Jatropha Genome Database

JcCB0120781.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0120781.10 + phase: 0 
         (130 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29799.m000633 superoxide dismutase [fe], putative                     251   8e-68
30147.m014368 superoxide dismutase [fe], putative                     115   5e-27
29729.m002353 superoxide dismutase [mn], putative                      72   6e-14
29729.m002354 superoxide dismutase [mn], putative                      72   9e-14
33549.m000044 superoxide dismutase [fe], putative                      70   3e-13

>29799.m000633 superoxide dismutase [fe], putative
          Length = 265

 Score =  251 bits (640), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 117/130 (90%), Positives = 122/130 (93%)

Query: 1   MQPGGGEMPELGVLQQIEKDFGSFTNFKEKFVEAALTLFGSGWIWLVLKREERQLAITKT 60
           MQP GGEMPELGVLQQIEKDFGSFTNFKEKF+E ALTLFGSGWIWLVLKREERQLAI KT
Sbjct: 136 MQPAGGEMPELGVLQQIEKDFGSFTNFKEKFIEEALTLFGSGWIWLVLKREERQLAIIKT 195

Query: 61  SNAITPLVWDNIPIICLDMWEHAYYLDYKNDKGSYVNAFMNHLLSWNVAMARMARAEAFV 120
           SNA  PLVWD+IPIICLDMWEHAYYLDYKND+G YVNAFMNHL+SWN  MARMARAEAFV
Sbjct: 196 SNANNPLVWDDIPIICLDMWEHAYYLDYKNDRGKYVNAFMNHLISWNAVMARMARAEAFV 255

Query: 121 NLGDPKIPVA 130
           NLG+PKIPVA
Sbjct: 256 NLGEPKIPVA 265


>30147.m014368 superoxide dismutase [fe], putative
          Length = 305

 Score =  115 bits (289), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 54/124 (43%), Positives = 77/124 (62%), Gaps = 15/124 (12%)

Query: 13  VLQQIEKDFGSFTNFKEKFVEAALTLFGSGWIWLVLK---------------REERQLAI 57
           +LQ IE+DFGSF  F E+F  AA T FGSGW WL  K                E+++L +
Sbjct: 145 LLQLIERDFGSFERFVEEFKAAAATQFGSGWAWLAYKANRLDVENALNPCPSEEDKKLVV 204

Query: 58  TKTSNAITPLVWDNIPIICLDMWEHAYYLDYKNDKGSYVNAFMNHLLSWNVAMARMARAE 117
            K+ NA+ PLVWD  P++ +D+WEHAYYLD++N +  Y++ F+  L+SW    AR+  A+
Sbjct: 205 VKSPNAVIPLVWDYYPLLTIDVWEHAYYLDFQNRRPDYISTFLEKLVSWEAVSARLEAAK 264

Query: 118 AFVN 121
           A V+
Sbjct: 265 AQVS 268


>29729.m002353 superoxide dismutase [mn], putative
          Length = 239

 Score = 72.4 bits (176), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 5/109 (4%)

Query: 4   GGGEMPELGVLQQIEKDFGSFTNFKEKFVEAALTLFGSGWIWLVLKREERQLAITKTSNA 63
           GGG  P   +   I+ +FGS     +K       + GSGW+WL + ++ ++L +  T N 
Sbjct: 122 GGGIPPHGSLASAIDTEFGSLEKLIQKMNAEGAAVEGSGWVWLGVDKDSKKLVVATTQNQ 181

Query: 64  ITPLVWDN---IPIICLDMWEHAYYLDYKNDKGSYVNAFMNHLLSWNVA 109
             PLV      +P++ +D+WEHAYYL YKN +  Y+ +  N +++W  A
Sbjct: 182 -DPLVTKGPTLVPLLGIDVWEHAYYLQYKNVRPDYLKSIWN-VMNWKYA 228


>29729.m002354 superoxide dismutase [mn], putative
          Length = 234

 Score = 71.6 bits (174), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 4/99 (4%)

Query: 1   MQPGGGEMPELGVLQQIEKDFGSFTNFKEKFVEAALTLFGSGWIWLVLKREERQLAITKT 60
           ++ GGGE P   +   I+ DFGS     +K       + GSGW+WL + +  ++L +  T
Sbjct: 114 VREGGGEPPHGSLGWAIDTDFGSLEKLIQKMNTEGAAVQGSGWVWLGVDKASKKLVVETT 173

Query: 61  SNAITPLVWDN---IPIICLDMWEHAYYLDYKNDKGSYV 96
           +N   PLV      +P++ +D+WEHAYYL YKN +  Y+
Sbjct: 174 ANQ-DPLVTKAPTLVPLLGIDVWEHAYYLQYKNVRPDYL 211


>33549.m000044 superoxide dismutase [fe], putative
          Length = 244

 Score = 70.1 bits (170), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 1/113 (0%)

Query: 4   GGGEMPELGVLQQIEKDFGSFTNFKEKFVEAALTLFGSGWIWLVLKREERQLAITKTSNA 63
           G G  P+  + + I+++FGS+  FK + + A + +  SGW  +       +L I +  N 
Sbjct: 126 GKGGEPKGDLAKAIDRNFGSYAKFKGQLIAATVAVEASGWGVVGYHPATGRLMILQCENH 185

Query: 64  ITPLVWDNIPIICLDMWEHAYYLDYKNDKGSYVNAFMNHLLSWNVAMARMARA 116
                W   P++ LD++EHAYYL Y+N +  YVN   + +++W+ A +R+  A
Sbjct: 186 QKLTAWGIQPVLILDVFEHAYYLKYQNRRNDYVNQLFS-IINWDNAASRLRAA 237