Jatropha Genome Database

JcCB0120561.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0120561.20 + phase: 0 /partial
         (150 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29851.m002458 Protein ariadne-1, putative                             229   3e-61
30170.m013978 Protein ariadne-1, putative                             132   7e-32

>29851.m002458 Protein ariadne-1, putative
          Length = 592

 Score =  229 bits (585), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 107/124 (86%), Positives = 115/124 (92%)

Query: 24  ENEESDFRWAPPKGPSTKIITKASLLAAQREDLRRVMELLSLREHHARTLLIHYRWDVER 83
           ENEESDF WAPPKGP+TKIITK SLLAAQREDLRRVMELLSLREHHARTLLIHYRWDVER
Sbjct: 25  ENEESDFHWAPPKGPTTKIITKESLLAAQREDLRRVMELLSLREHHARTLLIHYRWDVER 84

Query: 84  LLAVFVEKGKSYLFTEAGVTVVEQLDIDSPLTSSSTITCDICIEDISGDKATRMDCGHCY 143
           L AVFVEKGK++LFTEAGVT VEQLD D+PLTSSS I CDICIED+ G++ATRMDC HC+
Sbjct: 85  LFAVFVEKGKTFLFTEAGVTGVEQLDRDAPLTSSSIIMCDICIEDVPGNRATRMDCSHCF 144

Query: 144 CNDC 147
           CNDC
Sbjct: 145 CNDC 148


>30170.m013978 Protein ariadne-1, putative
          Length = 525

 Score =  132 bits (331), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 62/115 (53%), Positives = 84/115 (73%)

Query: 33  APPKGPSTKIITKASLLAAQREDLRRVMELLSLREHHARTLLIHYRWDVERLLAVFVEKG 92
           A    PS+KIIT+ SLLAAQRED+ RVM+LLSL+E+ AR+LLI++RWDV+R+L +F+E G
Sbjct: 35  AVNTSPSSKIITRESLLAAQREDICRVMDLLSLKEYQARSLLIYHRWDVDRVLQLFIENG 94

Query: 93  KSYLFTEAGVTVVEQLDIDSPLTSSSTITCDICIEDISGDKATRMDCGHCYCNDC 147
           K  L+ EAGVT+++  D       SS + C IC +D+S  + T MDCGH +CN C
Sbjct: 95  KDKLYAEAGVTIIDHNDDFFLSQFSSVVECTICFDDVSASEVTAMDCGHFFCNIC 149