Jatropha Genome Database

JcCB0115521.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0115521.20 + phase: 0 /partial/short
         (38 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28200.m000196 trehalose-6-phosphate synthase, putative                 73   2e-14
30147.m014214 trehalose-6-phosphate synthase, putative                 67   2e-12
28206.m000103 trehalose-6-phosphate synthase, putative                 51   9e-08
29908.m006007 trehalose-6-phosphate synthase, putative                 49   5e-07

>28200.m000196 trehalose-6-phosphate synthase, putative
          Length = 395

 Score = 73.2 bits (178), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/38 (89%), Positives = 35/38 (92%)

Query: 1   VLREGNKGYGILVSSTPKETNAFYSLRDPTEVMKFLNS 38
           VLR+GNKGYGILVS  PKETNAFYSLRDPTEVMKFL S
Sbjct: 338 VLRKGNKGYGILVSPVPKETNAFYSLRDPTEVMKFLKS 375


>30147.m014214 trehalose-6-phosphate synthase, putative
          Length = 386

 Score = 67.0 bits (162), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/38 (81%), Positives = 34/38 (89%)

Query: 1   VLREGNKGYGILVSSTPKETNAFYSLRDPTEVMKFLNS 38
           VLRE N GYGILVSS PKE+NAFYSLRDP+EVM+FL S
Sbjct: 339 VLRERNCGYGILVSSVPKESNAFYSLRDPSEVMEFLKS 376


>28206.m000103 trehalose-6-phosphate synthase, putative
          Length = 373

 Score = 51.2 bits (121), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 23/37 (62%), Positives = 30/37 (81%)

Query: 1   VLREGNKGYGILVSSTPKETNAFYSLRDPTEVMKFLN 37
           VLRE  +G+GILVS  PK+T+A YSL++PT+VM FL 
Sbjct: 321 VLRERGQGFGILVSKFPKDTSASYSLQEPTQVMDFLQ 357


>29908.m006007 trehalose-6-phosphate synthase, putative
          Length = 369

 Score = 48.9 bits (115), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/36 (66%), Positives = 26/36 (72%)

Query: 1   VLREGNKGYGILVSSTPKETNAFYSLRDPTEVMKFL 36
           VLR   +G GILVS  PKETNA YSL+DP EV  FL
Sbjct: 317 VLRNRGQGLGILVSKFPKETNASYSLQDPAEVKDFL 352