ + K
Sbjct: 600 RNGEYEYALRTFISMVHEQVLVDKFTLTSVVSACANTGCLELGRQIHAHIL-KIGHKVDA 658
Query: 251 EHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
+ ++D+ ++ G L +A + K + + W +++ C +G+
Sbjct: 659 HLGSSLIDMYAKCGSLNDAQMIFKEND-DPNVVLWTSMIFGCALHGQ 704
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 122/271 (45%), Gaps = 56/271 (20%)
Query: 52 MIDGYAKVG-DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKP 110
++D YAK +++ A LFD+ RD W++LISG+AQ +F+ M+ V P
Sbjct: 321 LLDLYAKNSQNLSHAHKLFDEILCRDVRTWTILISGFAQTRNFKMVSGLFRRMQKEGVCP 380
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
+++ + S++ CS + + K + ++ S I + +++D+ KCG D A L
Sbjct: 381 NQFTLSSVLKCCSSICEIRNGKGIHGWILTSGIGFDIV-LENSILDLYVKCGAFDYAKSL 439
Query: 171 FEEMPKR----------------------DLF---------SYCSMIQGLSIHGYAEQAV 199
F+ M ++ +LF S+ ++I GL +G+ A+
Sbjct: 440 FDSMAEKGTVSWNIMIGGYLRMGDVESSLELFQSLYFKNIASWNTIIDGLMKNGFETIAL 499
Query: 200 GLFNKMLNEGLIPDNAAFTVILTACS-----------HGRLVEEGKHYFETMKSKYSMVP 248
L KM+ GL ++ F+V L S HGR++ H +++
Sbjct: 500 ELLYKMVESGLGFNSVTFSVALNLVSCLVNLELGKQIHGRILRLIIHDNGFIRNS----- 554
Query: 249 SPEHYACMVDLLSRSGQLKEAYELLKSMPVE 279
++D+ + G+++EA + +++PVE
Sbjct: 555 -------LLDMYCKCGKMEEASRMFRNVPVE 578
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 12/169 (7%)
Query: 138 LSQSSIDIGQTH---VVAALIDMNAK-CGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHG 193
L + I IG H + L+D+ AK N+ A+KLF+E+ RD+ ++ +I G +
Sbjct: 302 LHSNVIKIGSFHNLGITNHLLDLYAKNSQNLSHAHKLFDEILCRDVRTWTILISGFAQTR 361
Query: 194 YAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK---HYFETMKSKYSMVPSP 250
+ GLF +M EG+ P+ + +L CS + GK + T + +V
Sbjct: 362 NFKMVSGLFRRMQKEGVCPNQFTLSSVLKCCSSICEIRNGKGIHGWILTSGIGFDIVLEN 421
Query: 251 EHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
++DL + G A L SM E +W ++G G+VE
Sbjct: 422 S----ILDLYVKCGAFDYAKSLFDSMA-EKGTVSWNIMIGGYLRMGDVE 465
>29615.m000493 pentatricopeptide repeat-containing protein, putative
Length = 501
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 126/250 (50%), Gaps = 46/250 (18%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV---------------- 46
A VF ++ +R++ SW +++ G + G I A ++F+ M E +V
Sbjct: 199 ANIVFGRLSDRSIVSWTSIISGYAQNGQPIEALRIFNQMREVNVKPDQIALVSVLRAYTD 258
Query: 47 --------------------------VSFTVMIDGYAKVGDIASARALFDKAPKRDAFLW 80
+S T M YAK G + AR FD+ + LW
Sbjct: 259 VEDLEHGKSIHGCVIKMGLEFEIDLLISLTAM---YAKCGQVMFARLFFDQVRIPNLILW 315
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ +ISGYA+NG EAL++F+ M MN PD + S++ AC+Q+G+L+LA+W+ Y+ +
Sbjct: 316 NAMISGYAKNGYAEEALELFRRMITMNFGPDSITITSVILACAQMGSLELARWMSDYIGR 375
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
S V +ALIDM +KCG++D A +F+ +D+ + SMI G +HG ++++
Sbjct: 376 SEFR-NDAFVSSALIDMFSKCGSVDLARDVFDRALDKDVVLWSSMIMGYGLHGRGQESIN 434
Query: 201 LFNKMLNEGL 210
LF M G+
Sbjct: 435 LFEAMRQAGI 444
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 104/184 (56%), Gaps = 1/184 (0%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
E DV ++ YAK I+ A +F + R W+ +ISGYAQNG P EAL+IF
Sbjct: 177 EADVFVQNGLVTFYAKCRKISLANIVFGRLSDRSIVSWTSIISGYAQNGQPIEALRIFNQ 236
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
M +NVKPD+ +VS++ A + V +L+ K + + + ++ + ++ +L M AKCG
Sbjct: 237 MREVNVKPDQIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLEF-EIDLLISLTAMYAKCG 295
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
+ A F+++ +L + +MI G + +GYAE+A+ LF +M+ PD+ T ++
Sbjct: 296 QVMFARLFFDQVRIPNLILWNAMISGYAKNGYAEEALELFRRMITMNFGPDSITITSVIL 355
Query: 223 ACSH 226
AC+
Sbjct: 356 ACAQ 359
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 95/186 (51%), Gaps = 2/186 (1%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T +++ A +G+I AR +FD P D FLW+ +I Y + L A++++ M++ ++
Sbjct: 82 TKLVNCCATLGEIRYARNVFDYYPDPDVFLWNAIIRCYTRQNLFCNAIEMYARMQIACIR 141
Query: 110 PDEYIMVSLMSACS-QVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
PD + ++ AC+ + LD+ + V + ++ V L+ AKC + AN
Sbjct: 142 PDGFTFPLVLKACTASLAFLDIGRRVHGQAFRHGLE-ADVFVQNGLVTFYAKCRKISLAN 200
Query: 169 KLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGR 228
+F + R + S+ S+I G + +G +A+ +FN+M + PD A +L A +
Sbjct: 201 IVFGRLSDRSIVSWTSIISGYAQNGQPIEALRIFNQMREVNVKPDQIALVSVLRAYTDVE 260
Query: 229 LVEEGK 234
+E GK
Sbjct: 261 DLEHGK 266
>29805.m001533 pentatricopeptide repeat-containing protein, putative
Length = 420
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 136/278 (48%), Gaps = 40/278 (14%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PER------------ 44
A++VF QMP +++ +W A++ G + +A +F M P
Sbjct: 135 ARKVFDQMPVKDVVTWTALITGYSQHDRPKDALLLFPQMLTLGFRPNHFTLSSLLKASGV 194
Query: 45 ---------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
+V + ++D YA+ G + A +FD P R+ W+ L
Sbjct: 195 SPSDSNGRLLHAFCIKYGYSCNVYVGSALLDMYARSGHLEEALFIFDGLPSRNEVSWNAL 254
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I+G A+ G A F M N++P ++ ++SAC+ +G+L+ KWV L +S
Sbjct: 255 IAGCARKGDQELAFSFFSKMLRENIQPTQFTYSIVLSACASIGSLEQGKWVHALLIKSGA 314
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+ V L+ M AK G+++ A K+F+ + KRD+ S+ SM+ G + HG A+ +F
Sbjct: 315 KL-VDFVGNTLLGMYAKSGSIEDARKVFDGLVKRDVVSWNSMLAGYAQHGLGNIALLIFR 373
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
+ML G+ P++ F +LTACSH L+ EG HYF M+
Sbjct: 374 QMLIIGVAPNDITFLCVLTACSHAGLLAEGLHYFNLMR 411
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 154/300 (51%), Gaps = 14/300 (4%)
Query: 5 RVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIAS 64
R + + T +N + G + L+N+R + D+V +++ YAK G++
Sbjct: 81 RTLYHILFKKCTLFNKLKEGQLVHAHLLNSRF------KHDLVIQNTILNMYAKCGNLGE 134
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
AR +FD+ P +D W+ LI+GY+Q+ P +AL +F M + +P+ + + SL+ A
Sbjct: 135 ARKVFDQMPVKDVVTWTALITGYSQHDRPKDALLLFPQMLTLGFRPNHFTLSSLLKASGV 194
Query: 125 VGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCS 184
+ + + + + +V +AL+DM A+ G+++ A +F+ +P R+ S+ +
Sbjct: 195 SPSDSNGRLLHAFCIKYGYSC-NVYVGSALLDMYARSGHLEEALFIFDGLPSRNEVSWNA 253
Query: 185 MIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM-KSK 243
+I G + G E A F+KML E + P ++++L+AC+ +E+GK + KS
Sbjct: 254 LIAGCARKGDQELAFSFFSKMLRENIQPTQFTYSIVLSACASIGSLEQGKWVHALLIKSG 313
Query: 244 YSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEI 303
+V + ++ + ++SG +++A ++ + V+ +W ++L Y + LG I
Sbjct: 314 AKLVDFVGN--TLLGMYAKSGSIEDARKVFDGL-VKRDVVSWNSMLAG---YAQHGLGNI 367
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 39/167 (23%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV--VSFT-------- 50
+ A +F +P RN SWNA++ G + GD A F M ++ FT
Sbjct: 234 EEALFIFDGLPSRNEVSWNALIAGCARKGDQELAFSFFSKMLRENIQPTQFTYSIVLSAC 293
Query: 51 -----------------------------VMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
++ YAK G I AR +FD KRD W+
Sbjct: 294 ASIGSLEQGKWVHALLIKSGAKLVDFVGNTLLGMYAKSGSIEDARKVFDGLVKRDVVSWN 353
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNL 128
+++GYAQ+GL N AL IF+ M ++ V P++ + +++ACS G L
Sbjct: 354 SMLAGYAQHGLGNIALLIFRQMLIIGVAPNDITFLCVLTACSHAGLL 400
>27732.m000283 pentatricopeptide repeat-containing protein, putative
Length = 619
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 140/271 (51%), Gaps = 22/271 (8%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
D AKR+F M +++ SWN+++ G ++ ++ A K+F+ +P +DVVS+T MI G++ G
Sbjct: 270 DEAKRMFQMMNNKDVVSWNSLISGYIQHDEIEEAYKLFEKIPGKDVVSWTTMITGFSAKG 329
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
++ LF P++D W+ +ISG+ NG EA F M VKP+ S+++
Sbjct: 330 NVQKGIQLFKIMPEKDDVAWTAVISGFVSNGEYEEAFLWFIEMLKKAVKPNSLTFSSMLT 389
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
A + + L+ + ++ + + + + +L+ M +KCGN+ A ++F + ++
Sbjct: 390 ASASLATLNQGLQIHAHVEKMDVQFDLS-IRNSLVSMYSKCGNIAEAYQVFTSINAPNII 448
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFT-------VILTACSHG-RLVEE 232
S+ SMI G S +G+ E+A+ LF+KM E P+ F + C+ G R V
Sbjct: 449 SFNSMITGFSQNGHGEEALDLFSKMRKENQEPNEITFLDYLEKRFCLFGICAGGSRNVTN 508
Query: 233 GKH-------------YFETMKSKYSMVPSP 250
G+ Y + +KS++ VP P
Sbjct: 509 GEEKAIAAYSGIFQVPYKDQLKSEFDFVPIP 539
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 144/300 (48%), Gaps = 24/300 (8%)
Query: 1 DNAKRVFVQMPE--RNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAK 58
+ A+ ++ ++P R NAM+ G +K G L A KVF+ E+DVVS++ M+DGY K
Sbjct: 106 EKAENLYREIPAKWREPVCSNAMISGYLKVGRLEEAIKVFEGTVEKDVVSWSSMVDGYCK 165
Query: 59 VGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM-ELMNVKPDEYIMVS 117
G I AR LF+ P R+ W+ +I GY G +F M ++ V P +
Sbjct: 166 KGRIFEARELFNMMPVRNVVTWTSMIDGYMNVGFFENGFSLFLSMRRVIEVNP--LTLTI 223
Query: 118 LMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR 177
+ AC G A V + + + + ++I M + G MD A ++F+ M +
Sbjct: 224 MFEACRHFGRYREAMQVHGLVLRIGFEF-DIFLGNSIIAMYCEFGCMDEAKRMFQMMNNK 282
Query: 178 DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIP--DNAAFTVILTACSHGRLVEEGKH 235
D+ S+ S+I G H E+A LF K IP D ++T ++T S V++G
Sbjct: 283 DVVSWNSLISGYIQHDEIEEAYKLFEK------IPGKDVVSWTTMITGFSAKGNVQKGIQ 336
Query: 236 YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAY----ELLKSMPVESHASAWGALLGA 291
F+ M K + + ++ +G+ +EA+ E+LK V+ ++ + ++L A
Sbjct: 337 LFKIMPEKDDVA-----WTAVISGFVSNGEYEEAFLWFIEMLKK-AVKPNSLTFSSMLTA 390
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 160/346 (46%), Gaps = 46/346 (13%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
+ ++ +F +MP +N+ + +M+ K G + A+K+FD+MPER ++ MI Y +
Sbjct: 12 EESESIFNRMPHKNVITHTSMLTAYAKNGQIAKAKKLFDEMPERTTATYNAMITAYIRNS 71
Query: 61 -DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLM 119
+ A +LF + +R+A + +I+G+ + G+ +A +++ + +P +++
Sbjct: 72 CMVDEAFSLFSRMSERNAVSYGAMITGFLKAGMFEKAENLYREIPAKWREP--VCSNAMI 129
Query: 120 SACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDL 179
S +VG L+ A + + D+ ++++D K G + A +LF MP R++
Sbjct: 130 SGYLKVGRLEEA--IKVFEGTVEKDVVSW---SSMVDGYCKKGRIFEARELFNMMPVRNV 184
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNA-AFTVILTACSH-GRLVEEGKHYF 237
++ SMI G G+ E LF M +I N T++ AC H GR E + +
Sbjct: 185 VTWTSMIDGYMNVGFFENGFSLFLSM--RRVIEVNPLTLTIMFEACRHFGRYREAMQVHG 242
Query: 238 ETMKSKY--------SMVPSPEHYACM------------VDLLS---------RSGQLKE 268
++ + S++ + CM D++S + +++E
Sbjct: 243 LVLRIGFEFDIFLGNSIIAMYCEFGCMDEAKRMFQMMNNKDVVSWNSLISGYIQHDEIEE 302
Query: 269 AYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPE 314
AY+L + +P + S W ++ G V+ G +LF++ PE
Sbjct: 303 AYKLFEKIPGKDVVS-WTTMITGFSAKGNVQKGI----QLFKIMPE 343
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 112/251 (44%), Gaps = 25/251 (9%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM-ELMNVKP 110
MI+ + G+I + ++F++ P ++ + +++ YA+NG +A K+F M E
Sbjct: 1 MINKHGNNGNIEESESIFNRMPHKNVITHTSMLTAYAKNGQIAKAKKLFDEMPERTTATY 60
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQ-SSIDIGQTHVVAALIDMNAKCGNMDRANK 169
+ I + ++C +D A + +S+ +++ G A+I K G ++A
Sbjct: 61 NAMITAYIRNSCM----VDEAFSLFSRMSERNAVSYG------AMITGFLKAGMFEKAEN 110
Query: 170 LFEEMPKRDLFSYCS--MIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHG 227
L+ E+P + CS MI G G E+A+ +F + + ++ + +++ C G
Sbjct: 111 LYREIPAKWREPVCSNAMISGYLKVGRLEEAIKVFEGTVEKDVVSWS---SMVDGYCKKG 167
Query: 228 RLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP--VESHASAW 285
R+ E + F M V + + M+D G + + L SM +E +
Sbjct: 168 RIF-EARELFNMMP-----VRNVVTWTSMIDGYMNVGFFENGFSLFLSMRRVIEVNPLTL 221
Query: 286 GALLGACKFYG 296
+ AC+ +G
Sbjct: 222 TIMFEACRHFG 232
>27985.m000873 pentatricopeptide repeat-containing protein, putative
Length = 762
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 156/311 (50%), Gaps = 54/311 (17%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDG-- 55
+A+++ MPE ++ S NA++ G +L A +F+ M + ++F ++DG
Sbjct: 440 SAQKILKSMPEHSVVSINALIAGYAPV-NLEEAIILFEKMQAEGLNPSEITFASLLDGCG 498
Query: 56 ----------------------------------YAKVGDIASARALFDK-APKRDAFLW 80
Y K AR LF + + + LW
Sbjct: 499 GPEQLILGIQIHCLILKRGLQYDDDFLGVSLLGMYVKSLRKTDARILFSEFSNPKSTILW 558
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ +ISG AQN +EAL+ +Q M N PD+ VS++ AC+ + ++ + + + +
Sbjct: 559 TAMISGLAQNNCSDEALQFYQEMRSCNALPDQATFVSVLRACAVLSSIGDGREIHSLIFR 618
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM-PKRDLFSYCSMIQGLSIHGYAEQAV 199
+ +D+ ++ +ALIDM AKCG++ + ++FE+M K D+ S+ SMI G + +GYAE A+
Sbjct: 619 TGLDLDES-TCSALIDMYAKCGDVRSSMQVFEDMHSKNDVISWNSMIVGFAKNGYAENAL 677
Query: 200 GLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDL 259
+FN+M +IPD+ F +LTACSH V EG+ F+ K S V +P AC+V
Sbjct: 678 RIFNEMKQAHVIPDDVTFLGVLTACSHAGRVSEGRQIFDM---KPSFVTAP---ACLV-- 729
Query: 260 LSRSGQLKEAY 270
R L +AY
Sbjct: 730 --REEVLTKAY 738
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 150/281 (53%), Gaps = 9/281 (3%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDGYA 57
+ +RVF + SW +++ G VK G A +VF+ M E D V+F +I+ Y
Sbjct: 71 DCRRVFDGGVSLDTVSWTSLIAGYVKAGLPEEALEVFEQMKKVGREPDQVAFVTVINAYV 130
Query: 58 KVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVS 117
+G + A LF + P + W+V+ISG+AQ G +++++F M +K + S
Sbjct: 131 ALGRLDDALGLFFQMPNPNVVAWNVMISGHAQRGHETKSIELFCNMRKAGIKSTRSTLGS 190
Query: 118 LMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR 177
++SA + + +LD V + +D +V ++LI+M AKC ++ A K+F+ + +R
Sbjct: 191 VLSAIASLTDLDFGLLVHAEAIKQGLD-SNVYVGSSLINMYAKCKELEAAKKVFDPIDER 249
Query: 178 DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYF 237
++ + +M+ G + +GYA + + L + M + G PD +T IL+AC+ VE G+
Sbjct: 250 NVVLWNAMVGGYAQNGYAHEVIELLSNMKSCGFHPDEFTYTSILSACACLEHVEGGRQ-L 308
Query: 238 ETMKSKYSMVPSPEHYACMVDLLSRSGQLKEA---YELLKS 275
++ K + ++D+ ++SG L++A +EL+KS
Sbjct: 309 HSIIIKNKFASNLFVGNALIDMYAKSGFLEDARKQFELMKS 349
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 168/358 (46%), Gaps = 48/358 (13%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSF----------- 49
D+A +F QMP N+ +WN M+ G + G + ++F +M + + S
Sbjct: 136 DDALGLFFQMPNPNVVAWNVMISGHAQRGHETKSIELFCNMRKAGIKSTRSTLGSVLSAI 195
Query: 50 ----------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ +I+ YAK ++ +A+ +FD +R+ LW+
Sbjct: 196 ASLTDLDFGLLVHAEAIKQGLDSNVYVGSSLINMYAKCKELEAAKKVFDPIDERNVVLWN 255
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
++ GYAQNG +E +++ M+ PDE+ S++SAC+ + +++ + + + ++
Sbjct: 256 AMVGGYAQNGYAHEVIELLSNMKSCGFHPDEFTYTSILSACACLEHVEGGRQLHSIIIKN 315
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
V ALIDM AK G ++ A K FE M RD S+ ++I G +A +
Sbjct: 316 KF-ASNLFVGNALIDMYAKSGFLEDARKQFELMKSRDNVSWNAIIVGYVQEEDEVEAFLM 374
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F KM G++PD + IL+AC++ E+GK + K + S + ++D+ +
Sbjct: 375 FQKMHLVGILPDEVSLASILSACANVEGFEQGKP-IHCLSVKSGLETSLYAGSSLIDMYA 433
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE-LEPENSSP 318
+ G + A ++LKSMP S S + G Y V L E + LFE ++ E +P
Sbjct: 434 KCGDVGSAQKILKSMPEHSVVSINALIAG----YAPVNLEEAII--LFEKMQAEGLNP 485
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 49/265 (18%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGG------DLINARKVFDDMPE------------- 43
AK+VF + ERN+ WNAMVGG + G +L++ K P+
Sbjct: 239 AKKVFDPIDERNVVLWNAMVGGYAQNGYAHEVIELLSNMKSCGFHPDEFTYTSILSACAC 298
Query: 44 -------RDVVSFTV-------------MIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
R + S + +ID YAK G + AR F+ RD W+ +
Sbjct: 299 LEHVEGGRQLHSIIIKNKFASNLFVGNALIDMYAKSGFLEDARKQFELMKSRDNVSWNAI 358
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I GY Q EA +FQ M L+ + PDE + S++SAC+ V + K + C +S +
Sbjct: 359 IVGYVQEEDEVEAFLMFQKMHLVGILPDEVSLASILSACANVEGFEQGKPIHCLSVKSGL 418
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYA----EQAV 199
+ + ++LIDM AKCG++ A K+ + MP+ + S ++I GYA E+A+
Sbjct: 419 ET-SLYAGSSLIDMYAKCGDVGSAQKILKSMPEHSVVSINALIA-----GYAPVNLEEAI 472
Query: 200 GLFNKMLNEGLIPDNAAFTVILTAC 224
LF KM EGL P F +L C
Sbjct: 473 ILFEKMQAEGLNPSEITFASLLDGC 497
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 143/330 (43%), Gaps = 44/330 (13%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP------------------ 42
++A++ F M R+ SWNA++ G V+ D + A +F M
Sbjct: 338 EDARKQFELMKSRDNVSWNAIIVGYVQEEDEVEAFLMFQKMHLVGILPDEVSLASILSAC 397
Query: 43 ---------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
E + + + +ID YAK GD+ SA+ + P+ +
Sbjct: 398 ANVEGFEQGKPIHCLSVKSGLETSLYAGSSLIDMYAKCGDVGSAQKILKSMPEHSVVSIN 457
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
LI+GYA L EA+ +F+ M+ + P E SL+ C L L + C + +
Sbjct: 458 ALIAGYAPVNL-EEAIILFEKMQAEGLNPSEITFASLLDGCGGPEQLILGIQIHCLILKR 516
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM--PKRDLFSYCSMIQGLSIHGYAEQAV 199
+ + +L+ M K A LF E PK + + +MI GL+ + +++A+
Sbjct: 517 GLQYDDDFLGVSLLGMYVKSLRKTDARILFSEFSNPKSTIL-WTAMISGLAQNNCSDEAL 575
Query: 200 GLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDL 259
+ +M + +PD A F +L AC+ + +G+ ++ + + + ++D+
Sbjct: 576 QFYQEMRSCNALPDQATFVSVLRACAVLSSIGDGRE-IHSLIFRTGLDLDESTCSALIDM 634
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALL 289
++ G ++ + ++ + M ++ +W +++
Sbjct: 635 YAKCGDVRSSMQVFEDMHSKNDVISWNSMI 664
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 38/178 (21%)
Query: 48 SFTV--MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMEL 105
SF V +ID YAK ++ R +FD D W+ LI+GY + GLP EAL++F+ M+
Sbjct: 53 SFCVGALIDMYAKNNRMSDCRRVFDGGVSLDTVSWTSLIAGYVKAGLPEEALEVFEQMKK 112
Query: 106 MNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMD 165
+ +PD+ V++++A +G L D
Sbjct: 113 VGREPDQVAFVTVINAYVALGRL------------------------------------D 136
Query: 166 RANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
A LF +MP ++ ++ MI G + G+ +++ LF M G+ + +L+A
Sbjct: 137 DALGLFFQMPNPNVVAWNVMISGHAQRGHETKSIELFCNMRKAGIKSTRSTLGSVLSA 194
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 15/201 (7%)
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
P+E+ ++S C+++ +++ + V C + + + + V ALIDM AK M +
Sbjct: 16 PNEFTFAIVLSGCARLDSVEFGRLVHCNVVKLGFEF-SSFCVGALIDMYAKNNRMSDCRR 74
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHGR 228
+F+ D S+ S+I G G E+A+ +F +M G PD AF ++ A + GR
Sbjct: 75 VFDGGVSLDTVSWTSLIAGYVKAGLPEEALEVFEQMKKVGREPDQVAFVTVINAYVALGR 134
Query: 229 LVEEGKHYFETMKSKYSMVPSPEHYA--CMVDLLSRSGQLKEAYELLKSMP---VESHAS 283
L + +F+ +P+P A M+ ++ G ++ EL +M ++S S
Sbjct: 135 LDDALGLFFQ--------MPNPNVVAWNVMISGHAQRGHETKSIELFCNMRKAGIKSTRS 186
Query: 284 AWGALLGACKFYGEVELGEIV 304
G++L A +++ G +V
Sbjct: 187 TLGSVLSAIASLTDLDFGLLV 207
>29757.m000711 pentatricopeptide repeat-containing protein, putative
Length = 542
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 161/330 (48%), Gaps = 60/330 (18%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSF---------TV 51
D A VF + RNL SWN+M+ G A +F M RD + F +
Sbjct: 215 DEAWSVFANLEYRNLVSWNSMIAGFQVRKLGAKAISLFSQM-HRDGIGFDRATLLSVLSS 273
Query: 52 MIDGYAKVGDIA----------SARALF-----------------------------DKA 72
+ +GY+ V D+ S R+ F +
Sbjct: 274 LSEGYSAVSDVGLNYCFQLHCLSIRSAFVLQVEVATALVKAYSDLGGEVTDCYKLFLETG 333
Query: 73 PKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAK 132
+D W+ +I+ A+ P EAL +F+ + ++ PD Y ++ AC+ +G A
Sbjct: 334 CYKDIVSWTGIITALAERQ-PEEALFLFRQLHREDLAPDWYTFSIVLKACAGLGTERQAL 392
Query: 133 WVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIH 192
V + ++ + G + ALI A+CG++ + ++F+EM R+L S+ SM++ ++H
Sbjct: 393 TVHSRVIKAGFE-GDVVLENALIHAYARCGSIFLSKQVFDEMRMRNLVSWNSMLKAYALH 451
Query: 193 GYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEH 252
G A++A+ LF++M + PD+A +L+ACSH +VEEG FE+M ++ +H
Sbjct: 452 GQAKEALHLFSEM---NVRPDSATMVALLSACSHAGMVEEGIKIFESMSDRH------DH 502
Query: 253 YACMVDLLSRSGQLKEAYELLKSMPVESHA 282
YACMVD+L ++G++ EA EL+ MP+E A
Sbjct: 503 YACMVDILGQAGRVFEAKELINIMPMEPDA 532
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I+ YAK GD+ AR LF + P+R+ W+ LISGYAQ+G E ++F M LM+ +P+
Sbjct: 107 LINMYAKCGDLEYARQLFAEMPERNVVSWTALISGYAQHGQAYECSRLFSSM-LMHCRPN 165
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM-DRANKL 170
E+ + S +S+C + D K V + +D ++ LI M + G+ D A +
Sbjct: 166 EFALTSNLSSC----DYDHGKQVHALAFKMGLD-ATVYIGNTLISMYSNNGDSDDEAWSV 220
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAA 216
F + R+L S+ SMI G + +A+ LF++M +G+ D A
Sbjct: 221 FANLEYRNLVSWNSMIAGFQVRKLGAKAISLFSQMHRDGIGFDRAT 266
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 167/419 (39%), Gaps = 91/419 (21%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM--------------------- 41
A+++F +MPERN+ SW A++ G + G ++F M
Sbjct: 120 ARQLFAEMPERNVVSWTALISGYAQHGQAYECSRLFSSMLMHCRPNEFALTSNLSSCDYD 179
Query: 42 --PERDVVSFTVMIDGYAKVGDIA------------SARALFDKAPKRDAFLWSVLISGY 87
+ ++F + +D +G+ A ++F R+ W+ +I+G+
Sbjct: 180 HGKQVHALAFKMGLDATVYIGNTLISMYSNNGDSDDEAWSVFANLEYRNLVSWNSMIAGF 239
Query: 88 AQNGLPNEALKIFQGMELMNVKPDEYIMVSLM-------SACSQVGNLDLAKWVDCYLSQ 140
L +A+ +F M + D ++S++ SA S VG L+ + C LS
Sbjct: 240 QVRKLGAKAISLFSQMHRDGIGFDRATLLSVLSSLSEGYSAVSDVG-LNYCFQLHC-LSI 297
Query: 141 SSIDIGQTHVVAALIDMNAKCG-NMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQA 198
S + Q V AL+ + G + KLF E +D+ S+ +I L+ E+A
Sbjct: 298 RSAFVLQVEVATALVKAYSDLGGEVTDCYKLFLETGCYKDIVSWTGIITALA-ERQPEEA 356
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACS-----------HGRLVEEG-------------- 233
+ LF ++ E L PD F+++L AC+ H R+++ G
Sbjct: 357 LFLFRQLHREDLAPDWYTFSIVLKACAGLGTERQALTVHSRVIKAGFEGDVVLENALIHA 416
Query: 234 ----------KHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHAS 283
K F+ M+ + ++V + M+ + GQ KEA L M V ++
Sbjct: 417 YARCGSIFLSKQVFDEMRMR-NLVS----WNSMLKAYALHGQAKEALHLFSEMNVRPDSA 471
Query: 284 AWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKM 342
ALL AC G VE G ++FE + Y + I A + + + N M
Sbjct: 472 TMVALLSACSHAGMVEEGI----KIFESMSDRHDHYACMVDILGQAGRVFEAKELINIM 526
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 8/150 (5%)
Query: 88 AQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQ 147
+ G +EAL +F L + + +L AC++ G L ++ +L ++ + G
Sbjct: 38 STRGQIDEALSLFYNAPL-PLPHSQQTYATLFHACARHGYLQQGIYLHQHLLLNNKNQGN 96
Query: 148 ----THVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
V LI+M AKCG+++ A +LF EMP+R++ S+ ++I G + HG A + LF+
Sbjct: 97 RPLGVFVTNHLINMYAKCGDLEYARQLFAEMPERNVVSWTALISGYAQHGQAYECSRLFS 156
Query: 204 KMLNEGLIPDNAAFTVILTAC--SHGRLVE 231
ML P+ A T L++C HG+ V
Sbjct: 157 SMLMH-CRPNEFALTSNLSSCDYDHGKQVH 185
>29693.m002080 pentatricopeptide repeat-containing protein, putative
Length = 562
Score = 134 bits (336), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 157/324 (48%), Gaps = 5/324 (1%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A+R+F +MPERN+ SW MV G +K G + A + F DMP RDV ++ MI GY I
Sbjct: 189 ARRLFDEMPERNVVSWTTMVNGYLKFGRVEIAERFFWDMPVRDVAAWNAMIFGYCGNRRI 248
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
A LF+K P R+ W+ +I G QNG EAL +F M VKP +++AC
Sbjct: 249 ADGLNLFEKMPCRNVISWTSMIGGLDQNGKSEEALILFGKMMDSGVKPTSTTYACVLTAC 308
Query: 123 SQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSY 182
+ + ++ V +S+ + A+LI + C + A+++F E +++ +
Sbjct: 309 ANAMDFNMGVQVHGRVSKLGYK-SDEFISASLITFYSNCKQVKNAHQVFNETLSKNVVIW 367
Query: 183 CSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKS 242
+++ G ++ E A+ +F+ M+ G+ P+ + F +C ++ GK T+ +
Sbjct: 368 TALLTGCELNSKHEDALRVFSDMIKMGVFPNQSTFISAFNSCRGLEALDRGKE-IHTVTA 426
Query: 243 KYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGE 302
K + +V + + G + +A + K + E + +W +++ +G
Sbjct: 427 KLGLETDVFVGNSLVVMYNECGNVNDAVAVFKKIK-EKNDVSWNSIIVGSSQHGHGIWAL 485
Query: 303 IVANRLFE--LEPENSSPYVLLSS 324
I N++ ++P+ + LLS+
Sbjct: 486 IFFNQMIRTCVDPDEITLTGLLSA 509
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 138/312 (44%), Gaps = 68/312 (21%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
D A+ +F ++P M+ G + G L +A +FD M RD++S+ MI G G
Sbjct: 125 DQARFLFAKIPSPEAYLCTLMINGYARSGRLNDALMLFDRMTVRDIISWNSMIKGCLDCG 184
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
D+ AR LFD+ P+R+ W+ +++GY + G A + F M +
Sbjct: 185 DLGMARRLFDEMPERNVVSWTTMVNGYLKFGRVEIAERFFWDMPVR-------------- 230
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN--KLFEEMPKRD 178
D+A W +++ G CGN A+ LFE+MP R+
Sbjct: 231 --------DVAAW-------NAMIFGY-------------CGNRRIADGLNLFEKMPCRN 262
Query: 179 LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS-----------HG 227
+ S+ SMI GL +G +E+A+ LF KM++ G+ P + + +LTAC+ HG
Sbjct: 263 VISWTSMIGGLDQNGKSEEALILFGKMMDSGVKPTSTTYACVLTACANAMDFNMGVQVHG 322
Query: 228 RLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGA 287
R+ + G E + A ++ S Q+K A+++ + + W A
Sbjct: 323 RVSKLGYKSDEFIS------------ASLITFYSNCKQVKNAHQVFNE-TLSKNVVIWTA 369
Query: 288 LLGACKFYGEVE 299
LL C+ + E
Sbjct: 370 LLTGCELNSKHE 381
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 129/272 (47%), Gaps = 40/272 (14%)
Query: 6 VFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTV-------------- 51
+F +MP RN+ SW +M+GGL + G A +F M + V +
Sbjct: 254 LFEKMPCRNVISWTSMIGGLDQNGKSEEALILFGKMMDSGVKPTSTTYACVLTACANAMD 313
Query: 52 -------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
+I Y+ + +A +F++ ++ +W+ L++G
Sbjct: 314 FNMGVQVHGRVSKLGYKSDEFISASLITFYSNCKQVKNAHQVFNETLSKNVVIWTALLTG 373
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG 146
N +AL++F M M V P++ +S ++C + LD K + ++ ++
Sbjct: 374 CELNSKHEDALRVFSDMIKMGVFPNQSTFISAFNSCRGLEALDRGKEIHTVTAKLGLET- 432
Query: 147 QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
V +L+ M +CGN++ A +F+++ +++ S+ S+I G S HG+ A+ FN+M+
Sbjct: 433 DVFVGNSLVVMYNECGNVNDAVAVFKKIKEKNDVSWNSIIVGSSQHGHGIWALIFFNQMI 492
Query: 207 NEGLIPDNAAFTVILTACSHGRLVEEGKHYFE 238
+ PD T +L+ACSH ++++G+ +F+
Sbjct: 493 RTCVDPDEITLTGLLSACSHSGMLQKGRRFFQ 524
>27996.m000150 pentatricopeptide repeat-containing protein, putative
Length = 617
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 148/293 (50%), Gaps = 7/293 (2%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGL---VKGGDLINARKVFDDMP-ERDVVSFTVMIDGY 56
D+A+ VF +PE ++ SWN M+ G K G I + E D V++ M+
Sbjct: 302 DSAEEVFANLPEMSVVSWNVMIAGYGQKCKSGKAIEYLQRMQSCGFEPDEVTYINMLTAC 361
Query: 57 AKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMV 116
+ GDI R +FD W+ ++SGY Q NEA+K+F+ M+ NVKPD +
Sbjct: 362 VRSGDIEIGRQIFDCMACPGVSSWNGMLSGYFQIENHNEAIKLFREMQFQNVKPDRTTLA 421
Query: 117 SLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK 176
++S+C+ + L+ K V +SQ + +V + LI M +KCG MD A+ +F+++ K
Sbjct: 422 IILSSCAGMELLEAGKQVHA-ISQKAAFHEDIYVASGLIGMYSKCGKMDIADCIFKKISK 480
Query: 177 RDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHY 236
+D + SMI GLS++ +A+ F +M G+ P ++ IL+ C+ + GK
Sbjct: 481 QDTVCWNSMIAGLSLNSLDNEALAFFQQMRQSGMSPTQFSYATILSCCAKLSSLIHGKQI 540
Query: 237 FETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
+ +K V + +VD+ + G++ EA + M ++ + W ++
Sbjct: 541 HAQI-AKEGFVNDVYVGSALVDMYCKCGEVGEARQFFDIMSSKNTVT-WNEMI 591
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 141/305 (46%), Gaps = 46/305 (15%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A +F QMP +N+ SWNA++ K G+L NA ++F +MPER++VS
Sbjct: 60 AHNLFHQMPHKNIYSWNAILTEYCKAGNLQNAHRLFSEMPERNIVS-------------- 105
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
W+ LIS + L +AL ++ M + P + + S++SAC
Sbjct: 106 -----------------WNNLISALVRGRLEQQALDVYNEMIWEGLMPTHFTLASILSAC 148
Query: 123 SQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSY 182
+ N++ + + + +D +V AL+ + +KCG + A +LFEEM + + +Y
Sbjct: 149 GTLLNMESGRKCHTLIVKIGLD-NNVYVSNALLSVYSKCGLVRDAVRLFEEMQEPNEVTY 207
Query: 183 CSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE----EGKHYFE 238
+M+ G + +A+ +F M +G+ D+ + + +L C+ G E +G
Sbjct: 208 TAMMSGFTQTDRVVEALEMFRLMCRQGICIDSVSLSSVLGVCTKGGCGESDQSDGSLRNA 267
Query: 239 TMKSKYSMVPS----PEHYAC--MVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGAC 292
K + + + + C ++D+ ++ G + A E+ ++P E +W ++
Sbjct: 268 LGKLAHGLAIKLGFESDLHLCNSLLDMYAKDGDMDSAEEVFANLP-EMSVVSWNVMIAG- 325
Query: 293 KFYGE 297
YG+
Sbjct: 326 --YGQ 328
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 115/250 (46%), Gaps = 41/250 (16%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PERDVVSFTV----- 51
+++F M ++SWN M+ G + + A K+F +M P+R ++ +
Sbjct: 370 GRQIFDCMACPGVSSWNGMLSGYFQIENHNEAIKLFREMQFQNVKPDRTTLAIILSSCAG 429
Query: 52 ----------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
+I Y+K G + A +F K K+D W+ +
Sbjct: 430 MELLEAGKQVHAISQKAAFHEDIYVASGLIGMYSKCGKMDIADCIFKKISKQDTVCWNSM 489
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I+G + N L NEAL FQ M + P ++ +++S C+++ +L K + +++
Sbjct: 490 IAGLSLNSLDNEALAFFQQMRQSGMSPTQFSYATILSCCAKLSSLIHGKQIHAQIAKEGF 549
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+ +V +AL+DM KCG + A + F+ M ++ ++ MI G + +G+ +AV L+
Sbjct: 550 -VNDVYVGSALVDMYCKCGEVGEARQFFDIMSSKNTVTWNEMIHGYAQNGHGHEAVCLYR 608
Query: 204 KMLNEGLIPD 213
M+ E I D
Sbjct: 609 DMI-ESAIQD 617
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 127/289 (43%), Gaps = 51/289 (17%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP------------------- 42
NA R+F +MPERN+ SWN ++ LV+G A V+++M
Sbjct: 90 NAHRLFSEMPERNIVSWNNLISALVRGRLEQQALDVYNEMIWEGLMPTHFTLASILSACG 149
Query: 43 --------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+ +V ++ Y+K G + A LF++ + + ++
Sbjct: 150 TLLNMESGRKCHTLIVKIGLDNNVYVSNALLSVYSKCGLVRDAVRLFEEMQEPNEVTYTA 209
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS- 141
++SG+ Q EAL++F+ M + D + S++ C++ G + D L +
Sbjct: 210 MMSGFTQTDRVVEALEMFRLMCRQGICIDSVSLSSVLGVCTK-GGCGESDQSDGSLRNAL 268
Query: 142 -------SIDIG---QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSI 191
+I +G H+ +L+DM AK G+MD A ++F +P+ + S+ MI G
Sbjct: 269 GKLAHGLAIKLGFESDLHLCNSLLDMYAKDGDMDSAEEVFANLPEMSVVSWNVMIAGYGQ 328
Query: 192 HGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
+ +A+ +M + G PD + +LTAC +E G+ F+ M
Sbjct: 329 KCKSGKAIEYLQRMQSCGFEPDEVTYINMLTACVRSGDIEIGRQIFDCM 377
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 38/194 (19%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
E D+ ++D YAK GD+ SA +F P+ W+V+I+GY Q +A++ Q
Sbjct: 282 ESDLHLCNSLLDMYAKDGDMDSAEEVFANLPEMSVVSWNVMIAGYGQKCKSGKAIEYLQR 341
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
M+ +PDE +++++AC + G++++ +
Sbjct: 342 MQSCGFEPDEVTYINMLTACVRSGDIEIGR------------------------------ 371
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQG-LSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVIL 221
++F+ M + S+ M+ G I + E A+ LF +M + + PD +IL
Sbjct: 372 ------QIFDCMACPGVSSWNGMLSGYFQIENHNE-AIKLFREMQFQNVKPDRTTLAIIL 424
Query: 222 TACSHGRLVEEGKH 235
++C+ L+E GK
Sbjct: 425 SSCAGMELLEAGKQ 438
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 1 DNAKRVFVQMPERNLT----SWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVM 52
+ A F QM + ++ S+ ++ K LI+ +++ + + DV + +
Sbjct: 500 NEALAFFQQMRQSGMSPTQFSYATILSCCAKLSSLIHGKQIHAQIAKEGFVNDVYVGSAL 559
Query: 53 IDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM 103
+D Y K G++ AR FD ++ W+ +I GYAQNG +EA+ +++ M
Sbjct: 560 VDMYCKCGEVGEARQFFDIMSSKNTVTWNEMIHGYAQNGHGHEAVCLYRDM 610
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 148 THVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLN 207
T ++ LI+ KC NM A+ LF +MP ++++S+ +++ G + A LF++M
Sbjct: 41 TFLLNRLIEFYFKCKNMGYAHNLFHQMPHKNIYSWNAILTEYCKAGNLQNAHRLFSEMPE 100
Query: 208 EGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQL- 266
++ N +++A GRL ++ + M + M P H+ + +LS G L
Sbjct: 101 RNIVSWNN----LISALVRGRLEQQALDVYNEMIWEGLM---PTHFT-LASILSACGTLL 152
Query: 267 -----KEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLF-ELEPENSSPYV 320
++ + L+ + ++++ ALL G V A RLF E++ N Y
Sbjct: 153 NMESGRKCHTLIVKIGLDNNVYVSNALLSVYSKCGLVR----DAVRLFEEMQEPNEVTYT 208
Query: 321 LLSSIYAAADQWLDVSHVKNKMKERGL 347
+ S + D+ ++ + M +G+
Sbjct: 209 AMMSGFTQTDRVVEALEMFRLMCRQGI 235
>29630.m000788 pentatricopeptide repeat-containing protein, putative
Length = 502
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 137/290 (47%), Gaps = 45/290 (15%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP-------------------- 42
A+ VF M ER++ SW +M+ G + GD +A +F M
Sbjct: 212 ARLVFDGMDERDVISWTSMINGYILNGDEKSALTLFRTMQMERIIPSSVTIASVLSACIN 271
Query: 43 ----------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
+ +++ T +ID YAK + + + + W+ ++SG
Sbjct: 272 LKDGRCFHGWTMRQNLDSEIIVETSLIDMYAKCNRVDLSYGVLRRTSGERTAPWNAMLSG 331
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG 146
N L EA+ +F+ M L V+PD SL+ A + + +L AK + CYL ++ G
Sbjct: 332 CIHNDLATEAITLFKQMLLKKVEPDGATFNSLLPAYAILADLLPAKNIHCYLKKTGFLSG 391
Query: 147 QTHVVAALIDMNAKCGNMDRANKLFEEMP--KRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
V LID+ +KCG+++ A+++F +P RD+F++ +I G +HG+ E AV LF +
Sbjct: 392 -LEVATCLIDIYSKCGSLESAHRIFNAIPIGVRDIFAWSVIISGYGMHGHGETAVSLFRQ 450
Query: 205 MLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYA 254
M+ G+ P+ FT IL ACSH LV+E S Y V H+A
Sbjct: 451 MVQSGVRPNEVTFTSILHACSHAGLVDED------CASPYERVDVKHHHA 494
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 151/339 (44%), Gaps = 45/339 (13%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV-------------- 46
+ A+R+F M ER++ SWN M+ G K G A VF+ M + V
Sbjct: 109 EAAERIFDVMKERSVISWNIMINGYFKNGCAEKALMVFNQMVDLGVEIDCASVVSVLPAC 168
Query: 47 -----------VSFTV--------------MIDGYAKVGDIASARALFDKAPKRDAFLWS 81
V TV +ID YAK G +A AR +FD +RD W+
Sbjct: 169 GHLKELEMGRRVHATVEDKDLGNKIAARNALIDMYAKCGSMAEARLVFDGMDERDVISWT 228
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I+GY NG AL +F+ M++ + P + S++SAC NL + + +
Sbjct: 229 SMINGYILNGDEKSALTLFRTMQMERIIPSSVTIASVLSACI---NLKDGRCFHGWTMRQ 285
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
++D + V +LIDM AKC +D + + + +M+ G + A +A+ L
Sbjct: 286 NLD-SEIIVETSLIDMYAKCNRVDLSYGVLRRTSGERTAPWNAMLSGCIHNDLATEAITL 344
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F +ML + + PD A F +L A + + K+ +K K + E C++D+ S
Sbjct: 345 FKQMLLKKVEPDGATFNSLLPAYAILADLLPAKNIHCYLK-KTGFLSGLEVATCLIDIYS 403
Query: 262 RSGQLKEAYELLKSMPVESH-ASAWGALLGACKFYGEVE 299
+ G L+ A+ + ++P+ AW ++ +G E
Sbjct: 404 KCGSLESAHRIFNAIPIGVRDIFAWSVIISGYGMHGHGE 442
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 147/289 (50%), Gaps = 15/289 (5%)
Query: 64 SARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACS 123
+A +FD +R W+++I+GY +NG +AL +F M + V+ D +VS++ AC
Sbjct: 110 AAERIFDVMKERSVISWNIMINGYFKNGCAEKALMVFNQMVDLGVEIDCASVVSVLPACG 169
Query: 124 QVGNLDLAKWVDCYLSQSSIDIG-QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSY 182
+ L++ + V + D+G + ALIDM AKCG+M A +F+ M +RD+ S+
Sbjct: 170 HLKELEMGRRVHATVEDK--DLGNKIAARNALIDMYAKCGSMAEARLVFDGMDERDVISW 227
Query: 183 CSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE-TMK 241
SMI G ++G + A+ LF M E +IP + +L+AC + +++G+ + TM+
Sbjct: 228 TSMINGYILNGDEKSALTLFRTMQMERIIPSSVTIASVLSACIN---LKDGRCFHGWTMR 284
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELG 301
E ++D+ ++ ++ +Y +L+ E A W A+L C + ++
Sbjct: 285 QNLDSEIIVE--TSLIDMYAKCNRVDLSYGVLRRTSGERTA-PWNAMLSGC-IHNDLATE 340
Query: 302 EIVANR---LFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGL 347
I + L ++EP+ ++ LL + YA L ++ +K+ G
Sbjct: 341 AITLFKQMLLKKVEPDGATFNSLLPA-YAILADLLPAKNIHCYLKKTGF 388
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 108/238 (45%), Gaps = 29/238 (12%)
Query: 77 AFLWSVLISGYAQNG-LPNEALKIFQGMELMN-VKPDEYIMVSLMSACSQVGNLDLAKWV 134
A L S L Y G L +ALK++ M PD Y ++ ACS++G ++L K +
Sbjct: 43 AHLQSGLARSYMHCGKLYFDALKVYSEMLRSGYCFPDNYTYPVVIKACSELGLIELGKMI 102
Query: 135 DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGY 194
GQT + A ++F+ M +R + S+ MI G +G
Sbjct: 103 H----------GQT--------------VKEAAERIFDVMKERSVISWNIMINGYFKNGC 138
Query: 195 AEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYA 254
AE+A+ +FN+M++ G+ D A+ +L AC H + +E G+ T++ K +
Sbjct: 139 AEKALMVFNQMVDLGVEIDCASVVSVLPACGHLKELEMGRRVHATVEDK-DLGNKIAARN 197
Query: 255 CMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELE 312
++D+ ++ G + EA + M E +W +++ G+ E + R ++E
Sbjct: 198 ALIDMYAKCGSMAEARLVFDGMD-ERDVISWTSMINGYILNGD-EKSALTLFRTMQME 253
>29769.m000453 pentatricopeptide repeat-containing protein, putative
Length = 446
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 127/236 (53%), Gaps = 6/236 (2%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDGY 56
D A+ +F ++ +N+ SWN+M+ G +K G +F +M + D V+ + ++ Y
Sbjct: 209 DQARWLFDRLANKNMVSWNSMISGYLKNGQFEIGINLFHEMQGLGLKPDQVTVSNVLCAY 268
Query: 57 AKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMV 116
+ G I A LF + ++D W+ +I GY QNG AL +F M L NV+PD Y +
Sbjct: 269 FQSGYIDGATKLFSETREKDKVCWTTMIVGYTQNGKEENALMLFNEM-LENVRPDSYTIS 327
Query: 117 SLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK 176
S++S+C+++ +L + + ID V +L+DM KCG A +F MP
Sbjct: 328 SVVSSCAKLASLIHGQVIHGIALLMGID-DDLLVSTSLVDMYCKCGVTSDAWVVFSMMPA 386
Query: 177 RDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEE 232
R + S+ +M+ G + +G +A+ L+ KM E + PDN F +L+AC+H L +E
Sbjct: 387 RSVVSWNAMLGGYARNGQDLEALALYEKMFQENIRPDNITFVGVLSACNHAGLFDE 442
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 127/249 (51%), Gaps = 7/249 (2%)
Query: 1 DNAKRVFVQM------PERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMID 54
D AKR+ M P + N ++ K G + +AR +FD M RD+ S+ M+
Sbjct: 40 DQAKRLETHMDFHLYQPSDSFLQ-NRLLHLYAKLGKISHARYLFDKMSYRDIFSWNAMLS 98
Query: 55 GYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYI 114
YAK G + R +FD P RD+ ++ +I+G+A+NG +A++ F M+ KP EY
Sbjct: 99 LYAKAGLVEDLRVVFDDMPSRDSVSYNTVITGFAKNGRAGKAVEAFVRMQTEGFKPTEYT 158
Query: 115 MVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM 174
VS+++AC+Q+ +L K + + + G + AL DM AKC +D+A LF+ +
Sbjct: 159 HVSVLNACTQLLDLRKGKQIHGRILTGNYLGGNVFIWNALTDMYAKCKEIDQARWLFDRL 218
Query: 175 PKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK 234
+++ S+ SMI G +G E + LF++M GL PD + +L A ++
Sbjct: 219 ANKNMVSWNSMISGYLKNGQFEIGINLFHEMQGLGLKPDQVTVSNVLCAYFQSGYIDGAT 278
Query: 235 HYFETMKSK 243
F + K
Sbjct: 279 KLFSETREK 287
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 150/372 (40%), Gaps = 93/372 (25%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER---------------- 44
++ + VF MP R+ S+N ++ G K G A + F M
Sbjct: 107 EDLRVVFDDMPSRDSVSYNTVITGFAKNGRAGKAVEAFVRMQTEGFKPTEYTHVSVLNAC 166
Query: 45 ------------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLW 80
+V + + D YAK +I AR LFD+ ++ W
Sbjct: 167 TQLLDLRKGKQIHGRILTGNYLGGNVFIWNALTDMYAKCKEIDQARWLFDRLANKNMVSW 226
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ +ISGY +NG + +F M+ + +KPD+ + +++ A Q
Sbjct: 227 NSMISGYLKNGQFEIGINLFHEMQGLGLKPDQVTVSNVLCAYFQ---------------- 270
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
G +D A KLF E ++D + +MI G + +G E A+
Sbjct: 271 --------------------SGYIDGATKLFSETREKDKVCWTTMIVGYTQNGKEENALM 310
Query: 201 LFNKMLNEGLIPDNAAFTVILTACS------HGRLVEEGKHYFETMKSKYSMVPSPEHYA 254
LFN+ML E + PD+ + ++++C+ HG+++ G + + S
Sbjct: 311 LFNEML-ENVRPDSYTISSVVSSCAKLASLIHGQVI-HGIALLMGIDDDLLVSTS----- 363
Query: 255 CMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE--LE 312
+VD+ + G +A+ + MP S S W A+LG G+ + ++F+ +
Sbjct: 364 -LVDMYCKCGVTSDAWVVFSMMPARSVVS-WNAMLGGYARNGQDLEALALYEKMFQENIR 421
Query: 313 PENSSPYVLLSS 324
P+N + +LS+
Sbjct: 422 PDNITFVGVLSA 433
>29825.m000324 pentatricopeptide repeat-containing protein, putative
Length = 567
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 43/287 (14%)
Query: 1 DNAKRVF--VQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV-----------V 47
+ A+RVF +++ R+ SWN M+ + + A K+F +M R +
Sbjct: 190 EEAERVFYGIEIENRDQVSWNTMIVAYGRQREGFKALKLFQEMTHRGIDVDMYTLASVLT 249
Query: 48 SFTVM----------------------------IDGYAKVGD-IASARALFDKAPKRDAF 78
+FT + +D YAK G + R +F + + D
Sbjct: 250 AFTCLEDLFGGFQFHANLIKTGFYRNCHVGSGLVDLYAKCGGGMLDCRKIFVEIREPDLV 309
Query: 79 LWSVLISGYA-QNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY 137
LW+ +IS Y+ L E L F+ M+ +PD+ V ++ ACS + + K +
Sbjct: 310 LWNTMISAYSLDEELSEETLDCFRRMQRAGFRPDDCSFVCVIRACSNLSSPSQGKQIHAM 369
Query: 138 LSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQ 197
+S I Q V AL+ M +KCGN+ A +LF+ MP+ + S+ S+I G + HG +
Sbjct: 370 TVKSEIPSNQISVNNALVAMYSKCGNLQDARRLFDRMPEHNTVSFNSIIAGYAQHGIKTE 429
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKY 244
++ LF +ML G+ P F +L+AC+H VEEG+ YF+ MK K+
Sbjct: 430 SLCLFEQMLEIGIAPTRITFISVLSACAHTGKVEEGRRYFDMMKEKF 476
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 150/338 (44%), Gaps = 49/338 (14%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER--DVVSFTV--------- 51
A+ +F Q+P+ + S+N ++ GD +NA +F +M E D+ +T+
Sbjct: 93 ARGLFDQIPQPDAISYNTLITAYADCGDSLNALYLFREMRETGIDMDGYTLSGVITACCN 152
Query: 52 --------------------------MIDGYAKVGDIASARALF--DKAPKRDAFLWSVL 83
+ Y K G + A +F + RD W+ +
Sbjct: 153 DVNLIRQLHCLAGNYGLDSYVSVKNSFVTYYGKNGFLEEAERVFYGIEIENRDQVSWNTM 212
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I Y + +ALK+FQ M + D Y + S+++A + + +L L ++
Sbjct: 213 IVAYGRQREGFKALKLFQEMTHRGIDVDMYTLASVLTAFTCLEDLFGGFQFHANLIKTGF 272
Query: 144 DIGQTHVVAALIDMNAKC-GNMDRANKLFEEMPKRDLFSYCSMIQGLSI-HGYAEQAVGL 201
HV + L+D+ AKC G M K+F E+ + DL + +MI S+ +E+ +
Sbjct: 273 -YRNCHVGSGLVDLYAKCGGGMLDCRKIFVEIREPDLVLWNTMISAYSLDEELSEETLDC 331
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH-YFETMKSKYSMVPSPEHYA--CMVD 258
F +M G PD+ +F ++ ACS+ +GK + T+KS+ +PS + +V
Sbjct: 332 FRRMQRAGFRPDDCSFVCVIRACSNLSSPSQGKQIHAMTVKSE---IPSNQISVNNALVA 388
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYG 296
+ S+ G L++A L MP E + ++ +++ +G
Sbjct: 389 MYSKCGNLQDARRLFDRMP-EHNTVSFNSIIAGYAQHG 425
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 5/199 (2%)
Query: 27 KGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
K L A F+ E +V SF V++D YAK AR LFD+ P+ DA ++ LI+
Sbjct: 55 KCNRLTLAHHAFNQNHEPNVFSFNVLLDAYAKKSLTHIARGLFDQIPQPDAISYNTLITA 114
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG 146
YA G AL +F+ M + D Y + +++AC +++L + + C +D
Sbjct: 115 YADCGDSLNALYLFREMRETGIDMDGYTLSGVITAC--CNDVNLIRQLHCLAGNYGLD-S 171
Query: 147 QTHVVAALIDMNAKCGNMDRANKLFE--EMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
V + + K G ++ A ++F E+ RD S+ +MI +A+ LF +
Sbjct: 172 YVSVKNSFVTYYGKNGFLEEAERVFYGIEIENRDQVSWNTMIVAYGRQREGFKALKLFQE 231
Query: 205 MLNEGLIPDNAAFTVILTA 223
M + G+ D +LTA
Sbjct: 232 MTHRGIDVDMYTLASVLTA 250
>30131.m006999 pentatricopeptide repeat-containing protein, putative
Length = 454
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 128/232 (55%), Gaps = 8/232 (3%)
Query: 24 GLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
G+ KG +K D+ DV ++D YAK G++ +R +FD+ ++DA W+ +
Sbjct: 209 GMTKGVHGFVVKKGLDE----DVGIENTLLDAYAKCGEVGVSRQVFDEIVEKDAISWNSM 264
Query: 84 ISGYAQNGLPNEALKIFQGM-ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
I+ YAQNGL +EA ++F GM + VK + + +L+ AC+ G L K + + +
Sbjct: 265 IAVYAQNGLSSEAFEVFHGMIKYGYVKYNAVTLSTLLLACAHSGALQTGKCIHDQVIRMG 324
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+D V +LIDM KCG + A K F+ M ++++ S+ +M+ G +HG A +A+ +F
Sbjct: 325 LD-DNVIVGTSLIDMYCKCGRVQMARKTFDGMKEKNVKSWTAMVAGYGMHGCAREALNIF 383
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYA 254
KM+ G+ P+ F +L ACSH L++EG YF+ + + + H A
Sbjct: 384 YKMIRSGVKPNYITFVSVLAACSHAGLLDEG--YFQLDQQAFLAAITERHGA 433
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 168/372 (45%), Gaps = 56/372 (15%)
Query: 10 MPERNLTSWNAMVGGLVKGGDLINARKVFDDMP--------------------------- 42
+ N+ SWN+++ L + GD I + + F M
Sbjct: 42 FEKTNVFSWNSLIADLARSGDSIESLRAFYSMRKLNLKPNRSTFPCAIKACSSLLDLHWG 101
Query: 43 ------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQN 90
E D+ + ++D Y+K G ++ AR LFD+ R+ +W+ +I+GY QN
Sbjct: 102 KQTHQQALVFGFESDLFVSSALVDMYSKCGRLSDARILFDEITHRNIVIWTSMITGYIQN 161
Query: 91 GLPNEALKIFQGMEL----MNVKPDEYI-----MVSLMSACSQVGNLDLAKWVDCYLSQS 141
+EAL +F+ + N + DE + MVS++SACS++ + K V ++ +
Sbjct: 162 DHAHEALLLFKQFLIEESERNEEKDEVLMDSVAMVSVLSACSRISGKGMTKGVHGFVVKK 221
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+D + L+D AKCG + + ++F+E+ ++D S+ SMI + +G + +A +
Sbjct: 222 GLD-EDVGIENTLLDAYAKCGEVGVSRQVFDEIVEKDAISWNSMIAVYAQNGLSSEAFEV 280
Query: 202 FNKMLNEGLIPDNA-AFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
F+ M+ G + NA + +L AC+H ++ GK + + + + + ++D+
Sbjct: 281 FHGMIKYGYVKYNAVTLSTLLLACAHSGALQTGKCIHDQV-IRMGLDDNVIVGTSLIDMY 339
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP-Y 319
+ G+++ A + M E + +W A++ YG N +++ P Y
Sbjct: 340 CKCGRVQMARKTFDGMK-EKNVKSWTAMVAG---YGMHGCAREALNIFYKMIRSGVKPNY 395
Query: 320 VLLSSIYAAADQ 331
+ S+ AA
Sbjct: 396 ITFVSVLAACSH 407
>30147.m014375 pentatricopeptide repeat-containing protein, putative
Length = 543
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 164/308 (53%), Gaps = 13/308 (4%)
Query: 21 MVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLW 80
++ G V GD + A FD DV ++D YAK G R +FD+ P +D W
Sbjct: 156 LLQGKVAHGDAVKAD--FDS----DVYVKAALVDMYAKCGQFCDGRKIFDEMPVKDLVCW 209
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ +I+ Y Q P+EAL + + M+ + PDE MVS+ SA Q+ + A+ V Y +
Sbjct: 210 TAMITAYEQGEKPDEALILLRKMQQHGLFPDEVTMVSVASAIGQLWDAKWAQSVHAYAIR 269
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
S + + V +++ M+ KCGNM+++ +F+ M +R++ S+ SM+ G + +G A +A+
Sbjct: 270 RSF-LKEIFVANSILAMHTKCGNMEKSCLIFDMMDERNVISWNSMLSGYTQNGQASEALF 328
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSH-GRLVEEGKHYFETMKSKYSMVPSPEHYACMVDL 259
LF+KM + G P++ +++ AC++ G GK + + SK + + + ++D+
Sbjct: 329 LFDKMRDSGCEPNSVTALIMVAACAYLGSRHLGGKFHDFILDSKMKIDMNLRN--ALMDM 386
Query: 260 LSRSGQLKEAYELLKSM-PVESHASAWGALLGACKFYGEVELGEIVANRLFE--LEPENS 316
++ G LK A E+ + P E + S+W L+ +G + + +R+ E +EP +
Sbjct: 387 YAKCGDLKTAVEMFNDVHPSERNVSSWNVLISGYGMHGHGKEALRLYSRMQEESVEPNHI 446
Query: 317 SPYVLLSS 324
+ +LS+
Sbjct: 447 TFTSILSA 454
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 142/278 (51%), Gaps = 42/278 (15%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGD----LINARK--------------------- 36
+ +++F +MP ++L W AM+ +G LI RK
Sbjct: 193 DGRKIFDEMPVKDLVCWTAMITAYEQGEKPDEALILLRKMQQHGLFPDEVTMVSVASAIG 252
Query: 37 -VFDDMPERDVVSFTV-------------MIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
++D + V ++ + ++ + K G++ + +FD +R+ W+
Sbjct: 253 QLWDAKWAQSVHAYAIRRSFLKEIFVANSILAMHTKCGNMEKSCLIFDMMDERNVISWNS 312
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
++SGY QNG +EAL +F M +P+ + +++AC+ +G+ L ++ S
Sbjct: 313 MLSGYTQNGQASEALFLFDKMRDSGCEPNSVTALIMVAACAYLGSRHLGGKFHDFILDSK 372
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEM--PKRDLFSYCSMIQGLSIHGYAEQAVG 200
+ I ++ AL+DM AKCG++ A ++F ++ +R++ S+ +I G +HG+ ++A+
Sbjct: 373 MKI-DMNLRNALMDMYAKCGDLKTAVEMFNDVHPSERNVSSWNVLISGYGMHGHGKEALR 431
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE 238
L+++M E + P++ FT IL+ACSH L++EG++ E
Sbjct: 432 LYSRMQEESVEPNHITFTSILSACSHAGLIDEGRNLKE 469
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 84/176 (47%), Gaps = 5/176 (2%)
Query: 52 MIDGYAKVGDIASARALFD----KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN 107
+I YAK G + AR+LFD + R +FLW+ +I YA GL E L+++ M
Sbjct: 76 IIIKYAKFGYLNCARSLFDGINIRGDNRSSFLWNTMIRAYANAGLCFETLELYMLMRRAG 135
Query: 108 VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRA 167
V + Y + AC+ L K ++ D +V AAL+DM AKCG
Sbjct: 136 VSSNNYTFPFIFKACASNSLLLQGKVAHGDAVKADFD-SDVYVKAALVDMYAKCGQFCDG 194
Query: 168 NKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
K+F+EMP +DL + +MI ++A+ L KM GL PD + +A
Sbjct: 195 RKIFDEMPVKDLVCWTAMITAYEQGEKPDEALILLRKMQQHGLFPDEVTMVSVASA 250
>29751.m001864 pentatricopeptide repeat-containing protein, putative
Length = 414
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 130/225 (57%), Gaps = 4/225 (1%)
Query: 24 GLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
L+K G I+A ++ E V T ++D YA+ G ++ A +F + ++ WS +
Sbjct: 190 SLLKKGKEIHA-QILRRGYEAHVHIMTTLVDMYARFGYVSYASCVFSEMSVKNVVSWSAM 248
Query: 84 ISGYAQNGLPNEALKIFQGM--ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
I+ YA+NG P EAL++F+ M E ++ P+ MVS++ AC+ + L+ K + Y+ +
Sbjct: 249 IACYAKNGRPFEALELFREMMLETKDMCPNSVTMVSVLQACAALAALEQGKLLHGYILRR 308
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+D V+++L+ M A+CG + A +F++M KRD+ S+ S+I +HG+ ++A+ +
Sbjct: 309 GLD-SILPVISSLVTMYARCGKLQLAQHVFDQMDKRDVVSWNSLISSYGVHGFGKKAIQI 367
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSM 246
F M G+ P +F +L ACSH LVEEGK FE+M Y +
Sbjct: 368 FKDMTRNGVFPSPISFVSVLGACSHAGLVEEGKILFESMHKDYGI 412
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 142/312 (45%), Gaps = 46/312 (14%)
Query: 35 RKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPN 94
+ + D+ ++D T +I+ Y+ G I +AR +FDK R ++++ L G
Sbjct: 95 QHLLDNGFDQDPFLATKLINMYSSFGSIDNARKVFDKTRSRTLYVYNALFRALTLVGNGE 154
Query: 95 EALKIFQGMELMNVKPDEYIMVSLMSAC----SQVGNLDLAKWVDCYLSQSSIDIGQTHV 150
E L++++ M + + D + ++ AC S + L K + + + + H+
Sbjct: 155 EVLRLYRRMNSIGMPSDRFTYTYVLKACVASNSLLSLLKKGKEIHAQILRRGYE-AHVHI 213
Query: 151 VAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEG- 209
+ L+DM A+ G + A+ +F EM +++ S+ +MI + +G +A+ LF +M+ E
Sbjct: 214 MTTLVDMYARFGYVSYASCVFSEMSVKNVVSWSAMIACYAKNGRPFEALELFREMMLETK 273
Query: 210 -LIPDNAAFTVILTACSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDLLSRSGQL 266
+ P++ +L AC+ +E+GK H + + S++P + +V + +R G+L
Sbjct: 274 DMCPNSVTMVSVLQACAALAALEQGKLLHGYILRRGLDSILPV---ISSLVTMYARCGKL 330
Query: 267 -------------------------------KEAYELLKSMP---VESHASAWGALLGAC 292
K+A ++ K M V ++ ++LGAC
Sbjct: 331 QLAQHVFDQMDKRDVVSWNSLISSYGVHGFGKKAIQIFKDMTRNGVFPSPISFVSVLGAC 390
Query: 293 KFYGEVELGEIV 304
G VE G+I+
Sbjct: 391 SHAGLVEEGKIL 402
>30162.m001294 pentatricopeptide repeat-containing protein, putative
Length = 436
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 148/292 (50%), Gaps = 44/292 (15%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGG-------------------------------LVKGG 29
D A +F QMPERN+ SW M+ +++
Sbjct: 109 DEALTLFDQMPERNVVSWTTMISAFSNAKLNDKALEFLICMLREGVKPNVYTYSSILRAC 168
Query: 30 D-LINARKVFDDMP----ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLI 84
D + N R++ ++ + DV + +ID Y+K G+ +A +F++ D +W+ +I
Sbjct: 169 DGVYNLRQLHGNIIKSGLDSDVYVRSALIDIYSKWGESENALYVFNEMVTGDLIVWNSII 228
Query: 85 SGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
+G+AQN +EAL +F+ M+ ++ + S++ AC+ + L+L + V ++ + D
Sbjct: 229 AGFAQNNDGDEALNLFKSMKRNGFPANQSALTSVLRACTGLALLELGRQVHVHVFKHDQD 288
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
+ + AL+DM KCG+++ AN +F M ++D+ S+ +MI G + +GY+ +A+ LF
Sbjct: 289 LVLNN---ALLDMYCKCGSLEDANYVFTRMVEKDVISWSTMIAGFAQNGYSREALKLFES 345
Query: 205 MLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK-----SKYSMVPSPE 251
M G P+ +L ACSH L+E G HYF +MK S+ S PS +
Sbjct: 346 MKVSGTKPNYITILGVLFACSHAGLLEAGWHYFRSMKKLFGRSRKSRRPSLQ 397
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 123/248 (49%), Gaps = 10/248 (4%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
++ ++++ Y K + A LFD+ P+R+ W+ +IS ++ L ++AL+ M
Sbjct: 91 NIFLINMLLNMYVKFNLLDEALTLFDQMPERNVVSWTTMISAFSNAKLNDKALEFLICML 150
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
VKP+ Y S++ AC V NL + + + +S +D +V +ALID+ +K G
Sbjct: 151 REGVKPNVYTYSSILRACDGVYNL---RQLHGNIIKSGLD-SDVYVRSALIDIYSKWGES 206
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
+ A +F EM DL + S+I G + + ++A+ LF M G + +A T +L AC
Sbjct: 207 ENALYVFNEMVTGDLIVWNSIIAGFAQNNDGDEALNLFKSMKRNGFPANQSALTSVLRAC 266
Query: 225 SHGRLVEEGKH-YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHAS 283
+ L+E G+ + K +V + ++D+ + G L++A + M VE
Sbjct: 267 TGLALLELGRQVHVHVFKHDQDLVLNN----ALLDMYCKCGSLEDANYVFTRM-VEKDVI 321
Query: 284 AWGALLGA 291
+W ++
Sbjct: 322 SWSTMIAG 329
>30138.m004070 pentatricopeptide repeat-containing protein, putative
Length = 335
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 126/219 (57%), Gaps = 4/219 (1%)
Query: 28 GGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGY 87
GG ++AR + D + D + T ++D Y+ A +FD+ P+RD W+VLIS +
Sbjct: 48 GGVQVHARLLRDGF-QSDSLLLTNLMDLYSFCEKGTEACRVFDEIPQRDTVAWNVLISCF 106
Query: 88 AQNGLPNEALKIFQGMEL--MNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI 145
+N + L +F M +PD+ + L+ ACS +G L+ + V Y+ Q
Sbjct: 107 IRNQRTRDVLGLFDDMVSGEFGCEPDDVTCLLLVQACSNLGALEFGEKVHLYI-QGHRYG 165
Query: 146 GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM 205
+T++ +LI M ++CG +D+A +F+ MP +++ ++ +MI G +++GY QA+ F KM
Sbjct: 166 DKTNLCNSLITMYSRCGCLDKAYGVFKNMPNKNVVTWSAMISGFAMNGYGRQAIETFGKM 225
Query: 206 LNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKY 244
G++PD+ FT +L+ACSH LV+EG +F+ M ++
Sbjct: 226 QRIGVLPDDQTFTGVLSACSHCGLVDEGMLFFDKMTQEF 264
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 95/210 (45%), Gaps = 7/210 (3%)
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+I Y+ + P E ++Q M ++ D + ++ +V +L V L +
Sbjct: 1 MIRAYSMSSSPIEGFYLYQEMRQKGLRADPLSLSFVIKCFVKVSSLMGGVQVHARLLRDG 60
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ ++ L+D+ + C A ++F+E+P+RD ++ +I + +GLF
Sbjct: 61 FQ-SDSLLLTNLMDLYSFCEKGTEACRVFDEIPQRDTVAWNVLISCFIRNQRTRDVLGLF 119
Query: 203 NKMLNE--GLIPDNAAFTVILTACSHGRLVEEG-KHYFETMKSKYSMVPSPEHYACMVDL 259
+ M++ G PD+ +++ ACS+ +E G K + +Y ++ +
Sbjct: 120 DDMVSGEFGCEPDDVTCLLLVQACSNLGALEFGEKVHLYIQGHRYG--DKTNLCNSLITM 177
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALL 289
SR G L +AY + K+MP + W A++
Sbjct: 178 YSRCGCLDKAYGVFKNMP-NKNVVTWSAMI 206
>29686.m000882 pentatricopeptide repeat-containing protein, putative
Length = 563
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 125/264 (47%), Gaps = 40/264 (15%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER-----DVVSFTVM---- 52
A+ +F M R + +WN+M+ G V+ GD A+ +F M + DV V+
Sbjct: 296 TARVIFDGMGSRTVVTWNSMIAGCVENGDPEEAKVLFKKMMDEGLQPTDVTVMEVLHACA 355
Query: 53 ------------------------------IDGYAKVGDIASARALFDKAPKRDAFLWSV 82
I Y+K + A LF+ R W+
Sbjct: 356 DSGDLEQGKFVHKLVEDLKLDSNVSVMNSLISMYSKCKQVDFAANLFENLQNRTLVSWNA 415
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+I GYAQNG NEAL F M+ N+KPD + MVS++ A +++ AKW+ + +
Sbjct: 416 MILGYAQNGRLNEALNFFCEMQSQNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRL 475
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+D V+ AL+DM AKCG + A KLF M +R + ++ SMI HG ++AV LF
Sbjct: 476 LD-DTVFVMTALVDMYAKCGAIHTARKLFNMMSERHVITWNSMIDAYGTHGLGKEAVQLF 534
Query: 203 NKMLNEGLIPDNAAFTVILTACSH 226
+M + P++ F +L+ACSH
Sbjct: 535 VEMQKGTIKPNDVTFLCVLSACSH 558
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 158/356 (44%), Gaps = 45/356 (12%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGG----DLINARKVFDDMPERDVVSF-------- 49
+A ++F +M ER+L WN ++ G + G L K+F++ D V+
Sbjct: 195 DAYKMFDRMTERDLVCWNTIISGYAQNGLTKVALELVPKIFEEGHRPDSVTIVSVLPAVA 254
Query: 50 ---------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
T ++D Y+K + +AR +FD R W+
Sbjct: 255 DIRSLRFGKAIHAYVIRAGFDWLVNISTALVDMYSKCDSLGTARVIFDGMGSRTVVTWNS 314
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+I+G +NG P EA +F+ M ++P + ++ ++ AC+ G+L+ K+V +
Sbjct: 315 MIAGCVENGDPEEAKVLFKKMMDEGLQPTDVTVMEVLHACADSGDLEQGKFVHKLVEDLK 374
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+D V+ +LI M +KC +D A LFE + R L S+ +MI G + +G +A+ F
Sbjct: 375 LD-SNVSVMNSLISMYSKCKQVDFAANLFENLQNRTLVSWNAMILGYAQNGRLNEALNFF 433
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
+M ++ + PD+ ++ A + + + K + + + + + +VD+ ++
Sbjct: 434 CEMQSQNIKPDSFTMVSVIPALAELSIPRQAK-WIHGLVIRRLLDDTVFVMTALVDMYAK 492
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
G + A +L M E H W +++ A YG LG+ E++ P
Sbjct: 493 CGAIHTARKLFNMMS-ERHVITWNSMIDA---YGTHGLGKEAVQLFVEMQKGTIKP 544
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 146/290 (50%), Gaps = 12/290 (4%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
++ + T ++ Y K I A +FD+ +RD W+ +ISGYAQNGL AL++ +
Sbjct: 176 NLFAMTAVVSLYCKCRVIGDAYKMFDRMTERDLVCWNTIISGYAQNGLTKVALELVPKIF 235
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
+PD +VS++ A + + +L K + Y+ ++ D ++ AL+DM +KC ++
Sbjct: 236 EEGHRPDSVTIVSVLPAVADIRSLRFGKAIHAYVIRAGFD-WLVNISTALVDMYSKCDSL 294
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
A +F+ M R + ++ SMI G +G E+A LF KM++EGL P + +L AC
Sbjct: 295 GTARVIFDGMGSRTVVTWNSMIAGCVENGDPEEAKVLFKKMMDEGLQPTDVTVMEVLHAC 354
Query: 225 SHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASA 284
+ +E+GK + + + + ++ + S+ Q+ A L +++ + S
Sbjct: 355 ADSGDLEQGK-FVHKLVEDLKLDSNVSVMNSLISMYSKCKQVDFAANLFENLQNRTLVS- 412
Query: 285 WGALLGACKFYGEVELGEI--VANRLFELEPENSSP--YVLLSSIYAAAD 330
W A++ G + G + N E++ +N P + ++S I A A+
Sbjct: 413 WNAMI-----LGYAQNGRLNEALNFFCEMQSQNIKPDSFTMVSVIPALAE 457
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 131/285 (45%), Gaps = 12/285 (4%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T +I + G + A +F+ + L+ ++ G+A+N + AL F M+ NV+
Sbjct: 80 TKLISLFCNYGSLTEAARVFEPIENKLEALYHTMLKGFAKNSSLDSALLFFCRMKHDNVR 139
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
P Y L++ C +L K + L S + A++ + KC + A K
Sbjct: 140 PVVYNFTYLLTLCGDNFDLRRGKEIHGQLITSGFS-WNLFAMTAVVSLYCKCRVIGDAYK 198
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
+F+ M +RDL + ++I G + +G + A+ L K+ EG PD+ +L A + R
Sbjct: 199 MFDRMTERDLVCWNTIISGYAQNGLTKVALELVPKIFEEGHRPDSVTIVSVLPAVADIRS 258
Query: 230 VEEGK--HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGA 287
+ GK H + +++ + + + +VD+ S+ L A + M + W +
Sbjct: 259 LRFGKAIHAY-VIRAGFDWLVNIS--TALVDMYSKCDSLGTARVIFDGMGSRT-VVTWNS 314
Query: 288 LLGACKFYGEVELGEIVANRLFE--LEPENSSPYVLLSSIYAAAD 330
++ C G+ E +++ ++ + L+P + + ++ ++A AD
Sbjct: 315 MIAGCVENGDPEEAKVLFKKMMDEGLQPTDVT---VMEVLHACAD 356
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 70/165 (42%), Gaps = 39/165 (23%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERD--------------- 45
D A +F + R L SWNAM+ G + G L A F +M ++
Sbjct: 396 DFAANLFENLQNRTLVSWNAMILGYAQNGRLNEALNFFCEMQSQNIKPDSFTMVSVIPAL 455
Query: 46 ------------------------VVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
V T ++D YAK G I +AR LF+ +R W+
Sbjct: 456 AELSIPRQAKWIHGLVIRRLLDDTVFVMTALVDMYAKCGAIHTARKLFNMMSERHVITWN 515
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVG 126
+I Y +GL EA+++F M+ +KP++ + ++SACS G
Sbjct: 516 SMIDAYGTHGLGKEAVQLFVEMQKGTIKPNDVTFLCVLSACSHSG 560
>30147.m013888 pentatricopeptide repeat-containing protein, putative
Length = 428
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 149/311 (47%), Gaps = 41/311 (13%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER-----DVVSFTVMIDG-- 55
A +VF + E ++ WN+M+ G G ++F+ M E D + +I G
Sbjct: 64 ASKVFKGIFEPDMVLWNSMISGYSYCGFWNKGLELFNQMRENRKQQPDGFTLVGLISGLM 123
Query: 56 ---------------------------------YAKVGDIASARALFDKAPKRDAFLWSV 82
Y++ I SA +F + D WS
Sbjct: 124 DFSLLRIGQGVHGLCLKTGFNCNAYVGSALVSMYSRFKCINSAYNVFSSLCQPDLVAWSA 183
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
LI+GY+Q+G N+AL + K D ++ S++ A +++ +L + Y+ +
Sbjct: 184 LITGYSQSGDYNKALVFCTNLCGEGKKADPVLIASVLVAAARLADLGHGTEIHGYVLRHG 243
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ V +ALIDM KCG + ++F+ + +++ SY S+I GL +HG A QA LF
Sbjct: 244 FE-SDIMVSSALIDMYMKCGLVGWGIRVFDNIRNQNIISYNSVILGLGLHGLAAQAFELF 302
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
+ML +GL PD + F+ +L AC H LV++G ++ M ++ + P EHY +V LL
Sbjct: 303 EEMLEKGLKPDESTFSTLLCACCHAGLVKDGWRIYKQMMDEFCIPPRTEHYVHIVKLLGM 362
Query: 263 SGQLKEAYELL 273
+G+L++AY+ +
Sbjct: 363 AGELEKAYDFI 373
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 91/190 (47%), Gaps = 4/190 (2%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM- 103
D VS + ++ Y+K+ + A +F + D LW+ +ISGY+ G N+ L++F M
Sbjct: 44 DSVSCSALVTAYSKMNYVREASKVFKGIFEPDMVLWNSMISGYSYCGFWNKGLELFNQMR 103
Query: 104 ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGN 163
E +PD + +V L+S L + + V ++ + +V +AL+ M ++
Sbjct: 104 ENRKQQPDGFTLVGLISGLMDFSLLRIGQGVHGLCLKTGFNC-NAYVGSALVSMYSRFKC 162
Query: 164 MDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
++ A +F + + DL ++ ++I G S G +A+ + EG D +L A
Sbjct: 163 INSAYNVFSSLCQPDLVAWSALITGYSQSGDYNKALVFCTNLCGEGKKADPVLIASVLVA 222
Query: 224 CSHGRLVEEG 233
+ RL + G
Sbjct: 223 AA--RLADLG 230
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 104/236 (44%), Gaps = 6/236 (2%)
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
M + +KPD Y L+ AC + +LD + + + S + I +AL+ +K
Sbjct: 1 MLVTGIKPDNYTHACLIRACHENFDLDGLRVLHGGVIVSGLGIDSVS-CSALVTAYSKMN 59
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML-NEGLIPDNAAFTVIL 221
+ A+K+F+ + + D+ + SMI G S G+ + + LFN+M N PD ++
Sbjct: 60 YVREASKVFKGIFEPDMVLWNSMISGYSYCGFWNKGLELFNQMRENRKQQPDGFTLVGLI 119
Query: 222 TACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESH 281
+ L+ G+ + K + + +V + SR + AY + S+ +
Sbjct: 120 SGLMDFSLLRIGQG-VHGLCLKTGFNCNAYVGSALVSMYSRFKCINSAYNVFSSL-CQPD 177
Query: 282 ASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSH 337
AW AL+ G+ + L E + + P VL++S+ AA + D+ H
Sbjct: 178 LVAWSALITGYSQSGDYNKALVFCTNLCG-EGKKADP-VLIASVLVAAARLADLGH 231
>30146.m003562 pentatricopeptide repeat-containing protein, putative
Length = 472
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 144/289 (49%), Gaps = 44/289 (15%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGL------------------------------------- 25
A+ +F ++P+RNL WN ++ G
Sbjct: 141 ARLLFDKIPKRNLFLWNVLIRGYAWYGPYEASIQLYYKIFDYGLVPDNFTFPFVLKACSA 200
Query: 26 ---VKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
++ G LI+ +V ERDV +ID Y+K G + +AR +F K P RDA LW+
Sbjct: 201 LSAIEDGRLIH-EQVMRSGWERDVFVGAALIDMYSKCGCVDNAREVFHKFPVRDAVLWNS 259
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+++ Y+QNG P+++L + M L V+P E +V+++SA + + L + + + +
Sbjct: 260 MLAAYSQNGKPDKSLALCSEMVLAGVRPTEATLVTVISASADIAALPQGRELHGFAWRRR 319
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ V LIDM AKCG M A LFE++ +++ S+ ++I G ++HGY+ + + LF
Sbjct: 320 FE-SNDKVKTTLIDMYAKCGTMKVAQNLFEQLRDKNVVSWNAIITGYAMHGYSNEVLILF 378
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVE-EGKHYFETMKSKYSMVPSP 250
++M E PD+ F +L ACS+G L++ E Y +M+ + P
Sbjct: 379 DRMREEAK-PDHITFVGVLLACSNGGLLDKEFPRYDRSMEESVAASSHP 426
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 134/261 (51%), Gaps = 7/261 (2%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+++ Y + AR LFDK PKR+ FLW+VLI GYA G +++++ + + PD
Sbjct: 128 LVNLYCICNSLCEARLLFDKIPKRNLFLWNVLIRGYAWYGPYEASIQLYYKIFDYGLVPD 187
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
+ ++ ACS + ++ + + + +S + V AALIDM +KCG +D A ++F
Sbjct: 188 NFTFPFVLKACSALSAIEDGRLIHEQVMRSGWE-RDVFVGAALIDMYSKCGCVDNAREVF 246
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
+ P RD + SM+ S +G ++++ L ++M+ G+ P A +++A + +
Sbjct: 247 HKFPVRDAVLWNSMLAAYSQNGKPDKSLALCSEMVLAGVRPTEATLVTVISASADIAALP 306
Query: 232 EGK--HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
+G+ H F + S + + ++D+ ++ G +K A L + + + + +W A++
Sbjct: 307 QGRELHGFAWRRRFES---NDKVKTTLIDMYAKCGTMKVAQNLFEQL-RDKNVVSWNAII 362
Query: 290 GACKFYGEVELGEIVANRLFE 310
+G I+ +R+ E
Sbjct: 363 TGYAMHGYSNEVLILFDRMRE 383
>30059.m000463 pentatricopeptide repeat-containing protein, putative
Length = 341
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 100/157 (63%), Gaps = 1/157 (0%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
YA G SA LF+ P RD W+ ISG+A NG PNEALK++ M L V+PD + +
Sbjct: 185 YAACGQYESAHKLFEFMPDRDLVAWNTAISGFALNGKPNEALKLYMEMGLEGVEPDGFTL 244
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
VSL+SAC+++G L L + + Y+ + +D H +LID+ AKCG + A ++F+EM
Sbjct: 245 VSLLSACAELGALALGRRIHAYMVKVGLD-ENLHANNSLIDLYAKCGRIRDAQQVFDEME 303
Query: 176 KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIP 212
R++ S+ S+I GL+++G+ +A+ F +M +GL+P
Sbjct: 304 LRNVVSWTSLIVGLAVNGFGMEAIEHFKEMEKQGLVP 340
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 117/225 (52%), Gaps = 3/225 (1%)
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
A +F + F W+ +I G+A++ P A++++ + +++PD + L+ A S+
Sbjct: 93 AHNIFTLIQNPNIFTWNTMIRGHAESENPKPAIELYHRLHFNSIEPDTHTYPFLLKAVSK 152
Query: 125 VGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCS 184
+ N+ + + + ++ + V +L+ M A CG + A+KLFE MP RDL ++ +
Sbjct: 153 MVNVRVGEKIHSISIRNGFE-SLVFVQNSLMHMYAACGQYESAHKLFEFMPDRDLVAWNT 211
Query: 185 MIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKY 244
I G +++G +A+ L+ +M EG+ PD +L+AC+ + G+ M K
Sbjct: 212 AISGFALNGKPNEALKLYMEMGLEGVEPDGFTLVSLLSACAELGALALGRRIHAYM-VKV 270
Query: 245 SMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
+ + ++DL ++ G++++A ++ M + + S W +L+
Sbjct: 271 GLDENLHANNSLIDLYAKCGRIRDAQQVFDEMELRNVVS-WTSLI 314
>29742.m001443 pentatricopeptide repeat-containing protein, putative
Length = 695
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 127/232 (54%), Gaps = 9/232 (3%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAK 58
++ VF M RN+ +WN+++ G G +A+++ + M E D+V++ ++ GY+
Sbjct: 456 SQAVFDNMKNRNIVAWNSLITGYAYKGLFDDAKRLLNKMKEEGIRADIVTWNGLVSGYSI 515
Query: 59 VGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYI 114
G A A+ ++ + W+ LISG +QNG E+L+ F M+ +KP+
Sbjct: 516 WGHNEEALAVINEIKSSGLTPNVVSWTALISGCSQNGNYKESLEFFIQMQQEGIKPNSTT 575
Query: 115 MVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM 174
+ SL+ C + L K + C LS S G ++ AL+DM +K GN+ A ++F+
Sbjct: 576 VSSLLKTCGGLSLLKKGKEIHC-LSVKSGFTGDIYIATALVDMYSKSGNLKSAREVFKRT 634
Query: 175 PKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH 226
+ L + MI G +I+G ++A+ L+++ML G++PD+ FT +L+AC +
Sbjct: 635 KNKTLACWNCMIMGFAIYGLGKEAISLYDEMLGAGILPDSITFTALLSACKN 686
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 156/358 (43%), Gaps = 75/358 (20%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK 71
E NL N+++ + G +I +R+VFD M + ++ S+ +I Y +G + A LF +
Sbjct: 298 ESNLWISNSLISMYSRNGKIILSRRVFDSMKDHNLSSWNSIISSYTALGYLNGAWKLFHE 357
Query: 72 ----APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGN 127
+ K D W+ L+SG+A +G E L I Q M++ +P+ + S++ +++
Sbjct: 358 MESSSVKPDIITWNCLLSGHALHGSYKEVLMILQKMQVTGFRPNSSSITSVLQTVTELRL 417
Query: 128 LDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMI- 186
L + K + Y+ ++ ++ +V A+L+DM K + + +F+ M R++ ++ S+I
Sbjct: 418 LKIGKGIHGYVIRNRLN-PDLYVEASLLDMYVKNNCLATSQAVFDNMKNRNIVAWNSLIT 476
Query: 187 ----------------------------------QGLSIHGYAEQAVGLFNKMLNEGLIP 212
G SI G+ E+A+ + N++ + GL P
Sbjct: 477 GYAYKGLFDDAKRLLNKMKEEGIRADIVTWNGLVSGYSIWGHNEEALAVINEIKSSGLTP 536
Query: 213 DNAAFTVILTACSHGRLVEEGKHYFETMKSK------------------YSMVPSPEHYA 254
+ ++T +++ CS +E +F M+ + S++ +
Sbjct: 537 NVVSWTALISGCSQNGNYKESLEFFIQMQQEGIKPNSTTVSSLLKTCGGLSLLKKGKEIH 596
Query: 255 C----------------MVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYG 296
C +VD+ S+SG LK A E+ K ++ A W ++ YG
Sbjct: 597 CLSVKSGFTGDIYIATALVDMYSKSGNLKSAREVFKRTKNKTLA-CWNCMIMGFAIYG 653
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 154/343 (44%), Gaps = 26/343 (7%)
Query: 13 RNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKA 72
+ L S NAM L+K + N+ D R +I Y ++GD S+ +F
Sbjct: 76 KTLDSINAMHAQLIKTCSMWNS-----DSNAR------TLITSYLELGDFRSSAMVFFVG 124
Query: 73 PKRDAFLWSVLISGYAQ-NGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA 131
R+ +WS + + G P + L +F+ + V D ++ ++ C +V +L L
Sbjct: 125 FARNYVMWSSFMEEFENCGGDPIQVLNVFKELHSKGVTFDSGMVTVVLKICIRVMDLWLG 184
Query: 132 KWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRD-LFSYCSMIQGLS 190
V L + ++ T+V +AL+ +C +++ AN++F +MP RD LF +++ L
Sbjct: 185 LEVHASLIKRGFEL-DTYVRSALLSYYERCWSLEIANQVFHDMPDRDGLFWNEAIMINLK 243
Query: 191 IHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSP 250
+ A+ LF M D + +L AC + EGK K+++ +
Sbjct: 244 NERFG-NAIELFRGMQFSFAKADASTVLKMLQACGKEEALNEGKQ-IHGYVIKHALESNL 301
Query: 251 EHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLF- 309
++ + SR+G++ + + SM + + S+W +++ + G + A +LF
Sbjct: 302 WISNSLISMYSRNGKIILSRRVFDSMK-DHNLSSWNSIISSYTALGYLN----GAWKLFH 356
Query: 310 ELEPENSSPYVL----LSSIYAAADQWLDVSHVKNKMKERGLR 348
E+E + P ++ L S +A + +V + KM+ G R
Sbjct: 357 EMESSSVKPDIITWNCLLSGHALHGSYKEVLMILQKMQVTGFR 399
>28196.m000203 pentatricopeptide repeat-containing protein, putative
Length = 468
Score = 130 bits (327), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 100/164 (60%), Gaps = 1/164 (0%)
Query: 51 VMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKP 110
+I Y+K GD+ SAR LFD R W+ +ISGYA+ G +EALK+F ME KP
Sbjct: 282 TLISMYSKFGDVYSARCLFDSMCNRSCVTWTSMISGYAEKGNMDEALKLFNAMEAAGEKP 341
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
D ++S++S C Q G L++ KW+ Y + + V ALIDM AKCG++D A L
Sbjct: 342 DLVTVLSVISGCGQTGILEVGKWIHVYADSNCLK-HNVVVCNALIDMYAKCGSIDDAWDL 400
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDN 214
F MP R + ++ +MI G +++G ++++ LF +M++ GL P++
Sbjct: 401 FNTMPDRTVVTWTTMIAGCALNGLFKESLDLFYQMIDFGLKPNH 444
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 152/340 (44%), Gaps = 50/340 (14%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PE----------- 43
D A VFV+MP+R++TSWNAM+ G + G +F +M P+
Sbjct: 90 DIAYNVFVKMPKRDVTSWNAMLLGFAQLGFSERVFCMFREMRFAGVFPDSVTLMGVSGAI 149
Query: 44 ---------RDVVSFTVMI-------------DGYAKVGDIASARALFD--KAPKRDAFL 79
+ V SF + I YAK D+A A ++F+ + R
Sbjct: 150 SCMKDLELAKSVHSFGIRIGIHNDVSVANTWISLYAKCYDLAMAESVFNGIEVGLRSVVS 209
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLS 139
W+ +I+GYA +AL ++ M PD +V+L+S+C Q + V +
Sbjct: 210 WNSMIAGYAYLEKRIDALNSYKRMLHDGFMPDISTIVTLLSSCLQPEAVRQGMQVHSHGI 269
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAV 199
+ D + HV LI M +K G++ A LF+ M R ++ SMI G + G ++A+
Sbjct: 270 RFGCD-SEIHVANTLISMYSKFGDVYSARCLFDSMCNRSCVTWTSMISGYAEKGNMDEAL 328
Query: 200 GLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH---YFETMKSKYSMVPSPEHYACM 256
LFN M G PD +++ C ++E GK Y ++ K+++V +
Sbjct: 329 KLFNAMEAAGEKPDLVTVLSVISGCGQTGILEVGKWIHVYADSNCLKHNVVVCNA----L 384
Query: 257 VDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYG 296
+D+ ++ G + +A++L +MP + W ++ C G
Sbjct: 385 IDMYAKCGSIDDAWDLFNTMP-DRTVVTWTTMIAGCALNG 423
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 15/192 (7%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T ++D K + A +F K PKRD W+ ++ G+AQ G +F+ M V
Sbjct: 77 TALLDMCVKCHQLDIAYNVFVKMPKRDVTSWNAMLLGFAQLGFSERVFCMFREMRFAGVF 136
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG---QTHVVAALIDMNAKCGNMDR 166
PD ++ + A S + +L+LAK V + I IG V I + AKC ++
Sbjct: 137 PDSVTLMGVSGAISCMKDLELAKSVHSF----GIRIGIHNDVSVANTWISLYAKCYDLAM 192
Query: 167 ANKLFE--EMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN---KMLNEGLIPDNAAFTVIL 221
A +F E+ R + S+ SMI G + Y E+ + N +ML++G +PD + +L
Sbjct: 193 AESVFNGIEVGLRSVVSWNSMIAG---YAYLEKRIDALNSYKRMLHDGFMPDISTIVTLL 249
Query: 222 TACSHGRLVEEG 233
++C V +G
Sbjct: 250 SSCLQPEAVRQG 261
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
Query: 94 NEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAA 153
++A+ +F+ ++ ++P+ + ++ AC+++ NL ++ + ++ +S V A
Sbjct: 20 HKAISLFRQLKQKGIEPNNFTFPFILKACAKLSNLHYSQVIHTHVIKSPF-YSNVFVQTA 78
Query: 154 LIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPD 213
L+DM KC +D A +F +MPKRD+ S+ +M+ G + G++E+ +F +M G+ PD
Sbjct: 79 LLDMCVKCHQLDIAYNVFVKMPKRDVTSWNAMLLGFAQLGFSERVFCMFREMRFAGVFPD 138
Query: 214 NAAFTVILTACSHGRLVEEGK 234
+ + A S + +E K
Sbjct: 139 SVTLMGVSGAISCMKDLELAK 159
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 39/150 (26%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP------------------- 42
+A+ +F M R+ +W +M+ G + G++ A K+F+ M
Sbjct: 295 SARCLFDSMCNRSCVTWTSMISGYAEKGNMDEALKLFNAMEAAGEKPDLVTVLSVISGCG 354
Query: 43 --------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+ +VV +ID YAK G I A LF+ P R W+
Sbjct: 355 QTGILEVGKWIHVYADSNCLKHNVVVCNALIDMYAKCGSIDDAWDLFNTMPDRTVVTWTT 414
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDE 112
+I+G A NGL E+L +F M +KP+
Sbjct: 415 MIAGCALNGLFKESLDLFYQMIDFGLKPNH 444
>45882.m000013 pentatricopeptide repeat-containing protein, putative
Length = 563
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 159/336 (47%), Gaps = 46/336 (13%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----------------- 44
+A+RVF +M ++ SWN ++ G + + ++F +M +R
Sbjct: 187 DAQRVFNKMVVKDYVSWNTLICGYCQMELFEESIQLFREMVKRFRPDLLTITSVLRACGL 246
Query: 45 ---------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
DV + ++ID YAK GD+ ++R FD+ RD+ W+ L
Sbjct: 247 LRDLEFGKFVHDYILRSGIEFDVTASNIVIDTYAKCGDLLASRKAFDRIKCRDSVSWNTL 306
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I+GY Q+ E +K+F+ M+ M++KPD V+L+S +++ + +L K + C L++
Sbjct: 307 INGYIQSRSYGEGVKLFKKMK-MDLKPDSITFVTLLSISTRLADTELGKEIHCDLAKLGF 365
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
D V AL+DM +KCGN+ + K+FE M RD+ ++ ++I A + +
Sbjct: 366 D-SDLVVSNALVDMYSKCGNVKDSLKVFENMKVRDIVTWNTIIAACVQAEDCTLAFRMIS 424
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE-TMKSKY-SMVPSPEHYACMVDLLS 261
+M NE LIPD IL CS +GK T K + S VP ++++ S
Sbjct: 425 QMRNEELIPDMGTLLGILPICSLIAAKRQGKEVHACTFKFGFESTVPVGN---ALIEMYS 481
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
+ LK + + M + + W AL+ A YGE
Sbjct: 482 KCSNLKYCIRVFEDMKTKDVVT-WTALVSAYGMYGE 516
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 119/218 (54%), Gaps = 10/218 (4%)
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLS 139
W+ +I NGL ++AL ++ M+ NVKPD Y S+++AC+ +G+ ++ V ++
Sbjct: 1 WNSVIRALTHNGLFSKALDLYFKMKDFNVKPDTYTFPSVINACAALGDFEIGNVVQNHV- 59
Query: 140 QSSIDIG---QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAE 196
++IG ++ AL+DM A+ G++ +A +FEEM RD+ S+ S+I G S +GY +
Sbjct: 60 ---LEIGFGFDLYIGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYSANGYWD 116
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACM 256
+A+ ++ ++ GL PDN + +L AC V+EG+ + K M +
Sbjct: 117 EALEIYYELRIAGLKPDNFTLSSVLPACGGLLAVKEGE-VIHGLVEKLGMNIDVIMSNGL 175
Query: 257 VDLLSRSGQLKEAYELLKSMPVESHASAWGALL-GACK 293
+ + + G+L +A + M V+ + S W L+ G C+
Sbjct: 176 LSMYFKFGRLMDAQRVFNKMVVKDYVS-WNTLICGYCQ 212
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 124/281 (44%), Gaps = 47/281 (16%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP-------------------- 42
+++ F ++ R+ SWN ++ G ++ K+F M
Sbjct: 288 SRKAFDRIKCRDSVSWNTLINGYIQSRSYGEGVKLFKKMKMDLKPDSITFVTLLSISTRL 347
Query: 43 ------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLI 84
+ D+V ++D Y+K G++ + +F+ RD W+ +I
Sbjct: 348 ADTELGKEIHCDLAKLGFDSDLVVSNALVDMYSKCGNVKDSLKVFENMKVRDIVTWNTII 407
Query: 85 SGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVD-CYLS---Q 140
+ Q A ++ M + PD ++ ++ CS + K V C +
Sbjct: 408 AACVQAEDCTLAFRMISQMRNEELIPDMGTLLGILPICSLIAAKRQGKEVHACTFKFGFE 467
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
S++ +G ALI+M +KC N+ ++FE+M +D+ ++ +++ ++G ++A+
Sbjct: 468 STVPVGN-----ALIEMYSKCSNLKYCIRVFEDMKTKDVVTWTALVSAYGMYGEGKKALR 522
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
F +M G+IPD+ AF I+ ACSH VEEG F+ MK
Sbjct: 523 AFAEMEEAGIIPDHIAFVAIIYACSHSGSVEEGLACFDHMK 563
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 142/289 (49%), Gaps = 17/289 (5%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
++D YA+ GD+ AR +F++ RD W+ LISGY+ NG +EAL+I+ + + +KPD
Sbjct: 74 LVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYSANGYWDEALEIYYELRIAGLKPD 133
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
+ + S++ AC + + + + + + ++I + L+ M K G + A ++F
Sbjct: 134 NFTLSSVLPACGGLLAVKEGEVIHGLVEKLGMNI-DVIMSNGLLSMYFKFGRLMDAQRVF 192
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
+M +D S+ ++I G E+++ LF +M+ PD T +L AC R +E
Sbjct: 193 NKMVVKDYVSWNTLICGYCQMELFEESIQLFREMVKR-FRPDLLTITSVLRACGLLRDLE 251
Query: 232 EGKHYFE-TMKSKYSMVPSPEHYACMVDLLSRSGQL---KEAYELLKSMPVESHASAWGA 287
GK + ++S + + ++D ++ G L ++A++ +K + +W
Sbjct: 252 FGKFVHDYILRSGIEFDVTASNI--VIDTYAKCGDLLASRKAFDRIKC----RDSVSWNT 305
Query: 288 LLGA---CKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWL 333
L+ + YGE ++ +L+P++ + LLS AD L
Sbjct: 306 LINGYIQSRSYGEGV--KLFKKMKMDLKPDSITFVTLLSISTRLADTEL 352
>29912.m005398 pentatricopeptide repeat-containing protein, putative
Length = 885
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 134/276 (48%), Gaps = 42/276 (15%)
Query: 5 RVFVQMPERNLTSWNAMVGG-----------------LVKG------------------- 28
RVF M R+L SWNA++ G L++G
Sbjct: 452 RVFDTMTNRDLVSWNALLSGFYDFETSDQGLRIFCQMLMEGLVPNLYTFVGVLRSCSSLL 511
Query: 29 ----GDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLI 84
G ++A + + + D V T +ID YAK + A F+K RD F W+V+I
Sbjct: 512 NVWFGKQVHAHIIKNSLDGNDFVG-TALIDMYAKNRCLEDADVAFNKLTNRDLFTWTVII 570
Query: 85 SGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
+G++Q +A+K M +KP+E+ + S +S CS++ L + + L+ S
Sbjct: 571 AGHSQTDKAEKAVKYLGQMLREGIKPNEFTLASCLSGCSRMATLGNGQQLH-SLAIKSGH 629
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
G V +AL+DM KCG M+ A +F+ + RD ++ ++I G S HG ++A+ F
Sbjct: 630 SGDVFVSSALVDMYGKCGCMEDAEAIFKGLFSRDTVAWNTIICGYSQHGQGQKALEAFRM 689
Query: 205 MLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
ML+E + PD F +L ACS+ VEEGK +F+ M
Sbjct: 690 MLDEDIDPDEVTFIGVLAACSYMGWVEEGKKHFDLM 725
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 40/262 (15%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM--PERDVVSFTV--------- 51
A RVF MPE+N SWNA++ G + GD N K+F M E + ++T+
Sbjct: 248 ADRVFFGMPEKNNVSWNALLNGYAQRGDGKNVLKLFCRMLECEMNFTNYTLSTVLKGCAN 307
Query: 52 ----------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
++D Y+K G A +F+ + D WS +
Sbjct: 308 SGNLREGKALHSLSIRRAYELDEFLGCNLVDMYSKCGMAYEALKVFNMIEEPDIVAWSAI 367
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I+G Q G EA ++F M V+P+++ S++SA + VG+L L + + C + +
Sbjct: 368 ITGLDQQGHSQEAAELFHLMRQKGVRPNQFSFASVISAATNVGDLYLGQSIHCCICKYGY 427
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+ V ALI M K G + ++F+ M RDL S+ +++ G ++Q + +F
Sbjct: 428 E-SDNSVGNALITMYMKSGFVQDGIRVFDTMTNRDLVSWNALLSGFYDFETSDQGLRIFC 486
Query: 204 KMLNEGLIPDNAAFTVILTACS 225
+ML EGL+P+ F +L +CS
Sbjct: 487 QMLMEGLVPNLYTFVGVLRSCS 508
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 151/338 (44%), Gaps = 50/338 (14%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDGYAK 58
A +VF + E ++ +W+A++ GL + G A ++F M ++ V SF +I
Sbjct: 349 ALKVFNMIEEPDIVAWSAIITGLDQQGHSQEAAELFHLMRQKGVRPNQFSFASVISAATN 408
Query: 59 VGDIASARAL-----------------------------------FDKAPKRDAFLWSVL 83
VGD+ +++ FD RD W+ L
Sbjct: 409 VGDLYLGQSIHCCICKYGYESDNSVGNALITMYMKSGFVQDGIRVFDTMTNRDLVSWNAL 468
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
+SG+ ++ L+IF M + + P+ Y V ++ +CS + N+ K V ++ ++S+
Sbjct: 469 LSGFYDFETSDQGLRIFCQMLMEGLVPNLYTFVGVLRSCSSLLNVWFGKQVHAHIIKNSL 528
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
D G V ALIDM AK ++ A+ F ++ RDLF++ +I G S AE+AV
Sbjct: 529 D-GNDFVGTALIDMYAKNRCLEDADVAFNKLTNRDLFTWTVIIAGHSQTDKAEKAVKYLG 587
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE-TMKSKYS---MVPSPEHYACMVDL 259
+ML EG+ P+ L+ CS + G+ +KS +S V S +VD+
Sbjct: 588 QMLREGIKPNEFTLASCLSGCSRMATLGNGQQLHSLAIKSGHSGDVFVSSA-----LVDM 642
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
+ G +++A + K + AW ++ +G+
Sbjct: 643 YGKCGCMEDAEAIFKGL-FSRDTVAWNTIICGYSQHGQ 679
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 137/280 (48%), Gaps = 23/280 (8%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP 73
NL A+ G ++K G E D + +I+ YAK G +A AR +
Sbjct: 108 NLNEGTAIHGNVIKSG------------LEPDSHLWVSLINLYAKCGSLAFARKVLVGMR 155
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKW 133
+RD W+ LI+GY G ++ +K + M N+ P+E+ + +++ A S ++ K
Sbjct: 156 ERDVVSWTALIAGYVSEGCGSDGVKAYCEMRKENICPNEFTLATVLKASSMCSDIKFGKL 215
Query: 134 VDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHG 193
+ ++ + + V +AL+D+ AK G M+ A+++F MP+++ S+ +++ G + G
Sbjct: 216 IHLEAIKTGLLL-DLFVGSALVDLYAKFGEMELADRVFFGMPEKNNVSWNALLNGYAQRG 274
Query: 194 YAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE-TMKSKYSMVPSPEH 252
+ + LF +ML + N + +L C++ + EGK +++ Y + E
Sbjct: 275 DGKNVLKLFCRMLECEMNFTNYTLSTVLKGCANSGNLREGKALHSLSIRRAYEL---DEF 331
Query: 253 YAC-MVDLLSRSGQLKEAYELLK--SMPVESHASAWGALL 289
C +VD+ S+ G AYE LK +M E AW A++
Sbjct: 332 LGCNLVDMYSKCGM---AYEALKVFNMIEEPDIVAWSAII 368
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 149/332 (44%), Gaps = 44/332 (13%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV--SFTV--------- 51
A++V V M ER++ SW A++ G V G + K + +M + ++ FT+
Sbjct: 147 ARKVLVGMRERDVVSWTALIAGYVSEGCGSDGVKAYCEMRKENICPNEFTLATVLKASSM 206
Query: 52 ----------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
++D YAK G++ A +F P+++ W+ L
Sbjct: 207 CSDIKFGKLIHLEAIKTGLLLDLFVGSALVDLYAKFGEMELADRVFFGMPEKNNVSWNAL 266
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
++GYAQ G LK+F M + Y + +++ C+ GNL K + + +
Sbjct: 267 LNGYAQRGDGKNVLKLFCRMLECEMNFTNYTLSTVLKGCANSGNLREGKALHSLSIRRAY 326
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
++ + + L+DM +KCG A K+F + + D+ ++ ++I GL G++++A LF+
Sbjct: 327 ELDE-FLGCNLVDMYSKCGMAYEALKVFNMIEEPDIVAWSAIITGLDQQGHSQEAAELFH 385
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
M +G+ P+ +F +++A ++ + G+ KY ++ + +S
Sbjct: 386 LMRQKGVRPNQFSFASVISAATNVGDLYLGQS-IHCCICKYGYESDNSVGNALITMYMKS 444
Query: 264 GQLKEAYELLKSMPVESHASAWGALLGACKFY 295
G +++ + +M S W ALL FY
Sbjct: 445 GFVQDGIRVFDTMTNRDLVS-WNALLSG--FY 473
>30026.m001450 pentatricopeptide repeat-containing protein, putative
Length = 640
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 160/338 (47%), Gaps = 52/338 (15%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM----PERDVVSFT-------- 50
A VF ++ R++ SWN+M+ G V +VF +M D+V+
Sbjct: 254 AYEVFDELKNRDIVSWNSMISGTVANDLPEKGIQVFKEMLYLGVSFDLVTLVNVLAACAN 313
Query: 51 ---------------------------VMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
++D Y+K GD+ +A +F K +R W+ L
Sbjct: 314 SGNFPLGRVLHAFAIKAQLDQRMTFVNTLLDMYSKCGDLNNAIRVFQKMGERSVVSWTSL 373
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I+GYA+ GL E +++F ME V+PD + + +++ AC+ G+L++ K V Y+ ++++
Sbjct: 374 IAGYAREGLSGEGIRLFHEMEREGVRPDNFTVTAVLHACACSGSLEIGKDVHDYVKENNM 433
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+ V +L+DM AKCG+M+ AN +F EMP +D+ S+ +MI G S +G + + LF
Sbjct: 434 QKDRI-VCNSLMDMYAKCGSMEDANLVFLEMPNKDIVSWNTMIGGYSKNGRPNETLHLFV 492
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYA-CMVDLLSR 262
M+ E L PD IL AC+ ++ G+ ++ H A ++D+ ++
Sbjct: 493 AMVQE-LKPDGRTMACILPACASLAALDRGREIHGYIQRNGCF--DDLHVANALIDMYAK 549
Query: 263 SGQLKEAYELLKSMPVESHASAWGALL-------GACK 293
G L A +PV+ S W ++ G CK
Sbjct: 550 CGALALARLFFDMIPVKDLIS-WTVMIAGDIDERGICK 586
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 131/240 (54%), Gaps = 3/240 (1%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I Y K I +A +FD+ RD W+ +ISG N LP + +++F+ M + V D
Sbjct: 241 LISFYFKTRKIEAAYEVFDELKNRDIVSWNSMISGTVANDLPEKGIQVFKEMLYLGVSFD 300
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
+V++++AC+ GN L + + + ++ +D T V L+DM +KCG+++ A ++F
Sbjct: 301 LVTLVNVLAACANSGNFPLGRVLHAFAIKAQLDQRMT-FVNTLLDMYSKCGDLNNAIRVF 359
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
++M +R + S+ S+I G + G + + + LF++M EG+ PDN T +L AC+ +E
Sbjct: 360 QKMGERSVVSWTSLIAGYAREGLSGEGIRLFHEMEREGVRPDNFTVTAVLHACACSGSLE 419
Query: 232 EGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
GK + +K +M ++D+ ++ G +++A + MP + S W ++G
Sbjct: 420 IGKDVHDYVKEN-NMQKDRIVCNSLMDMYAKCGSMEDANLVFLEMPNKDIVS-WNTMIGG 477
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 138/285 (48%), Gaps = 14/285 (4%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T ++ Y GDI R +FDK FLW++++SGYA+ G E++ +F+ M + ++
Sbjct: 138 TKLVFMYVNCGDIREGRVIFDKIANEKVFLWNLMLSGYAKIGAFEESVYLFRKMLDLGIQ 197
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
+ + + ++ + +G++ +WV YL + T VV +LI K ++ A +
Sbjct: 198 VNSHTVSCILKCFAALGSVKEGEWVHGYLLKLGFGSYNT-VVNSLISFYFKTRKIEAAYE 256
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
+F+E+ RD+ S+ SMI G + E+ + +F +ML G+ D +L AC++
Sbjct: 257 VFDELKNRDIVSWNSMISGTVANDLPEKGIQVFKEMLYLGVSFDLVTLVNVLAACANSGN 316
Query: 230 VEEGK--HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGA 287
G+ H F K + ++D+ S+ G L A + + M E +W +
Sbjct: 317 FPLGRVLHAFAI---KAQLDQRMTFVNTLLDMYSKCGDLNNAIRVFQKMG-ERSVVSWTS 372
Query: 288 LLGACKFYGEVELGEIVANRLF-ELEPENSSP--YVLLSSIYAAA 329
L+ + E GE + RLF E+E E P + + + ++A A
Sbjct: 373 LIAG--YAREGLSGEGI--RLFHEMEREGVRPDNFTVTAVLHACA 413
>30190.m011319 pentatricopeptide repeat-containing protein, putative
Length = 678
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 145/286 (50%), Gaps = 43/286 (15%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE--------------RDVV 47
+A+ +F MPER+L WNA + G + G+ + A +F M + + V
Sbjct: 393 DARLLFNLMPERDLIVWNAAITGHSQNGEDLEAVSLFPSMHKEGVGFNQITLSTVLKSVA 452
Query: 48 SFTV-------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
S V +ID Y K G I A +F ++P D ++
Sbjct: 453 SLQVDHICSQIHALSLKSGFQFDNYVANSLIDTYGKCGRIKDATRIFQESPFVDLVAFTS 512
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+I+ Y+Q+G EALK++ M+ ++PD ++ SL++AC+ + + K V ++ +
Sbjct: 513 MITAYSQDGQGEEALKLYLEMQDRKIRPDSFVCSSLLNACANLSAYEQGKQVHVHVLKFG 572
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
I +L++M AKCG++D A++ F E+P+R + S+ +MI G + HG+ ++A+ LF
Sbjct: 573 F-ISDIFAGNSLVNMYAKCGSIDDADRAFSEIPERGIVSWSAMIGGFAQHGHGKEALQLF 631
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVP 248
N+ML +G+ P++ + +AC+ L+ H +T +S + +P
Sbjct: 632 NRMLEDGIPPNHMYVYDVPSACNPAILI---AHLEKTQESSSAGMP 674
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 159/358 (44%), Gaps = 60/358 (16%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGG----------------LVKGGDLIN----------- 33
+ A RVF ++ + ++ SWNA++ G + + G N
Sbjct: 291 EEAIRVFEEIAKPDIVSWNAIIAGCALREYHCWALELFGKMNRSGMCPNMFTISSALKAC 350
Query: 34 --------ARKVFDDMPERDVVSFTVM----IDGYAKVGDIASARALFDKAPKRDAFLWS 81
R++ + + D+ S + + ID Y+K + AR LF+ P+RD +W+
Sbjct: 351 AGMGLKELGRQLHSSLLKMDIRSDSFLAVGLIDMYSKCDLMTDARLLFNLMPERDLIVWN 410
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSA---------CSQVGNLDLAK 132
I+G++QNG EA+ +F M V ++ + +++ + CSQ+ L L
Sbjct: 411 AAITGHSQNGEDLEAVSLFPSMHKEGVGFNQITLSTVLKSVASLQVDHICSQIHALSLK- 469
Query: 133 WVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIH 192
S D +V +LID KCG + A ++F+E P DL ++ SMI S
Sbjct: 470 ------SGFQFD---NYVANSLIDTYGKCGRIKDATRIFQESPFVDLVAFTSMITAYSQD 520
Query: 193 GYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEH 252
G E+A+ L+ +M + + PD+ + +L AC++ E+GK K+ +
Sbjct: 521 GQGEEALKLYLEMQDRKIRPDSFVCSSLLNACANLSAYEQGKQ-VHVHVLKFGFISDIFA 579
Query: 253 YACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE 310
+V++ ++ G + +A +P E +W A++G +G + + NR+ E
Sbjct: 580 GNSLVNMYAKCGSIDDADRAFSEIP-ERGIVSWSAMIGGFAQHGHGKEALQLFNRMLE 636
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 35/279 (12%)
Query: 51 VMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKP 110
++I+ Y+K AR + D++ + D WS LISGY+QNG EA+ F M L+ VK
Sbjct: 146 LLINLYSKCQFFKYARKMVDESTEPDLVSWSALISGYSQNGFGKEAISAFYEMHLLGVKC 205
Query: 111 DEYIMVSLMSACSQVGNLDLAKW--------------------------------VDCYL 138
+E+ SL+ AC+ ++ L + + YL
Sbjct: 206 NEFTFPSLLKACTSTTDMWLGRQDMILSGIRPNEFSLSCMINACTGLEDSSQGRKIHGYL 265
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+ + D+ AL+DM AK G ++ A ++FEE+ K D+ S+ ++I G ++ Y A
Sbjct: 266 IKLAYDL-DLFSANALVDMYAKVGTLEEAIRVFEEIAKPDIVSWNAIIAGCALREYHCWA 324
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+ LF KM G+ P+ + L AC+ L E G+ ++ K + ++D
Sbjct: 325 LELFGKMNRSGMCPNMFTISSALKACAGMGLKELGRQLHSSLL-KMDIRSDSFLAVGLID 383
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
+ S+ + +A L MP E W A + GE
Sbjct: 384 MYSKCDLMTDARLLFNLMP-ERDLIVWNAAITGHSQNGE 421
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 117/237 (49%), Gaps = 10/237 (4%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D+ S ++D YAKVG + A +F++ K D W+ +I+G A AL++F M
Sbjct: 273 DLFSANALVDMYAKVGTLEEAIRVFEEIAKPDIVSWNAIIAGCALREYHCWALELFGKMN 332
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
+ P+ + + S + AC+ +G +L + + L + I + + LIDM +KC M
Sbjct: 333 RSGMCPNMFTISSALKACAGMGLKELGRQLHSSLLKMDIR-SDSFLAVGLIDMYSKCDLM 391
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
A LF MP+RDL + + I G S +G +AV LF M EG+ + + +L +
Sbjct: 392 TDARLLFNLMPERDLIVWNAAITGHSQNGEDLEAVSLFPSMHKEGVGFNQITLSTVLKSV 451
Query: 225 SHGRL--VEEGKHYFETMKSKYSMVPSPEHYAC--MVDLLSRSGQLKEAYELLKSMP 277
+ ++ + H ++KS + ++Y ++D + G++K+A + + P
Sbjct: 452 ASLQVDHICSQIHAL-SLKSGFQF----DNYVANSLIDTYGKCGRIKDATRIFQESP 503
>29761.m000418 pentatricopeptide repeat-containing protein, putative
Length = 438
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 103/154 (66%), Gaps = 1/154 (0%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
++ Y K +I A+ +FD+ +R+ WS +ISGYA+ G+ NEAL +F+ M+ + ++PD
Sbjct: 273 LVSLYGKCEEIRLAKQVFDEITERNLVCWSAMISGYARVGMVNEALSMFREMQEVGIEPD 332
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
E +V ++SAC+ G LD+ +W+ Y+ + I I + AL++M AKCG +++A ++F
Sbjct: 333 EVSLVGVISACAMAGALDIGRWIHAYIKKRMIHI-DLELNTALVNMYAKCGCIEKAKEIF 391
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM 205
+ MP +D ++ SMI GL+IHG AE A+ +F++M
Sbjct: 392 DYMPVKDSKAWSSMIVGLAIHGLAEDALEMFSRM 425
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 130/257 (50%), Gaps = 11/257 (4%)
Query: 46 VVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG--YAQNGLPNEALKIFQGM 103
++SF+ + + +GD+ AR +F + P F ++ +I G YA+N E +++ M
Sbjct: 168 ILSFSAL----SPLGDLNYARKIFAQIPNPGIFPYNTIIRGCSYAKNP-SREPYFLYKSM 222
Query: 104 ELMNV-KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
+ + + M ++ AC+ + + + + + +S + +V ++L+ + KC
Sbjct: 223 VTRGFPRANTFTMAFVLKACASIMAFEEGRQIHARILRSGFSLN-PYVQSSLVSLYGKCE 281
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
+ A ++F+E+ +R+L + +MI G + G +A+ +F +M G+ PD + +++
Sbjct: 282 EIRLAKQVFDEITERNLVCWSAMISGYARVGMVNEALSMFREMQEVGIEPDEVSLVGVIS 341
Query: 223 ACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHA 282
AC+ ++ G+ +K + + E +V++ ++ G +++A E+ MPV+ +
Sbjct: 342 ACAMAGALDIGRWIHAYIKKRMIHI-DLELNTALVNMYAKCGCIEKAKEIFDYMPVKD-S 399
Query: 283 SAWGALLGACKFYGEVE 299
AW +++ +G E
Sbjct: 400 KAWSSMIVGLAIHGLAE 416
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 39/141 (27%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSF--------- 49
AK+VF ++ ERNL W+AM+ G + G + A +F +M E D VS
Sbjct: 286 AKQVFDEITERNLVCWSAMISGYARVGMVNEALSMFREMQEVGIEPDEVSLVGVISACAM 345
Query: 50 --------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
T +++ YAK G I A+ +FD P +D+ WS +
Sbjct: 346 AGALDIGRWIHAYIKKRMIHIDLELNTALVNMYAKCGCIEKAKEIFDYMPVKDSKAWSSM 405
Query: 84 ISGYAQNGLPNEALKIFQGME 104
I G A +GL +AL++F ME
Sbjct: 406 IVGLAIHGLAEDALEMFSRME 426
>29904.m003059 pentatricopeptide repeat-containing protein, putative
Length = 506
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 143/302 (47%), Gaps = 51/302 (16%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSF------------- 49
A ++F +MPER++ SWN ++ G GD +++ D + + + F
Sbjct: 182 ALKLFDEMPERSVGSWNVVIAGYSDSGDRNLNQQIVDLVKDMQIDGFKPNAFTVSSLLVL 241
Query: 50 -----------------------------------TVMIDGYAKVGDIASARALFDKAPK 74
+ +ID Y+++ + LFD+ +
Sbjct: 242 CDGDIEKLDYGRELHGFIVRNELDLGCLGSDVHLGSCLIDMYSRINRVEKCMQLFDQMKR 301
Query: 75 RDAFLWSVLISGYAQNGLPNEALKIFQGMELMN-VKPDEYIMVSLMSACSQVGNLDLAKW 133
R+ ++W+ +I+GY QNG EAL +F M+ + V+P+ +VS++ CS + L K
Sbjct: 302 RNVYVWTAMINGYVQNGALEEALTLFHEMQAKDGVEPNRVTLVSVLPICSSLAGLPGGKQ 361
Query: 134 VDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIH 192
+ Y + ++ + + ALIDM +KCG+++ A ++F+ +RD S+ S+I G +H
Sbjct: 362 IHGYAIRKRLNFDAS-LSNALIDMYSKCGSLNYARRVFDNGTFRRDAISWSSIISGYGLH 420
Query: 193 GYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEH 252
G E+AV L++KML G PD +++AC LV EG + + Y ++ +
Sbjct: 421 GKGEEAVFLYDKMLQLGNKPDQITVIGVISACGRSGLVYEGLRIYNSAIKCYQLLKTDNR 480
Query: 253 YA 254
+A
Sbjct: 481 WA 482
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 143/277 (51%), Gaps = 12/277 (4%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNG---LPNEALKIFQ 101
D V ++ Y K G+ + A LFD+ P+R W+V+I+GY+ +G L + + + +
Sbjct: 162 DTVVANSLMSMYCKCGEFSEALKLFDEMPERSVGSWNVVIAGYSDSGDRNLNQQIVDLVK 221
Query: 102 GMELMNVKPDEYIMVSLMSAC-SQVGNLDLAKWVDCYLSQSSIDIG----QTHVVAALID 156
M++ KP+ + + SL+ C + LD + + ++ ++ +D+G H+ + LID
Sbjct: 222 DMQIDGFKPNAFTVSSLLVLCDGDIEKLDYGRELHGFIVRNELDLGCLGSDVHLGSCLID 281
Query: 157 MNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM-LNEGLIPDNA 215
M ++ +++ +LF++M +R+++ + +MI G +G E+A+ LF++M +G+ P+
Sbjct: 282 MYSRINRVEKCMQLFDQMKRRNVYVWTAMINGYVQNGALEEALTLFHEMQAKDGVEPNRV 341
Query: 216 AFTVILTACSHGRLVEEGKH-YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLK 274
+L CS + GK + ++ + + S + ++D+ S+ G L A +
Sbjct: 342 TLVSVLPICSSLAGLPGGKQIHGYAIRKRLNFDASLSN--ALIDMYSKCGSLNYARRVFD 399
Query: 275 SMPVESHASAWGALLGACKFYGEVELGEIVANRLFEL 311
+ A +W +++ +G+ E + +++ +L
Sbjct: 400 NGTFRRDAISWSSIISGYGLHGKGEEAVFLYDKMLQL 436
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 120/264 (45%), Gaps = 22/264 (8%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T +I YA G +++ +F+ + LW+ LISGY +N E+ +F M V
Sbjct: 66 TKLISAYAICGVPTASKLVFNSLEVKSVPLWNSLISGYVKNQENTESFSLFCQMCSFGVL 125
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG---QTHVVAALIDMNAKCGNMDR 166
PD+Y + +L C ++G+L K + S+ IG T V +L+ M KCG
Sbjct: 126 PDDYTLATLSKVCGEIGHLIAGKIIHGL----SLKIGFVLDTVVANSLMSMYCKCGEFSE 181
Query: 167 ANKLFEEMPKRDLFSYCSMIQGLSIHG---YAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
A KLF+EMP+R + S+ +I G S G +Q V L M +G P+ + +L
Sbjct: 182 ALKLFDEMPERSVGSWNVVIAGYSDSGDRNLNQQIVDLVKDMQIDGFKPNAFTVSSLLVL 241
Query: 224 C-------SHGRLVEEGKHYFETMKSKYSMVPSPEHY-ACMVDLLSRSGQLKEAYELLKS 275
C +GR E + + + S H +C++D+ SR ++++ +L
Sbjct: 242 CDGDIEKLDYGR---ELHGFIVRNELDLGCLGSDVHLGSCLIDMYSRINRVEKCMQLFDQ 298
Query: 276 MPVESHASAWGALLGACKFYGEVE 299
M + W A++ G +E
Sbjct: 299 MK-RRNVYVWTAMINGYVQNGALE 321
>29813.m001452 pentatricopeptide repeat-containing protein, putative
Length = 476
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 112/191 (58%), Gaps = 1/191 (0%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T +I+ YAK G I S R +FD ++D LW+ +I YA+ GL +A+ + Q M+L V+
Sbjct: 268 TALIEMYAKTGRIDSGRRIFDGIVEKDVILWNCMIDKYAKVGLLEQAIALLQLMKLEGVR 327
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
+ + L++AC+ G++ L + Y+ +++ + AL+DM KCG +D+A +
Sbjct: 328 ANSSSLAGLLAACAASGSIKLGWRLSDYVEAEELEVDAV-LGTALVDMFGKCGFLDKAIQ 386
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
+FE M +D+ S+ +MI G +HG A AV LF +M EG IP+ F +L+ACSHG L
Sbjct: 387 VFERMESKDVKSWTAMILGYGVHGQARNAVALFYRMEKEGFIPNEVTFLGVLSACSHGGL 446
Query: 230 VEEGKHYFETM 240
V E FE M
Sbjct: 447 VVEAMKCFERM 457
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 116/246 (47%), Gaps = 10/246 (4%)
Query: 56 YAKVGDIASARALFDKAPK-RDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYI 114
Y+ G I A+ LFD+ + D W+ L+ Y P ++++ M
Sbjct: 172 YSVCGLIGDAQKLFDEFSQLNDLVSWNALMGAYLHVSQPAMTIEVYGQMFRYGFIMSVAT 231
Query: 115 MVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG---QTHVVAALIDMNAKCGNMDRANKLF 171
+S++SA + +G+ + + I IG +VV ALI+M AK G +D ++F
Sbjct: 232 SLSVLSAFADLGDPTGGETIHA----CCIKIGFCSNLNVVTALIEMYAKTGRIDSGRRIF 287
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
+ + ++D+ + MI + G EQA+ L M EG+ ++++ +L AC+ ++
Sbjct: 288 DGIVEKDVILWNCMIDKYAKVGLLEQAIALLQLMKLEGVRANSSSLAGLLAACAASGSIK 347
Query: 232 EGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
G + ++++ V + A +VD+ + G L +A ++ + M + +W A++
Sbjct: 348 LGWRLSDYVEAEELEVDAVLGTA-LVDMFGKCGFLDKAIQVFERMESKD-VKSWTAMILG 405
Query: 292 CKFYGE 297
+G+
Sbjct: 406 YGVHGQ 411
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 64/165 (38%), Gaps = 39/165 (23%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP------------------ 42
D+ +R+F + E+++ WN M+ K G L A + M
Sbjct: 281 DSGRRIFDGIVEKDVILWNCMIDKYAKVGLLEQAIALLQLMKLEGVRANSSSLAGLLAAC 340
Query: 43 ---------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
E D V T ++D + K G + A +F++ +D W+
Sbjct: 341 AASGSIKLGWRLSDYVEAEELEVDAVLGTALVDMFGKCGFLDKAIQVFERMESKDVKSWT 400
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVG 126
+I GY +G A+ +F ME P+E + ++SACS G
Sbjct: 401 AMILGYGVHGQARNAVALFYRMEKEGFIPNEVTFLGVLSACSHGG 445
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 117/261 (44%), Gaps = 46/261 (17%)
Query: 57 AKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMV 116
+ + D+ A ++F+ + F+++ L+ G++ P +A +F+ + ++ D++ +
Sbjct: 72 SSIQDLKYAASIFNHTQNPNLFMYNTLLRGFSIGDNPKQAFAVFKNLRAQRIELDQFSFI 131
Query: 117 SLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK 176
+++ A ++ + + + +++S + +V L+ + + CG + A KLF+E +
Sbjct: 132 TILKASARELAVKAGQGIHGIVARSGY-LMFVNVKNTLLHLYSVCGLIGDAQKLFDEFSQ 190
Query: 177 -RDLFSYCSMIQGLSIH-GYAEQAVGLFNKMLNEGLIPDNAAFTVILTA----------- 223
DL S+ +++ G +H + ++ +M G I A +L+A
Sbjct: 191 LNDLVSWNALM-GAYLHVSQPAMTIEVYGQMFRYGFIMSVATSLSVLSAFADLGDPTGGE 249
Query: 224 -----------CSH--------------GRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
CS+ GR ++ G+ F+ + K ++ + CM+D
Sbjct: 250 TIHACCIKIGFCSNLNVVTALIEMYAKTGR-IDSGRRIFDGIVEKDVIL-----WNCMID 303
Query: 259 LLSRSGQLKEAYELLKSMPVE 279
++ G L++A LL+ M +E
Sbjct: 304 KYAKVGLLEQAIALLQLMKLE 324
>27810.m000670 pentatricopeptide repeat-containing protein, putative
Length = 818
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 136/281 (48%), Gaps = 45/281 (16%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV--SFTV-------- 51
+A+ VF +M ERN+ SW AM+ G + G +F M D+ FT+
Sbjct: 528 DARHVFDEMSERNVVSWTAMISGYSRRGFAFETLHLFVRMLRSDIEPNEFTLATVLTSCT 587
Query: 52 -----------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
++D YAK G I AR +F+ P+RD +
Sbjct: 588 DASGSELGRQIHSLIIKCNYDSHIFVGSSLLDMYAKAGRILEARMVFESLPERDVVSCTA 647
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+ISGYAQ GL EAL++F+ +E + + S++++ S + LD K V ++ +
Sbjct: 648 IISGYAQLGLDEEALELFRRLEREGLSSNCVTYASVLTSLSGLAALDHGKQVHSHVLRRE 707
Query: 143 IDIGQTHVV--AALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
+ +VV ++IDM +KCG+++ A ++F+ MP+R + S+ +M+ G HG + V
Sbjct: 708 LPF---YVVLQNSMIDMYSKCGSLNYARRIFDSMPERTVISWNAMLVGYGKHGMGREVVE 764
Query: 201 LFNKMLNEGLI-PDNAAFTVILTACSHGRLVEEGKHYFETM 240
LF M E + PD+ +L+ CSHG ++G F+ M
Sbjct: 765 LFKLMRTENKVKPDSVTILAVLSGCSHGGFEDKGLEIFDEM 805
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 136/270 (50%), Gaps = 14/270 (5%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T +I Y K + AR +FD+ +R+ W+ +ISGY++ G E L +F M +++
Sbjct: 514 TRLIVFYTKCDLLMDARHVFDEMSERNVVSWTAMISGYSRRGFAFETLHLFVRMLRSDIE 573
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
P+E+ + +++++C+ +L + + + + + D V ++L+DM AK G + A
Sbjct: 574 PNEFTLATVLTSCTDASGSELGRQIHSLIIKCNYD-SHIFVGSSLLDMYAKAGRILEARM 632
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
+FE +P+RD+ S ++I G + G E+A+ LF ++ EGL + + +LT+ S
Sbjct: 633 VFESLPERDVVSCTAIISGYAQLGLDEEALELFRRLEREGLSSNCVTYASVLTSLSGLAA 692
Query: 230 VEEGK----HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAW 285
++ GK H Y ++ + M+D+ S+ G L A + SMP E +W
Sbjct: 693 LDHGKQVHSHVLRRELPFYVVLQNS-----MIDMYSKCGSLNYARRIFDSMP-ERTVISW 746
Query: 286 GALLGACKFYGEVELGEIVANRLFELEPEN 315
A+L YG+ +G V + EN
Sbjct: 747 NAMLVG---YGKHGMGREVVELFKLMRTEN 773
>27538.m000322 pentatricopeptide repeat-containing protein, putative
Length = 548
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 123/222 (55%), Gaps = 12/222 (5%)
Query: 98 KIFQGMELMNVKPDEYIMV------SLMSACSQVGNLDLAKWVDCYLS--QSSIDIGQTH 149
K+ + +E++N+ + ++V LM C + + AK V +L QS + +
Sbjct: 213 KVKEAVEVLNLLEERRVLVDLPRFLQLMRICGEAKASEEAKVVHDHLVRLQSPLAVS--- 269
Query: 150 VVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEG 209
+++M KCG+MD A +F +MPKR+L ++ +MI L+ +G E A+ LF++ G
Sbjct: 270 TFNKILEMYGKCGDMDSAFAVFNKMPKRNLTTWDTMIAWLAKNGLGEDAIDLFSQFKQAG 329
Query: 210 LIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEA 269
L+PD F + +AC V EG +FE+MK Y +VPS EH+ +VD+L G L EA
Sbjct: 330 LVPDAQLFIGVFSACGVVGDVIEGMLHFESMKKDYGIVPSMEHFVSIVDMLGTIGHLDEA 389
Query: 270 YELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFEL 311
E ++ MP+E W +L+ + +G +ELG+ A +L EL
Sbjct: 390 LEFIEKMPMEPSIDVWESLMNLSRIHGNLELGDRCA-KLVEL 430
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 13/158 (8%)
Query: 46 VVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMEL 105
V +F +++ Y K GD+ SA A+F+K PKR+ W +I+ A+NGL +A+ +F +
Sbjct: 268 VSTFNKILEMYGKCGDMDSAFAVFNKMPKRNLTTWDTMIAWLAKNGLGEDAIDLFSQFKQ 327
Query: 106 MNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI--DIG----QTHVVAALIDMNA 159
+ PD + + + SAC VG++ ++ L S+ D G H V +++DM
Sbjct: 328 AGLVPDAQLFIGVFSACGVVGDV-----IEGMLHFESMKKDYGIVPSMEHFV-SIVDMLG 381
Query: 160 KCGNMDRANKLFEEMPKRDLFSYCSMIQGLS-IHGYAE 196
G++D A + E+MP + LS IHG E
Sbjct: 382 TIGHLDEALEFIEKMPMEPSIDVWESLMNLSRIHGNLE 419
>29953.m000441 pentatricopeptide repeat-containing protein, putative
Length = 542
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 119/213 (55%), Gaps = 5/213 (2%)
Query: 36 KVFDDMPERDVVSFTVMIDGYAKVGDIASARALF----DKAPKRDAFLWSVLISGYAQNG 91
+VFD+M DV + ++ G ++ G + A +F D+ + + W+ +I+ +QNG
Sbjct: 295 EVFDEMYHMDVGACNALVTGLSRNGLVDKALQVFRRFKDQGMELNVVSWTSIIASCSQNG 354
Query: 92 LPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVV 151
EAL++F+ M+++ VKP+ + L+ AC + L K C+ +S I +V
Sbjct: 355 KDIEALELFREMQVVGVKPNAVTIPCLLPACGNIAALMHGKAAHCFSLKSGIS-SNVYVG 413
Query: 152 AALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLI 211
+AL+DM AKCG + + F+ MP R+L S+ +++ G ++HG ++A+ +F +M G
Sbjct: 414 SALVDMYAKCGRIHISRLCFDIMPTRNLVSWNALMAGYAMHGQTKEAISIFQRMQRSGQK 473
Query: 212 PDNAAFTVILTACSHGRLVEEGKHYFETMKSKY 244
PD +F +L+ACS G EG YF +M + Y
Sbjct: 474 PDFVSFISVLSACSQGGKTNEGWSYFNSMSNDY 506
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 121/227 (53%), Gaps = 5/227 (2%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK----APK 74
+++V +K L +A KVFD + + DVV+++ ++ GYA+ G I LF K +
Sbjct: 142 SSLVHMYIKCNRLKDAHKVFDKLSQPDVVAYSALLAGYARRGCIGETMELFSKRGDLGVE 201
Query: 75 RDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV 134
+ W+ +I+G+ + +A+ IFQ M KPD + S++SA + LD+ +
Sbjct: 202 LNLISWNGMIAGFNHSRHHLDAVIIFQNMHCEEFKPDGTSISSVLSAVGDLKMLDMGFQI 261
Query: 135 DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGY 194
Y+ + + + VV+ALIDM KC + +++F+EM D+ + +++ GLS +G
Sbjct: 262 HGYVIKQGLCQDKC-VVSALIDMYGKCACTMKISEVFDEMYHMDVGACNALVTGLSRNGL 320
Query: 195 AEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
++A+ +F + ++G+ + ++T I+ +CS E F M+
Sbjct: 321 VDKALQVFRRFKDQGMELNVVSWTSIIASCSQNGKDIEALELFREMQ 367
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
D +++ S++ AC+ + L AK V C S S + V+++L+ M KC + A+K+
Sbjct: 102 DRHVLPSVIKACAGLSFLKTAKQVHCMASVSGFG-SDSRVLSSLVHMYIKCNRLKDAHKV 160
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLV 230
F+++ + D+ +Y +++ G + G + + LF+K + G+ + ++ ++ +H R
Sbjct: 161 FDKLSQPDVVAYSALLAGYARRGCIGETMELFSKRGDLGVELNLISWNGMIAGFNHSRHH 220
Query: 231 EEGKHYFETM 240
+ F+ M
Sbjct: 221 LDAVIIFQNM 230
>30169.m006528 pentatricopeptide repeat-containing protein, putative
Length = 567
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 126/238 (52%), Gaps = 2/238 (0%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGD 61
+A +F + E+N N MV G + +++ +F+ MP++ ++S MI Y++ G+
Sbjct: 319 DADLIFNRATEKNSALCNLMVKAYSMSGRVEDSKTLFEKMPQKTIISSNTMISVYSRNGE 378
Query: 62 IASARALFDKAP-KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
+ A LF++ +R+ W+ ++SGY QN EALK++ M+ +V L
Sbjct: 379 LDKALMLFEQTKDQRNPVTWNSMLSGYVQNEQHEEALKLYVTMKRSSVDCTRSTFSVLFR 438
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
ACS +G+L K + L ++ +V +L+DM +KCG++ A K F + ++
Sbjct: 439 ACSYIGSLQQGKMLHANLIKTPF-ASNVYVGTSLVDMYSKCGSIFDAKKSFSSISAPNVA 497
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE 238
++ ++I G + HG+ +A+ LF ML + ++P+ A F ILTAC L E + +
Sbjct: 498 AWTALINGYAHHGFGSEAILLFQHMLEQKVVPNGATFVGILTACDRAGLTAEAVPFIQ 555
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 141/290 (48%), Gaps = 41/290 (14%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
D+AKRVF ++ ++N W++MV V+ G L +A +F MP+++VVS++ +I GYAK
Sbjct: 153 DDAKRVFDELHDKNEVVWSSMVVCYVQRGLLTDAYDLFVKMPKKEVVSWSKLISGYAK-- 210
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM-ELMNVKPDEYIMVSLM 119
+ R+ +AL++FQ M E V P+E+ + S++
Sbjct: 211 --SEVRS--------------------------EKALELFQLMRESGEVLPNEFTLDSVI 242
Query: 120 SACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDL 179
C ++G L V L ++ + Q+ + AL+ C +D A ++++ +
Sbjct: 243 RVCGKLGALSEGMVVHGILIKTGFEFDQS-ISGALVQFYCDCEAIDDAKRIYDGIAYPCS 301
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFET 239
+ S+I+G + G + A +FN+ + ++A +++ A S VE+ K FE
Sbjct: 302 SASNSLIEGYVLLGRIKDADLIFNRATEK----NSALCNLMVKAYSMSGRVEDSKTLFEK 357
Query: 240 MKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
M K +++ S M+ + SR+G+L +A L + + + W ++L
Sbjct: 358 MPQK-TIISSNT----MISVYSRNGELDKALMLFEQTKDQRNPVTWNSML 402
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 118/259 (45%), Gaps = 14/259 (5%)
Query: 46 VVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMEL 105
VS + I YA G + AR LFDK P+R + W+ +IS Y + G E+ + M
Sbjct: 35 TVSTNIAITRYAIKGQLDFARCLFDKMPQRTSVSWNTMISSYLKWGKFKESFSLLSLMHR 94
Query: 106 MNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAA-LIDMNAKCGNM 164
N + DE +++S C++ + K + C + +S G +V + L+ C +
Sbjct: 95 SNTQLDETTFSTILSVCTRTQSFCDGKQIHCLVLKSG--CGSFELVGSVLLYFYGNCSQI 152
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
D A ++F+E+ ++ + SM+ G A LF KM + ++ +++ +++
Sbjct: 153 DDAKRVFDELHDKNEVVWSSMVVCYVQRGLLTDAYDLFVKMPKKEVV----SWSKLISGY 208
Query: 225 SHGRL-VEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEA---YELLKSMPVES 280
+ + E+ F+ M+ ++P+ ++ + + G L E + +L E
Sbjct: 209 AKSEVRSEKALELFQLMRESGEVLPNEFTLDSVIRVCGKLGALSEGMVVHGILIKTGFEF 268
Query: 281 HASAWGALLGACKFYGEVE 299
S GAL+ +FY + E
Sbjct: 269 DQSISGALV---QFYCDCE 284
>30174.m009151 pentatricopeptide repeat-containing protein, putative
Length = 456
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 133/277 (48%), Gaps = 38/277 (13%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDD------MP-ERDVVS------ 48
+A+ VF ++ +L SW AM+ G + +A K+F D +P + +VS
Sbjct: 157 DARSVFDELSSIDLVSWTAMIVGYTQSNLSYDALKLFLDKKWAGILPNDVTIVSALAACA 216
Query: 49 -------------------------FTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
++ YAK A LF+ A ++D W+ +
Sbjct: 217 RMGNLNLGRSIHGLAIKLGFAEPTLMNALVHMYAKCHMNRDASYLFETASEKDVVSWNSI 276
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
ISG +Q G P EAL +FQ M +V PD +VS+ SAC+ +G L + + Y + +
Sbjct: 277 ISGCSQMGSPYEALDLFQRMRKESVSPDAVTLVSVFSACASLGALQVGSSLHAYSVKEGL 336
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+V AL+ AKCG+ A +F+ M +++ ++ +MI G + G A ++ +FN
Sbjct: 337 LSSNVYVSTALLTFYAKCGDAGSARTIFDGMQEKNTVTWSAMIGGYGVQGDAGGSLSIFN 396
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
ML + L P+ FT IL+ACSH +V EG + F +M
Sbjct: 397 DMLRQELKPNEVIFTTILSACSHTGMVGEGWNLFISM 433
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 160/344 (46%), Gaps = 32/344 (9%)
Query: 11 PERNLTSWNAMVGGLVKG-----GDLINA---------RKVFDDMPERDVVSF-----TV 51
P L +N M GL++G G L+ A K F + V T
Sbjct: 85 PVEGLILFNRMREGLIEGNQFTLGILVTACTKLGALHQGKCFHGYAIKSGVQLNSYLMTA 144
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
++D Y K G I AR++FD+ D W+ +I GY Q+ L +ALK+F + + P+
Sbjct: 145 LLDMYVKCGVIRDARSVFDELSSIDLVSWTAMIVGYTQSNLSYDALKLFLDKKWAGILPN 204
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDR-ANKL 170
+ +VS ++AC+++GNL+L + + + + + ++ AL+ M AKC +M+R A+ L
Sbjct: 205 DVTIVSALAACARMGNLNLGRSIHGLAIK--LGFAEPTLMNALVHMYAKC-HMNRDASYL 261
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLV 230
FE ++D+ S+ S+I G S G +A+ LF +M E + PD + +AC+ +
Sbjct: 262 FETASEKDVVSWNSIISGCSQMGSPYEALDLFQRMRKESVSPDAVTLVSVFSACASLGAL 321
Query: 231 EEGKHYFETMKSKYSMVPSPEHYA-CMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
+ G K ++ S + + ++ ++ G A + M E + W A++
Sbjct: 322 QVGSS-LHAYSVKEGLLSSNVYVSTALLTFYAKCGDAGSARTIFDGMQ-EKNTVTWSAMI 379
Query: 290 GACKFYGEVELGEIVANRLF--ELEPENSSPYVLLSSIYAAADQ 331
G G+ + N + EL+P V+ ++I +A
Sbjct: 380 GGYGVQGDAGGSLSIFNDMLRQELKPNE----VIFTTILSACSH 419
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 137/286 (47%), Gaps = 10/286 (3%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D T + D YAK G+I +R FD+ R+ W+ +I GY QN P E L +F M
Sbjct: 37 DSFVLTGLTDFYAKCGEIECSRCAFDENLDRNVVSWTSMIVGYVQNDCPVEGLILFNRMR 96
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
++ +++ + L++AC+++G L K Y +S + + ++++ AL+DM KCG +
Sbjct: 97 EGLIEGNQFTLGILVTACTKLGALHQGKCFHGYAIKSGVQL-NSYLMTALLDMYVKCGVI 155
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
A +F+E+ DL S+ +MI G + + A+ LF G++P++ L AC
Sbjct: 156 RDARSVFDELSSIDLVSWTAMIVGYTQSNLSYDALKLFLDKKWAGILPNDVTIVSALAAC 215
Query: 225 SHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASA 284
+ + G+ + K P +V + ++ ++A L ++ E +
Sbjct: 216 ARMGNLNLGRS-IHGLAIKLGF-AEPTLMNALVHMYAKCHMNRDASYLFETAS-EKDVVS 272
Query: 285 WGALLGACKFYGEVELGEIVANRLFE-LEPENSSP-YVLLSSIYAA 328
W +++ C G A LF+ + E+ SP V L S+++A
Sbjct: 273 WNSIISGCSQMGS----PYEALDLFQRMRKESVSPDAVTLVSVFSA 314
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFD--- 70
N+ A++ K GD +AR +FD M E++ V+++ MI GY GD + ++F+
Sbjct: 340 NVYVSTALLTFYAKCGDAGSARTIFDGMQEKNTVTWSAMIGGYGVQGDAGGSLSIFNDML 399
Query: 71 -KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+ K + +++ ++S + G+ E +F M M PD
Sbjct: 400 RQELKPNEVIFTTILSACSHTGMVGEGWNLFISMCQMRADPD 441
>29912.m005452 pentatricopeptide repeat-containing protein, putative
Length = 352
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 108/178 (60%), Gaps = 3/178 (1%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
I Y+K GDI +A +F++ P+R W+ +I G +Q G EA++IF M PD
Sbjct: 164 FISFYSKSGDIKNAYKMFEENPERKLGSWNAIIGGLSQGGHAKEAIEIFIEMRKCGFVPD 223
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA--ALIDMNAKCGNMDRANK 169
+ MVS++SAC +G+L+LA + Y+ +++ G+T+++ +LIDM KCG MD A +
Sbjct: 224 DVTMVSVISACGSLGDLNLAIQLHKYVFHANV-FGRTNILVMNSLIDMYGKCGRMDLARR 282
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHG 227
+F M ++++ S+ SMI G +HG+ +A+ F+ M G+ P++ F +L+ C HG
Sbjct: 283 VFCTMGEKNVSSWTSMIVGYGMHGHVNEAIEYFHCMREAGVRPNHVTFIGVLSVCVHG 340
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 126/253 (49%), Gaps = 27/253 (10%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
YA + I S F AP F W+ +I Y + P +AL+++ M V PD Y +
Sbjct: 73 YAHI--ICSDLLHFYSAP----FHWNNIIRSYTRLDAPVKALQVYISMSRAGVLPDSYTL 126
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIG---QTHVVAALIDMNAKCGNMDRANKLFE 172
++ A Q+ ++++ K L +I +G + + I +K G++ A K+FE
Sbjct: 127 PIVLKAACQIFSIEIGKQ----LQSVAIRLGLESNEYCESGFISFYSKSGDIKNAYKMFE 182
Query: 173 EMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC-SHGRL-- 229
E P+R L S+ ++I GLS G+A++A+ +F +M G +PD+ +++AC S G L
Sbjct: 183 ENPERKLGSWNAIIGGLSQGGHAKEAIEIFIEMRKCGFVPDDVTMVSVISACGSLGDLNL 242
Query: 230 -VEEGKHYFETM---KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAW 285
++ K+ F ++ ++ S ++D+ + G++ A + +M E + S+W
Sbjct: 243 AIQLHKYVFHANVFGRTNILVMNS------LIDMYGKCGRMDLARRVFCTMG-EKNVSSW 295
Query: 286 GALLGACKFYGEV 298
+++ +G V
Sbjct: 296 TSMIVGYGMHGHV 308
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 41/166 (24%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVF----------DDMPERDVVS--- 48
NA ++F + PER L SWNA++GGL +GG A ++F DD+ V+S
Sbjct: 176 NAYKMFEENPERKLGSWNAIIGGLSQGGHAKEAIEIFIEMRKCGFVPDDVTMVSVISACG 235
Query: 49 ----------------------------FTVMIDGYAKVGDIASARALFDKAPKRDAFLW 80
+ID Y K G + AR +F +++ W
Sbjct: 236 SLGDLNLAIQLHKYVFHANVFGRTNILVMNSLIDMYGKCGRMDLARRVFCTMGEKNVSSW 295
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVG 126
+ +I GY +G NEA++ F M V+P+ + ++S C G
Sbjct: 296 TSMIVGYGMHGHVNEAIEYFHCMREAGVRPNHVTFIGVLSVCVHGG 341
>29801.m003193 pentatricopeptide repeat-containing protein, putative
Length = 573
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 116/218 (53%), Gaps = 6/218 (2%)
Query: 98 KIFQGMELMN--VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALI 155
K+ + +ELM+ VK D +L C G ++ AK V Y QS+ G + +I
Sbjct: 281 KVKEAIELMDKGVKADADCFYALFELC---GKIEDAKKVHDYFLQSTCR-GDVRLNKKVI 336
Query: 156 DMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNA 215
+M KCG+M A ++F+ M RD+ + MI G + + ++ + LF +M GL P
Sbjct: 337 EMYGKCGSMTDARRVFDHMKDRDIDLWHLMINGYASNNLGDEGLQLFEQMRQSGLKPTAE 396
Query: 216 AFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKS 275
F +L+AC+ VEEG +FE+MK++Y P EHY ++D+L +SG + E E ++
Sbjct: 397 TFLAVLSACASAEAVEEGFLHFESMKNEYGFNPGTEHYLGVIDVLGKSGYINEIQEYIQK 456
Query: 276 MPVESHASAWGALLGACKFYGEVELGEIVANRLFELEP 313
+P E WGAL + +G+V+L + + L+P
Sbjct: 457 LPFEPTVDVWGALRNYARIHGDVDLEDRAEELMVALDP 494
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 14/156 (8%)
Query: 29 GDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLI 84
G + +A+KV D + DV +I+ Y K G + AR +FD RD LW ++I
Sbjct: 308 GKIEDAKKVHDYFLQSTCRGDVRLNKKVIEMYGKCGSMTDARRVFDHMKDRDIDLWHLMI 367
Query: 85 SGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACS-----QVGNLDLAKWVDCYLS 139
+GYA N L +E L++F+ M +KP ++++SAC+ + G L + Y
Sbjct: 368 NGYASNNLGDEGLQLFEQMRQSGLKPTAETFLAVLSACASAEAVEEGFLHFESMKNEY-- 425
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
+ G H + +ID+ K G ++ + +++P
Sbjct: 426 --GFNPGTEHYL-GVIDVLGKSGYINEIQEYIQKLP 458
>30138.m004056 pentatricopeptide repeat-containing protein, putative
Length = 374
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 109/187 (58%), Gaps = 4/187 (2%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
E V +I Y D +R LF++ P + W+ +I Y G EAL +F
Sbjct: 164 ESHVFVRNTLIHMYGIFKDFEISRQLFEEIPSPELVAWNTVIGCYVDCGRFKEALDMFSR 223
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQ-THVVAALIDMNAKC 161
M ++++PDE +V +++ACS +G LD+ +W+ +S + +G+ + ++IDM AKC
Sbjct: 224 MLKLHIEPDEATLVVILAACSALGELDIGRWIHSCISNTG--LGRFVEINNSIIDMYAKC 281
Query: 162 GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLI-PDNAAFTVI 220
G ++ A + F +M +R+ ++ +MI GL+ HG+ +A+ LF+KML + L+ PD+ F +
Sbjct: 282 GALEEAYEAFNKMSQRNTVTWNTMILGLATHGHTNEALVLFSKMLEQKLMEPDSVTFLGV 341
Query: 221 LTACSHG 227
L ACSHG
Sbjct: 342 LCACSHG 348
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 123/253 (48%), Gaps = 6/253 (2%)
Query: 68 LFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGN 127
+F+ D FLW+ +I G+ ++ P A + ++ M+ + D + L+ C Q+G+
Sbjct: 88 VFENIECPDEFLWNTMIRGFGKSNEPQRAFEYYKRMQEEGLMADNFTFSFLIKVCGQLGS 147
Query: 128 LDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQ 187
+ L K + C + + + V LI M + + + +LFEE+P +L ++ ++I
Sbjct: 148 VLLGKQMHCSVLKYGFE-SHVFVRNTLIHMYGIFKDFEISRQLFEEIPSPELVAWNTVIG 206
Query: 188 GLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMV 247
G ++A+ +F++ML + PD A VIL ACS ++ G+ + + S +
Sbjct: 207 CYVDCGRFKEALDMFSRMLKLHIEPDEATLVVILAACSALGELDIGR-WIHSCISNTGLG 265
Query: 248 PSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANR 307
E ++D+ ++ G L+EAYE M + + W ++ +G ++ ++
Sbjct: 266 RFVEINNSIIDMYAKCGALEEAYEAFNKMS-QRNTVTWNTMILGLATHGHTNEALVLFSK 324
Query: 308 LFE---LEPENSS 317
+ E +EP++ +
Sbjct: 325 MLEQKLMEPDSVT 337
>28448.m000361 pentatricopeptide repeat-containing protein, putative
Length = 453
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 179/362 (49%), Gaps = 27/362 (7%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE-RDVVSFTVMIDGYAKV 59
+ A++VF +M ER++ +W ++ G +K ++ AR++FD ++VV++T M+ GY ++
Sbjct: 72 NEARQVFDRMLERDVITWTTVITGYIKCRLIVEARRLFDRADAMKNVVTWTAMVSGYMRL 131
Query: 60 GDIA------SARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEY 113
+ AR LFD+ PKRD W+ +++G A+NG +EA KIF M P+
Sbjct: 132 NQVLEAERVDEARRLFDEMPKRDVISWTAMVAGLARNGRIDEARKIFDKM------PERN 185
Query: 114 IMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEE 173
++ N+ L + + + D+ + + N + + A KL +E
Sbjct: 186 VVSWNAMITGYAKNMRLVEAFELFERMPERDLPSWNTMITGFIQNKE---LKLARKLLDE 242
Query: 174 MPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE-GLIPDNAAFTVILTACSHGRLVEE 232
MP++++ S+ +MI G G +E A+ +F +M+ + G++P+ F +L ACS + E
Sbjct: 243 MPEKNVVSWTTMITGYVQEGESEAALNIFMEMIRDGGVMPNEGTFVNVLGACSDLAGLGE 302
Query: 233 GKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPV-ESHASAWGALLGA 291
G+ + M SK P + ++++ S+ G+L A ++ + + +W ++ A
Sbjct: 303 GQQVHQ-MISKTVYQDMPFVVSALINMYSKCGELDMARKMFDNRTTSQRDLVSWNCMVAA 361
Query: 292 CKFYGEVELGEIVAN-----RLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERG 346
+G G+ N R EP++ S LLS+ A +S+ + +K++
Sbjct: 362 YAHHG---CGKEAINLFNEMRALGFEPDDISYVGLLSACSHAGLVKEGLSYFQELVKDKS 418
Query: 347 LR 348
++
Sbjct: 419 IQ 420
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 47/257 (18%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
+V F I + G I AR +FD+ +RD W+ +I+GY + L EA ++F +
Sbjct: 54 EVARFNWHITKLCREGKINEARQVFDRMLERDVITWTTVITGYIKCRLIVEARRLFDRAD 113
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNA--KCG 162
M ++ W T +V+ + +N +
Sbjct: 114 AMK---------------------NVVTW--------------TAMVSGYMRLNQVLEAE 138
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
+D A +LF+EMPKRD+ S+ +M+ GL+ +G ++A +F+KM ++ NA +I
Sbjct: 139 RVDEARRLFDEMPKRDVISWTAMVAGLARNGRIDEARKIFDKMPERNVVSWNA---MITG 195
Query: 223 ACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHA 282
+ RLV E FE M + +PS + M+ ++ +LK A +LL MP E +
Sbjct: 196 YAKNMRLV-EAFELFERMPERD--LPS---WNTMITGFIQNKELKLARKLLDEMP-EKNV 248
Query: 283 SAWGALLGACKFYGEVE 299
+W ++ GE E
Sbjct: 249 VSWTTMITGYVQEGESE 265
>29794.m003469 pentatricopeptide repeat-containing protein, putative
Length = 367
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 131/282 (46%), Gaps = 48/282 (17%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGG----DLINARKVFDDMPERDVVSFT-------- 50
A +F MP RNL SWN+M+ G G ++ R++ +D E D + T
Sbjct: 64 AACMFDFMPVRNLISWNSMISGYSIAGFGEKAVVLFREMLEDGQEPDEFTLTSALKACSD 123
Query: 51 -----------------------------VMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ID Y K G + A+ +F + +++ +S
Sbjct: 124 LAAVREGSQIHSFLIISGFPYLIKTSIAGALIDQYVKCGKLCEAQRVFSQIEEKNVISFS 183
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
L GYA G +A+ +F+ +V+ D +++ S++ + ++ K + Y
Sbjct: 184 ALFLGYAHGGNLADAMSLFRRFRESDVEADGFVLSSMIGVFADFALVEQGKQMHAY---- 239
Query: 142 SIDI---GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
SI + V +++DM KCG +D A + F EM RD+ S+ MI G HG ++A
Sbjct: 240 SIKVPSGSDLSVCNSIVDMYLKCGVIDEAERFFAEMSTRDVISWTVMITGYGKHGLGKEA 299
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
V LFNKM ++ + PD+ + +L ACSH LVEEG+ Y + M
Sbjct: 300 VCLFNKMQSDDIEPDDVTYLAVLLACSHSGLVEEGQWYLQFM 341
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 128/277 (46%), Gaps = 12/277 (4%)
Query: 46 VVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMEL 105
+V ++D Y+K G I A +FD P R+ W+ +ISGY+ G +A+ +F+ M
Sbjct: 45 IVVANSIVDMYSKCGRIKEAACMFDFMPVRNLISWNSMISGYSIAGFGEKAVVLFREMLE 104
Query: 106 MNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID-IGQTHVVAALIDMNAKCGNM 164
+PDE+ + S + ACS + + + +L S + +T + ALID KCG +
Sbjct: 105 DGQEPDEFTLTSALKACSDLAAVREGSQIHSFLIISGFPYLIKTSIAGALIDQYVKCGKL 164
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
A ++F ++ ++++ S+ ++ G + G A+ LF + + D + ++
Sbjct: 165 CEAQRVFSQIEEKNVISFSALFLGYAHGGNLADAMSLFRRFRESDVEADGFVLSSMIGVF 224
Query: 225 SHGRLVEEGKHYFETMKSKYSMVPSPEHYAC---MVDLLSRSGQLKEAYELLKSMPVESH 281
+ LVE+GK M + VPS + +VD+ + G + EA M
Sbjct: 225 ADFALVEQGKQ----MHAYSIKVPSGSDLSVCNSIVDMYLKCGVIDEAERFFAEMSTRDV 280
Query: 282 ASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
S W ++ YG+ LG+ +++ ++ P
Sbjct: 281 IS-WTVMITG---YGKHGLGKEAVCLFNKMQSDDIEP 313
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 4/190 (2%)
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
M L VKP+E+ + A S + + + ++S DI V +++DM +KCG
Sbjct: 1 MGLSGVKPNEFTFSMNLKASSMLNRPYIGMQIHANCTKSGNDI-VIVVANSIVDMYSKCG 59
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
+ A +F+ MP R+L S+ SMI G SI G+ E+AV LF +ML +G PD T L
Sbjct: 60 RIKEAACMFDFMPVRNLISWNSMISGYSIAGFGEKAVVLFREMLEDGQEPDEFTLTSALK 119
Query: 223 ACSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVES 280
ACS V EG H F + S + + ++D + G+L EA + + ++
Sbjct: 120 ACSDLAAVREGSQIHSFLII-SGFPYLIKTSIAGALIDQYVKCGKLCEAQRVFSQIEEKN 178
Query: 281 HASAWGALLG 290
S LG
Sbjct: 179 VISFSALFLG 188
>29685.m000500 pentatricopeptide repeat-containing protein, putative
Length = 374
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 117/197 (59%), Gaps = 4/197 (2%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPER-DVVSFTVMIDGYAKVGDIASARALFDKAPKRDA 77
NA++ + +++VF++ P R D+V++ M+ G+A+ G +A +FD+ +RD
Sbjct: 162 NALIHFFFACCRVECSKQVFEENPRRCDIVTWNAMLAGFARDGQVAVVEKMFDEMYERDV 221
Query: 78 FLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY 137
W+ +I Y NG E L+ F+ M + PDE V+++SA +Q+G L+ + V
Sbjct: 222 ISWNTMIMAYVHNGKLEEGLECFRRMRESELVPDEATFVTVLSASAQLGLLEHGRLVRSI 281
Query: 138 LSQSSIDIGQTHVV-AALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAE 196
+ ++++ T + AL+DM AKCG +++ LF+++P+RD+ ++ MI GL+ HG +
Sbjct: 282 I--DALNVTMTSALGTALLDMYAKCGCIEQCRLLFDKLPQRDISTWNVMICGLASHGLGK 339
Query: 197 QAVGLFNKMLNEGLIPD 213
+A+ LF + L++GL P
Sbjct: 340 EAISLFERFLSKGLRPS 356
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 16/188 (8%)
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+I ++++ LP E++ + M ++P+ Y L C + + C++
Sbjct: 94 MIRCFSKSELPLESVVFYSSMLRRFIRPNNYSFTFLFQGCGKGLGFIEGVQIHCHV---- 149
Query: 143 IDIG---QTHVVAALIDMNAKCGNMDRANKLFEEMPKR-DLFSYCSMIQGLSIHGYAEQA 198
I G +V ALI C ++ + ++FEE P+R D+ ++ +M+ G + G
Sbjct: 150 IKFGFCEDVYVRNALIHFFFACCRVECSKQVFEENPRRCDIVTWNAMLAGFARDGQVAVV 209
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+F++M +I N T+I+ +G+L EEG F M+ +VP A V
Sbjct: 210 EKMFDEMYERDVISWN---TMIMAYVHNGKL-EEGLECFRRMRES-ELVPDE---ATFVT 261
Query: 259 LLSRSGQL 266
+LS S QL
Sbjct: 262 VLSASAQL 269
>29844.m003278 pentatricopeptide repeat-containing protein, putative
Length = 463
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 137/285 (48%), Gaps = 41/285 (14%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTV----- 51
+A+++F ++PERN+ +WNA + V G NA F ++ E D +F V
Sbjct: 160 QDAQKLFDELPERNVVTWNAYISNAVLYGRYQNAAVAFVELRRAGCEPDSTTFCVFFNAC 219
Query: 52 ------------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ID Y K ++ A +F K R+A W
Sbjct: 220 ADQLYVDLGRQLHGFVIRSGFEKSVSVLNGLIDFYGKCKEVRLAEMVFGKMENRNAVSWC 279
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+++ QNG +A F ++P +Y++ S++SAC+ + L+L + ++
Sbjct: 280 SMVAACEQNGEEEKACLFFVEGRKEGIEPTDYMVSSVISACAGLAGLELGRSFHALAVKA 339
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
++ G V +AL+DM KCG ++ + + F EM +R+L ++ ++I G + G+AE AV L
Sbjct: 340 CLE-GDIFVGSALVDMYGKCGGIEDSEQAFHEMSERNLVTWNALIGGYAHQGHAEMAVRL 398
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSM 246
F +M E ++P+ +L+AC G VE G F +M+ + ++
Sbjct: 399 FKEMTTE-VVPNYVTLVCVLSACGRGGAVELGMEIFGSMRDRRTL 442
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 149/371 (40%), Gaps = 47/371 (12%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE----------------- 43
++A+ V P R++ +W +++ G V+ G A F +M
Sbjct: 59 NSAQLVLHLTPTRSVVTWTSLISGSVQNGHFSFALYHFFNMRRDNIQPNDFTFPCAFKAS 118
Query: 44 ----------------------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
DV D Y+K G A+ LFD+ P+R+ W+
Sbjct: 119 ASLLLPFVGKQIHAIAVKFGQINDVFVGCSAFDMYSKTGLKQDAQKLFDELPERNVVTWN 178
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
IS G A F + +PD +AC+ +DL + + ++ +S
Sbjct: 179 AYISNAVLYGRYQNAAVAFVELRRAGCEPDSTTFCVFFNACADQLYVDLGRQLHGFVIRS 238
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ V+ LID KC + A +F +M R+ S+CSM+ +G E+A
Sbjct: 239 GFE-KSVSVLNGLIDFYGKCKEVRLAEMVFGKMENRNAVSWCSMVAACEQNGEEEKACLF 297
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F + EG+ P + + +++AC+ +E G+ F + K + + +VD+
Sbjct: 298 FVEGRKEGIEPTDYMVSSVISACAGLAGLELGRS-FHALAVKACLEGDIFVGSALVDMYG 356
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLF-ELEPENSSPYV 320
+ G ++++ + M E + W AL+G G E+ A RLF E+ E YV
Sbjct: 357 KCGGIEDSEQAFHEMS-ERNLVTWNALIGGYAHQGHAEM----AVRLFKEMTTEVVPNYV 411
Query: 321 LLSSIYAAADQ 331
L + +A +
Sbjct: 412 TLVCVLSACGR 422
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 133/285 (46%), Gaps = 18/285 (6%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I Y+K+ SA+ + P R W+ LISG QNG + AL F M N++P+
Sbjct: 48 LISMYSKLDLPNSAQLVLHLTPTRSVVTWTSLISGSVQNGHFSFALYHFFNMRRDNIQPN 107
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTH---VVAALIDMNAKCGNMDRAN 168
++ A + + L +V + ++ GQ + V + DM +K G A
Sbjct: 108 DFTFPCAFKASASL----LLPFVGKQIHAIAVKFGQINDVFVGCSAFDMYSKTGLKQDAQ 163
Query: 169 KLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGR 228
KLF+E+P+R++ ++ + I ++G + A F ++ G PD+ F V AC+
Sbjct: 164 KLFDELPERNVVTWNAYISNAVLYGRYQNAAVAFVELRRAGCEPDSTTFCVFFNACADQL 223
Query: 229 LVEEGK--HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWG 286
V+ G+ H F ++S + S ++D + +++ A + M +A +W
Sbjct: 224 YVDLGRQLHGF-VIRSGFE--KSVSVLNGLIDFYGKCKEVRLAEMVFGKME-NRNAVSWC 279
Query: 287 ALLGACKFYGEVELGEI--VANRLFELEPENSSPYVLLSSIYAAA 329
+++ AC+ GE E + V R +EP + Y++ S I A A
Sbjct: 280 SMVAACEQNGEEEKACLFFVEGRKEGIEPTD---YMVSSVISACA 321
>29841.m002773 pentatricopeptide repeat-containing protein, putative
Length = 653
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 157/349 (44%), Gaps = 52/349 (14%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGG------------------------------- 29
+NA VF +M ERNL SWN +VGG K G
Sbjct: 154 NNAWNVFGRMGERNLFSWNVLVGGYAKAGFFDEALCLYHRMLWVGIKPDIYTFPCVLRSC 213
Query: 30 ----DLINARKVFDDMP----ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
D I +++ + E DV + +I Y K G + SAR +FDK +RD W+
Sbjct: 214 GGANDFIRGKEIHCHVIRFGFETDVSAVNALITMYVKCGCVGSARTVFDKMLQRDRISWN 273
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+ISGY +NG E L +F M ++V PD M S++SAC +G+ L + + Y+ ++
Sbjct: 274 AMISGYFENGECVEGLNLFLQMLELSVDPDLMTMTSVISACELLGDDRLGREIHGYVVRT 333
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
V + LI M A G A K+F E RD+ S+ +MI G + ++A+
Sbjct: 334 GYG-NDVSVHSLLIQMYASLGYWKEAEKVFSETECRDVVSWTAMISGYEGNLMHDKALET 392
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
+ M G++PD +L+AC+ ++ G E + ++ ++ ++D+ S
Sbjct: 393 YKNMELAGIVPDEITIACVLSACASLGQLDLGMRLHE-LANRMGLMSFVIVANSLIDMYS 451
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE 310
+ + +A E+ + + + +W +++ LG + NR FE
Sbjct: 452 KCKCIDKALEVFHCIQ-DKNVISWTSII----------LGLRINNRSFE 489
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 144/308 (46%), Gaps = 50/308 (16%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE------------------ 43
+A+ VF +M +R+ SWNAM+ G + G+ + +F M E
Sbjct: 256 SARTVFDKMLQRDRISWNAMISGYFENGECVEGLNLFLQMLELSVDPDLMTMTSVISACE 315
Query: 44 ---------------------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
DV +++I YA +G A +F + RD W+
Sbjct: 316 LLGDDRLGREIHGYVVRTGYGNDVSVHSLLIQMYASLGYWKEAEKVFSETECRDVVSWTA 375
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+ISGY N + ++AL+ ++ MEL + PDE + ++SAC+ +G LDL + ++
Sbjct: 376 MISGYEGNLMHDKALETYKNMELAGIVPDEITIACVLSACASLGQLDLGMRLHELANRMG 435
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ + V +LIDM +KC +D+A ++F + +++ S+ S+I GL I+ + +A+ F
Sbjct: 436 L-MSFVIVANSLIDMYSKCKCIDKALEVFHCIQDKNVISWTSIILGLRINNRSFEALSFF 494
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGK----HYFETMKSKYSMVPSPEHYACMVD 258
KM L P++ +L+AC+ + GK H +T +P+ ++D
Sbjct: 495 RKM-KRNLKPNSITLISVLSACARIGALMCGKEIHAHALKTAMVYEGFLPNA-----ILD 548
Query: 259 LLSRSGQL 266
+ R G+L
Sbjct: 549 MYVRCGKL 556
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 97/193 (50%), Gaps = 12/193 (6%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
++ Y + D+ +A +F + +R+ F W+VL+ GYA+ G +EAL ++ M + +KPD
Sbjct: 143 LLSMYVRFSDLNNAWNVFGRMGERNLFSWNVLVGGYAKAGFFDEALCLYHRMLWVGIKPD 202
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
Y ++ +C + K + C++ + + V ALI M KCG + A +F
Sbjct: 203 IYTFPCVLRSCGGANDFIRGKEIHCHVIRFGFET-DVSAVNALITMYVKCGCVGSARTVF 261
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS------ 225
++M +RD S+ +MI G +G + + LF +ML + PD T +++AC
Sbjct: 262 DKMLQRDRISWNAMISGYFENGECVEGLNLFLQMLELSVDPDLMTMTSVISACELLGDDR 321
Query: 226 -----HGRLVEEG 233
HG +V G
Sbjct: 322 LGREIHGYVVRTG 334
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 129/273 (47%), Gaps = 46/273 (16%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLIN--ARKVFDDMPERDVV------------- 47
A++VF + R++ SW AM+ G G+L++ A + + +M +V
Sbjct: 358 AEKVFSETECRDVVSWTAMISGY--EGNLMHDKALETYKNMELAGIVPDEITIACVLSAC 415
Query: 48 ----------------------SFTV----MIDGYAKVGDIASARALFDKAPKRDAFLWS 81
SF + +ID Y+K I A +F ++ W+
Sbjct: 416 ASLGQLDLGMRLHELANRMGLMSFVIVANSLIDMYSKCKCIDKALEVFHCIQDKNVISWT 475
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I G N EAL F+ M+ N+KP+ ++S++SAC+++G L K + + ++
Sbjct: 476 SIILGLRINNRSFEALSFFRKMK-RNLKPNSITLISVLSACARIGALMCGKEIHAHALKT 534
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
++ + + + A++DM +CG + A F + K D+ ++ +++G + G AV L
Sbjct: 535 AM-VYEGFLPNAILDMYVRCGKLGLALNQFN-LYKEDVAAWNILMRGYAEQGQGAMAVEL 592
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK 234
F+KM+ + PD+ + +L ACS +VEE K
Sbjct: 593 FHKMIESKVNPDDVTYIALLCACSRSGMVEEAK 625
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
++D Y + G + A F+ K D W++L+ GYA+ G A+++F M V PD
Sbjct: 546 ILDMYVRCGKLGLALNQFN-LYKEDVAAWNILMRGYAEQGQGAMAVELFHKMIESKVNPD 604
Query: 112 EYIMVSLMSACSQVGNLDLAKWV 134
+ ++L+ ACS+ G ++ AKW
Sbjct: 605 DVTYIALLCACSRSGMVEEAKWT 627
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 114/289 (39%), Gaps = 34/289 (11%)
Query: 91 GLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHV 150
G A+K M+ + + ++ ++L+ C +V + S ++ +
Sbjct: 80 GKLEHAIKHLNSMQELKILVEDETFIALIRLCENKRGYTEGDYVFKAVLNSLVNPLSVRL 139
Query: 151 VAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGL 210
AL+ M + +++ A +F M +R+LFS+ ++ G + G+ ++A+ L+++ML G+
Sbjct: 140 GNALLSMYVRFSDLNNAWNVFGRMGERNLFSWNVLVGGYAKAGFFDEALCLYHRMLWVGI 199
Query: 211 IPDNAAFTVILTACSHGRLVEEGKHY--------FE----------TMKSKYSMVPSPE- 251
PD F +L +C GK FE TM K V S
Sbjct: 200 KPDIYTFPCVLRSCGGANDFIRGKEIHCHVIRFGFETDVSAVNALITMYVKCGCVGSART 259
Query: 252 -----------HYACMVDLLSRSGQLKEAYELLKSM---PVESHASAWGALLGACKFYGE 297
+ M+ +G+ E L M V+ +++ AC+ G+
Sbjct: 260 VFDKMLQRDRISWNAMISGYFENGECVEGLNLFLQMLELSVDPDLMTMTSVISACELLGD 319
Query: 298 VELGEIVANRLFELEPENS-SPYVLLSSIYAAADQWLDVSHVKNKMKER 345
LG + + N S + LL +YA+ W + V ++ + R
Sbjct: 320 DRLGREIHGYVVRTGYGNDVSVHSLLIQMYASLGYWKEAEKVFSETECR 368
>29912.m005392 pentatricopeptide repeat-containing protein, putative
Length = 388
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 120/220 (54%), Gaps = 7/220 (3%)
Query: 98 KIFQGMELMN--VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI--DIGQTHVVAA 153
K+ + +E M D + +L+ C + LD+ K V +L +S+ DI +
Sbjct: 102 KVEEALECMGQGASADCSVFGALLDCCGSLKLLDMGKRVHEFLRRSTFADDIEMNN---K 158
Query: 154 LIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPD 213
LI+M CG++ A ++F++M +R++ S+ +I G + +G + + LF +M GL PD
Sbjct: 159 LIEMYGNCGSVRDARRVFDKMRERNMRSWHLLISGYAANGQGDDGLLLFEEMKESGLRPD 218
Query: 214 NAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELL 273
F+V+ ACS ++EG +FE ++++Y M P +HY ++D+L ++G L EA E +
Sbjct: 219 ENTFSVVFAACSSAGAIKEGLLFFEALRNEYGMSPRIDHYLGVIDILGKAGHLCEAKEFI 278
Query: 274 KSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEP 313
+ MP E W AL + +G++EL + V L L+P
Sbjct: 279 ERMPFEPTMEVWMALRSFAQIHGDIELEDHVQQLLVALDP 318
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
Query: 35 RKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPN 94
R F D D+ +I+ Y G + AR +FDK +R+ W +LISGYA NG +
Sbjct: 146 RSTFAD----DIEMNNKLIEMYGNCGSVRDARRVFDKMRERNMRSWHLLISGYAANGQGD 201
Query: 95 EALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA-KWVDCYLSQSSIDIGQTHVVAA 153
+ L +F+ M+ ++PDE + +ACS G + + + ++ + H +
Sbjct: 202 DGLLLFEEMKESGLRPDENTFSVVFAACSSAGAIKEGLLFFEALRNEYGMSPRIDHYL-G 260
Query: 154 LIDMNAKCGNMDRANKLFEEMP 175
+ID+ K G++ A + E MP
Sbjct: 261 VIDILGKAGHLCEAKEFIERMP 282
>30131.m006988 pentatricopeptide repeat-containing protein, putative
Length = 553
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 137/290 (47%), Gaps = 25/290 (8%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N V L++ G L AR +FD MP ++ VS +MI GY K +++ AR LFD R A
Sbjct: 50 NYQVKSLLQRGQLSEARDLFDQMPHKNTVSVNMMILGYVKERNLSIARELFDSMVDRTAV 109
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W++LI GY Q +EA K+F M KPD +L+S C+ D +
Sbjct: 110 TWTILIGGYCQFDQFSEAFKLFSNMIRDGKKPDYVTFATLLSGCN-----------DPEM 158
Query: 139 SQSSIDIGQTHVVA-----------ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQ 187
++ + THVV +L+D K +D A+++F+EM +RD +Y ++I
Sbjct: 159 TKELFQV-HTHVVKLGHGSAVIICNSLVDSYCKMHRLDLAHRIFKEMVERDSVTYNALIT 217
Query: 188 GLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMV 247
G G E A+ LF +M N G P + F +L AC + G+ K +V
Sbjct: 218 GYGKEGLNEDAIRLFTQMQNLGFEPSDFTFQAVLCACIGLDDIIFGQQ-IHGYAVKMGLV 276
Query: 248 PSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
+ ++D S+ + +A++L MP E ++ ++ A + G+
Sbjct: 277 WNVFVGNSLLDFYSKHDCVNDAWKLFSKMP-ELDGVSYNVMITAYSWIGQ 325
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 1/168 (0%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
++D YAK G A +F K + W+ LIS Q GL E LK+F M NV D
Sbjct: 386 LVDMYAKCGRSEYAERIFVKLSSKSTVPWTALISANVQKGLLEEGLKLFNEMRRTNVSAD 445
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
+ S++ A + + ++ L K + YL +S + +AL+DM AKCG++ A + F
Sbjct: 446 QATFASVLKASANLASISLGKQLHSYLIRSGF-WSNVYSGSALVDMYAKCGSVKEAIRTF 504
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTV 219
+EMP R++ S+ ++I + +G E + F +M+ G PD+ A V
Sbjct: 505 KEMPGRNVISWNALISAYAQNGDGEATLKSFEEMVLSGYQPDSLAAIV 552
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 150/340 (44%), Gaps = 46/340 (13%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE----------------- 43
D A R+F +M ER+ ++NA++ G K G +A ++F M
Sbjct: 195 DLAHRIFKEMVERDSVTYNALITGYGKEGLNEDAIRLFTQMQNLGFEPSDFTFQAVLCAC 254
Query: 44 --RDVVSFTVMIDGYAK---------VGD-----------IASARALFDKAPKRDAFLWS 81
D + F I GYA VG+ + A LF K P+ D ++
Sbjct: 255 IGLDDIIFGQQIHGYAVKMGLVWNVFVGNSLLDFYSKHDCVNDAWKLFSKMPELDGVSYN 314
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
V+I+ Y+ G E++ +F+ ++ + + +++S +L + + + + +
Sbjct: 315 VMITAYSWIGQYRESIDLFRELQFTKFERRNFPFATMLSIAGNTLDLQMGQQLHSHAIVT 374
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
D+ + V +L+DM AKCG + A ++F ++ + + ++I G E+ + L
Sbjct: 375 GADL-EVLVANSLVDMYAKCGRSEYAERIFVKLSSKSTVPWTALISANVQKGLLEEGLKL 433
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDL 259
FN+M + D A F +L A ++ + GK H + +S V S + +VD+
Sbjct: 434 FNEMRRTNVSADQATFASVLKASANLASISLGKQLHSYLIRSGFWSNVYSG---SALVDM 490
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
++ G +KEA K MP + S W AL+ A G+ E
Sbjct: 491 YAKCGSVKEAIRTFKEMPGRNVIS-WNALISAYAQNGDGE 529
>28859.m000320 pentatricopeptide repeat-containing protein, putative
Length = 834
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 111/194 (57%), Gaps = 12/194 (6%)
Query: 56 YAKVGDIASARALFDK-APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYI 114
Y + GD+ +F K + +RD W+ +ISGY N +A+ + M + D +I
Sbjct: 499 YGRCGDMDYCEKIFSKMSNRRDEVSWNSMISGYIHNDFLPKAMDLVWIMMQSGQRLDTFI 558
Query: 115 MVSLMSACSQVGNLDL-----AKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
+ +++SAC+ V L+ A + YL+ + V +AL+DM +KCG +D A++
Sbjct: 559 LATILSACASVATLERGMEAHACSIRAYLNFDVV------VGSALVDMYSKCGRIDYASR 612
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
FE MP R+L+S+ SMI G + HG + A+ LF +M +G +PD+ F +L+ACSH L
Sbjct: 613 FFESMPLRNLYSWNSMISGYARHGRGDVALQLFTQMKLDGQLPDHVTFVGVLSACSHVGL 672
Query: 230 VEEGKHYFETMKSK 243
V+EG +F++M +
Sbjct: 673 VDEGFKHFKSMTGQ 686
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 121/267 (45%), Gaps = 45/267 (16%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLV--KGGD----------------------LINARK 36
D AK++F QM RN S N+++ GLV K G+ L++A
Sbjct: 198 DYAKKIFEQMGMRNAVSMNSLMVGLVTQKCGEEAAEVFMEMRNIVNINLDSYVILLSAFT 257
Query: 37 VFDDMPE-----RDVVSFTV--------------MIDGYAKVGDIASARALFDKAPKRDA 77
F + E R+V F + +I+ YAK G + AR++F RDA
Sbjct: 258 KFTLLEEGRRKGREVHGFAIRTGLNDIKVAIGNGLINMYAKCGAVDDARSVFRLMNDRDA 317
Query: 78 FLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY 137
W+ +ISG+ Q+ +A+K + M + P + ++S +S+C+ +G + L + +
Sbjct: 318 VSWNSMISGFDQSECFEDAVKCYHKMRRTGLMPSNFSLISTLSSCASLGWIMLGQQLQSE 377
Query: 138 LSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYA-E 196
+ +D+ V AL+ + A+ G + K+F M + D S +MI L+ +
Sbjct: 378 GLKLGLDL-DVSVSNALLALYAETGYLAECRKVFSLMLQFDQVSCNTMIGALANSEVSIS 436
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTA 223
+AV F +M+ GL + F IL A
Sbjct: 437 EAVEFFLEMMRAGLNLNRVTFINILAA 463
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 7/181 (3%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME-LMNV 108
+ ++ G+++ G A+ +F++ R+A + L+ G EA ++F M ++N+
Sbjct: 185 SALVSGFSRFGLFDYAKKIFEQMGMRNAVSMNSLMVGLVTQKCGEEAAEVFMEMRNIVNI 244
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAA----LIDMNAKCGNM 164
D Y++ L+SA ++ L+ + + +I G + A LI+M AKCG +
Sbjct: 245 NLDSYVI--LLSAFTKFTLLEEGRRKGREVHGFAIRTGLNDIKVAIGNGLINMYAKCGAV 302
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
D A +F M RD S+ SMI G E AV ++KM GL+P N + L++C
Sbjct: 303 DDARSVFRLMNDRDAVSWNSMISGFDQSECFEDAVKCYHKMRRTGLMPSNFSLISTLSSC 362
Query: 225 S 225
+
Sbjct: 363 A 363
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 117/271 (43%), Gaps = 49/271 (18%)
Query: 10 MPERNLTSWNAMVGGLVKGGDLINARKVFDDM---------------------------- 41
MPERN +W ++ G G A +F M
Sbjct: 1 MPERNCVTWACLISGYNNNGMPKEACGIFKGMILEGYLPNCFAFGAALKACQDLKLGMQI 60
Query: 42 --------PERDVVSFTVMIDGYAK-VGDIASARALFDKAPKRDAFLWSVLISGYAQNGL 92
DVV V+I Y + I AR FD+ +++ + +IS Y+Q G
Sbjct: 61 HGLILKSPNANDVVLSNVLISMYGNSLASIDYARRAFDEIKIKNSISCNSIISVYSQRGY 120
Query: 93 PNEALKIFQGMEL----MNVKPDEYIMVSLMSACSQV---GNLDLAKWVDCYLSQSSIDI 145
+A +IF M+ + KP+EY SL++A G+ L + + + + S +
Sbjct: 121 TGDAFQIFSSMQRKHSGFSFKPNEYTFGSLITAAGSAVDSGSQLLEQMLT--MVEKSGLL 178
Query: 146 GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM 205
+V +AL+ ++ G D A K+FE+M R+ S S++ GL E+A +F +M
Sbjct: 179 SDMYVGSALVSGFSRFGLFDYAKKIFEQMGMRNAVSMNSLMVGLVTQKCGEEAAEVFMEM 238
Query: 206 LNEGLIPDNA-AFTVILTACSHGRLVEEGKH 235
N ++ N ++ ++L+A + L+EEG+
Sbjct: 239 RN--IVNINLDSYVILLSAFTKFTLLEEGRR 267
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
DVV + ++D Y+K G I A F+ P R+ + W+ +ISGYA++G + AL++F M+
Sbjct: 590 DVVVGSALVDMYSKCGRIDYASRFFESMPLRNLYSWNSMISGYARHGRGDVALQLFTQMK 649
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLD 129
L PD V ++SACS VG +D
Sbjct: 650 LDGQLPDHVTFVGVLSACSHVGLVD 674
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 16/227 (7%)
Query: 73 PKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAK 132
P+R+ W+ LISGY NG+P EA IF+GM L P+ + + + AC +L L
Sbjct: 2 PERNCVTWACLISGYNNNGMPKEACGIFKGMILEGYLPNCFAFGAALKACQ---DLKLGM 58
Query: 133 WVDCYL--SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLS 190
+ + S ++ D+ ++V+ ++ ++D A + F+E+ ++ S S+I S
Sbjct: 59 QIHGLILKSPNANDVVLSNVLISMY--GNSLASIDYARRAFDEIKIKNSISCNSIISVYS 116
Query: 191 IHGYAEQAVGLFNKMLNE----GLIPDNAAFTVILTACSHGRLVEEGKHYFE---TMKSK 243
GY A +F+ M + P+ F ++TA G V+ G E TM K
Sbjct: 117 QRGYTGDAFQIFSSMQRKHSGFSFKPNEYTFGSLITAA--GSAVDSGSQLLEQMLTMVEK 174
Query: 244 YSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLG 290
++ + +V SR G A ++ + M + + S ++G
Sbjct: 175 SGLLSDMYVGSALVSGFSRFGLFDYAKKIFEQMGMRNAVSMNSLMVG 221
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 140/339 (41%), Gaps = 46/339 (13%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP------------------ 42
D+A+ VF M +R+ SWN+M+ G + +A K + M
Sbjct: 303 DDARSVFRLMNDRDAVSWNSMISGFDQSECFEDAVKCYHKMRRTGLMPSNFSLISTLSSC 362
Query: 43 ---------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ DV ++ YA+ G +A R +F + D +
Sbjct: 363 ASLGWIMLGQQLQSEGLKLGLDLDVSVSNALLALYAETGYLAECRKVFSLMLQFDQVSCN 422
Query: 82 VLISGYAQNGLP-NEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+I A + + +EA++ F M + + +++++A S + L++ + + +
Sbjct: 423 TMIGALANSEVSISEAVEFFLEMMRAGLNLNRVTFINILAAVSSLSQSGLSQQIHALMLK 482
Query: 141 SSIDIGQTHVVA-ALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQA 198
+IG + + AL+ +CG+MD K+F +M +RD S+ SMI G + + +A
Sbjct: 483 --YNIGDDNAIENALLACYGRCGDMDYCEKIFSKMSNRRDEVSWNSMISGYIHNDFLPKA 540
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+ L M+ G D IL+AC+ +E G Y A +VD
Sbjct: 541 MDLVWIMMQSGQRLDTFILATILSACASVATLERGMEAHACSIRAYLNFDVVVGSA-LVD 599
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
+ S+ G++ A +SMP+ + S W +++ +G
Sbjct: 600 MYSKCGRIDYASRFFESMPLRNLYS-WNSMISGYARHGR 637
>29765.m000741 pentatricopeptide repeat-containing protein, putative
Length = 557
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D++ ++ YAK G ++ A F + +D +S +ISG QNG EAL +F M
Sbjct: 360 DLMLGNTLLSTYAKCGTVSDAIRYFHEMELKDEVSYSAIISGCMQNGNAKEALSMFHRMR 419
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
L + P+ MV ++ AC+ + L Y + + ALIDM AKCG +
Sbjct: 420 LSGMDPELATMVGILPACAHLAALQHGSCCHSYALIKGF-TSEITICNALIDMYAKCGRI 478
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
D A +F+ M KRD+ S+ +MI HG +A+ LF+ ML +GL PD+ F +L+AC
Sbjct: 479 DTARNVFDRMHKRDIVSWNAMIIAYGNHGLGMEALLLFDNMLADGLEPDDVTFICLLSAC 538
Query: 225 SHGRLVEE 232
SH LV+E
Sbjct: 539 SHSGLVKE 546
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 169/379 (44%), Gaps = 66/379 (17%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLV---------------KGGDLI--NARKVFDDMPE 43
D+A+ VF MP R++ +WN+M+ G DL+ N+ + +P
Sbjct: 170 DDAEMVFSGMPYRDVVAWNSMIAGFSLHRVCYNETIQLLAQMQKDLVRPNSSTIVAVLPA 229
Query: 44 -----------------------RDVVSFTVMIDGYAKVGDIASARALFDK-APKRDAFL 79
DVV T ++D Y K I AR FD + R+
Sbjct: 230 VAQANALSHGKALHGFCVRRGYIDDVVVATGLLDMYGKCQCIIYARNFFDMMSIVRNEVT 289
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVK------PDEYIMVSLMSACSQVGNLDLAKW 133
WS ++ Y L EAL +FQ M M +K P E + +++ AC+++ ++ +
Sbjct: 290 WSAMLGAYVMCELMREALDLFQYM--MRIKDAAVKSPTEVTLATVLRACAELTDVSRGRC 347
Query: 134 VDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHG 193
+ CY +S I + L+ AKCG + A + F EM +D SY ++I G +G
Sbjct: 348 IHCYTIKSGF-ISDLMLGNTLLSTYAKCGTVSDAIRYFHEMELKDEVSYSAIISGCMQNG 406
Query: 194 YAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--HYFETMKSKYSMVPSPE 251
A++A+ +F++M G+ P+ A IL AC+H ++ G H + +K S +
Sbjct: 407 NAKEALSMFHRMRLSGMDPELATMVGILPACAHLAALQHGSCCHSYALIKGFTSEITICN 466
Query: 252 HYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE- 310
++D+ ++ G++ A + M S W A++ A YG LG + A LF+
Sbjct: 467 ---ALIDMYAKCGRIDTARNVFDRMHKRDIVS-WNAMIIA---YGNHGLG-MEALLLFDN 518
Query: 311 -----LEPENSSPYVLLSS 324
LEP++ + LLS+
Sbjct: 519 MLADGLEPDDVTFICLLSA 537
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 129/272 (47%), Gaps = 13/272 (4%)
Query: 29 GDLINARKVFDDMPERDVVSFTVMIDG----YAKVGDIASARALFDKAPKR--DAFLWSV 82
G LI+ + + + + F ++I+ Y + AR LFDK+P+R +W++
Sbjct: 29 GKLIHQNLLKHHIAKNNDTHFRLVIEKLMHLYLVCNEDQYARHLFDKSPQRPRKVVIWNM 88
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
LI YA NG EA+ ++ M + ++P +Y ++ ACS + ++ K + + +
Sbjct: 89 LIRAYAWNGPFTEAINLYYKMLELGIQPSKYTYPFVLKACSALQAIEEGKEIHIHAKRLD 148
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYA-EQAVGL 201
+D +V A++DM AKCG +D A +F MP RD+ ++ SMI G S+H + + L
Sbjct: 149 LD-SDVYVSTAVVDMYAKCGCLDDAEMVFSGMPYRDVVAWNSMIAGFSLHRVCYNETIQL 207
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDL 259
+M + + P+++ +L A + + GK H F + V ++D+
Sbjct: 208 LAQMQKDLVRPNSSTIVAVLPAVAQANALSHGKALHGFCVRRGYIDDVVVATG---LLDM 264
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
+ + A M + + W A+LGA
Sbjct: 265 YGKCQCIIYARNFFDMMSIVRNEVTWSAMLGA 296
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 125/282 (44%), Gaps = 15/282 (5%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLP-NEALKIFQ 101
+ DV T ++D YAK G + A +F P RD W+ +I+G++ + + NE +++
Sbjct: 150 DSDVYVSTAVVDMYAKCGCLDDAEMVFSGMPYRDVVAWNSMIAGFSLHRVCYNETIQLLA 209
Query: 102 GMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC 161
M+ V+P+ +V+++ A +Q L K + + + I V L+DM KC
Sbjct: 210 QMQKDLVRPNSSTIVAVLPAVAQANALSHGKALHGFCVRRGY-IDDVVVATGLLDMYGKC 268
Query: 162 GNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLN--EGLI--PDNAA 216
+ A F+ M R+ ++ +M+ + +A+ LF M+ + + P
Sbjct: 269 QCIIYARNFFDMMSIVRNEVTWSAMLGAYVMCELMREALDLFQYMMRIKDAAVKSPTEVT 328
Query: 217 FTVILTACSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLK 274
+L AC+ V G+ H + T+KS + + ++ ++ G + +A
Sbjct: 329 LATVLRACAELTDVSRGRCIHCY-TIKSGF--ISDLMLGNTLLSTYAKCGTVSDAIRYFH 385
Query: 275 SMPVESHASAWGALLGACKFYGEVE--LGEIVANRLFELEPE 314
M ++ S + A++ C G + L RL ++PE
Sbjct: 386 EMELKDEVS-YSAIISGCMQNGNAKEALSMFHRMRLSGMDPE 426
>30098.m001706 pentatricopeptide repeat-containing protein, putative
Length = 758
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 12/224 (5%)
Query: 19 NAMVGGLV-----KGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP 73
N VGG + K D + A+ VF+++ ERD ++ V+I YA+ R L K
Sbjct: 317 NTFVGGALIEMYSKCQDPMAAQLVFNEVIERDAPTWNVLISCYARCNQNEEIRNLLQKM- 375
Query: 74 KRDAF-----LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNL 128
+ D F W+ +++GY +NG + A+++F M +V+PD + + ++ ACS++ L
Sbjct: 376 QEDGFEPNIYTWNGILAGYVENGHLDLAMQLFSEMHTGDVRPDIFTVGIILPACSKLATL 435
Query: 129 DLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQG 188
+ K V + + D H+ A L+DM AKCG++ A + + +L + M+
Sbjct: 436 ERGKQVHAHSIRCYYD-SDVHIGAGLVDMYAKCGSLQYAQLAYSRISNHNLVCHNVMLTA 494
Query: 189 LSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEE 232
++HGY E+ + LF + G PDN F +L +C H LVE
Sbjct: 495 YAMHGYGEEGIALFRTIRATGFQPDNVTFLSVLASCVHAGLVEH 538
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 163/355 (45%), Gaps = 52/355 (14%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK----APK 74
+AMV + + GD+ NA K+F R+ VS+ MI GY +GD++ A+ FD+ K
Sbjct: 188 HAMV--MKRCGDMDNAVKIFSRFSLRNEVSYNTMIVGYCAIGDVSKAKEFFDQMEVSGVK 245
Query: 75 RDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV 134
R+ W+ +ISGY N + +EAL +F+ + ++PD + + S+++AC+ +L K +
Sbjct: 246 RERISWNSMISGYVDNFMFDEALNMFRNLLKEGIEPDSFTLGSVLTACADTASLRQGKEI 305
Query: 135 DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRD---------------- 178
Y S+ T V ALI+M +KC + A +F E+ +RD
Sbjct: 306 HSYAIVKSLQ-SNTFVGGALIEMYSKCQDPMAAQLVFNEVIERDAPTWNVLISCYARCNQ 364
Query: 179 -------------------LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTV 219
++++ ++ G +G+ + A+ LF++M + PD +
Sbjct: 365 NEEIRNLLQKMQEDGFEPNIYTWNGILAGYVENGHLDLAMQLFSEMHTGDVRPDIFTVGI 424
Query: 220 ILTACSHGRLVEEGKH-YFETMKSKYSMVPSPEHY-ACMVDLLSRSGQLKE---AYELLK 274
IL ACS +E GK + +++ Y S H A +VD+ ++ G L+ AY +
Sbjct: 425 ILPACSKLATLERGKQVHAHSIRCYYD---SDVHIGAGLVDMYAKCGSLQYAQLAYSRIS 481
Query: 275 SMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAA 329
+ + H A A YGE + R +P+N + +L+S A
Sbjct: 482 NHNLVCHNVMLTAY--AMHGYGEEGIALFRTIRATGFQPDNVTFLSVLASCVHAG 534
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 139/310 (44%), Gaps = 26/310 (8%)
Query: 29 GDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYA 88
G ++A + D V T ++ YAK G + A LFD P R+ W +++ Y
Sbjct: 83 GTQVHAHAIKTGFHCHDFVQ-TKLLQMYAKFGCLECAHLLFDSVPLRNLHSWLAILNVYF 141
Query: 89 QNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQT 148
+GL +EA +FQ + +++ + + + CS +G ++L + + + + D+
Sbjct: 142 DHGLFDEAFSLFQELLFEDIELEFFAFPLVFKICSGLGMVELGRQLHAMVMKRCGDMDNA 201
Query: 149 HVVAALIDMNAKC------------GNMDRANKLFEEMP----KRDLFSYCSMIQGLSIH 192
+ + + + G++ +A + F++M KR+ S+ SMI G +
Sbjct: 202 VKIFSRFSLRNEVSYNTMIVGYCAIGDVSKAKEFFDQMEVSGVKRERISWNSMISGYVDN 261
Query: 193 GYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--HYFETMKSKYSMVPSP 250
++A+ +F +L EG+ PD+ +LTAC+ + +GK H + +KS S
Sbjct: 262 FMFDEALNMFRNLLKEGIEPDSFTLGSVLTACADTASLRQGKEIHSYAIVKSLQSNTFVG 321
Query: 251 EHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE 310
++++ S+ Q A +L+ + +E A W L+ Y E + N L +
Sbjct: 322 ---GALIEMYSKC-QDPMAAQLVFNEVIERDAPTWNVLISC---YARCNQNEEIRNLLQK 374
Query: 311 LEPENSSPYV 320
++ + P +
Sbjct: 375 MQEDGFEPNI 384
>29739.m003641 pentatricopeptide repeat-containing protein, putative
Length = 1439
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 128/281 (45%), Gaps = 40/281 (14%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER------------------ 44
A+ +F + +L +WNAM+ G + GD K+F M E+
Sbjct: 1144 AEFIFENKNKFDLAAWNAMMFGYIICGDHDKGLKLFAFMHEKGESCDEYTLATAAKACGS 1203
Query: 45 ---------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
D+ + ++D Y K G++ LFD P D W+++
Sbjct: 1204 LVRLEQGKQIHALAIKFGLNSDLFLSSGILDMYIKCGNMEDGHLLFDNIPVPDDVAWTIM 1263
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
ISG +NG + AL +++ M L + PDEY +L+ A S + L+ + + + +
Sbjct: 1264 ISGCVENGDEDRALSVYRQMRLSGILPDEYTFATLIKASSCLTALEQGRQIHANVIKLEC 1323
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
V +LIDM AKCG ++ A LF M R++ + +M+ L+ HG+ E+A+ LF
Sbjct: 1324 -ASDPFVGTSLIDMYAKCGIIEDAYCLFRRMDVRNIVVWNAMLVSLAQHGHGEEALHLFK 1382
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKY 244
M + + PD F +L+ACSH V E +F +M Y
Sbjct: 1383 VMQSHSIKPDKVTFIGVLSACSHSGHVSEAYGHFHSMHKDY 1423
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 137/273 (50%), Gaps = 11/273 (4%)
Query: 21 MVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLW 80
M+G L+ G L + FD + V +I+ Y+K+G ++ A +F + D W
Sbjct: 1005 MLGKLIHGMTL---KSGFDSV----VSVANSLINMYSKMGFVSLAHTVFTGMNELDLISW 1057
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVG-NLDLAKWVDCYLS 139
+ +IS YAQNGL E++ + G+ ++PD + + S++ ACS + L L+K + Y++
Sbjct: 1058 NSMISCYAQNGLQKESVNLLVGLLRDGLQPDHFTLASVLKACSSLTEGLFLSKQIHVYVT 1117
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAV 199
++SI I + V ALID+ ++ G M A +FE K DL ++ +M+ G I G ++ +
Sbjct: 1118 KTSI-IAENFVSTALIDVYSRSGLMAEAEFIFENKNKFDLAAWNAMMFGYIICGDHDKGL 1176
Query: 200 GLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDL 259
LF M +G D AC +E+GK + K+ + + ++D+
Sbjct: 1177 KLFAFMHEKGESCDEYTLATAAKACGSLVRLEQGKQ-IHALAIKFGLNSDLFLSSGILDM 1235
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALLGAC 292
+ G +++ + L ++PV AW ++ C
Sbjct: 1236 YIKCGNMEDGHLLFDNIPVPDDV-AWTIMISGC 1267
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 150/337 (44%), Gaps = 43/337 (12%)
Query: 3 AKRVFVQMPERNLTSWNAMVG----------------GLVKGG----------------- 29
A VF M E +L SWN+M+ GL++ G
Sbjct: 1042 AHTVFTGMNELDLISWNSMISCYAQNGLQKESVNLLVGLLRDGLQPDHFTLASVLKACSS 1101
Query: 30 ---DLINARKVFDDMPERDVVS----FTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
L ++++ + + +++ T +ID Y++ G +A A +F+ K D W+
Sbjct: 1102 LTEGLFLSKQIHVYVTKTSIIAENFVSTALIDVYSRSGLMAEAEFIFENKNKFDLAAWNA 1161
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
++ GY G ++ LK+F M DEY + + AC + L+ K + +
Sbjct: 1162 MMFGYIICGDHDKGLKLFAFMHEKGESCDEYTLATAAKACGSLVRLEQGKQIHALAIKFG 1221
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
++ + + ++DM KCGNM+ + LF+ +P D ++ MI G +G ++A+ ++
Sbjct: 1222 LN-SDLFLSSGILDMYIKCGNMEDGHLLFDNIPVPDDVAWTIMISGCVENGDEDRALSVY 1280
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
+M G++PD F ++ A S +E+G+ + K P ++D+ ++
Sbjct: 1281 RQMRLSGILPDEYTFATLIKASSCLTALEQGRQIHANVI-KLECASDPFVGTSLIDMYAK 1339
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
G +++AY L + M V + W A+L + +G E
Sbjct: 1340 CGIIEDAYCLFRRMDVRN-IVVWNAMLVSLAQHGHGE 1375
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 158/411 (38%), Gaps = 127/411 (30%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGD-----LINARKVFDDMPER------------ 44
+A+++F + P+R+L +WNA++ + + ++ +F + ER
Sbjct: 757 SARQLFDRTPDRDLVTWNAVLSAYARSDESEYDHVVEGFHIFRLLRERFVSTSKLTLAPM 816
Query: 45 ---------------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDA 77
DV +++ Y+K G + AR LFD +RD
Sbjct: 817 LKLCLLSGYVCASQAVHGYAVKIGLELDVFVSGALVNIYSKFGLVREARGLFDIMQERDV 876
Query: 78 FLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVG----------- 126
LW+V++ Y + GL EAL F ++PD+ M ++S S+VG
Sbjct: 877 VLWNVMLKAYVEMGLVKEALSFFSQFHQSGLRPDDASMRCVVSGISEVGYDTGRRYIEQI 936
Query: 127 ------------NLDLAKW----------------VDCY---LSQSSIDIGQTHVVAAL- 154
N D+ W VDC+ L+ S + +V L
Sbjct: 937 QAYATKLFFCDDNTDVVMWNKKLSEYLQAGAFWAAVDCFINMLTSSHVKYDNVTLVVVLA 996
Query: 155 ---------------------------------IDMNAKCGNMDRANKLFEEMPKRDLFS 181
I+M +K G + A+ +F M + DL S
Sbjct: 997 AATGTGDLMLGKLIHGMTLKSGFDSVVSVANSLINMYSKMGFVSLAHTVFTGMNELDLIS 1056
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS---HGRLVEEGKHYFE 238
+ SMI + +G +++V L +L +GL PD+ +L ACS G + + H +
Sbjct: 1057 WNSMISCYAQNGLQKESVNLLVGLLRDGLQPDHFTLASVLKACSSLTEGLFLSKQIHVYV 1116
Query: 239 TMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
T K S++ ++D+ SRSG + EA E + + +AW A++
Sbjct: 1117 T---KTSIIAENFVSTALIDVYSRSGLMAEA-EFIFENKNKFDLAAWNAMM 1163
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 98/196 (50%), Gaps = 7/196 (3%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPN-----EALKIFQGMELM 106
+I Y+K G ++SAR LFD+ P RD W+ ++S YA++ E IF+ +
Sbjct: 745 LITMYSKCGSVSSARQLFDRTPDRDLVTWNAVLSAYARSDESEYDHVVEGFHIFRLLRER 804
Query: 107 NVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDR 166
V + + ++ C G + ++ V Y + +++ V AL+++ +K G +
Sbjct: 805 FVSTSKLTLAPMLKLCLLSGYVCASQAVHGYAVKIGLEL-DVFVSGALVNIYSKFGLVRE 863
Query: 167 ANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH 226
A LF+ M +RD+ + M++ G ++A+ F++ GL PD+A+ +++ S
Sbjct: 864 ARGLFDIMQERDVVLWNVMLKAYVEMGLVKEALSFFSQFHQSGLRPDDASMRCVVSGISE 923
Query: 227 GRLVEEGKHYFETMKS 242
+ G+ Y E +++
Sbjct: 924 VG-YDTGRRYIEQIQA 938
>29801.m003177 pentatricopeptide repeat-containing protein, putative
Length = 379
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 165/366 (45%), Gaps = 55/366 (15%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV--SFTV--------- 51
A+++F +MP R+ SWNAM+ G + G+++ + D+M + V +F V
Sbjct: 11 ARKLFDEMPIRDCGSWNAMISGYCQNGNVVEVLDIVDEMRKDGVAMDAFAVASILPVCAK 70
Query: 52 ----------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
+I YAK G + A+ +FD RD W+ +
Sbjct: 71 LNDVLSGKLIHLLVIKLGLEFDSFVSNALIAMYAKFGSLGLAQKVFDHMVVRDIVSWNSI 130
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I+ Y QN A F M + V+PD ++SL S +Q+ + ++ + ++++
Sbjct: 131 IAAYEQNDDAATARSFFDKMRQIGVRPDLLTVLSLASIVAQLNDHQNSRSIHGFVTRRGW 190
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+ T + A++DM AK G + A +FE +P +D+ S+ ++I G + +G A +A+ ++N
Sbjct: 191 FMKDTVIGNAVVDMYAKLGATESARAVFERLPVKDVISWNTLITGYAQNGLASEAIEVYN 250
Query: 204 KMLN-EGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHY-----ACMV 257
M + + P + IL A SH + +G M++ ++ + H C++
Sbjct: 251 MMEECKEVSPTQGTWVSILPAYSHLGALHQG------MRTHGHVIKNSLHLDVFVGTCLI 304
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSS 317
D+ + G+L +A L +P A W A++ +G GE V E+ +
Sbjct: 305 DMYGKCGKLDDAMSLFYEVP-RKDAVPWNAIISCHAVHGH---GEKVIKLFREMIDDGVK 360
Query: 318 PYVLLS 323
P L++
Sbjct: 361 PDQLVA 366
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 116/241 (48%), Gaps = 16/241 (6%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
YAK G + AR LFD+ P RD W+ +ISGY QNG E L I M V D + +
Sbjct: 2 YAKFGLVGEARKLFDEMPIRDCGSWNAMISGYCQNGNVVEVLDIVDEMRKDGVAMDAFAV 61
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
S++ C+++ ++ K + + + ++ + V ALI M AK G++ A K+F+ M
Sbjct: 62 ASILPVCAKLNDVLSGKLIHLLVIKLGLEF-DSFVSNALIAMYAKFGSLGLAQKVFDHMV 120
Query: 176 KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
RD+ S+ S+I + A A F+KM G+ PD +LT S +V +
Sbjct: 121 VRDIVSWNSIIAAYEQNDDAATARSFFDKMRQIGVRPD------LLTVLSLASIVAQLND 174
Query: 236 YFETMKSKYSMVPSPEHYA-------CMVDLLSRSGQLKEAYELLKSMPVESHASAWGAL 288
+ + +S + V + +VD+ ++ G + A + + +PV+ S W L
Sbjct: 175 H-QNSRSIHGFVTRRGWFMKDTVIGNAVVDMYAKLGATESARAVFERLPVKDVIS-WNTL 232
Query: 289 L 289
+
Sbjct: 233 I 233
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 40/160 (25%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE----------------- 43
++A+ VF ++P +++ SWN ++ G + G A +V++ M E
Sbjct: 212 ESARAVFERLPVKDVISWNTLITGYAQNGLASEAIEVYNMMEECKEVSPTQGTWVSILPA 271
Query: 44 -----------------------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLW 80
DV T +ID Y K G + A +LF + P++DA W
Sbjct: 272 YSHLGALHQGMRTHGHVIKNSLHLDVFVGTCLIDMYGKCGKLDDAMSLFYEVPRKDAVPW 331
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
+ +IS +A +G + +K+F+ M VKPD+ + + + S
Sbjct: 332 NAIISCHAVHGHGEKVIKLFREMIDDGVKPDQLVAIQVWS 371
>29981.m000602 pentatricopeptide repeat-containing protein, putative
Length = 393
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 118/249 (47%), Gaps = 40/249 (16%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGG-------------------DLINARKVFDDM 41
D+ ++VF MP+R+L SWN ++ G G D V
Sbjct: 138 DSVRKVFEMMPKRDLVSWNTVIAGNAHNGMHEEALVMVREMGNVNLKPDSFTLSSVLPIF 197
Query: 42 PER--------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
E DV + +ID YAK + + +F P+RD W+
Sbjct: 198 AEYVNVDKGKEIHGYAIRHGLDGDVFIGSSLIDMYAKCTRVEDSLRVFSLLPRRDDISWN 257
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I+G QN L +E L+ F+ M NVKP + S++ AC+ + L+L + + Y+ +
Sbjct: 258 SIIAGCVQNSLFDEGLRFFRQMLKANVKPRQVSFSSILPACAHLTTLNLGRQLHGYILRV 317
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
D + ++L+DM AKCGN+ A +F++M + D+ S+ +MI G ++HG+A A+ L
Sbjct: 318 RFD-NNVFIASSLVDMYAKCGNVKVARWIFDKMKQHDMVSWTAMIMGYALHGHARDAISL 376
Query: 202 FNKMLNEGL 210
F +M G+
Sbjct: 377 FEQMEMRGM 385
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 136/271 (50%), Gaps = 22/271 (8%)
Query: 42 PERDVVSFTVMIDGY------------AKVGDIASARALFDKAPKRDAFLWSVLISGYAQ 89
P+R V S + ++GY + D+ S R +F+ PKRD W+ +I+G A
Sbjct: 106 PDRKV-SPQISVNGYITDQSYKASHNICRTSDVDSVRKVFEMMPKRDLVSWNTVIAGNAH 164
Query: 90 NGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTH 149
NG+ EAL + + M +N+KPD + + S++ ++ N+D K + Y + +D G
Sbjct: 165 NGMHEEALVMVREMGNVNLKPDSFTLSSVLPIFAEYVNVDKGKEIHGYAIRHGLD-GDVF 223
Query: 150 VVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEG 209
+ ++LIDM AKC ++ + ++F +P+RD S+ S+I G + ++ + F +ML
Sbjct: 224 IGSSLIDMYAKCTRVEDSLRVFSLLPRRDDISWNSIIAGCVQNSLFDEGLRFFRQMLKAN 283
Query: 210 LIPDNAAFTVILTACSHGRLVEEGKH---YFETMKSKYSMVPSPEHYACMVDLLSRSGQL 266
+ P +F+ IL AC+H + G+ Y ++ ++ + + +VD+ ++ G +
Sbjct: 284 VKPRQVSFSSILPACAHLTTLNLGRQLHGYILRVRFDNNVFIA----SSLVDMYAKCGNV 339
Query: 267 KEAYELLKSMPVESHASAWGALLGACKFYGE 297
K A + M S W A++ +G
Sbjct: 340 KVARWIFDKMKQHDMVS-WTAMIMGYALHGH 369
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 39/148 (26%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTV----- 51
+++ RVF +P R+ SWN+++ G V+ + F M + +V VSF+
Sbjct: 239 EDSLRVFSLLPRRDDISWNSIIAGCVQNSLFDEGLRFFRQMLKANVKPRQVSFSSILPAC 298
Query: 52 ------------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWS 81
++D YAK G++ AR +FDK + D W+
Sbjct: 299 AHLTTLNLGRQLHGYILRVRFDNNVFIASSLVDMYAKCGNVKVARWIFDKMKQHDMVSWT 358
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVK 109
+I GYA +G +A+ +F+ ME+ +K
Sbjct: 359 AMIMGYALHGHARDAISLFEQMEMRGMK 386
>30128.m008934 pentatricopeptide repeat-containing protein, putative
Length = 387
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 124/267 (46%), Gaps = 41/267 (15%)
Query: 6 VFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM----PERDVVSFTV---------- 51
VF + +N SW ++ G GD ++F M E + SF++
Sbjct: 118 VFCGIEVKNAVSWTTLIAGYTHKGDGHLGLQIFRQMLLEEEECNPYSFSIAVRACASIGS 177
Query: 52 -------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
++D Y + G + A F + +RD W+ +I+G
Sbjct: 178 HNFGKQIHAAVIKHGCEFSLPVMNSILDMYCRCGRLPEANQYFHEMTRRDLITWNTIIAG 237
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG 146
Y ++ EAL IF M+L PD S+ +AC+ + L + V + Q +D
Sbjct: 238 YERSD-SIEALFIFSEMKLNGFDPDCNTFTSVTAACANLAVLSCGQQVHGGIIQKGLD-K 295
Query: 147 QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
+ ALIDM AKCG + + K+F E+ ++L S+ SM+ G HG+ + V LF++M+
Sbjct: 296 DLILANALIDMYAKCGIITDSRKIFSELSCKNLVSWTSMMIGYGAHGFGREVVELFDEMV 355
Query: 207 NEGLIPDNAAFTVILTACSHGRLVEEG 233
G+ PD+ AF +L+ACSH LV++G
Sbjct: 356 ESGIKPDHIAFMAVLSACSHAGLVDQG 382
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 53/282 (18%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM--PERDVVSFTV--------- 51
A+ VF +M ER++ +W M+ G + A +F DM E + +FT+
Sbjct: 13 ARNVFDEMLERDVVAWTVMIAGYASCNEHAYAWSMFCDMVASEMNPNAFTISSVLKACKG 72
Query: 52 --------MIDGYAKV----GDIASARALFDKAPK-----------------RDAFLWSV 82
++ G+A G I AL D ++A W+
Sbjct: 73 MKSLSCGTLVHGFAIKHGIEGSIFVDNALMDAYATCCVSMREACLVFCGIEVKNAVSWTT 132
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
LI+GY G + L+IF+ M L + + Y + AC+ +G+ + K + + +
Sbjct: 133 LIAGYTHKGDGHLGLQIFRQMLLEEEECNPYSFSIAVRACASIGSHNFGKQIHAAVIKHG 192
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ V+ +++DM +CG + AN+ F EM +RDL ++ ++I G E A+ +F
Sbjct: 193 CEFSLP-VMNSILDMYCRCGRLPEANQYFHEMTRRDLITWNTIIAGYERSDSIE-ALFIF 250
Query: 203 NKMLNEGLIPDNAAFTVILTACS-----------HGRLVEEG 233
++M G PD FT + AC+ HG ++++G
Sbjct: 251 SEMKLNGFDPDCNTFTSVTAACANLAVLSCGQQVHGGIIQKG 292
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 101/223 (45%), Gaps = 3/223 (1%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
Y + G + AR +FD+ +RD W+V+I+GYA A +F M + P+ + +
Sbjct: 4 YFEKGLVREARNVFDEMLERDVVAWTVMIAGYASCNEHAYAWSMFCDMVASEMNPNAFTI 63
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG-NMDRANKLFEEM 174
S++ AC + +L V + + I+ G V AL+D A C +M A +F +
Sbjct: 64 SSVLKACKGMKSLSCGTLVHGFAIKHGIE-GSIFVDNALMDAYATCCVSMREACLVFCGI 122
Query: 175 PKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK 234
++ S+ ++I G + G + +F +ML E + +F++ + AC+ GK
Sbjct: 123 EVKNAVSWTTLIAGYTHKGDGHLGLQIFRQMLLEEEECNPYSFSIAVRACASIGSHNFGK 182
Query: 235 HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP 277
+ P + ++D+ R G+L EA + M
Sbjct: 183 QIHAAVIKHGCEFSLPVMNS-ILDMYCRCGRLPEANQYFHEMT 224
>28196.m000208 pentatricopeptide repeat-containing protein, putative
Length = 404
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 144/327 (44%), Gaps = 94/327 (28%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGD 61
+A+ VF +MP + SWN ++ G K G L VFD++P+RD VS+T+MI GY ++G
Sbjct: 16 DARSVFDEMPVKTTFSWNTILTGYAKLGKLAKTHSVFDEIPDRDSVSWTIMIMGYNQMGR 75
Query: 62 IASARALF-----DKAPKRDAFLWSVLIS---------GYAQNGLPNEALKIFQGMELMN 107
SA +F DK + +V S GY Q+G EAL++F M +
Sbjct: 76 FESAIKMFVAMVKDKVLPTQLTITNVFASCAALGALDIGYNQHGFDKEALELFSRMLEDS 135
Query: 108 VKPDEYIMVSLMSACSQVGN----------LDL------------AKWVDCYLSQSSID- 144
+KPD + + S++SAC+ +G D+ AK ++QS ++
Sbjct: 136 LKPDRFTLASVLSACANLGKQIHSYIIRTEFDISGVVQNALISMCAKTGGVEIAQSVVEQ 195
Query: 145 --IGQTHVVA--ALIDMNAKCGNMDRANKLFEEMPKR----------------------- 177
I +V+A AL+D K GN+ A +F+ + R
Sbjct: 196 SGISDLNVIAFTALLDGYVKLGNITPARHIFDSLKDRDMVVWTAMMFYTSSHVECQFKCG 255
Query: 178 ------------------------------DLFSYCSMIQGLSIHGYAEQAVGLFNKMLN 207
D S+ SMI L+ HG ++++ LF KML
Sbjct: 256 FFESWQTNSCKCHKIRGKFISFGGQCTDYDDTVSWTSMIIALAQHGLGQESIELFEKMLA 315
Query: 208 EGLIPDNAAFTVILTACSHGRLVEEGK 234
G+ PD+ + +L+AC+H LVE+G+
Sbjct: 316 LGIKPDHITYVGVLSACTHVGLVEQGR 342
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 159 AKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFT 218
AK G + + + +F+E+P RD S+ MI G + G E A+ +F M+ + ++P T
Sbjct: 40 AKLGKLAKTHSVFDEIPDRDSVSWTIMIMGYNQMGRFESAIKMFVAMVKDKVLPTQLTIT 99
Query: 219 VILTACSHGRLVEEG--KHYF--ETMKSKYSMVP---SPEHYACMVDLLSRSGQL-KEAY 270
+ +C+ ++ G +H F E ++ M+ P+ + + +LS L K+ +
Sbjct: 100 NVFASCAALGALDIGYNQHGFDKEALELFSRMLEDSLKPDRFT-LASVLSACANLGKQIH 158
Query: 271 ELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAAD 330
+ + AL+ C G VE+ + V + + N + L Y
Sbjct: 159 SYIIRTEFDISGVVQNALISMCAKTGGVEIAQSVVEQS-GISDLNVIAFTALLDGYVKLG 217
Query: 331 QWLDVSHVKNKMKERGL 347
H+ + +K+R +
Sbjct: 218 NITPARHIFDSLKDRDM 234
>30147.m014417 pentatricopeptide repeat-containing protein, putative
Length = 1151
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 163/325 (50%), Gaps = 60/325 (18%)
Query: 3 AKRVFVQMPERNLT----SWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMID 54
A VF ++ ++ L ++ +++ L K GDL A ++ DDM ++ ++V++ +I+
Sbjct: 636 AMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALIN 695
Query: 55 GYAKVGDIASARALFDKAPK----RDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKP 110
G K+G+IA AR LFD P+ R++ +S +I+GY ++ EA ++F GM+L+ V P
Sbjct: 696 GLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPP 755
Query: 111 DEYIMVSLMSACSQVGNLD-----------------------------LAKWVDCY-LSQ 140
D ++ +L+ C + GN + L K ++ Y L +
Sbjct: 756 DSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVE 815
Query: 141 SSID--IGQTHVV-AALIDMNAKCGNMDRANKLFEEMPKR----DLFSYCSMIQGLSIHG 193
+D I HV LI+ + GN+ A +LF EM KR ++ +Y S++ G + G
Sbjct: 816 DMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIG 875
Query: 194 YAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEH- 252
+ LF++M+ G+ PD+ A++V++ A H ++EG ++ + +K M+ +
Sbjct: 876 RRSEMFSLFDEMVARGIKPDDLAWSVMVDA--H---LKEG-NWIKALKLVDDMLSEGVNV 929
Query: 253 ----YACMVDLLSRSGQLKEAYELL 273
Y ++D L + L E ++L
Sbjct: 930 CKNLYTILIDALCKHNNLSEVLKVL 954
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 138/296 (46%), Gaps = 24/296 (8%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKG----GDLINARKVFDDMP----ERDVVSFTVM 52
+ A + +++ + NLT+ M G +V G GDL A ++F +M + ++V +T +
Sbjct: 424 EKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTI 483
Query: 53 IDGYAKVGDIASARALF----DKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
+ G K G A + D+ D F ++ +I G+ + G E M +
Sbjct: 484 VKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGL 543
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
KP+ Y + + + G + A+ + S I + LID K GN +A
Sbjct: 544 KPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDV-ICTDLIDGYCKDGNTTKAF 602
Query: 169 KLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT-A 223
F M + D+ ++ +I GLS +G ++A+G+F+++L++GL+PD +T +++
Sbjct: 603 AKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNL 662
Query: 224 CSHGRLVEEGKHYFETMKS--KYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP 277
C G L K FE K + P+ Y +++ L + G++ +A EL +P
Sbjct: 663 CKEGDL----KAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIP 714
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 130/284 (45%), Gaps = 35/284 (12%)
Query: 15 LTSWNAMVGGLVKGGDLINARKVFDDMPER---DVVSFTVMIDGYAKVGDIASAR-ALFD 70
L N++ L+KG + KV+ M DV ++T +I+ Y +VG + + LFD
Sbjct: 198 LACCNSLSKDLLKGNRVELFWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFD 257
Query: 71 KAPKR---DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSA-CSQVG 126
K + +SV+I+G + G +EAL++ + M + PD YI +L+ C Q
Sbjct: 258 MEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKR 317
Query: 127 NLDLAKWVDCYLSQSSIDIGQTHVV-AALIDMNAKCGNMDRANKLFEEMPKRDL----FS 181
+ + +D ++ + HV ALI+ K ++ A ++ EEM R + F+
Sbjct: 318 STEGKSMLD---EMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFT 374
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
Y ++I GL G E+A LF++M G+ PD + ++ EG + + M+
Sbjct: 375 YYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLI----------EGYYKVQNME 424
Query: 242 SKYSMVP-------SPEHYAC--MVDLLSRSGQLKEAYELLKSM 276
Y ++ + Y C +V+ L G L A EL + M
Sbjct: 425 KAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEM 468
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 139/320 (43%), Gaps = 44/320 (13%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGD 61
N++ VF Q NL++++ + L G NA V + M + + + K+ D
Sbjct: 98 NSRTVFSQ----NLSTFSILSLILCNSGLFGNAANVLERMIDTR--------NPHVKILD 145
Query: 62 --IASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLM 119
I + + + ++ +LI Y + G NEA+ +F G K +E+I V L
Sbjct: 146 SIIKCYKEINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLG-----AKTNEFI-VGL- 198
Query: 120 SACSQVGNLDLAK-------WVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFE 172
AC + DL K W Y + + LI+ + G ++ +
Sbjct: 199 -ACCNSLSKDLLKGNRVELFW-KVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLF 256
Query: 173 EMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGR 228
+M ++ +L +Y +I GL G ++A+ L M N+GL+PDN + ++ +
Sbjct: 257 DMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQK 316
Query: 229 LVEEGKHYFETMKSKYSMVPSPEH--YACMVDLLSRSGQLKEAYELLKSM---PVESHAS 283
EGK + M Y+M P+H Y +++ + + A+++ + M ++ +
Sbjct: 317 RSTEGKSMLDEM---YTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTF 373
Query: 284 AWGALL-GACKFYGEVELGE 302
+ AL+ G CK G++E E
Sbjct: 374 TYYALIHGLCKI-GDLEKAE 392
>30128.m008587 pentatricopeptide repeat-containing protein, putative
Length = 686
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 109/200 (54%), Gaps = 2/200 (1%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
E D++ ++ Y I ARA F + P +D W+ +I+GY + G NEALK+F+
Sbjct: 230 EFDILVSNSLLKMYVDCHCIEDARATFHQMPTKDIISWTEIINGYVKIGEFNEALKLFRQ 289
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
M + ++PD + +++ AC++ L + + YL ++ I++ + ALIDM K G
Sbjct: 290 MNIAGIRPDSLSLSTILPACARPAAHKLGREIHAYLLRNGIELNLM-LQNALIDMYVKSG 348
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIP-DNAAFTVIL 221
M+ A+ +F M ++D+ S+ MI G S+HG E V LF ++ + I D + +L
Sbjct: 349 FMESASLIFVRMKEKDVISWTVMILGFSLHGQGELGVELFRRLEKDPSIEIDQYIYAAVL 408
Query: 222 TACSHGRLVEEGKHYFETMK 241
C+ +VEEGK YF +K
Sbjct: 409 RCCTTACMVEEGKLYFGCIK 428
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 121/267 (45%), Gaps = 9/267 (3%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D + +ID Y + +AR+LFD +P +++ W+VL Y P+ L +F M
Sbjct: 131 DPYVISSLIDFYGHLDSTDAARSLFDNSPSKNSVSWTVLARLYLMQNKPDVVLSLFYQML 190
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
N D + + + AC + ++ K + + + ++ V +L+ M C +
Sbjct: 191 DFNSLFDPVALATALRACGMLRSMHHGKILHGFAKKCRLEF-DILVSNSLLKMYVDCHCI 249
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
+ A F +MP +D+ S+ +I G G +A+ LF +M G+ PD+ + + IL AC
Sbjct: 250 EDARATFHQMPTKDIISWTEIINGYVKIGEFNEALKLFRQMNIAGIRPDSLSLSTILPAC 309
Query: 225 SH---GRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESH 281
+ +L E Y + +++ ++D+ +SG ++ A + M E
Sbjct: 310 ARPAAHKLGREIHAYLLRNGIELNLMLQ----NALIDMYVKSGFMESASLIFVRMK-EKD 364
Query: 282 ASAWGALLGACKFYGEVELGEIVANRL 308
+W ++ +G+ ELG + RL
Sbjct: 365 VISWTVMILGFSLHGQGELGVELFRRL 391
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 1/166 (0%)
Query: 69 FDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNL 128
D+ P D F W+ LI + N P AL I+ M L PD +++A NL
Sbjct: 54 LDEIPLSDTFAWNNLIHSHLTNRDPFSALSIYLHMLLRGALPDRRTFPRVLNASRLSTNL 113
Query: 129 DLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQG 188
L K + + +V+++LID + D A LF+ P ++ S+ + +
Sbjct: 114 FLGKQIHAQALKFGFS-SDPYVISSLIDFYGHLDSTDAARSLFDNSPSKNSVSWTVLARL 172
Query: 189 LSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK 234
+ + + LF +ML+ + D A L AC R + GK
Sbjct: 173 YLMQNKPDVVLSLFYQMLDFNSLFDPVALATALRACGMLRSMHHGK 218
>30055.m001535 pentatricopeptide repeat-containing protein, putative
Length = 661
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 132/269 (49%), Gaps = 38/269 (14%)
Query: 1 DNAKRVFVQMPE-RNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSF------ 49
D+A ++F M RN+ SW A++ G ++ G A +F +M V +F
Sbjct: 351 DDAFKIFSMMYGIRNVVSWTAIISGHLQNGLAEQAVNLFCEMSREGVRPNDYTFSTILAA 410
Query: 50 -------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLI 84
T ++D Y K+G++ A +F++ +D WS ++
Sbjct: 411 QPVVSPFEVHAQVIKSDYEKSPSVGTALLDAYVKLGNLNEASKVFERIDDKDIVAWSAMV 470
Query: 85 SGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ-VGNLDLAKWVDCYLSQSSI 143
+GYAQ G A+KI M V+P+EY S+++AC+ ++ K + +S
Sbjct: 471 AGYAQTGDTEGAVKILIQMAKKGVEPNEYTFSSVINACTAPTAAVEQGKQFHAWSIKSRF 530
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+ V +AL+ M AK G ++ AN++F RDL S+ SM+ G + HG+A +A+ +F
Sbjct: 531 NDALC-VSSALVTMYAKRGEIESANEVFRRQGVRDLVSWNSMVSGYAQHGHARKALEVFK 589
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEE 232
+M ++ L D F +++AC+H LV+E
Sbjct: 590 EMQDQNLELDGVTFIGVISACTHAGLVDE 618
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 155/340 (45%), Gaps = 48/340 (14%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP------------------ 42
+ KRVF +M ERN+ SW +++ G G + A + F +M
Sbjct: 148 EEGKRVFDEMEERNVVSWTSLLVGYAHNGLNMEALECFFEMQAGAIKPNPFTFATVLGAL 207
Query: 43 ----------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLW 80
E + +I+ Y+K G + +A+A+FD RDA W
Sbjct: 208 ADSKAIADKGVQIHTMVIKNGFEATIFVCNSLINMYSKSGMVKNAKAVFDNMVTRDAISW 267
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ +++GY NGL EA+++F + L VK +I S++ +C+ + L A+ + + +
Sbjct: 268 NSMVAGYVANGLYLEAIEMFYHLRLAGVKLTNFIFSSVIKSCANIKELGFARQLHGQVLK 327
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK-RDLFSYCSMIQGLSIHGYAEQAV 199
+ A ++ N K +D A K+F M R++ S+ ++I G +G AEQAV
Sbjct: 328 GGFEYDHNIRTALMVAYN-KGREIDDAFKIFSMMYGIRNVVSWTAIISGHLQNGLAEQAV 386
Query: 200 GLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDL 259
LF +M EG+ P++ F+ IL A +V + + + +KS Y SP ++D
Sbjct: 387 NLFCEMSREGVRPNDYTFSTILAA---QPVVSPFEVHAQVIKSDYE--KSPSVGTALLDA 441
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
+ G L EA ++ + + + AW A++ G+ E
Sbjct: 442 YVKLGNLNEASKVFERID-DKDIVAWSAMVAGYAQTGDTE 480
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 155/338 (45%), Gaps = 50/338 (14%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDGYA 57
NAK VF M R+ SWN+MV G V G + A ++F + V F+ +I A
Sbjct: 251 NAKAVFDNMVTRDAISWNSMVAGYVANGLYLEAIEMFYHLRLAGVKLTNFIFSSVIKSCA 310
Query: 58 KVGDIASARALFDKAPK------------------------------------RDAFLWS 81
+ ++ AR L + K R+ W+
Sbjct: 311 NIKELGFARQLHGQVLKGGFEYDHNIRTALMVAYNKGREIDDAFKIFSMMYGIRNVVSWT 370
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+ISG+ QNGL +A+ +F M V+P++Y ++++A V ++ V +
Sbjct: 371 AIISGHLQNGLAEQAVNLFCEMSREGVRPNDYTFSTILAAQPVVSPFEVHAQVIKSDYEK 430
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
S +G AL+D K GN++ A+K+FE + +D+ ++ +M+ G + G E AV +
Sbjct: 431 SPSVG-----TALLDAYVKLGNLNEASKVFERIDDKDIVAWSAMVAGYAQTGDTEGAVKI 485
Query: 202 FNKMLNEGLIPDNAAFTVILTACSH-GRLVEEGKHYFE-TMKSKYSMVPSPEHYACMVDL 259
+M +G+ P+ F+ ++ AC+ VE+GK + ++KS+++ + +V +
Sbjct: 486 LIQMAKKGVEPNEYTFSSVINACTAPTAAVEQGKQFHAWSIKSRFNDALCVS--SALVTM 543
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
++ G+++ A E+ + V S W +++ +G
Sbjct: 544 YAKRGEIESANEVFRRQGVRDLVS-WNSMVSGYAQHGH 580
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 135/297 (45%), Gaps = 29/297 (9%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D+ T ++D Y K + + +FD+ +R+ W+ L+ GYA NGL EAL+ F M+
Sbjct: 130 DISVGTSLVDMYMKSEYVEEGKRVFDEMEERNVVSWTSLLVGYAHNGLNMEALECFFEMQ 189
Query: 105 LMNVKPDEYIMVSLMSACSQVGNL-DLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGN 163
+KP+ + +++ A + + D + + ++ + V +LI+M +K G
Sbjct: 190 AGAIKPNPFTFATVLGALADSKAIADKGVQIHTMVIKNGFE-ATIFVCNSLINMYSKSGM 248
Query: 164 MDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
+ A +F+ M RD S+ SM+ G +G +A+ +F + G+ N F+ ++ +
Sbjct: 249 VKNAKAVFDNMVTRDAISWNSMVAGYVANGLYLEAIEMFYHLRLAGVKLTNFIFSSVIKS 308
Query: 224 CS-----------HGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYEL 272
C+ HG++++ G Y +++ A MV ++ ++ +A+++
Sbjct: 309 CANIKELGFARQLHGQVLKGGFEYDHNIRT-----------ALMV-AYNKGREIDDAFKI 356
Query: 273 LKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPY-VLLSSIYAA 328
M + +W A++ G L E N E+ E P S+I AA
Sbjct: 357 FSMMYGIRNVVSWTAIISGHLQNG---LAEQAVNLFCEMSREGVRPNDYTFSTILAA 410
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 109/226 (48%), Gaps = 2/226 (0%)
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
A+ +FD++PK+D + L+ Y++N +E + +F + ++ D + ++ AC+
Sbjct: 49 AQNVFDRSPKQDVVQCNHLLFDYSRNNSHHEVVNLFVAIHRSDLLTDGSTLSCVLKACAC 108
Query: 125 VGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCS 184
+ V Y +S + V +L+DM K ++ ++F+EM +R++ S+ S
Sbjct: 109 LSCKKFGIQVHDYCVKSGF-LEDISVGTSLVDMYMKSEYVEEGKRVFDEMEERNVVSWTS 167
Query: 185 MIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKY 244
++ G + +G +A+ F +M + P+ F +L A + + + + TM K
Sbjct: 168 LLVGYAHNGLNMEALECFFEMQAGAIKPNPFTFATVLGALADSKAIADKGVQIHTMVIKN 227
Query: 245 SMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLG 290
+ ++++ S+SG +K A + +M V A +W +++
Sbjct: 228 GFEATIFVCNSLINMYSKSGMVKNAKAVFDNM-VTRDAISWNSMVA 272
>30068.m002662 GTP-binding protein alpha subunit, gna, putative
Length = 1203
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 128/228 (56%), Gaps = 10/228 (4%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINA--------RKVFDDMPERDVVSFTVM 52
+NA ++ +M E+ + S N L+K + A +F E D+ +
Sbjct: 974 ENALLLYYEMLEKEVQSDNFTYPALIKACAWLRAIDESMQIHGHIFKLGFEEDLYVQNSL 1033
Query: 53 IDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM-ELMNVKPD 111
I+ Y K G I + +F + +D WS +I+ ++ GL +E ++ F+ M + + +P+
Sbjct: 1034 INMYGKCGKIELSCDVFKQIEHKDIASWSSIIAAHSSLGLWSECVQFFEEMIQDRSYRPE 1093
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
E ++VS++SACS +G LDL + + L ++ ++ T V +LIDM CG +++ LF
Sbjct: 1094 ESLLVSVLSACSHLGALDLGRCLHGVLLRNFSELNVT-VQTSLIDMYINCGCIEKGFCLF 1152
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTV 219
+ M K++ FSY MI GL++HG + +A+ +F++ML+EGL PD+ + V
Sbjct: 1153 QRMSKKNHFSYSVMISGLAMHGRSMEALEVFSEMLDEGLQPDDVVYVV 1200
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 128/259 (49%), Gaps = 6/259 (2%)
Query: 60 GDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLM 119
G + A ++F + + +F ++ +I GY + AL ++ M V+ D + +L+
Sbjct: 940 GSMDYACSIFRQIDQPGSFEYNTMIKGYVSDFKMENALLLYYEMLEKEVQSDNFTYPALI 999
Query: 120 SACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDL 179
AC+ + +D + + ++ + + +V +LI+M KCG ++ + +F+++ +D+
Sbjct: 1000 KACAWLRAIDESMQIHGHIFKLGFE-EDLYVQNSLINMYGKCGKIELSCDVFKQIEHKDI 1058
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNE-GLIPDNAAFTVILTACSHGRLVEEGKHYFE 238
S+ S+I S G + V F +M+ + P+ + +L+ACSH ++ G+
Sbjct: 1059 ASWSSIIAAHSSLGLWSECVQFFEEMIQDRSYRPEESLLVSVLSACSHLGALDLGRCLHG 1118
Query: 239 TMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE- 297
+ +S + + ++D+ G +++ + L + M ++H S + ++ +G
Sbjct: 1119 VLLRNFSELNVTVQTS-LIDMYINCGCIEKGFCLFQRMSKKNHFS-YSVMISGLAMHGRS 1176
Query: 298 VELGEIVANRLFE-LEPEN 315
+E E+ + L E L+P++
Sbjct: 1177 MEALEVFSEMLDEGLQPDD 1195
>30169.m006451 pentatricopeptide repeat-containing protein, putative
Length = 474
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 97/179 (54%), Gaps = 2/179 (1%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T + D Y GD +A+ LF+ P RD LW+ +I+ + + EAL F M + +
Sbjct: 289 TSLADMYISCGDETTAKYLFEICPDRDLILWNAMIAAFLKKNKNGEALLFFNRM-ISEEE 347
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA-ALIDMNAKCGNMDRAN 168
P+ +++++S CS + NL + + Y ++ I +A A I M A+CG+M A
Sbjct: 348 PNSVTIINVLSTCSDLANLPYGQCLHAYAARRYSPISLNLSLANAFITMYARCGSMQNAE 407
Query: 169 KLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHG 227
K+F+ +PKRD+ S+ +MI G HG A A+ F +ML +G P+ F IL+AC H
Sbjct: 408 KIFKTLPKRDIISWNTMITGYGTHGSACDAILAFMQMLEDGFRPNGVTFLSILSACRHA 466
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+++ YA+ G + A LFD RD LW+ +IS Y EA +F M + D
Sbjct: 89 LLNMYAENGSLKLACHLFDNVITRDVALWNSMISAYIDYAYYEEANSLFSTMR-TKTRED 147
Query: 112 EYIMVSLMSACSQVGN-LDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
E + ++S C++ + L + K + ++ + + + AL+ M A + A K+
Sbjct: 148 ERTIAVMLSLCAEAADGLKMGKSLHALACKNGMRMDNS-TANALLRMYADLNCAESALKV 206
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS----- 225
F EM D+ SY ++I L +A LF M + P++ +L C
Sbjct: 207 FNEMSDVDVVSYNTLILALCSSNLRGEAWELFGMMRESKVNPNSHTMISLLAVCGDETCL 266
Query: 226 ------HGRLVEEG 233
HG +V++G
Sbjct: 267 NIGRSIHGFVVKQG 280
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 40/164 (24%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM-PERDVVSFTVM--------- 52
AK +F P+R+L WNAM+ +K A F+ M E + S T++
Sbjct: 304 AKYLFEICPDRDLILWNAMIAAFLKKNKNGEALLFFNRMISEEEPNSVTIINVLSTCSDL 363
Query: 53 ------------------------------IDGYAKVGDIASARALFDKAPKRDAFLWSV 82
I YA+ G + +A +F PKRD W+
Sbjct: 364 ANLPYGQCLHAYAARRYSPISLNLSLANAFITMYARCGSMQNAEKIFKTLPKRDIISWNT 423
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVG 126
+I+GY +G +A+ F M +P+ +S++SAC G
Sbjct: 424 MITGYGTHGSACDAILAFMQMLEDGFRPNGVTFLSILSACRHAG 467
>29938.m000599 pentatricopeptide repeat-containing protein, putative
Length = 208
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 104/200 (52%), Gaps = 1/200 (0%)
Query: 75 RDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV 134
R+ W+ +I +A+NG NEAL +F+ M+L +PD +M ++S C ++ L L K +
Sbjct: 4 RNVISWTAMIDSHAENGYTNEALCVFRSMQLSKHRPDSVVMARMLSVCGKMKALKLGKEI 63
Query: 135 DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGY 194
+ + + V A ++ M CG A F +P + ++ ++I+ +
Sbjct: 64 HGHALKKHCE-SIPFVSAEIVRMYGSCGLNHIAKSFFHAIPVKGSMAWTAIIEAHGHNNL 122
Query: 195 AEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYA 254
A+ LF++M++ G P + FTV+L C ++ FE M +Y + S EHY+
Sbjct: 123 QRDAIHLFHEMISGGFTPTHFTFTVVLNICDQAGFADDACRIFELMSRRYKIKASEEHYS 182
Query: 255 CMVDLLSRSGQLKEAYELLK 274
++ LL+R+G+++EA + +
Sbjct: 183 VLIGLLTRAGRIQEAKKFTQ 202
>29908.m005965 pentatricopeptide repeat-containing protein, putative
Length = 498
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 136/257 (52%), Gaps = 11/257 (4%)
Query: 37 VFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEA 96
+ M + DV T ++D YAK G++ ++ +FD KR+ W+ +I+GYA+ GL EA
Sbjct: 193 IVKGMYKDDVFIGTSLVDMYAKCGEMIDSKEVFDGMRKRNTVTWTSIIAGYARKGLGEEA 252
Query: 97 LKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALID 156
+++F+ M+ + + +VS++ AC + + V + +S I ++ + L+
Sbjct: 253 IRLFRVMKRRKIISNNLTVVSVLRACGSISASLTGREVHAQIIKSGIQ-SNVYLGSTLVW 311
Query: 157 MNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAA 216
KCG + A+K+ ++M R++ S+ +MI G GY +A+ +M++EG+ P+
Sbjct: 312 FYCKCGEFNIASKVLQQMSFRNVVSWTAMISGYIGLGYEFEALEFLKEMMDEGVEPNEFT 371
Query: 217 FTVILTACSHGRLVEEGK--HYF--ETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYEL 272
++ L AC++ V +GK H F +T S V S ++ + S+ G L +A ++
Sbjct: 372 YSSALKACANLESVLQGKLIHSFANKTPASSNVYVGSA-----LIYMYSKCGYLSDAIQV 426
Query: 273 LKSMPVESHASAWGALL 289
SMP E + +W ++
Sbjct: 427 FDSMP-ERNLISWKTMI 442
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 176/421 (41%), Gaps = 81/421 (19%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE------------------- 43
A++VF QM ER + SW AM+ G V G A ++F ++ E
Sbjct: 20 ARKVFDQMHERCVVSWTAMINGYVSFGLDDEALRLFSELIENGVTANNRTFVCILNVCSK 79
Query: 44 -------------------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLI 84
R+++ + ++ YA+ GD+ SA F + ++D W+ +I
Sbjct: 80 RLDFELGRQIHACVVKGNWRNLIVDSAIVSFYAQCGDLESAFCAFFQVREKDVVCWTSVI 139
Query: 85 SGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
S +Q G EA ++F M P+E+ + +++ AC + L + + C + +
Sbjct: 140 SACSQQGRGEEAFRMFSQMLGEGFLPNEFTVCAILKACGEKKALKFGRQLHCAIVKGMYK 199
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
+ +L+DM AKCG M + ++F+ M KR+ ++ S+I G + G E+A+ LF
Sbjct: 200 -DDVFIGTSLVDMYAKCGEMIDSKEVFDGMRKRNTVTWTSIIAGYARKGLGEEAIRLFRV 258
Query: 205 MLNEGLIPDNAAFTVILTACS-----------HGRLVEEGKH----------YFETMKSK 243
M +I +N +L AC H ++++ G +F +
Sbjct: 259 MKRRKIISNNLTVVSVLRACGSISASLTGREVHAQIIKSGIQSNVYLGSTLVWFYCKCGE 318
Query: 244 YSMVPSPEHYACMVDLLSRSGQLK---------EAYELLKSM---PVESHASAWGALLGA 291
+++ +++S + + EA E LK M VE + + + L A
Sbjct: 319 FNIASKVLQQMSFRNVVSWTAMISGYIGLGYEFEALEFLKEMMDEGVEPNEFTYSSALKA 378
Query: 292 CKFYGEVELGEIV---ANRLFELEPENSSPYV--LLSSIYAAADQWLDVSHVKNKMKERG 346
C V G+++ AN+ P +S+ YV L +Y+ D V + M ER
Sbjct: 379 CANLESVLQGKLIHSFANK----TPASSNVYVGSALIYMYSKCGYLSDAIQVFDSMPERN 434
Query: 347 L 347
L
Sbjct: 435 L 435
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 135/264 (51%), Gaps = 16/264 (6%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I YA++G++ AR +FD+ +R W+ +I+GY GL +EAL++F + V +
Sbjct: 7 LISVYARLGELIEARKVFDQMHERCVVSWTAMINGYVSFGLDDEALRLFSELIENGVTAN 66
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
V +++ CS+ + +L + + + + + V +A++ A+CG+++ A F
Sbjct: 67 NRTFVCILNVCSKRLDFELGRQIHACVVKG--NWRNLIVDSAIVSFYAQCGDLESAFCAF 124
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
++ ++D+ + S+I S G E+A +F++ML EG +P+ IL AC + ++
Sbjct: 125 FQVREKDVVCWTSVISACSQQGRGEEAFRMFSQMLGEGFLPNEFTVCAILKACGEKKALK 184
Query: 232 EGKH-YFETMKSKYS---MVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGA 287
G+ + +K Y + + +VD+ ++ G++ ++ E+ M + + W +
Sbjct: 185 FGRQLHCAIVKGMYKDDVFIGTS-----LVDMYAKCGEMIDSKEVFDGMR-KRNTVTWTS 238
Query: 288 LLGACKFYGEVELGEIVANRLFEL 311
++ Y LGE A RLF +
Sbjct: 239 IIAG---YARKGLGE-EAIRLFRV 258
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 118/262 (45%), Gaps = 40/262 (15%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDG------ 55
++K VF M +RN +W +++ G + G A ++F M R ++S + +
Sbjct: 220 DSKEVFDGMRKRNTVTWTSIIAGYARKGLGEEAIRLFRVMKRRKIISNNLTVVSVLRACG 279
Query: 56 ---------------------------------YAKVGDIASARALFDKAPKRDAFLWSV 82
Y K G+ A + + R+ W+
Sbjct: 280 SISASLTGREVHAQIIKSGIQSNVYLGSTLVWFYCKCGEFNIASKVLQQMSFRNVVSWTA 339
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+ISGY G EAL+ + M V+P+E+ S + AC+ + ++ K + + +++
Sbjct: 340 MISGYIGLGYEFEALEFLKEMMDEGVEPNEFTYSSALKACANLESVLQGKLIHSFANKTP 399
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+V +ALI M +KCG + A ++F+ MP+R+L S+ +MI + +G +A+ L
Sbjct: 400 AS-SNVYVGSALIYMYSKCGYLSDAIQVFDSMPERNLISWKTMILSYARNGLCREALKLM 458
Query: 203 NKMLNEGLIPDNAAFTVILTAC 224
+M EG+ D+ + ++ +C
Sbjct: 459 YRMQAEGIEVDDYIYASVMGSC 480
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 39/162 (24%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV--------------- 47
A +V QM RN+ SW AM+ G + G A + +M + V
Sbjct: 322 ASKVLQQMSFRNVVSWTAMISGYIGLGYEFEALEFLKEMMDEGVEPNEFTYSSALKACAN 381
Query: 48 -----------SF-------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
SF + +I Y+K G ++ A +FD P+R+ W +
Sbjct: 382 LESVLQGKLIHSFANKTPASSNVYVGSALIYMYSKCGYLSDAIQVFDSMPERNLISWKTM 441
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
I YA+NGL EALK+ M+ ++ D+YI S+M +C V
Sbjct: 442 ILSYARNGLCREALKLMYRMQAEGIEVDDYIYASVMGSCGDV 483
>29585.m000598 pentatricopeptide repeat-containing protein, putative
Length = 664
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 139/293 (47%), Gaps = 49/293 (16%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVF------DDMPE-RDVVSF---- 49
++A VF +MP ++ + NA++ + GD +A +VF + +P+ R +V
Sbjct: 367 NSALTVFNRMPCEDIVTCNALINEYSQIGDPYHAMEVFHVVQISEILPDSRTMVCLLSVC 426
Query: 50 ----------------------------TVMIDGYAKVGDIASARALFDKAP-KRDAFLW 80
+ID YAK G +A+A LF + +D W
Sbjct: 427 ILLHDLEQGSCIHGLIIKFGFDSHCNVKNSLIDMYAKCGSLANAEFLFKRTEFTKDEVSW 486
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVD-CYLS 139
+ LI+GY N EA +F M+L + +P+ VS+ A +++ L + C +
Sbjct: 487 NALIAGYVHNEHAKEAFSLFCQMKLEHFQPNLVTFVSVFPAVARLSALKEGMALHACIMR 546
Query: 140 ---QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAE 196
QS++ +G LIDM AKCG + + LF EM ++ S+ M+ G ++HG
Sbjct: 547 MGFQSNVLVGN-----CLIDMYAKCGQLHNSEHLFHEMKNKNAVSWNVMLAGYAVHGQGY 601
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPS 249
A+ LF+ M + D+ +F +L+AC H L++EG+ F++M ++ + P+
Sbjct: 602 HAIELFSLMQKSHIQADSLSFLSVLSACRHSGLIDEGRKIFDSMYKEHQLEPA 654
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 149/337 (44%), Gaps = 43/337 (12%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP------------------ 42
D AK++F + ++L +W+A++ LV+ +A +F DM
Sbjct: 266 DKAKQLFQGLKVKDLVAWSAIIDALVQSRYAEDALSLFRDMQNDFLKANNVTLLSVLPAC 325
Query: 43 ---------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ D++ T ++ YAK G SA +F++ P D +
Sbjct: 326 ADLMSLRLGKSVHCYAIKADFDSDILIGTSLVSMYAKCGLFNSALTVFNRMPCEDIVTCN 385
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
LI+ Y+Q G P A+++F +++ + PD MV L+S C + +L+ + + +
Sbjct: 386 ALINEYSQIGDPYHAMEVFHVVQISEILPDSRTMVCLLSVCILLHDLEQGSCIHGLIIKF 445
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQAVG 200
D +V +LIDM AKCG++ A LF+ +D S+ ++I G + +A++A
Sbjct: 446 GFD-SHCNVKNSLIDMYAKCGSLANAEFLFKRTEFTKDEVSWNALIAGYVHNEHAKEAFS 504
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
LF +M E P+ F + A + ++EG + + + C++D+
Sbjct: 505 LFCQMKLEHFQPNLVTFVSVFPAVARLSALKEGMALHACIM-RMGFQSNVLVGNCLIDMY 563
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
++ GQL + L M +A +W +L +G+
Sbjct: 564 AKCGQLHNSEHLFHEMK-NKNAVSWNVMLAGYAVHGQ 599
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 139/274 (50%), Gaps = 9/274 (3%)
Query: 20 AMVGGL-VKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
A GGL K G LI+ VF + E DV T +++ Y+K+GD A+ +FDK PKRD
Sbjct: 23 ACTGGLEFKEGILIHRGIVFKGL-ESDVFVGTALVNMYSKMGDPQLAKGVFDKMPKRDVV 81
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ +I G + + P EALK+ + M+L +PD +V+L+ A S++ ++D + + Y+
Sbjct: 82 TWNAMIFGLSHSVAPQEALKLVKSMQLAGQEPDFVTIVNLVPAVSRLADIDACRSLHGYV 141
Query: 139 SQSSIDIGQTHVVA-ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQ 197
I G V + LIDM +KCG++ A ++FE M + S+ +M+ G + + +
Sbjct: 142 ----IRRGFPAVFSNGLIDMYSKCGDIYVACQVFELMQHTNDISWRTMMAGYAHNECFFE 197
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMV 257
+ LF+ M + + L A + R GK E + + + M+
Sbjct: 198 VLDLFDYMKKNNFRLNKVSVASALLAAADVRDSGRGKEICEFARQQ-GIDSDVSITTAMM 256
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
+ ++ G L +A +L + + V+ AW A++ A
Sbjct: 257 TMYAKCGNLDKAKQLFQGLKVKD-LVAWSAIIDA 289
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 115/249 (46%), Gaps = 2/249 (0%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
+ DV T M+ YAK G++ A+ LF +D WS +I Q+ +AL +F+
Sbjct: 246 DSDVSITTAMMTMYAKCGNLDKAKQLFQGLKVKDLVAWSAIIDALVQSRYAEDALSLFRD 305
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
M+ +K + ++S++ AC+ + +L L K V CY ++ D + +L+ M AKCG
Sbjct: 306 MQNDFLKANNVTLLSVLPACADLMSLRLGKSVHCYAIKADFD-SDILIGTSLVSMYAKCG 364
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
+ A +F MP D+ + ++I S G A+ +F+ + ++PD+ +L+
Sbjct: 365 LFNSALTVFNRMPCEDIVTCNALINEYSQIGDPYHAMEVFHVVQISEILPDSRTMVCLLS 424
Query: 223 ACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHA 282
C +E+G + K+ ++D+ ++ G L A L K
Sbjct: 425 VCILLHDLEQGS-CIHGLIIKFGFDSHCNVKNSLIDMYAKCGSLANAEFLFKRTEFTKDE 483
Query: 283 SAWGALLGA 291
+W AL+
Sbjct: 484 VSWNALIAG 492
>30129.m000359 pentatricopeptide repeat-containing protein, putative
Length = 242
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 101/180 (56%), Gaps = 3/180 (1%)
Query: 73 PKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAK 132
P+RD W+VLI GY +AL F+ M+ + P+ MV+++ AC++ G +++
Sbjct: 2 PERDVVSWTVLIMGYRNAENYGDALIAFEQMQYAGIVPNHVTMVNVLGACARFGAIEMGI 61
Query: 133 WVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIH 192
W+ ++ +S +I + +LIDM AKCG ++ + +F M ++++F++ ++I+GL+
Sbjct: 62 WIHDFIRRSGWEI-DVILGTSLIDMYAKCGKINESLSVFRSMKEKNIFAWNAVIKGLAFA 120
Query: 193 GYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYF--ETMKSKYSMVPSP 250
++AV F M EG PD F +L+ CSH V+ GK F T++ +Y+ P
Sbjct: 121 KCGQEAVRWFFTMEQEGFKPDEVTFVNVLSTCSHSGFVDLGKQLFGKTTLQKEYARSSIP 180
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 39/162 (24%)
Query: 10 MPERNLTSWNAMVGGLVKGGDLINARKVFDDMP--------------------------- 42
MPER++ SW ++ G + +A F+ M
Sbjct: 1 MPERDVVSWTVLIMGYRNAENYGDALIAFEQMQYAGIVPNHVTMVNVLGACARFGAIEMG 60
Query: 43 ------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQN 90
E DV+ T +ID YAK G I + ++F +++ F W+ +I G A
Sbjct: 61 IWIHDFIRRSGWEIDVILGTSLIDMYAKCGKINESLSVFRSMKEKNIFAWNAVIKGLAFA 120
Query: 91 GLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAK 132
EA++ F ME KPDE V+++S CS G +DL K
Sbjct: 121 KCGQEAVRWFFTMEQEGFKPDEVTFVNVLSTCSHSGFVDLGK 162
>29815.m000490 pentatricopeptide repeat-containing protein, putative
Length = 537
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 149/314 (47%), Gaps = 63/314 (20%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE----------------- 43
D A VF +MPERN S+NA++ G G+ + A +F M +
Sbjct: 187 DLAVEVFEKMPERNSVSYNALLAGFCNNGEGLKALDLFIKMVQEGAELSEFTLTSVITAC 246
Query: 44 ---------RDVVSF-------------TVMIDGYAKVGDIASARALFDKAPK-RDAF-L 79
R + F T ++D Y + G + A +F P RD+ +
Sbjct: 247 GILRTLEISRQIHGFIMKFGFGSNACIETALLDMYTRCGRMNDADKMFRSWPSDRDSLVI 306
Query: 80 WSVLISGYAQNGLPNEALKIFQ-GMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
+ ++ GYA+NG+PNEA+ +FQ + + DE + S++ C +G+ ++ + + C+
Sbjct: 307 QTSMLCGYARNGMPNEAVSLFQLSLSEGTMVVDEVALTSVLGVCGTLGSQEMGEQIHCHA 366
Query: 139 SQSSI--DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAE 196
++ D+G V ++I M +KC NM++A K F +M D+ S+ +I G +H +
Sbjct: 367 LKTGFLADLG---VGNSIISMYSKCCNMNKAIKSFNDMLAHDVVSWNCLIAGHLLHRQGD 423
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACSHGR--LVEEGKHYFETMKSKYSMVPSPEHYA 254
+A+ ++++M + AA+ SH R LVE+ + F +MK+ Y + P+ EHYA
Sbjct: 424 EALAVWSRM-------EKAAY-------SHTRSDLVEDCRDLFFSMKNIYEVEPTSEHYA 469
Query: 255 CMVDLLSRSGQLKE 268
+ G KE
Sbjct: 470 SFKRITVVRGGEKE 483
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 117/230 (50%), Gaps = 25/230 (10%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAK-------------------- 58
NA+V +K G +++A +VF + DVVS++ +I +AK
Sbjct: 122 NALVVAYLKLGLVLDAYEVFKGLCNPDVVSYSSLISSFAKGNQEMKAIELFFRMRSSAYM 181
Query: 59 -VGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVS 117
G + A +F+K P+R++ ++ L++G+ NG +AL +F M + E+ + S
Sbjct: 182 EFGLVDLAVEVFEKMPERNSVSYNALLAGFCNNGEGLKALDLFIKMVQEGAELSEFTLTS 241
Query: 118 LMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK- 176
+++AC + L++++ + ++ + + AL+DM +CG M+ A+K+F P
Sbjct: 242 VITACGILRTLEISRQIHGFIMKFGFG-SNACIETALLDMYTRCGRMNDADKMFRSWPSD 300
Query: 177 RD-LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEG-LIPDNAAFTVILTAC 224
RD L SM+ G + +G +AV LF L+EG ++ D A T +L C
Sbjct: 301 RDSLVIQTSMLCGYARNGMPNEAVSLFQLSLSEGTMVVDEVALTSVLGVC 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 26/221 (11%)
Query: 61 DIASARALFDKAPK--RDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSL 118
D ARAL K D L + L+ Y + GL +A ++F+G+ PD SL
Sbjct: 100 DFDLARALHASILKLGEDTHLGNALVVAYLKLGLVLDAYEVFKGL----CNPDVVSYSSL 155
Query: 119 MSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRD 178
+S+ ++ GN ++ K ++ + S +A ++ G +D A ++FE+MP+R+
Sbjct: 156 ISSFAK-GNQEM-KAIELFFRMRS---------SAYMEF----GLVDLAVEVFEKMPERN 200
Query: 179 LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--HY 236
SY +++ G +G +A+ LF KM+ EG T ++TAC R +E + H
Sbjct: 201 SVSYNALLAGFCNNGEGLKALDLFIKMVQEGAELSEFTLTSVITACGILRTLEISRQIHG 260
Query: 237 FETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP 277
F MK + E ++D+ +R G++ +A ++ +S P
Sbjct: 261 F-IMKFGFGSNACIE--TALLDMYTRCGRMNDADKMFRSWP 298
>30170.m014105 pentatricopeptide repeat-containing protein, putative
Length = 1218
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 124/228 (54%), Gaps = 10/228 (4%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDGY 56
+NA +VF MPE+++ +WN+M+GG + G A +F M + + +++ MI GY
Sbjct: 397 ENAWKVFDMMPEKDVYTWNSMIGGYCQVGYCGKAHMLFMKMQKSETQPNAITWNNMIWGY 456
Query: 57 AKVGDIASARALF-----DKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
GD A LF D KRD W+ LISGY Q G ++AL IF+ M+ ++ +
Sbjct: 457 IHNGDEDQAMDLFRRMEEDGKIKRDTASWNSLISGYLQIGQKDKALSIFRQMQSFSININ 516
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
++S++ AC+ + L + K + + + ++D + +LID AK GN+ + +F
Sbjct: 517 SVTILSVLPACANLIALKMVKEIHGCVIRRNLD-SLLPITNSLIDTYAKSGNIGYSRTIF 575
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTV 219
+ +D ++ S+I G + G ++ A+GL ++M G+ P+ + F++
Sbjct: 576 DRALFKDFITWNSLIAGYVLFGCSDAALGLVDQMKKLGIKPNRSTFSL 623
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 134/282 (47%), Gaps = 9/282 (3%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDGYAK 58
A + F M + +WNA++ G + G + A+++FD M E + VS+ ++I GY +
Sbjct: 228 ASKCFEMMDKSETAAWNALISGYCQHGQIEEAQRLFDAMREEGIEPGLVSWNILIAGYNQ 287
Query: 59 VGDIASARALFDK----APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYI 114
+G A L K D W+ +ISG AQN ++AL +F M L V+P+
Sbjct: 288 LGYFDIAMELMKKMEVLGTSPDVVTWTSMISGLAQNDKASKALHLFNDMILARVEPNGVT 347
Query: 115 MVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM 174
+ S +SAC+ + L+ + + + V +LIDM +KCG ++ A K+F+ M
Sbjct: 348 ISSAVSACASLKVLNEGLEIHALAVKLGF-VEDVLVGNSLIDMYSKCGKLENAWKVFDMM 406
Query: 175 PKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK 234
P++D++++ SMI G GY +A LF KM P+ + ++ H ++
Sbjct: 407 PEKDVYTWNSMIGGYCQVGYCGKAHMLFMKMQKSETQPNAITWNNMIWGYIHNGDEDQAM 466
Query: 235 HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
F M+ + + ++ + GQ +A + + M
Sbjct: 467 DLFRRMEEDGKIKRDTASWNSLISGYLQIGQKDKALSIFRQM 508
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 128/271 (47%), Gaps = 20/271 (7%)
Query: 34 ARKV---FDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQN 90
RKV F + E++ T ++ YAK G ++ AR LF + +++ + WS +I +++
Sbjct: 93 GRKVHAHFHLVQEKNPFLETKLVSMYAKCGSLSDARKLFGEMREKNLYTWSAMIGAFSRE 152
Query: 91 GLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHV 150
E +++F M N PD +++ ++ AC ++ + V + +D G V
Sbjct: 153 HRWKEVVELFYMMMEENCLPDAFLLPKILQACGNSRDIKSGEMVHSLAIKCGVD-GYPFV 211
Query: 151 VAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGL 210
+++ + AKCG + A+K FE M K + ++ ++I G HG E+A LF+ M EG+
Sbjct: 212 NNSILAVYAKCGKLSLASKCFEMMDKSETAAWNALISGYCQHGQIEEAQRLFDAMREEGI 271
Query: 211 IPDNAAFTVILTACSHGRLVEEGKHYF----ETMKSKYSMVPSPE--HYACMVDLLSRSG 264
P ++ +++ + YF E MK + SP+ + M+ L+++
Sbjct: 272 EPGLVSWNILIAGYNQ-------LGYFDIAMELMKKMEVLGTSPDVVTWTSMISGLAQND 324
Query: 265 QLKEAYELLKSM---PVESHASAWGALLGAC 292
+ +A L M VE + + + AC
Sbjct: 325 KASKALHLFNDMILARVEPNGVTISSAVSAC 355
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 137/329 (41%), Gaps = 73/329 (22%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE------------------ 43
+A+++F +M E+NL +W+AM+G + ++F M E
Sbjct: 126 DARKLFGEMREKNLYTWSAMIGAFSREHRWKEVVELFYMMMEENCLPDAFLLPKILQACG 185
Query: 44 --RDVVSFTVM--------IDG-----------YAKVGDIASARALFDKAPKRDAFLWSV 82
RD+ S ++ +DG YAK G ++ A F+ K + W+
Sbjct: 186 NSRDIKSGEMVHSLAIKCGVDGYPFVNNSILAVYAKCGKLSLASKCFEMMDKSETAAWNA 245
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
LISGY Q+G EA ++F M ++P L++ +Q+G D+A
Sbjct: 246 LISGYCQHGQIEEAQRLFDAMREEGIEPGLVSWNILIAGYNQLGYFDIA----------- 294
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
M+ K+ D+ ++ SMI GL+ + A +A+ LF
Sbjct: 295 ---------------------MELMKKMEVLGTSPDVVTWTSMISGLAQNDKASKALHLF 333
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
N M+ + P+ + ++AC+ +++ EG + K V ++D+ S+
Sbjct: 334 NDMILARVEPNGVTISSAVSACASLKVLNEGLE-IHALAVKLGFVEDVLVGNSLIDMYSK 392
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGA 291
G+L+ A+++ MP E W +++G
Sbjct: 393 CGKLENAWKVFDMMP-EKDVYTWNSMIGG 420
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 8/222 (3%)
Query: 89 QNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQT 148
+ G NEA+ + + K +SL+ +C ++ L + V + +
Sbjct: 51 KKGRLNEAVSALELIAQHGSKVSPKTFISLLQSCIDCNSVTLGRKVHAHFHL--VQEKNP 108
Query: 149 HVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE 208
+ L+ M AKCG++ A KLF EM +++L+++ +MI S ++ V LF M+ E
Sbjct: 109 FLETKLVSMYAKCGSLSDARKLFGEMREKNLYTWSAMIGAFSREHRWKEVVELFYMMMEE 168
Query: 209 GLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKE 268
+PD IL AC + R ++ G+ ++ K + P ++ + ++ G+L
Sbjct: 169 NCLPDAFLLPKILQACGNSRDIKSGE-MVHSLAIKCGVDGYPFVNNSILAVYAKCGKLSL 227
Query: 269 AYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE 310
A + + M +S +AW AL+ +G++E A RLF+
Sbjct: 228 ASKCFEMMD-KSETAAWNALISGYCQHGQIE----EAQRLFD 264
>29736.m002025 pentatricopeptide repeat-containing protein, putative
Length = 593
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 135/286 (47%), Gaps = 40/286 (13%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP------------------- 42
+A +VF +MP+RN S+NA + G + G + A VF +M
Sbjct: 189 DAMKVFDEMPDRNQASFNATISGFSQKGCCMEALIVFKEMAFCGFRPNSVTIASVLPACD 248
Query: 43 -----------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
E DV T ++ Y+ G + A +F + P R ++ +S
Sbjct: 249 SVDLSVQMHCCAIKLGVEMDVYVATSLVTTYSGCGHLTLATKVFGEMPNRTVVSYNAFVS 308
Query: 86 GYAQNGLPNEALKIFQGM-ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
G NG+ N LK+F+ M E +KP+ +VS+++ACS + + V +L ++ +
Sbjct: 309 GLLHNGVTNVVLKVFKDMREYSTLKPNSLTLVSVIAACSTLLYIQFGMQVHVFLKKTQMG 368
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEM-PKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
T V +L+DM +KCG A +F EM ++L ++ SMI G+ ++ ++ A+ LF
Sbjct: 369 C-DTMVGTSLVDMYSKCGYWKWAYNVFNEMNDNKNLITWNSMIAGMMLNAQSQNAIELFE 427
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPS 249
+ ++GL PD+A + +++ E +F+ M+ MVPS
Sbjct: 428 LLESQGLEPDSATWNSMISGFEQLDKGVEAFKFFKKMQLS-GMVPS 472
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 145/308 (47%), Gaps = 13/308 (4%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
++ + T + Y ++ + A +FD+ P R+ ++ ISG++Q G EAL +F+ M
Sbjct: 170 NIYTATALTSMYMQLALLPDAMKVFDEMPDRNQASFNATISGFSQKGCCMEALIVFKEMA 229
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
+P+ + S++ AC V DL+ + C + +++ +V +L+ + CG++
Sbjct: 230 FCGFRPNSVTIASVLPACDSV---DLSVQMHCCAIKLGVEM-DVYVATSLVTTYSGCGHL 285
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLN-EGLIPDNAAFTVILTA 223
A K+F EMP R + SY + + GL +G + +F M L P++ ++ A
Sbjct: 286 TLATKVFGEMPNRTVVSYNAFVSGLLHNGVTNVVLKVFKDMREYSTLKPNSLTLVSVIAA 345
Query: 224 CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHAS 283
CS ++ G +K K M +VD+ S+ G K AY + M +
Sbjct: 346 CSTLLYIQFGMQVHVFLK-KTQMGCDTMVGTSLVDMYSKCGYWKWAYNVFNEMNDNKNLI 404
Query: 284 AWGALLGACKFYGE----VELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVK 339
W +++ + +EL E++ ++ LEP++++ ++S + D+ ++
Sbjct: 405 TWNSMIAGMMLNAQSQNAIELFELLESQ--GLEPDSATWNSMISG-FEQLDKGVEAFKFF 461
Query: 340 NKMKERGL 347
KM+ G+
Sbjct: 462 KKMQLSGM 469
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 31/227 (13%)
Query: 3 AKRVFVQMPE-RNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGD 61
A VF +M + +NL +WN+M+ G++ NA ++F+ + + +
Sbjct: 390 AYNVFNEMNDNKNLITWNSMIAGMMLNAQSQNAIELFELLESQGL--------------- 434
Query: 62 IASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSA 121
+ D+ W+ +ISG+ Q EA K F+ M+L + P + SL++A
Sbjct: 435 ------------EPDSATWNSMISGFEQLDKGVEAFKFFKKMQLSGMVPSLKSVTSLLAA 482
Query: 122 CSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFE--EMPKRDL 179
C+ + L K + ++ +++++ + + LIDM KCG ++F+ E+ +D
Sbjct: 483 CASLTALQCGKEIHGHVVRTNMNFDE-FMATGLIDMYMKCGFSLWGQRVFDQFEIKPKDP 541
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH 226
+ ++I G + +G E +F++ML E + P+ FT +LT C H
Sbjct: 542 AIWNALISGYARNGENESVFEVFDQMLEEKVEPNLTTFTGVLTVCGH 588
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Query: 90 NGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTH 149
NG EA+ + + ++ P ++ +L+ AC+++ + A+ + +L ++ ++ +
Sbjct: 114 NGFYKEAISLHSRLHSASIHPHQFTFPALLKACAKLNSPLQAQIIHTHLIKTGFNL-NIY 172
Query: 150 VVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEG 209
AL M + + A K+F+EMP R+ S+ + I G S G +A+ +F +M G
Sbjct: 173 TATALTSMYMQLALLPDAMKVFDEMPDRNQASFNATISGFSQKGCCMEALIVFKEMAFCG 232
Query: 210 LIPDNAAFTVILTAC 224
P++ +L AC
Sbjct: 233 FRPNSVTIASVLPAC 247
>29751.m001865 pentatricopeptide repeat-containing protein, putative
Length = 383
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 11/185 (5%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
YAK GD+ +A FD + W+ +I+GY Q+GL L ++ M + PD+Y
Sbjct: 53 YAKSGDLKTAHMFFDNLMDKSLISWNAMIAGYVQSGLEEIGLSLYYKMRQNGLTPDQYTF 112
Query: 116 VSLMSACSQVGNLDLAK-----WVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
S AC+ + L K + C L ++ + V +ALIDM KC ++ +K
Sbjct: 113 ASAFRACAALATLQHGKKAHGVMIKCNLRENVV------VNSALIDMYFKCSSLTDGHKA 166
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLV 230
F + R++ ++ S+I G HG + + F++M +EG P+ F L ACSHG L+
Sbjct: 167 FNKSVNRNIVTWTSLISGYGQHGRVTEVLESFHRMKDEGFRPNYVTFLAALCACSHGGLI 226
Query: 231 EEGKH 235
+E H
Sbjct: 227 DEVTH 231
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 67/167 (40%), Gaps = 39/167 (23%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGG-------------------------------- 29
A F + +++L SWNAM+ G V+ G
Sbjct: 61 TAHMFFDNLMDKSLISWNAMIAGYVQSGLEEIGLSLYYKMRQNGLTPDQYTFASAFRACA 120
Query: 30 ---DLINARKVFDDMPE----RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
L + +K M + +VV + +ID Y K + F+K+ R+ W+
Sbjct: 121 ALATLQHGKKAHGVMIKCNLRENVVVNSALIDMYFKCSSLTDGHKAFNKSVNRNIVTWTS 180
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLD 129
LISGY Q+G E L+ F M+ +P+ ++ + ACS G +D
Sbjct: 181 LISGYGQHGRVTEVLESFHRMKDEGFRPNYVTFLAALCACSHGGLID 227
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 2/145 (1%)
Query: 154 LIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPD 213
L+ + AK G++ A+ F+ + + L S+ +MI G G E + L+ KM GL PD
Sbjct: 49 LLILYAKSGDLKTAHMFFDNLMDKSLISWNAMIAGYVQSGLEEIGLSLYYKMRQNGLTPD 108
Query: 214 NAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELL 273
F AC+ ++ GK M K ++ + + ++D+ + L + ++
Sbjct: 109 QYTFASAFRACAALATLQHGKKAHGVM-IKCNLRENVVVNSALIDMYFKCSSLTDGHKAF 167
Query: 274 KSMPVESHASAWGALLGACKFYGEV 298
V + W +L+ +G V
Sbjct: 168 NK-SVNRNIVTWTSLISGYGQHGRV 191
>29680.m001729 pentatricopeptide repeat-containing protein, putative
Length = 585
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 105/199 (52%), Gaps = 12/199 (6%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALF-DKAPKRDAFLWSVLISGYAQNGLPNEALKIFQ 101
E D V +I Y+K G++ SA +F KRD WS LIS YA NGL +A++++
Sbjct: 107 ELDSVILNSLISLYSKCGELNSANDIFISMGNKRDLVSWSALISCYATNGLEFDAIRVYI 166
Query: 102 GMELMNVKPDEYIMVSLMSACSQ-----VGNLDLAKWVDCYLSQSSIDIGQTHVVAALID 156
M + P+EY +++ +CS G + + C S + +G ALID
Sbjct: 167 DMLVSGFFPNEYCYSAVIKSCSNRENFSYGEIIFGSLIKCGYLNSHVCVG-----CALID 221
Query: 157 MNAK-CGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNA 215
M AK CG+++ A K+F+ M +R++ ++ MI GY A+ LFN M+ G +PDN
Sbjct: 222 MYAKGCGDVEGACKVFDNMSERNIVTWTLMISRFQQLGYYRDAIDLFNHMIFSGFMPDNY 281
Query: 216 AFTVILTACSHGRLVEEGK 234
+ +++AC+ L+ GK
Sbjct: 282 TLSGVVSACAELGLLSLGK 300
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 172/389 (44%), Gaps = 80/389 (20%)
Query: 1 DNAKRVFVQM-PERNLTSWNAMVGGLVKGGDLINARKVFDDM------------------ 41
++A +F+ M +R+L SW+A++ G +A +V+ DM
Sbjct: 127 NSANDIFISMGNKRDLVSWSALISCYATNGLEFDAIRVYIDMLVSGFFPNEYCYSAVIKS 186
Query: 42 -PERDVVSF---------------------TVMIDGYAK-VGDIASARALFDKAPKRDAF 78
R+ S+ +ID YAK GD+ A +FD +R+
Sbjct: 187 CSNRENFSYGEIIFGSLIKCGYLNSHVCVGCALIDMYAKGCGDVEGACKVFDNMSERNIV 246
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+++IS + Q G +A+ +F M PD Y + ++SAC+++G L L K + +
Sbjct: 247 TWTLMISRFQQLGYYRDAIDLFNHMIFSGFMPDNYTLSGVVSACAELGLLSLGKELHSWA 306
Query: 139 SQSSIDIGQTHVVAALIDMNAKC---GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYA 195
+S + + V +L+DM AKC G++D + K+F+ M ++ S+ ++I G +G +
Sbjct: 307 IKSGL-VYDVCVGCSLVDMYAKCAVDGSLDDSRKVFDRMTNHNVMSWTAIITGYVQNGRS 365
Query: 196 E-QAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYF---------------ET 239
+ +A LF +M+ + P++ F+ IL AC++ + G+ ++ +
Sbjct: 366 DMEATELFLEMIEGHVKPNHFTFSSILKACANLSDLHLGEQFYAHAVKLGFASVNCVGNS 425
Query: 240 MKSKYSMVPSPEH---------------YACMVDLLSRSGQLKEAYELLKSMPVES---H 281
+ S YS + E+ Y +V+ ++ +EA+EL + +
Sbjct: 426 LISMYSRCDNMENARKAFDVLFEKNLVSYNTIVEAYAKGLNSEEAFELFNEIEDTGFVVN 485
Query: 282 ASAWGALLGACKFYGEVELGEIVANRLFE 310
A + +LL G + GE + R+ +
Sbjct: 486 AFTFASLLSGASSIGAIGKGEQIHARILK 514
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 115/246 (46%), Gaps = 41/246 (16%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDL-INARKVFDDMPERDVV--SFTV------ 51
D++++VF +M N+ SW A++ G V+ G + A ++F +M E V FT
Sbjct: 335 DDSRKVFDRMTNHNVMSWTAIITGYVQNGRSDMEATELFLEMIEGHVKPNHFTFSSILKA 394
Query: 52 -------------------------------MIDGYAKVGDIASARALFDKAPKRDAFLW 80
+I Y++ ++ +AR FD +++ +
Sbjct: 395 CANLSDLHLGEQFYAHAVKLGFASVNCVGNSLISMYSRCDNMENARKAFDVLFEKNLVSY 454
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ ++ YA+ EA ++F +E + + SL+S S +G + + + + +
Sbjct: 455 NTIVEAYAKGLNSEEAFELFNEIEDTGFVVNAFTFASLLSGASSIGAIGKGEQIHARILK 514
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
S H+ ALI M ++CG+++ A ++F M R++ S+ SMI G + HG+A +A+
Sbjct: 515 SDFKT-NLHISNALISMYSRCGDIEAAFQVFNGMGDRNVISWTSMITGYAKHGFAVRALE 573
Query: 201 LFNKML 206
F+KML
Sbjct: 574 TFHKML 579
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 128/265 (48%), Gaps = 41/265 (15%)
Query: 29 GDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYA 88
G L ++RKVFD M +V+S+T +I+GY
Sbjct: 332 GSLDDSRKVFDRMTNHNVMSWT-------------------------------AIITGYV 360
Query: 89 QNGLPN-EALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQ 147
QNG + EA ++F M +VKP+ + S++ AC+ + +L L + Y +
Sbjct: 361 QNGRSDMEATELFLEMIEGHVKPNHFTFSSILKACANLSDLHLGEQF--YAHAVKLGFAS 418
Query: 148 THVVA-ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
+ V +LI M ++C NM+ A K F+ + +++L SY ++++ + +E+A LFN++
Sbjct: 419 VNCVGNSLISMYSRCDNMENARKAFDVLFEKNLVSYNTIVEAYAKGLNSEEAFELFNEIE 478
Query: 207 NEGLIPDNAAFTVILTACSHGRLVEEGKH-YFETMKSKYSMVPSPEHYA-CMVDLLSRSG 264
+ G + + F +L+ S + +G+ + +KS + + H + ++ + SR G
Sbjct: 479 DTGFVVNAFTFASLLSGASSIGAIGKGEQIHARILKSDF---KTNLHISNALISMYSRCG 535
Query: 265 QLKEAYELLKSMPVESHASAWGALL 289
++ A+++ M + + +W +++
Sbjct: 536 DIEAAFQVFNGMG-DRNVISWTSMI 559
>29983.m003251 pentatricopeptide repeat-containing protein, putative
Length = 483
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 152/339 (44%), Gaps = 48/339 (14%)
Query: 4 KRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERD-----------------V 46
KR +P NL + + G K G L++A + + + R+ V
Sbjct: 5 KRHCSSLPSFNLKNKEIKIIGFCKSGALLHALDILNSIDSREISNKPFIYASLLQTCTKV 64
Query: 47 VSFTVMIDGYAKV-----------------------GDIASARALFDKAPKRDAFLWSVL 83
VSF + +A V D R +FD RD W+ +
Sbjct: 65 VSFNHGLQIHAHVVKSGLETDRFVGNSLLALYFKLSTDFFETRRVFDGLYFRDVISWTSM 124
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I+GY + P +AL +F M + V P+ + + +++ AC+ +G L L K C +
Sbjct: 125 ITGYVKGEKPKKALDLFWEMLDVGVDPNAFTLSAVIKACTDLGTLMLGKCFHCVIMIRGF 184
Query: 144 DIGQTHVV-AALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
HV+ +ALID+ + +D A +LF+E+ + D + S+I + + ++A+G F
Sbjct: 185 H--SNHVIGSALIDLYGRNYELDDARRLFDELLEPDAICWTSVISAYTRNDMYDKALGFF 242
Query: 203 NKMLNE-GLIPDNAAFTVILTACSHGRLVEEGKH-YFETMKSKYSMVPSPEHYACMVDLL 260
M + GL PD F +LTAC + R +++GK + + + S +S E + +VD+
Sbjct: 243 YLMQRKLGLAPDGFTFGTVLTACGNLRRLKQGKEVHAKLITSGFSGNVVVE--SSLVDMY 300
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
+ G + E+ + M V++ S W ALLG G+ E
Sbjct: 301 GKCGLVDESQRVFDRMSVKNSVS-WSALLGGFCQNGDFE 338
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 106/184 (57%), Gaps = 8/184 (4%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
+VV + ++D Y K G + ++ +FD+ +++ WS L+ G+ QNG ++IF+ M
Sbjct: 289 NVVVESSLVDMYGKCGLVDESQRVFDRMSVKNSVSWSALLGGFCQNGDFESVIRIFREM- 347
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVV--AALIDMNAKCG 162
D Y +++ AC+ + + K V C + G V+ +AL+D+ AKCG
Sbjct: 348 --GEADDLYSFGTVLRACAGLAAVRQGKEVHCQYVRRG---GWRDVIIESALVDLYAKCG 402
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
+D A+++F +M R+L ++ SMI G + +G+AE+A+ +F++M+ EG PD F +L
Sbjct: 403 CIDFAHRIFTKMTVRNLITWNSMICGFAQNGWAEEALRIFDEMVKEGTKPDYITFIGVLF 462
Query: 223 ACSH 226
ACSH
Sbjct: 463 ACSH 466
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 151/336 (44%), Gaps = 56/336 (16%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER--DVVSFTV--------- 51
+RVF + R++ SW +M+ G VKG A +F +M + D +FT+
Sbjct: 106 TRRVFDGLYFRDVISWTSMITGYVKGEKPKKALDLFWEMLDVGVDPNAFTLSAVIKACTD 165
Query: 52 ----------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
+ID Y + ++ AR LFD+ + DA W+ +
Sbjct: 166 LGTLMLGKCFHCVIMIRGFHSNHVIGSALIDLYGRNYELDDARRLFDELLEPDAICWTSV 225
Query: 84 ISGYAQNGLPNEALKIFQGMEL-MNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
IS Y +N + ++AL F M+ + + PD + ++++AC + L K V L S
Sbjct: 226 ISAYTRNDMYDKALGFFYLMQRKLGLAPDGFTFGTVLTACGNLRRLKQGKEVHAKLITSG 285
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
G V ++L+DM KCG +D + ++F+ M ++ S+ +++ G +G E + +F
Sbjct: 286 FS-GNVVVESSLVDMYGKCGLVDESQRVFDRMSVKNSVSWSALLGGFCQNGDFESVIRIF 344
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGK----HYFETMKSKYSMVPSPEHYACMVD 258
+M G D +F +L AC+ V +GK Y + ++ S +VD
Sbjct: 345 REM---GEADDLYSFGTVLRACAGLAAVRQGKEVHCQYVRRGGWRDVIIESA-----LVD 396
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKF 294
L ++ G + A+ + M V + + W +++ C F
Sbjct: 397 LYAKCGCIDFAHRIFTKMTVRNLIT-WNSMI--CGF 429
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 79/173 (45%), Gaps = 36/173 (20%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE----------------- 43
D ++RVF +M +N SW+A++GG + GD + ++F +M E
Sbjct: 307 DESQRVFDRMSVKNSVSWSALLGGFCQNGDFESVIRIFREMGEADDLYSFGTVLRACAGL 366
Query: 44 -------------------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLI 84
RDV+ + ++D YAK G I A +F K R+ W+ +I
Sbjct: 367 AAVRQGKEVHCQYVRRGGWRDVIIESALVDLYAKCGCIDFAHRIFTKMTVRNLITWNSMI 426
Query: 85 SGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY 137
G+AQNG EAL+IF M KPD + ++ ACS LAK + CY
Sbjct: 427 CGFAQNGWAEEALRIFDEMVKEGTKPDYITFIGVLFACSHTDREPLAKGILCY 479
>29763.m000190 pentatricopeptide repeat-containing protein, putative
Length = 392
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 117/220 (53%), Gaps = 22/220 (10%)
Query: 27 KGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
K G + AR+VFD+ + +VV +T +I G G I AR +FD+ P+R+ +S ++SG
Sbjct: 155 KHGAVEYARQVFDESSDTNVVCWTSLISGCCINGLIDEAREMFDRMPERNEVSYSAMVSG 214
Query: 87 YAQNGLPNEALKIFQGMELM-NVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI 145
+ +NG NEA+ +F+ +++ NV+ + ++VS+++AC+ +G K + Y D+
Sbjct: 215 FVRNGFFNEAIALFRELKICGNVRFNASLLVSVLNACAAIGAFQDGKCIHSY-----ADM 269
Query: 146 GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM 205
++D LF M +D+ ++ +MI GL+I+G + +GLF +M
Sbjct: 270 HGFSCELQIVD-------------LFSRMQYKDVTTWSAMILGLAINGENHRGIGLFAEM 316
Query: 206 LNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYS 245
+G + F +LTAC+H L H + T S Y+
Sbjct: 317 ERKGPKANAVTFMGVLTACNHKTL---KIHTYVTRFSSYA 353
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 111/236 (47%), Gaps = 43/236 (18%)
Query: 60 GDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLM 119
GDI A+A+F++ P +F ++ +I G++QN L + + +F M + ++ + + SL+
Sbjct: 59 GDINYAQAVFNQMPLPSSFDFNSMILGFSQNSLSQKGISLFARMNSIRIETNTHTFTSLL 118
Query: 120 SACSQVGNLD-----LAKW---VDCYLSQSSIDIGQTH--------VVAALIDMNAKC-- 161
C + LD + K+ D Y++ S I + H V D N C
Sbjct: 119 KCCFCLSLLDQVHCQILKYGYKSDVYINSSVISMYSKHGAVEYARQVFDESSDTNVVCWT 178
Query: 162 ---------GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIP 212
G +D A ++F+ MP+R+ SY +M+ G +G+ +A+ LF ++ G +
Sbjct: 179 SLISGCCINGLIDEAREMFDRMPERNEVSYSAMVSGFVRNGFFNEAIALFRELKICGNVR 238
Query: 213 DNAAFTV-ILTACSHGRLVEEGK--HYFETMKSKYSMVPSPEHYAC---MVDLLSR 262
NA+ V +L AC+ ++GK H + M ++C +VDL SR
Sbjct: 239 FNASLLVSVLNACAAIGAFQDGKCIHSYADMHG----------FSCELQIVDLFSR 284
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 23/147 (15%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTV-----MIDG 55
D A+ +F +MPERN S++AMV G V+ G A +F ++ V F +++
Sbjct: 191 DEAREMFDRMPERNEVSYSAMVSGFVRNGFFNEAIALFRELKICGNVRFNASLLVSVLNA 250
Query: 56 YAKVGDIASARA------------------LFDKAPKRDAFLWSVLISGYAQNGLPNEAL 97
A +G + LF + +D WS +I G A NG + +
Sbjct: 251 CAAIGAFQDGKCIHSYADMHGFSCELQIVDLFSRMQYKDVTTWSAMILGLAINGENHRGI 310
Query: 98 KIFQGMELMNVKPDEYIMVSLMSACSQ 124
+F ME K + + +++AC+
Sbjct: 311 GLFAEMERKGPKANAVTFMGVLTACNH 337
>29737.m001266 pentatricopeptide repeat-containing protein, putative
Length = 555
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 133/273 (48%), Gaps = 41/273 (15%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINA----RKVFDDMPERDVVSFT-------- 50
A VF M E+N+ SWNAMV + + A R++ D + V+FT
Sbjct: 267 ASVVFHLMTEKNVVSWNAMVANFAQNRFELAAIELVRQMQTDGAIPNPVTFTNALPACAR 326
Query: 51 ---------------------------VMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
+ D YAK G + AR +F+ + RD +++L
Sbjct: 327 MGFLRPGKEIHARAFRMGCYFDQFVSNALTDMYAKCGFLNLARNVFNISL-RDEVSYNIL 385
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I GY+Q +E+L +F M L+ ++ D + +++AC+ + L + + + + ++
Sbjct: 386 IVGYSQTTNSSESLSLFLEMGLVGMERDVVSYMGVIAACASLVALKQGEEIHALVVRKNL 445
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+ + +L+D KCG +D A K+F + ++D S+ ++I G+ + G E A+ LF
Sbjct: 446 HM-HIFIANSLLDFYTKCGKIDLACKIFYRISEKDAASWNTIILGVGMLGELEAAINLFE 504
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHY 236
M +G+ D+ ++ +L+ACSHG LVE+GK Y
Sbjct: 505 AMREDGVEYDSVSYIAVLSACSHGGLVEKGKKY 537
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 126/273 (46%), Gaps = 41/273 (15%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERD--------VVSF---- 49
+AK+VF +M ER++ SWN ++G G + A +F +M R VVS
Sbjct: 63 DAKKVFDEMLERDVVSWNTLLGAFSVNGFYLKALDLFYEMNLRSGFRPNMVTVVSVLPVC 122
Query: 50 ----------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
++D Y K G++ S+R +FD+ +R+ W+
Sbjct: 123 AALEDEVVASEIHCYVVKIGLDSQVTLCNALVDVYGKCGNLKSSRRVFDEMMERNEVSWN 182
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I+ A +AL+ F+ M VKP+ + S++ ++ + DL K + + +
Sbjct: 183 AIITSLAYMEHNKDALEAFRLMINEEVKPNSVTIASILPVLVELEHFDLGKEIHGFSLRF 242
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
I+ + +LIDM AK G+ +A+ +F M ++++ S+ +M+ + + + A+ L
Sbjct: 243 GIE-SDVFISNSLIDMYAKSGHSTQASVVFHLMTEKNVVSWNAMVANFAQNRFELAAIEL 301
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK 234
+M +G IP+ FT L AC+ + GK
Sbjct: 302 VRQMQTDGAIPNPVTFTNALPACARMGFLRPGK 334
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 123/247 (49%), Gaps = 4/247 (1%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
DV ++ Y G ++ A+ +FD+ +RD W+ L+ ++ NG +AL +F M
Sbjct: 44 DVFVGNTLLLFYGNTGYLSDAKKVFDEMLERDVVSWNTLLGAFSVNGFYLKALDLFYEMN 103
Query: 105 LMN-VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGN 163
L + +P+ +VS++ C+ + + +A + CY+ + +D Q + AL+D+ KCGN
Sbjct: 104 LRSGFRPNMVTVVSVLPVCAALEDEVVASEIHCYVVKIGLD-SQVTLCNALVDVYGKCGN 162
Query: 164 MDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
+ + ++F+EM +R+ S+ ++I L+ + + A+ F M+NE + P++ IL
Sbjct: 163 LKSSRRVFDEMMERNEVSWNAIITSLAYMEHNKDALEAFRLMINEEVKPNSVTIASILPV 222
Query: 224 CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHAS 283
+ GK ++ + ++D+ ++SG +A + M E +
Sbjct: 223 LVELEHFDLGKE-IHGFSLRFGIESDVFISNSLIDMYAKSGHSTQASVVFHLMT-EKNVV 280
Query: 284 AWGALLG 290
+W A++
Sbjct: 281 SWNAMVA 287
>29807.m000472 pentatricopeptide repeat-containing protein, putative
Length = 506
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 139/314 (44%), Gaps = 41/314 (13%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDG------ 55
+A++VF M ++N+ +WN+M+ G V+ G + A KVF +M D+ V + G
Sbjct: 76 DARKVFDAMRQKNVVTWNSMIMGYVQNGLYLEAIKVFANMRLEDIEYSRVTLLGFLSAAA 135
Query: 56 ---------------------------------YAKVGDIASARALFDKAPKRDAFLWSV 82
Y+KVG I A +F ++D W++
Sbjct: 136 NLGAVTEGKQGHAIAVKGGYELDNILGSSILNFYSKVGLIEDAELVFSNMAEKDVVTWNL 195
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
LIS Y Q L +AL + M N+K D + S++SAC+ N+ L K CY +++
Sbjct: 196 LISSYLQCELVEKALNMCHLMRFQNMKFDSVTLDSILSACANTKNIQLGKEAHCYCIRNN 255
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
++ V A+++M AKCG++ A ++F +DL + ++ + G + + LF
Sbjct: 256 LE-SDVDVANAIVNMYAKCGSIHDAKEVFNSTMNKDLTLWNMLLTAYAQLGLVGETLRLF 314
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
+M E + P+ ++ ++ V + K F M++ + P+ ++ L
Sbjct: 315 YQMQLESVPPNVTSWNAVILGFLRNGQVNKAKELFAEMQA-VGIHPNLVTLTTLISGLIH 373
Query: 263 SGQLKEAYELLKSM 276
+G EA + M
Sbjct: 374 NGLGNEALAIFLKM 387
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 134/272 (49%), Gaps = 12/272 (4%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+ID Y K G + AR +FD +++ W+ +I GY QNGL EA+K+F M L +++
Sbjct: 64 LIDMYGKCGILMDARKVFDAMRQKNVVTWNSMIMGYVQNGLYLEAIKVFANMRLEDIEYS 123
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
++ +SA + +G + K + ++ + +++++ +K G ++ A +F
Sbjct: 124 RVTLLGFLSAAANLGAVTEGKQGHAIAVKGGYELDNI-LGSSILNFYSKVGLIEDAELVF 182
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
M ++D+ ++ +I E+A+ + + M + + D+ IL+AC++ + ++
Sbjct: 183 SNMAEKDVVTWNLLISSYLQCELVEKALNMCHLMRFQNMKFDSVTLDSILSACANTKNIQ 242
Query: 232 EGK--HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
GK H + + S V +V++ ++ G + +A E+ S + + W LL
Sbjct: 243 LGKEAHCYCIRNNLESDVDVAN---AIVNMYAKCGSIHDAKEVFNS-TMNKDLTLWNMLL 298
Query: 290 GACKFYGEVELGEIVANRLF-ELEPENSSPYV 320
A G V GE + RLF +++ E+ P V
Sbjct: 299 TAYAQLGLV--GETL--RLFYQMQLESVPPNV 326
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 9/179 (5%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYA 57
+AK VF ++LT WN ++ + G + ++F M +V S+ +I G+
Sbjct: 278 DAKEVFNSTMNKDLTLWNMLLTAYAQLGLVGETLRLFYQMQLESVPPNVTSWNAVILGFL 337
Query: 58 KVGDIASARALFDK----APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEY 113
+ G + A+ LF + + + LISG NGL NEAL IF M+ ++P+
Sbjct: 338 RNGQVNKAKELFAEMQAVGIHPNLVTLTTLISGLIHNGLGNEALAIFLKMQEYGIRPNIT 397
Query: 114 IMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFE 172
+++ +SAC+ +L + + Y+ + + Q V AL M AKCGN +A ++F+
Sbjct: 398 SIINTISACTDPASLQCGRAIHGYILRHDL-WSQIPVANALATMYAKCGNTRQAKRVFD 455
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 9/240 (3%)
Query: 91 GLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHV 150
G AL F M + D +++ + + AC + + K V Y+ + +D G V
Sbjct: 2 GFNEIALMGFYEMIDCGLLADNFVVPNALKACGALYWIRFGKGVHGYVVKMGLD-GCVFV 60
Query: 151 VAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGL 210
++LIDM KCG + A K+F+ M ++++ ++ SMI G +G +A+ +F M E +
Sbjct: 61 SSSLIDMYGKCGILMDARKVFDAMRQKNVVTWNSMIMGYVQNGLYLEAIKVFANMRLEDI 120
Query: 211 IPDNAAFTVILTACSHGRLVEEGKH-YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEA 269
L+A ++ V EGK + +K Y + + +++ S+ G +++A
Sbjct: 121 EYSRVTLLGFLSAAANLGAVTEGKQGHAIAVKGGYEL--DNILGSSILNFYSKVGLIEDA 178
Query: 270 YELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSS-PYVLLSSIYAA 328
EL+ S E W L+ + Y + EL E N + +N V L SI +A
Sbjct: 179 -ELVFSNMAEKDVVTWNLLISS---YLQCELVEKALNMCHLMRFQNMKFDSVTLDSILSA 234
>30155.m001641 pentatricopeptide repeat-containing protein, putative
Length = 352
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 123/270 (45%), Gaps = 40/270 (14%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER---------------- 44
D A++VF +M R+L SWN M+G + G+ A +F +M
Sbjct: 37 DCARKVFDKMLGRSLVSWNTMIGTYTQNGEEQKALGLFLEMQREGNPFSEFTVSTVLCAS 96
Query: 45 -----------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+V T ++D YAK G I +F+ +R A WS
Sbjct: 97 AAKSYTFVCKQLHAFAMKVAMDANVYISTALLDVYAKSGLIKEGIRVFEGMSERTAVTWS 156
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+++GY QN L EAL F + ++ +++ + S+ AC+ + + V + ++
Sbjct: 157 SMVAGYVQNELYEEALASFNRARAIGLEYNQFTISSVSCACAGLAASIEGRQVHAVVCKT 216
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
++V ++L+DM AKCG++ A F + + ++ + MI + H ++ + + L
Sbjct: 217 GFG-SNSYVASSLVDMYAKCGSVKEAYIAFLDAQRTNIVLWNVMISAFAKHSHSLEVMIL 275
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
F KM G+ PD + +L+ACSH +++
Sbjct: 276 FEKMQQIGMHPDEVTYVSVLSACSHACIMQ 305
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 114/242 (47%), Gaps = 2/242 (0%)
Query: 29 GDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYA 88
G +A+ + D ++ ++I+ Y+K G I AR +FDK R W+ +I Y
Sbjct: 3 GKACHAQAILHFGLTADTLTSNMLINVYSKCGRIDCARKVFDKMLGRSLVSWNTMIGTYT 62
Query: 89 QNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQT 148
QNG +AL +F M+ E+ + +++ A + + K + + + ++D
Sbjct: 63 QNGEEQKALGLFLEMQREGNPFSEFTVSTVLCASAAKSYTFVCKQLHAFAMKVAMD-ANV 121
Query: 149 HVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE 208
++ AL+D+ AK G + ++FE M +R ++ SM+ G + E+A+ FN+
Sbjct: 122 YISTALLDVYAKSGLIKEGIRVFEGMSERTAVTWSSMVAGYVQNELYEEALASFNRARAI 181
Query: 209 GLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKE 268
GL + + + AC+ EG+ + K + + +VD+ ++ G +KE
Sbjct: 182 GLEYNQFTISSVSCACAGLAASIEGRQ-VHAVVCKTGFGSNSYVASSLVDMYAKCGSVKE 240
Query: 269 AY 270
AY
Sbjct: 241 AY 242
>30174.m008630 pentatricopeptide repeat-containing protein, putative
Length = 478
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 152/348 (43%), Gaps = 69/348 (19%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGD---------LINARKVFDDMPERDVVSFTVM 52
+A ++F +M RN+ +WN ++ GLV G+ +K+ D D ++ V+
Sbjct: 67 DAHKLFDEMTVRNVVTWNTVICGLVNCGNNYKPCLYTGFSYFKKMLLDEVGFDPITLNVL 126
Query: 53 -----------------------------------IDGYAKVGDIASARALFDKAPKRDA 77
+D Y K G AR +FD +D
Sbjct: 127 FRACLELNGIEIGRQLHCLVVKLGFQLNCLVNSALVDLYGKCGLATEARCVFDDVMYKDL 186
Query: 78 FLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY 137
LW+V++S YA N L EAL +F+ M+L N+ D + S++++C+ +G+ +L + +
Sbjct: 187 VLWNVMLSCYALNSLAEEALTVFKLMQLENLIGDGFTFSSMLNSCATLGSWELGRQIHGL 246
Query: 138 LSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQ 197
+ + S D+ V + +++M AK ++ A K F+ M +++ S+ +M+ G ++
Sbjct: 247 ICKLSFDL-DILVASGIVNMYAKNEYIEDARKAFDCMTAKNVVSWNTMVVAYGRQGDGKE 305
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILTACS-----------HGRLVEEGKHYFETMKSKYSM 246
A+ L +ML E PD IL++C H +V+ G F ++ +
Sbjct: 306 AMKLLKEMLLEDFAPDELTLASILSSCGSVSASCEIMQVHVYVVKFGLQSFLSIGNA--- 362
Query: 247 VPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKF 294
M++ S+ G+ A + S+P E + W +L+ F
Sbjct: 363 ---------MINAYSKCGRAASALKSFNSVP-EPNLVTWTSLISGYAF 400
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 100/189 (52%), Gaps = 9/189 (4%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
+ D++ + +++ YAK I AR FD ++ W+ ++ Y + G EA+K+ +
Sbjct: 253 DLDILVASGIVNMYAKNEYIEDARKAFDCMTAKNVVSWNTMVVAYGRQGDGKEAMKLLKE 312
Query: 103 MELMNVKPDEYIMVSLMSACSQVGN----LDLAKWVDCYLSQSSIDIGQTHVVAALIDMN 158
M L + PDE + S++S+C V + + +V + QS + IG A+I+
Sbjct: 313 MLLEDFAPDELTLASILSSCGSVSASCEIMQVHVYVVKFGLQSFLSIGN-----AMINAY 367
Query: 159 AKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFT 218
+KCG A K F +P+ +L ++ S+I G + + + + +F KML+ G+ PD AF
Sbjct: 368 SKCGRAASALKSFNSVPEPNLVTWTSLISGYAFNSLPKDGIKMFEKMLSAGVRPDQIAFL 427
Query: 219 VILTACSHG 227
+L+ACSH
Sbjct: 428 GVLSACSHA 436
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 78/178 (43%), Gaps = 39/178 (21%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERD--------------- 45
++A++ F M +N+ SWN MV + GD A K+ +M D
Sbjct: 273 EDARKAFDCMTAKNVVSWNTMVVAYGRQGDGKEAMKLLKEMLLEDFAPDELTLASILSSC 332
Query: 46 ---------------VVSF---------TVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
VV F MI+ Y+K G ASA F+ P+ + W+
Sbjct: 333 GSVSASCEIMQVHVYVVKFGLQSFLSIGNAMINAYSKCGRAASALKSFNSVPEPNLVTWT 392
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLS 139
LISGYA N LP + +K+F+ M V+PD+ + ++SACS G A V C LS
Sbjct: 393 SLISGYAFNSLPKDGIKMFEKMLSAGVRPDQIAFLGVLSACSHAGCHPQALEVYCMLS 450
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 127/300 (42%), Gaps = 49/300 (16%)
Query: 24 GLVKGGDLINARKVFDDMPERDVVSF-TVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
G ++GG ++A V + +V+S ++D Y K + A LFD+ R+ W+
Sbjct: 28 GFLQGGIQVHAHLV--KLGLYNVLSLQNKILDVYVKCKEFKDAHKLFDEMTVRNVVTWNT 85
Query: 83 LISGYAQNG-----LPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY 137
+I G G F+ M L V D + L AC ++ +++ + + C
Sbjct: 86 VICGLVNCGNNYKPCLYTGFSYFKKMLLDEVGFDPITLNVLFRACLELNGIEIGRQLHCL 145
Query: 138 LSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQ 197
+ + + V +AL+D+ KCG A +F+++ +DL + M+ +++ AE+
Sbjct: 146 VVKLGFQL-NCLVNSALVDLYGKCGLATEARCVFDDVMYKDLVLWNVMLSCYALNSLAEE 204
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILTACS-----------HGRL----------------- 229
A+ +F M E LI D F+ +L +C+ HG +
Sbjct: 205 ALTVFKLMQLENLIGDGFTFSSMLNSCATLGSWELGRQIHGLICKLSFDLDILVASGIVN 264
Query: 230 -------VEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHA 282
+E+ + F+ M +K + + MV R G KEA +LLK M +E A
Sbjct: 265 MYAKNEYIEDARKAFDCMTAK-----NVVSWNTMVVAYGRQGDGKEAMKLLKEMLLEDFA 319
>30131.m006940 pentatricopeptide repeat-containing protein, putative
Length = 1198
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 117/253 (46%), Gaps = 38/253 (15%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV-----VSFTVM----- 52
+++VF +M +RN WN+M+G + K+F M + VM
Sbjct: 625 SRQVFDKMSDRNGICWNSMIGACLITERYDEGVKLFWQMSGEGIRLDRAALLNVMRCVRT 684
Query: 53 --------------------------IDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
I YAK G + AR++FD +D W+ +I
Sbjct: 685 ENDGNGVSRVARDAGFNLDQYVQNAAIGMYAKCGRLDLARSIFDGILNKDIVTWANMIEA 744
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVD-CYLSQSSIDI 145
Y Q LP ++L +F+ M L N PD ++S++ AC+ + +L A V +
Sbjct: 745 YTQVDLPLQSLVLFKQMMLQNACPDSVTLLSVVRACTILASLQHAHAVHGIVIVTGGFFN 804
Query: 146 GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM 205
+ V A+ D+ AKCG++ A K+F+ M R++ S+ ++I G +HG+ +A+ LFN+M
Sbjct: 805 SELAVETAVTDLYAKCGSLTYARKVFDRMQNRNIISWSAIISGYGMHGHGREALDLFNEM 864
Query: 206 LNEGLIPDNAAFT 218
+ PD+ AFT
Sbjct: 865 -KASIKPDHIAFT 876
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 94/175 (53%), Gaps = 5/175 (2%)
Query: 49 FTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
FT ++ Y +G I+ A +LF + DAFLW+V+I G+ + +A+ +++ M +++
Sbjct: 508 FTNLVAQYTSLGFISHAYSLFSTSNPTDAFLWNVMIRGFVDHAQYYDAILLYRQMVQLSI 567
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWV--DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDR 166
KP + + + AC + +++ K V D +D+ V+ +LI M A+CG+ +
Sbjct: 568 KPTNFTLTFVFKACGCLRDIEFGKQVHDDAVKDGYKLDL---FVLNSLITMYARCGSYEL 624
Query: 167 ANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVIL 221
+ ++F++M R+ + SMI I ++ V LF +M EG+ D AA ++
Sbjct: 625 SRQVFDKMSDRNGICWNSMIGACLITERYDEGVKLFWQMSGEGIRLDRAALLNVM 679
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 121/283 (42%), Gaps = 30/283 (10%)
Query: 30 DLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
D+ ++V DD + D+ +I YA+ G +R +FDK R+ W+ +I
Sbjct: 586 DIEFGKQVHDDAVKDGYKLDLFVLNSLITMYARCGSYELSRQVFDKMSDRNGICWNSMIG 645
Query: 86 GYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI 145
+E +K+F M ++ D ++++M C + N V + ++
Sbjct: 646 ACLITERYDEGVKLFWQMSGEGIRLDRAALLNVMR-CVRTEND--GNGVSRVARDAGFNL 702
Query: 146 GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM 205
Q +V A I M AKCG +D A +F+ + +D+ ++ +MI+ + Q++ LF +M
Sbjct: 703 DQ-YVQNAAIGMYAKCGRLDLARSIFDGILNKDIVTWANMIEAYTQVDLPLQSLVLFKQM 761
Query: 206 LNEGLIPDNAAFTVILTACS-----------HGRLVEEGKHYFETMKSKYSMVPSPEHYA 254
+ + PD+ ++ AC+ HG ++ G + + +
Sbjct: 762 MLQNACPDSVTLLSVVRACTILASLQHAHAVHGIVIVTGGFFNSELAVE----------T 811
Query: 255 CMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
+ DL ++ G L A ++ M + +W A++ +G
Sbjct: 812 AVTDLYAKCGSLTYARKVFDRMQ-NRNIISWSAIISGYGMHGH 853
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T + D YAK G + AR +FD+ R+ WS +ISGY +G EAL +F M+ ++K
Sbjct: 811 TAVTDLYAKCGSLTYARKVFDRMQNRNIISWSAIISGYGMHGHGREALDLFNEMK-ASIK 869
Query: 110 PD------EYIM 115
PD EYI+
Sbjct: 870 PDHIAFTNEYIL 881
>30169.m006320 pentatricopeptide repeat-containing protein, putative
Length = 922
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 159/345 (46%), Gaps = 56/345 (16%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVF---------------------- 38
++A VF +M ER+L SWN+M+ + G ++A K+F
Sbjct: 569 EHADLVFQKMAERDLISWNSMLACYAQDGKSLDALKIFTRIFHMKKGANFVTFTSALAAC 628
Query: 39 ---DDMPERDVVSFTVMIDG--------------YAKVGDIASARALFDKAPKRDAFLWS 81
D + E ++ V++ G YAK G A+ +F +RD W+
Sbjct: 629 SDPDFIAEGRILHALVILTGLHESLIVSNALVTLYAKSGTTIEAKKVFQMMSRRDEVTWN 688
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNL----DLAKW---V 134
LI G+A N +EA+K F+ M E I S ++ + +G L DL K +
Sbjct: 689 ALIGGHANNRESDEAVKAFKLMR-------EDIPASYITIANVLGALLAPTDLLKHGMPI 741
Query: 135 DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGY 194
Y ++ Q +V +LI M AKCG+++ +N +F+ + ++ ++ +++ + HG
Sbjct: 742 HAYTVMIGLESDQ-YVQNSLITMYAKCGDLNSSNCIFDGLINKNAVAWNTVMAANAYHGQ 800
Query: 195 AEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYA 254
E+++ L KM + G+ D +F+ L+A + ++EEG+ +++ K P
Sbjct: 801 MEESLKLLVKMRHAGVDLDQFSFSGCLSATATLAMLEEGQQ-LQSLAVKLGFDSDPFVTN 859
Query: 255 CMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
++D+ ++ G+L + ++ P+E +W L+ + +G E
Sbjct: 860 ALMDMYAKCGELDDVLRIIPQ-PLERSRLSWNTLISSFARHGNFE 903
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 112/252 (44%), Gaps = 40/252 (15%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVF----DDMPERDVV----------- 47
AK+VF M R+ +WNA++GG + A K F +D+P +
Sbjct: 672 AKKVFQMMSRRDEVTWNALIGGHANNRESDEAVKAFKLMREDIPASYITIANVLGALLAP 731
Query: 48 -----------SFTVMI-------------DGYAKVGDIASARALFDKAPKRDAFLWSVL 83
++TVMI YAK GD+ S+ +FD ++A W+ +
Sbjct: 732 TDLLKHGMPIHAYTVMIGLESDQYVQNSLITMYAKCGDLNSSNCIFDGLINKNAVAWNTV 791
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
++ A +G E+LK+ M V D++ +SA + + L+ + + +
Sbjct: 792 MAANAYHGQMEESLKLLVKMRHAGVDLDQFSFSGCLSATATLAMLEEGQQLQSLAVKLGF 851
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
D V AL+DM AKCG +D ++ + +R S+ ++I + HG E+A F+
Sbjct: 852 D-SDPFVTNALMDMYAKCGELDDVLRIIPQPLERSRLSWNTLISSFARHGNFERAKETFH 910
Query: 204 KMLNEGLIPDNA 215
+ML G+ PD+
Sbjct: 911 EMLKCGVTPDHT 922
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 141/332 (42%), Gaps = 48/332 (14%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVF----------------------- 38
NA+RVF +M ++N+ SW A++ GD + ++
Sbjct: 368 NARRVFNEMLDKNVVSWTALMVAYSDFGDPMEVMNIYCEMRCEGLSGNANTLATVISSCA 427
Query: 39 ---DDMPERDVVSFTV-------------MIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
D+ ++ + +I + G A +F + D W+
Sbjct: 428 SLEDEFLGHQILGHVIKSGLGTNVSVENSLISMFGSFGRAQEACYIFGGMNEHDIISWNS 487
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+IS Y QNGL E+L+ F M+ ++ + + +L+S C V NL + + + +
Sbjct: 488 MISVYVQNGLFEESLRCFYWMQHVHNHINSTTLSTLLSECGSVDNLKWGRGIHSLVIKFG 547
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+D + LI M + G + A+ +F++M +RDL S+ SM+ + G + A+ +F
Sbjct: 548 MD-SNICICNTLIAMYSGAGKSEHADLVFQKMAERDLISWNSMLACYAQDGKSLDALKIF 606
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--HYFETMKSKY-SMVPSPEHYACMVDL 259
++ + + FT L ACS + EG+ H + + S++ S +V L
Sbjct: 607 TRIFHMKKGANFVTFTSALAACSDPDFIAEGRILHALVILTGLHESLIVSN----ALVTL 662
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
++SG EA ++ + M + W AL+G
Sbjct: 663 YAKSGTTIEAKKVFQMMSRRDEVT-WNALIGG 693
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 87/184 (47%), Gaps = 18/184 (9%)
Query: 51 VMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKP 110
+I+ Y+K G I AR +FD+ +++ W+ +IS Y GL E++ +F M + +KP
Sbjct: 253 TLINMYSKFGYICLARYVFDEMSEKNEASWNHIISAYLHAGLYRESIGLFNDMRDLGIKP 312
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQS------SIDIG---QTHVVAALIDMNAKC 161
+ SL++AC + G C LS+ + G V +L+
Sbjct: 313 TGFAFASLVTACDRSG---------CMLSEGIQVHDLIVKFGMLCDVFVGTSLLHFYGTY 363
Query: 162 GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVIL 221
G A ++F EM +++ S+ +++ S G + + ++ +M EGL + ++
Sbjct: 364 GLAFNARRVFNEMLDKNVVSWTALMVAYSDFGDPMEVMNIYCEMRCEGLSGNANTLATVI 423
Query: 222 TACS 225
++C+
Sbjct: 424 SSCA 427
>29634.m002110 pentatricopeptide repeat-containing protein, putative
Length = 418
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 104/205 (50%), Gaps = 15/205 (7%)
Query: 46 VVSFTVMIDGYAKVGDIASARALFDKAPKR-DAFLWSVLISGYAQNGLPNEALKIFQGME 104
VV T +ID Y+ VG + A +F R D + + LI+G QN EA I + M
Sbjct: 214 VVLGTALIDFYSTVGYVDEALKVFSSLSWRTDDVICNSLIAGCVQNKRFEEAFSIMRTM- 272
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG---QTHVVAALIDMNAKC 161
+P+ + S + ACS+ L W + ++I G T + LIDM AKC
Sbjct: 273 ----RPNAVALTSALVACSENSVL----WNGVQIHCAAIRFGFTSDTQLCNKLIDMYAKC 324
Query: 162 GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM--LNEGLIPDNAAFTV 219
G + A +F+ + ++D+ S+ SMI HG +A+ LF KM L + P++ F
Sbjct: 325 GKILNARSVFDGIFRKDVVSWTSMIDAYGRHGNGYEALELFKKMGLLGNMVSPNSITFLA 384
Query: 220 ILTACSHGRLVEEGKHYFETMKSKY 244
+L+AC H LVEEG+ F+ ++ KY
Sbjct: 385 VLSACGHAGLVEEGRELFDLVRKKY 409
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 110/261 (42%), Gaps = 33/261 (12%)
Query: 32 INARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNG 91
++ +FD+ P R + S + ++++GD + ALF +
Sbjct: 29 VHTHHLFDEFPHRSLYSLNSQLASFSRLGDFLATWALFYR-------------------- 68
Query: 92 LPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVV 151
M + D Y ++SACS + + K V + ++ D+G
Sbjct: 69 -----------MHCACLDLDAYTFTPVLSACSALPGAERGKQVHALMIKAGTDLGPI-AK 116
Query: 152 AALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLI 211
ALIDM +K G + + K FEE+ RD+ ++ S++ HG + +A+G+F M EG+
Sbjct: 117 TALIDMYSKYGYLGDSVKAFEEVEFRDVVTWNSLLSSFLRHGLSNKALGIFGAMRREGVE 176
Query: 212 PDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYE 271
+L AC+ + +GK + ++++ A ++D S G + EA +
Sbjct: 177 FSEFTLCSVLKACAAVKAFSQGKQVHGLVGLSWAVIWVVLGTA-LIDFYSTVGYVDEALK 235
Query: 272 LLKSMPVESHASAWGALLGAC 292
+ S+ + +L+ C
Sbjct: 236 VFSSLSWRTDDVICNSLIAGC 256
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 123/298 (41%), Gaps = 46/298 (15%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T +ID Y+K G + + F++ RD W+ L+S + ++GL N+AL IF M V+
Sbjct: 117 TALIDMYSKYGYLGDSVKAFEEVEFRDVVTWNSLLSSFLRHGLSNKALGIFGAMRREGVE 176
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
E+ + S++ AC+ V K V + S I + ALID + G +D A K
Sbjct: 177 FSEFTLCSVLKACAAVKAFSQGKQVHGLVGLSWAVIWVV-LGTALIDFYSTVGYVDEALK 235
Query: 170 LFEEMPKRDLFSYC-SMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGR 228
+F + R C S+I G + E+A + M P+ A T L ACS
Sbjct: 236 VFSSLSWRTDDVICNSLIAGCVQNKRFEEAFSIMRTMR-----PNAVALTSALVACSENS 290
Query: 229 LVEEG--------KHYFET----------MKSKYSMVPSPE------------HYACMVD 258
++ G + F + M +K + + + M+D
Sbjct: 291 VLWNGVQIHCAAIRFGFTSDTQLCNKLIDMYAKCGKILNARSVFDGIFRKDVVSWTSMID 350
Query: 259 LLSRSGQLKEAYELLKSMP-----VESHASAWGALLGACKFYGEVELGEIVANRLFEL 311
R G EA EL K M V ++ + A+L AC G VE G LF+L
Sbjct: 351 AYGRHGNGYEALELFKKMGLLGNMVSPNSITFLAVLSACGHAGLVEEGR----ELFDL 404
>30128.m008896 pentatricopeptide repeat-containing protein, putative
Length = 459
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 83/141 (58%)
Query: 29 GDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYA 88
G L +++KVFD+M ERD + + +MI GY + GD+ LF K +R W+++IS A
Sbjct: 314 GLLEDSKKVFDEMRERDSIVWNLMIRGYCRRGDVNMGLYLFRKMSERSVVSWNIMISCLA 373
Query: 89 QNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQT 148
Q+G +EAL++F M+ KPDE +V+++ C+++ + + +W+ Y + +
Sbjct: 374 QSGRDSEALRLFHEMQDEGFKPDEATVVTVLPICARLEAVSVGQWIQSYAESTGLYGDFV 433
Query: 149 HVVAALIDMNAKCGNMDRANK 169
V AL+D +KCG ++ A +
Sbjct: 434 SVGNALVDFYSKCGMLETARR 454
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 107/255 (41%), Gaps = 56/255 (21%)
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
A +F ++ + ++ ++ GY+ G E+L F M+ + PDEY L+ ACS
Sbjct: 218 ANRVFLQSVNPNILPFNAMVKGYSLCGPFEESLSFFSSMKRRGIWPDEYTFAPLLKACSS 277
Query: 125 VGNLDLAKWV---------DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
+ +L L + + +C+ SI IG ++++ A CG ++ + K+F+EM
Sbjct: 278 LYDLKLGQCIHKDVIMIGFECF---CSIQIG-------VVELYANCGLLEDSKKVFDEMR 327
Query: 176 KRD-------LFSYCS------------------------MIQGLSIHGYAEQAVGLFNK 204
+RD + YC MI L+ G +A+ LF++
Sbjct: 328 ERDSIVWNLMIRGYCRRGDVNMGLYLFRKMSERSVVSWNIMISCLAQSGRDSEALRLFHE 387
Query: 205 MLNEGLIPDNAAFTVILTACSHGRLVEEG---KHYFETMKSKYSMVPSPEHYACMVDLLS 261
M +EG PD A +L C+ V G + Y E+ V +VD S
Sbjct: 388 MQDEGFKPDEATVVTVLPICARLEAVSVGQWIQSYAESTGLYGDFVSVGN---ALVDFYS 444
Query: 262 RSGQLKEAYELLKSM 276
+ G L+ A LK+
Sbjct: 445 KCGMLETARRDLKAF 459
>29851.m002437 pentatricopeptide repeat-containing protein, putative
Length = 1157
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 101/184 (54%), Gaps = 2/184 (1%)
Query: 48 SFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN 107
S + MI GY+ G++A AR LFD +++A +W+ L +GY + ++F
Sbjct: 799 STSSMIVGYSLQGNMAEARRLFDSLEEKNAIVWTALFTGYVKLQHCEAIFELFSEFRSKE 858
Query: 108 -VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDR 166
+ PD I++S++ AC+ L K + Y+ + I + + + A++DM +K G+
Sbjct: 859 AMVPDSLILISVLGACALEAALSPGKQIHGYVFRMGITMDK-KMSTAMVDMYSKSGSTAY 917
Query: 167 ANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH 226
A K+F+ + +RD Y M+ G + +G+ +A+ LF +ML +G+ P+ F +L+AC H
Sbjct: 918 AEKVFQNVNERDSILYNVMMAGYAHNGHEIEAIQLFQEMLEKGVRPNVVTFVALLSACRH 977
Query: 227 GRLV 230
LV
Sbjct: 978 CGLV 981
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 161/365 (44%), Gaps = 75/365 (20%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N ++ K G AR +FD+MPE++V S+ +I + + ++ A+A+FD A RD
Sbjct: 501 NKLIHLYSKHGLAREARNLFDEMPEKNVFSWNAIISAHIRTHNLTQAKAIFDSASVRDLV 560
Query: 79 LWSVLISGYAQ-NGLPNEALKIFQGM--ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVD 135
+++++SGY + +G + AL +F+ M V DE+ + +++ +++ L + V
Sbjct: 561 TYNLMLSGYVRVDGCESYALDLFKEMPRNRSKVGIDEFSLTTMVKLFAKLSMLCHGRQVH 620
Query: 136 CYLSQSSIDIGQTHVVAALIDMNAKC--------------------------------GN 163
Y+ +++ D V++LIDM +KC G
Sbjct: 621 SYMVKTAND-KSGFAVSSLIDMYSKCGCFKAALEVFKGCERVVDLVSKNAMVAACCREGE 679
Query: 164 MDRANKLF-EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
MD A KLF E D S+ ++I G +GYA ++ F +M++ G++ + F +L+
Sbjct: 680 MDLALKLFWRENELNDTVSWNTLISGYVQNGYAVESFKSFVRMMDNGVMWNEHTFASLLS 739
Query: 223 ACSHGRLVEEGKH-----------------------YFETMKSKY-------SMVPSPEH 252
ACS R ++ GK Y + KY S + SP
Sbjct: 740 ACSGLRNLKLGKEIHACVLKNGMDSNPYIESGIIDVYCKCGNVKYAESIYLGSRIGSPFS 799
Query: 253 YACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELE 312
+ M+ S G + EA L S+ E +A W AL F G V+L A +FEL
Sbjct: 800 TSSMIVGYSLQGNMAEARRLFDSLE-EKNAIVWTAL-----FTGYVKLQHCEA--IFELF 851
Query: 313 PENSS 317
E S
Sbjct: 852 SEFRS 856
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 49/272 (18%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPK-RDAFLWSVLISGYAQNGLPNEALKIFQGM 103
D+VS M+ + G++ A LF + + D W+ LISGY QNG E+ K F M
Sbjct: 663 DLVSKNAMVAACCREGEMDLALKLFWRENELNDTVSWNTLISGYVQNGYAVESFKSFVRM 722
Query: 104 ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGN 163
V +E+ SL+SACS + NL L K + + ++ +D ++ + +ID+ KCGN
Sbjct: 723 MDNGVMWNEHTFASLLSACSGLRNLKLGKEIHACVLKNGMD-SNPYIESGIIDVYCKCGN 781
Query: 164 -------------------------------MDRANKLFEEMPKRDLFSYCSMIQGLSIH 192
M A +LF+ + +++ + ++ G
Sbjct: 782 VKYAESIYLGSRIGSPFSTSSMIVGYSLQGNMAEARRLFDSLEEKNAIVWTALFTGYVKL 841
Query: 193 GYAEQAVGLFNKMLN-EGLIPDNAAFTVILTACSHGRLVEEGK----HYFE---TMKSKY 244
+ E LF++ + E ++PD+ +L AC+ + GK + F TM K
Sbjct: 842 QHCEAIFELFSEFRSKEAMVPDSLILISVLGACALEAALSPGKQIHGYVFRMGITMDKKM 901
Query: 245 SMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
S MVD+ S+SG A ++ +++
Sbjct: 902 S--------TAMVDMYSKSGSTAYAEKVFQNV 925
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T M+D Y+K G A A +F +RD+ L++V+++GYA NG EA+++FQ M V+
Sbjct: 903 TAMVDMYSKSGSTAYAEKVFQNVNERDSILYNVMMAGYAHNGHEIEAIQLFQEMLEKGVR 962
Query: 110 PDEYIMVSLMSACSQVGNLDL 130
P+ V+L+SAC G + L
Sbjct: 963 PNVVTFVALLSACRHCGLVGL 983
>29736.m002059 pentatricopeptide repeat-containing protein, putative
Length = 330
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 92/166 (55%), Gaps = 3/166 (1%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
E DV +I YA G A+ +FDK P R W+ +I Q G + ALK+F
Sbjct: 163 ESDVYINNSLIHFYASCGCSEPAQYVFDKMPARSLVSWNAMIDALVQFGEFDAALKLFVQ 222
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY-LSQSSIDIGQTHVV-AALIDMNAK 160
++ + +PD Y M S+++AC+ + L L WV Y L + +++ +V L+DM K
Sbjct: 223 LQEL-FEPDGYTMQSVLNACAGLCALSLGMWVHAYMLRKFDVEVTLDVLVDNCLLDMYCK 281
Query: 161 CGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
CG++D A ++FE M KRD+ S+ SMI G ++HG AE F+ M+
Sbjct: 282 CGSLDIAMQVFERMHKRDITSWNSMILGFAMHGKAELTFEYFDCMV 327
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 118/252 (46%), Gaps = 7/252 (2%)
Query: 53 IDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQN-GLPNEALKIFQGM-ELMNVKP 110
I ++ D+ A LF K +AF+W+ LI A++ ++ +++ M E V P
Sbjct: 70 ILHFSSFNDLDYAYRLFSKFDNPNAFMWNTLIRACARSYDRKEQSFLLYKRMIEQGAVLP 129
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
D++ ++ AC+ + L+ K V + + + ++ +LI A CG + A +
Sbjct: 130 DKHTYPFVLKACAYLFALNEGKQVHAQMLKHGFE-SDVYINNSLIHFYASCGCSEPAQYV 188
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLV 230
F++MP R L S+ +MI L G + A+ LF + L E PD +L AC+ +
Sbjct: 189 FDKMPARSLVSWNAMIDALVQFGEFDAALKLFVQ-LQELFEPDGYTMQSVLNACAGLCAL 247
Query: 231 EEGKHYFETMKSKYSMVPSPEHYA--CMVDLLSRSGQLKEAYELLKSMPVESHASAWGAL 288
G M K+ + + + C++D+ + G L A ++ + M + ++W ++
Sbjct: 248 SLGMWVHAYMLRKFDVEVTLDVLVDNCLLDMYCKCGSLDIAMQVFERMH-KRDITSWNSM 306
Query: 289 LGACKFYGEVEL 300
+ +G+ EL
Sbjct: 307 ILGFAMHGKAEL 318
>27847.m000123 pentatricopeptide repeat-containing protein, putative
Length = 701
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 145/277 (52%), Gaps = 18/277 (6%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALF 69
++ S+ ++ G+VK GDL+ A KVFD+M R DV + ++IDG+ K GD + ++
Sbjct: 185 DVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIW 244
Query: 70 DKAPKR-----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
++ K + ++++I+G + G +E+L+I++ M + D + SL+ +
Sbjct: 245 ERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCE 304
Query: 125 VGNLDLAKWVDCYLSQSSIDI-GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRD---LF 180
GN+D A V + +SS+ + TH A+++ + G + + +L+ M K + +
Sbjct: 305 AGNIDGAVRVYKEIVESSLVVDAVTH--NAMLNGFCRAGKIKESFELWMVMGKENCQTVV 362
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHGRLVEEGKHYFET 239
SY +I+GL +G E+A+ ++ + +G P++ + V++ C +GRL + K + E
Sbjct: 363 SYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEA 422
Query: 240 MKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
+ Y+ MVD L + G++ EA ++ M
Sbjct: 423 EDGPGKL--DAYAYSSMVDGLCKEGRMDEAISIVNQM 457
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 119/276 (43%), Gaps = 48/276 (17%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARA 67
E+++ ++++++ GL + G++ A +V+ ++ E D V+ M++G+ + G I +
Sbjct: 289 EKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFE 348
Query: 68 LF---DKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
L+ K + +++LI G +NG EA+ I++ + +P
Sbjct: 349 LWMVMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRP-------------- 394
Query: 125 VGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP----KRDLF 180
++ LI K G +++A K+F+E K D +
Sbjct: 395 ----------------------ESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAY 432
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
+Y SM+ GL G ++A+ + N+M G D ++ +E+ ++F M
Sbjct: 433 AYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREM 492
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
+ K P+ Y ++ L ++ + EAY +K M
Sbjct: 493 ECK-GCSPTIVSYNTLIKGLCKAERFSEAYSFVKEM 527
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 119/241 (49%), Gaps = 17/241 (7%)
Query: 44 RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM 103
R + + + ++ +++ DI A+ K P ++ +V I YA+N + N+AL FQ M
Sbjct: 52 RRLAADSRLVSHVSRIVDIVKAQ----KCPCKEDVALTV-IKAYAKNKMSNKALDTFQNM 106
Query: 104 E-LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG---QTHVVAALIDMNA 159
+ + KP +L++A ++ D A+ Y S+D+ QT+ + LI ++
Sbjct: 107 QDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYF--ESMDVSPNLQTYNI--LIKISC 162
Query: 160 KCGNMDRANKLFEEM----PKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNA 215
K +++A L + M K D+FSY ++I G+ G A+ +F++M G++ D
Sbjct: 163 KKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVT 222
Query: 216 AFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKS 275
+ +++ ++GK +E + S+ P+ Y M++ L + G+ E+ E+ +
Sbjct: 223 CYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWER 282
Query: 276 M 276
M
Sbjct: 283 M 283
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 103/244 (42%), Gaps = 17/244 (6%)
Query: 1 DNAKRVFVQMPERNLT----SWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVM 52
D A + QM +R N ++ G V+ L +A F +M + +VS+ +
Sbjct: 448 DEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTL 507
Query: 53 IDGYAKVGDIASA----RALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
I G K + A + + +K K D S+L+ G Q AL ++Q
Sbjct: 508 IKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGF 567
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
KPD + LM V L+ A + ++ +S+ + L++ K + ++A+
Sbjct: 568 KPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTC-VPNLVTRNTLMEGLYKVRDYEKAS 626
Query: 169 KLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
++++ + K D+ SY I+GL A+ N LN G++P + +++ A
Sbjct: 627 EIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRAA 686
Query: 225 SHGR 228
+ R
Sbjct: 687 VNFR 690
>30157.m000797 pentatricopeptide repeat-containing protein, putative
Length = 344
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 101/184 (54%), Gaps = 8/184 (4%)
Query: 34 ARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLP 93
AR VFD + ++ VS+T MI GYAK G A LF P ++ + W+ LISG Q+G
Sbjct: 159 ARAVFDSILAKNAVSWTAMISGYAKSGLKVEAMELFSSFPVKNLYSWTALISGLVQSGKG 218
Query: 94 NEALKIFQGMELMNVK-PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQ---TH 149
+ +F M + D ++ S++ AC+ + L+ K + + I +G
Sbjct: 219 IDGCYLFLEMRREGIDIIDPLVLSSVVGACANLAVLEFGKQLHGLI----IALGYESCLF 274
Query: 150 VVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEG 209
+ AL+DM AKC ++ A ++F+ M +D+ S+ S+I G + HG A++A+ L++ M+ G
Sbjct: 275 ISNALVDMYAKCSDILAAKEIFDRMIYKDVVSWTSIIVGAAQHGRAKEALDLYDDMVLAG 334
Query: 210 LIPD 213
+ P+
Sbjct: 335 VKPN 338
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 126/282 (44%), Gaps = 47/282 (16%)
Query: 51 VMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN-VK 109
+++ Y K G + A LF++ P+RD W+ +++ Y LPN+ L IF M +++ ++
Sbjct: 43 TLLNAYGKCGLLQDAYFLFEEMPQRDHVSWASILTAYNLANLPNKTLSIFPTMFIVDKLE 102
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG--NMDR- 166
PD ++ +L+ AC+ + + K V S V ++LIDM AKCG + R
Sbjct: 103 PDHFVYATLVKACASLCAVRQGKQVHARFVLSPFSDDDV-VKSSLIDMYAKCGLPKIARA 161
Query: 167 ----------------------------ANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
A +LF P ++L+S+ ++I GL G
Sbjct: 162 VFDSILAKNAVSWTAMISGYAKSGLKVEAMELFSSFPVKNLYSWTALISGLVQSGKGIDG 221
Query: 199 VGLFNKMLNEGL-IPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYAC-- 255
LF +M EG+ I D + ++ AC++ ++E GK + ++ + + +C
Sbjct: 222 CYLFLEMRREGIDIIDPLVLSSVVGACANLAVLEFGKQL-------HGLIIALGYESCLF 274
Query: 256 ----MVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACK 293
+VD+ ++ + A E+ M + S ++GA +
Sbjct: 275 ISNALVDMYAKCSDILAAKEIFDRMIYKDVVSWTSIIVGAAQ 316
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 40/150 (26%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER--DVVSFTVM-------- 52
A +F P +NL SW A++ GLV+ G I+ +F +M D++ V+
Sbjct: 190 AMELFSSFPVKNLYSWTALISGLVQSGKGIDGCYLFLEMRREGIDIIDPLVLSSVVGACA 249
Query: 53 ------------------------------IDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+D YAK DI +A+ +FD+ +D W+
Sbjct: 250 NLAVLEFGKQLHGLIIALGYESCLFISNALVDMYAKCSDILAAKEIFDRMIYKDVVSWTS 309
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDE 112
+I G AQ+G EAL ++ M L VKP+E
Sbjct: 310 IIVGAAQHGRAKEALDLYDDMVLAGVKPNE 339
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 98/200 (49%), Gaps = 14/200 (7%)
Query: 153 ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM-LNEGLI 211
L++ KCG + A LFEEMP+RD S+ S++ ++ + + +F M + + L
Sbjct: 43 TLLNAYGKCGLLQDAYFLFEEMPQRDHVSWASILTAYNLANLPNKTLSIFPTMFIVDKLE 102
Query: 212 PDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEH---YACMVDLLSRSGQLKE 268
PD+ + ++ AC+ V +GK + +++ + P + + ++D+ ++ G K
Sbjct: 103 PDHFVYATLVKACASLCAVRQGKQ----VHARFVLSPFSDDDVVKSSLIDMYAKCGLPKI 158
Query: 269 AYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEP-ENSSPYVLLSSIYA 327
A + S+ + +A +W A++ Y + L ++ A LF P +N + L S
Sbjct: 159 ARAVFDSI-LAKNAVSWTAMISG---YAKSGL-KVEAMELFSSFPVKNLYSWTALISGLV 213
Query: 328 AADQWLDVSHVKNKMKERGL 347
+ + +D ++ +M+ G+
Sbjct: 214 QSGKGIDGCYLFLEMRREGI 233
>27985.m000884 pentatricopeptide repeat-containing protein, putative
Length = 504
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 23/306 (7%)
Query: 4 KRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKV 59
+R+ ++ N ++ ++ L K G I K+F +M +V+ ++ +I+G +V
Sbjct: 68 RRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRV 127
Query: 60 GDIASARALFD----KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
G + A LFD + K + ++ LI + GL EA + F M + PD
Sbjct: 128 GKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTF 187
Query: 116 VSLMSACSQVGNLDLA-KWVDCYLSQSSIDIGQTHVVAALIDMNAKC--GNMDRANKLFE 172
+L+ S+ G + A K + + Q ++V +N C MD A +LFE
Sbjct: 188 TTLIDHLSKKGKVQEAYKIFELMIKQGE----APNIVTYNSLLNGLCLHHQMDHAVRLFE 243
Query: 173 EMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGR 228
M +R D+ SY ++I G G E+A+ LF KM E L P +T++L A
Sbjct: 244 VMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNG 303
Query: 229 LVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYEL---LKSMPVESHASAW 285
+ K F M+ PS + Y ++D L ++G ++EA ++ LKS+ + +
Sbjct: 304 RIRTAKELFNNMQI-CGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIY 362
Query: 286 GALLGA 291
L+G
Sbjct: 363 SILIGG 368
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 116/277 (41%), Gaps = 44/277 (15%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
++V+ + ++ G G + A LFDK R F +L+ GY N L + + + +E
Sbjct: 8 NLVTVSTLVKGMCFEGKVMDALELFDKMT-RSGFQGDILLYGYLINAL-RKTRQARRAVE 65
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
L E CS G +ID K G
Sbjct: 66 LHRRMLSE--------ICS----------------------GNFFTYGLVIDSLCKDGLA 95
Query: 165 DRANKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVI 220
+ K+F EM ++ Y S+I GL G +AV LF++M+++G+ + + +
Sbjct: 96 IKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSL 155
Query: 221 LTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVES 280
+ A L +E F M + ++P + ++D LS+ G+++EAY++ + M +
Sbjct: 156 IHASCRFGLWKEATRTFSQMVGE-GILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQG 214
Query: 281 HAS---AWGALLGACKFYGEVELGEIVANRLFELEPE 314
A + +LL + +++ A RLFE+ E
Sbjct: 215 EAPNIVTYNSLLNGLCLHHQMDH----AVRLFEVMVE 247
>30147.m014200 pentatricopeptide repeat-containing protein, putative
Length = 461
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 125/252 (49%), Gaps = 31/252 (12%)
Query: 56 YAKVGDIASARALFDKAPKRD--AFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEY 113
YA G + A +FD+ RD AF W+ LI+GY++ GL +A+ ++ M+ V+PDE+
Sbjct: 138 YASCGYMDEAHQMFDEMSNRDESAFAWNSLIAGYSELGLYEDAIALYFQMDEEYVEPDEF 197
Query: 114 IMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG---QTHVVAALIDMNAKCGNMDRANKL 170
++ AC +G + + + V L I +G AL+DM AKCG++ +A +
Sbjct: 198 TFPRVLKACGGLGLIQVGEAVHRDL----IRLGFANDRFASNALVDMYAKCGDIVKARSI 253
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS----- 225
FE+M +D S+ SM+ G HG +A +ML +GL D+ A + +L S
Sbjct: 254 FEKMASKDSVSWNSMLTGYVRHGLIIEAFHTGRRMLQDGLELDSVAISSLLANVSSFKLG 313
Query: 226 ---HGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHA 282
HG ++ G M+ S+ S ++ + S +G+L + L +M E
Sbjct: 314 VQIHGWILRRG------MQWDLSIANS------LIVMYSSNGKLVQTRWLFDNMQ-ERDV 360
Query: 283 SAWGALLGA-CK 293
+W +++ A CK
Sbjct: 361 VSWNSIISAHCK 372
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 10/214 (4%)
Query: 24 GLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
GL++ G+ ++ R + D + ++D YAK GDI AR++F+K +D+ W+ +
Sbjct: 210 GLIQVGEAVH-RDLIRLGFANDRFASNALVDMYAKCGDIVKARSIFEKMASKDSVSWNSM 268
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVG-NLDLAKWVDCYLSQSS 142
++GY ++GL EA + M ++ D + SL++ S + + W+ Q
Sbjct: 269 LTGYVRHGLIIEAFHTGRRMLQDGLELDSVAISSLLANVSSFKLGVQIHGWILRRGMQWD 328
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ I + LI M + G + + LF+ M +RD+ S+ S+I S H Q + F
Sbjct: 329 LSIANS-----LIVMYSSNGKLVQTRWLFDNMQERDVVSWNSII---SAHCKDPQVLAYF 380
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHY 236
+M N G PDN F L+AC+H LV +G+ +
Sbjct: 381 ERMENSGAFPDNITFVSALSACAHLGLVRDGESW 414
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 97/193 (50%), Gaps = 9/193 (4%)
Query: 108 VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRA 167
+K D I+ SL+ C ++ ++D + L +SI T V + L+ + A CG MD A
Sbjct: 89 IKIDTQIISSLLETCYRLNSIDHGMRIH-RLIPTSILRKNTGVSSKLLRLYASCGYMDEA 147
Query: 168 NKLFEEMPKRD--LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS 225
+++F+EM RD F++ S+I G S G E A+ L+ +M E + PD F +L AC
Sbjct: 148 HQMFDEMSNRDESAFAWNSLIAGYSELGLYEDAIALYFQMDEEYVEPDEFTFPRVLKACG 207
Query: 226 HGRLVEEGKHYFETMKSKYSMVPSPEHYA--CMVDLLSRSGQLKEAYELLKSMPVESHAS 283
L++ G+ + + + + +A +VD+ ++ G + +A + + M + S
Sbjct: 208 GLGLIQVGEAVHRDL---IRLGFANDRFASNALVDMYAKCGDIVKARSIFEKMASKDSVS 264
Query: 284 AWGALLGACKFYG 296
W ++L +G
Sbjct: 265 -WNSMLTGYVRHG 276
>29491.m000089 pentatricopeptide repeat-containing protein, putative
Length = 226
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 27/237 (11%)
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
++ Y N +A+K+F M V+ + +VS++SAC +G LD KW+ ++Q I
Sbjct: 1 MAAYEGNNARRDAIKLFLRMLCKKVEYEYITIVSVISACISLGALDTGKWLLELIAQKGI 60
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLS--IHGYAEQAVGL 201
+ ++ ALI+ KCG ++ A +FE +P R +G + I Y Q+
Sbjct: 61 ET-SVPIMNALINKYLKCGCIELAKDIFERLPHRTRIQ-----EGKTAVISNYCSQS--- 111
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
+K + E +I V K K +S+ +Y+ LL
Sbjct: 112 GSKEVLEAVIAGTNE-------------VAGKKEELSMGKDSFSIAELVIYYS---YLLG 155
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
+G L EAYE ++MP+ + WGALLGAC+ + VEL E+V L +L+P++ P
Sbjct: 156 IAGCLIEAYEFFQNMPIAPDSGIWGALLGACRIHSNVELAELVTKELLQLDPQSVIP 212
>29825.m000331 pentatricopeptide repeat-containing protein, putative
Length = 684
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 4/213 (1%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N ++ K ++ + + VF + DV S+ ++ AK+G + A LFD P+RD
Sbjct: 105 NTLLSLYAKAKEIDSVKWVFGETENPDVYSYATLVSACAKLGHVDYACVLFDVMPQRDVV 164
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
+W+ LI+G ++G L F+ M V+ D Y + S++S C V ++ V +
Sbjct: 165 VWNALITGCMESGNEEIGLNYFRDMCRSGVRHDNYSLASVLSGCKLVM-VNFGMQVHSLV 223
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK--RDLFSYCSMIQGLSIHGYAE 196
+S + + V+ ALI M C N+ +FEE RD +Y MI GL G E
Sbjct: 224 IKSG-SLVEPSVINALITMYFNCENVLDGYLVFEEAEDSVRDQITYNVMIDGLVSVGRIE 282
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
+A+ + KML L P+ F ++++C H +
Sbjct: 283 EALIICRKMLGSCLRPNELTFVSLMSSCLHAEI 315
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 120/262 (45%), Gaps = 38/262 (14%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKG-------------------------GDLINARKV 37
A++VF ++ ++ SWN M+ +G G L+ + ++
Sbjct: 351 ARKVFERLERKDPVSWNTMISSYTQGNFGRLAILAYLEMRRTGTEPDEFTFGSLLASSEL 410
Query: 38 FDDMPERDVVSF-----------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
+ + + F + Y+K G++ + +F RD W+ +ISG
Sbjct: 411 LETVEMIHALVFRNSLISNIQVSNALASAYSKHGNMEQSYQIFSDMSFRDLISWNSIISG 470
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG 146
+ NGLP L+ F +++ K +EY + ++S C+ + L K V Y+ +S
Sbjct: 471 FLLNGLPLLGLEKFSELQMSEFKSNEYTLNIILSICASIPALGQGKQVHGYIMRSGFS-S 529
Query: 147 QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
+ + LI AKCG +D ++++F + K+D S+ ++I + HG +A+ F M
Sbjct: 530 EVSLGNGLITFYAKCGLIDWSSRVFTALAKKDTVSWNALISAYAQHGKGNEAIYQFEAMQ 589
Query: 207 NEGLI-PDNAAFTVILTACSHG 227
+ + PD+A F ++L+ACSH
Sbjct: 590 HSSEVQPDDATFKIVLSACSHA 611
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 135/281 (48%), Gaps = 11/281 (3%)
Query: 53 IDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDE 112
I Y+ D+ +AR +F++ ++D W+ +IS Y Q A+ + M +PDE
Sbjct: 339 ITMYSSCKDLHAARKVFERLERKDPVSWNTMISSYTQGNFGRLAILAYLEMRRTGTEPDE 398
Query: 113 YIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFE 172
+ SL+ A S++ L+ + + + ++S+ I V AL +K GNM+++ ++F
Sbjct: 399 FTFGSLL-ASSEL--LETVEMIHALVFRNSL-ISNIQVSNALASAYSKHGNMEQSYQIFS 454
Query: 173 EMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEE 232
+M RDL S+ S+I G ++G + F+++ + +IL+ C+ + +
Sbjct: 455 DMSFRDLISWNSIISGFLLNGLPLLGLEKFSELQMSEFKSNEYTLNIILSICASIPALGQ 514
Query: 233 GKH-YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
GK + M+S +S S + ++ ++ G + + + ++ + S W AL+ A
Sbjct: 515 GKQVHGYIMRSGFSSEVSLGN--GLITFYAKCGLIDWSSRVFTALAKKDTVS-WNALISA 571
Query: 292 CKFYG---EVELGEIVANRLFELEPENSSPYVLLSSIYAAA 329
+G E E++P++++ ++LS+ AA
Sbjct: 572 YAQHGKGNEAIYQFEAMQHSSEVQPDDATFKIVLSACSHAA 612
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 95 EALKIFQGMELMN--VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA 152
+AL +F + + +KPD Y + + ++AC+ + + + Y +SS+ THV
Sbjct: 47 DALHLFDKIRSLYYYLKPDHYTLSTTLTACANLCDTTFGNKLHAYAIKSSLKT-YTHVAN 105
Query: 153 ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIP 212
L+ + AK +D +F E D++SY +++ + G+ + A LF+ M ++
Sbjct: 106 TLLSLYAKAKEIDSVKWVFGETENPDVYSYATLVSACAKLGHVDYACVLFDVMPQRDVVV 165
Query: 213 DNAAFTVILTACSHGRLVEEGKHYFETM 240
NA ++T C E G +YF M
Sbjct: 166 WNA----LITGCMESGNEEIGLNYFRDM 189
>29957.m001429 pentatricopeptide repeat-containing protein, putative
Length = 299
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 99/189 (52%), Gaps = 9/189 (4%)
Query: 33 NARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGL 92
+A VF +MPERD+V+ +I G + + A +F+ +R+ W+ LISG AQN
Sbjct: 91 DAYHVFGEMPERDIVATNSLIYGLCRCHFTSKAIEMFNNMDERNKGSWNSLISGLAQNSK 150
Query: 93 PNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNL----DLAKWVDCYLSQSSIDIGQT 148
+ AL F+ M L K D MVS++S C+++ L + V Y + + +G
Sbjct: 151 ESIALAFFERMRLEGAKVDVITMVSVLSICAELAALINGTKIHGLVIKYGFEFYLPVGN- 209
Query: 149 HVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE 208
A++DM AKCG+M+ A F+++ +++ S+ ++I HG +A+ + M +
Sbjct: 210 ----AIVDMYAKCGSMENACLCFKQLAIKNVVSWTTLIVSYGKHGQGVEALKALDAMERD 265
Query: 209 GLIPDNAAF 217
G+ P+ F
Sbjct: 266 GVTPNKITF 274
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 67/130 (51%), Gaps = 2/130 (1%)
Query: 77 AFLWSVLISGYAQNGLPNEALKI-FQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVD 135
+ L + +I+ G +A+ + F ++ +K ++I ++ AC ++ + + V
Sbjct: 2 SLLHAKMIAALVNKGQSRQAIALLFNELQKTGLKITDFIFSPILRACGKITAVKEGEQVH 61
Query: 136 CYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYA 195
C + + ++ ++IDM +KC ++ A +F EMP+RD+ + S+I GL +
Sbjct: 62 CLILKHGFS-RDVIIMTSVIDMYSKCSAINDAYHVFGEMPERDIVATNSLIYGLCRCHFT 120
Query: 196 EQAVGLFNKM 205
+A+ +FN M
Sbjct: 121 SKAIEMFNNM 130
>30128.m008833 pentatricopeptide repeat-containing protein, putative
Length = 546
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 171/374 (45%), Gaps = 43/374 (11%)
Query: 4 KRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKV 59
K + + E L S+N ++ GL K G L A + +DM R +V+++ +IDGY K+
Sbjct: 152 KEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKM 211
Query: 60 GDIASARALFDKAPKRDAFL--------------WSVLISGYAQNGLPNEALKIFQGMEL 105
G I K K DA L +++LI G+ ++ + A+K+F M
Sbjct: 212 GKIG-------KMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNR 264
Query: 106 MNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGN-- 163
VKP+ SL++ G ++ A + + S + + +++ +N C N
Sbjct: 265 QGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCL---KPNIITHNALLNGFCKNKM 321
Query: 164 MDRANKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTV 219
+ +A +LF++MPK+ ++ +Y +I E A L+ ML +G+ PD + +
Sbjct: 322 VKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNC 381
Query: 220 ILTA-CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPV 278
++ C G L E ++ M +K+ + Y ++D L G++K+A LL M
Sbjct: 382 LIAGLCRKGDL-EAARNLVSEMDTKH-LKADLITYNILIDSLCNKGEMKKALRLLDEMCR 439
Query: 279 E----SHASAWGALLGACKFYGEVELGEIVANRLFEL-EPENSSPYVLLSSIYAAADQWL 333
+ S + + G CK G + + +++ ++ N + Y +L + D+
Sbjct: 440 KGLKPSQLTYNTMIDGYCK-EGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLE 498
Query: 334 DVSHVKNKMKERGL 347
D + + N+M E+GL
Sbjct: 499 DANGLLNEMLEKGL 512
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 13/219 (5%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALF 69
N+ + NA++ G K + A ++FDDMP++ +V ++ ++ID Y K ++ A AL+
Sbjct: 305 NIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALY 364
Query: 70 ----DKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
K D ++ LI+G + G A + M+ ++K D L+ +
Sbjct: 365 RIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNK 424
Query: 126 GNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK----RDLFS 181
G + A + + + + Q +ID K GN+ A L +M K ++ +
Sbjct: 425 GEMKKALRLLDEMCRKGLKPSQL-TYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVAT 483
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVI 220
Y +I+G E A GL N+ML +GLIP+ + ++
Sbjct: 484 YNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIV 522
>29660.m000783 pentatricopeptide repeat-containing protein, putative
Length = 729
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 142/319 (44%), Gaps = 27/319 (8%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALF 69
+ S N ++ G K G + +AR+ DM ++ D++S+ +I G+ ++G+I A L
Sbjct: 341 TVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILL 400
Query: 70 DKAPKRD----AFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
D+ R+ ++ LI G + G ALK+ + M + PD L++ ++
Sbjct: 401 DELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKL 460
Query: 126 GNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR----DLFS 181
GN+ +AK + + Q A ++ K G+ +A KL EEM + D+ +
Sbjct: 461 GNMLMAKEFFDEMLHVGLAPDQFAYTARIVG-ELKLGDTAKAFKLQEEMLTKGFPPDVIT 519
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
Y + GL G E+A L KM+ +G +PD+ +T + A + EG+ F M
Sbjct: 520 YNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDML 579
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP---VESHASAWGALLG-------- 290
S+ P+ Y ++ + +G+L A M V + + L+
Sbjct: 580 SR-GQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKM 638
Query: 291 --ACKFYGEVELGEIVANR 307
ACKF+ E++ I N+
Sbjct: 639 DQACKFFIEMQEKGIFPNK 657
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 141/296 (47%), Gaps = 27/296 (9%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALF 69
N+ ++N ++ GL + GDL A K+ +DM R DVV++TV+++G K+G++ A+ F
Sbjct: 411 NIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFF 470
Query: 70 DK------APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACS 123
D+ AP D F ++ I G + G +A K+ + M PD ++
Sbjct: 471 DEMLHVGLAP--DQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLC 528
Query: 124 QVGNLDLAKWVDCYLSQSSIDIGQT--HVV-AALIDMNAKCGNMDRANKLFEEMPKR--- 177
++GNL+ A L Q I G HV + + + + G++ ++F +M R
Sbjct: 529 KLGNLEEAG----ELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQT 584
Query: 178 -DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHY 236
+ +Y +I +++G + A+ F +M +G++P+ + V++ R +++ +
Sbjct: 585 PTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKF 644
Query: 237 FETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM---PVESHASAWGALL 289
F M+ K + P+ Y +++ G+ +EA L M + + GALL
Sbjct: 645 FIEMQEK-GIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALL 699
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 140/322 (43%), Gaps = 61/322 (18%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDGYAKVGDIASARALF 69
+T++N M+ KGG++ A + M ER V+F V+I+G +K G++ A+ L
Sbjct: 236 TVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLI 295
Query: 70 DKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
+ K + ++ LI GY + GL EAL +++ M V P ++M +
Sbjct: 296 QEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKE 355
Query: 126 GNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNA------KCGNMDRANKLFEEMPKRDL 179
G + A+ Q D+ + +++ +I N + GN+ A L +E+ R+L
Sbjct: 356 GKMSDAR-------QQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNL 408
Query: 180 ----FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT-ACSHGRLVEEGK 234
+Y ++I GL G E A+ L M+N G+ PD +TV++ AC G ++ K
Sbjct: 409 SFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNML-MAK 467
Query: 235 HYFETM-----------------------------KSKYSMV-----PSPEHYACMVDLL 260
+F+ M K + M+ P Y V+ L
Sbjct: 468 EFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGL 527
Query: 261 SRSGQLKEAYELLKSMPVESHA 282
+ G L+EA ELL+ M + H
Sbjct: 528 CKLGNLEEAGELLQKMIRDGHV 549
>29736.m002066 pentatricopeptide repeat-containing protein, putative
Length = 604
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 155/338 (45%), Gaps = 36/338 (10%)
Query: 36 KVFDDMPERDVV----SFTVMIDGYAKVGDIASARALFDKAPKR----DAFLWSVLISGY 87
KVF + P+ V S+ ++++ ++G I A L + + D ++ +I GY
Sbjct: 96 KVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGY 155
Query: 88 AQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQ 147
G + +++ + M+L +KP+ Y S++ + G + + V + + +
Sbjct: 156 CHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGV--FP 213
Query: 148 THVV-AALIDMNAKCGNMDRANKLFEEMPKRDL----FSYCSMIQGLSIHGYAEQAVGLF 202
HV+ LID K GN A KLF EM R++ ++ ++I GLS G +A LF
Sbjct: 214 DHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLF 273
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYF-ETMKSKYSMVPSPEHYACMVDLLS 261
N+M+ +G PD +T ++ + +L E K +F + + P+ Y + D L
Sbjct: 274 NEMIKKGFEPDEVTYTALIDG--YCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLC 331
Query: 262 RSGQLKEAYELLKSM---PVESHASAWGALL-GACKFYGEVELGEIV-ANRLFE------ 310
+SG+L A ELL M ++ + S + ++ G CK G I+ A +L E
Sbjct: 332 KSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCK------AGNILQAVKLMEEMKEAG 385
Query: 311 LEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLR 348
L P+ + Y L Y + + + +M +RGL+
Sbjct: 386 LHPDTIT-YTTLMDAYYKTGEMVKARELLREMLDRGLQ 422
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 110/237 (46%), Gaps = 17/237 (7%)
Query: 1 DNAKRVFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVM 52
D A + +M + N++++N +V GL K G+++ A K+ ++M E D +++T +
Sbjct: 337 DTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTL 396
Query: 53 IDGYAKVGDIASARALF----DKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
+D Y K G++ AR L D+ + ++VL++G +G + ++ + M +
Sbjct: 397 MDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGI 456
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
P+ S+M N+ ++ + + + + ++ LI + K NM A
Sbjct: 457 MPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGV-VPDSNTYNILIKGHCKARNMKEAW 515
Query: 169 KLFEEMPKRDL----FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVIL 221
L +EM ++ SY ++I+G +A LF +M EGL+ + + +
Sbjct: 516 FLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFV 572