Jatropha Genome Database

JcCB0115461.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0115461.20 + phase: 0 /partial
         (92 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29647.m001999 conserved hypothetical protein                           78   1e-15
29880.m000366 conserved hypothetical protein                           71   1e-13
29977.m000257 hypothetical protein                                     67   2e-12
29989.m000431 conserved hypothetical protein                           65   5e-12
28153.m000274 conserved hypothetical protein                           62   6e-11
29724.m000845 conserved hypothetical protein                           54   2e-08
29608.m000210 conserved hypothetical protein                           50   2e-07
29593.m000177 conserved hypothetical protein                           46   3e-06

>29647.m001999 conserved hypothetical protein
          Length = 250

 Score = 77.8 bits (190), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 53/79 (67%)

Query: 12  YVFQFFHEVDVHRVLLMCPCTFDNQLLLLERLGSYPTSLDVPLFFVPLWVQVKGLRSGFR 71
           Y+FQFFHEVDV RV    P TF+N  +LL RL       +V L +   W+QV  L  GFR
Sbjct: 84  YLFQFFHEVDVKRVENGGPWTFNNYHILLHRLKEKENPHEVELKWTDFWIQVYRLPIGFR 143

Query: 72  SERVLKDMGDRIGQFMEAD 90
           SE+V+K++G+ +G+++E+D
Sbjct: 144 SEKVVKNIGNYVGEYLESD 162


>29880.m000366 conserved hypothetical protein
          Length = 103

 Score = 70.9 bits (172), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 55/88 (62%)

Query: 1   GMQIREINGGVYVFQFFHEVDVHRVLLMCPCTFDNQLLLLERLGSYPTSLDVPLFFVPLW 60
           GM +REI   +++FQFFH +D+ R++   P TFDN +L+L  L     S ++ LF++ +W
Sbjct: 14  GMCVREIPDQLFLFQFFHPLDLKRIMEGGPWTFDNHMLILHHLQQGEISSNILLFYIAVW 73

Query: 61  VQVKGLRSGFRSERVLKDMGDRIGQFME 88
           VQ+  L  G  S+ V + + + IG FME
Sbjct: 74  VQIHELPIGCMSKAVGRQLSNFIGTFME 101


>29977.m000257 hypothetical protein
          Length = 348

 Score = 67.0 bits (162), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/78 (41%), Positives = 51/78 (65%)

Query: 12  YVFQFFHEVDVHRVLLMCPCTFDNQLLLLERLGSYPTSLDVPLFFVPLWVQVKGLRSGFR 71
           Y+F+FFHEVDV RV    P TF+N  +LL RL  +    DV + +V  W+Q   +  GFR
Sbjct: 37  YLFRFFHEVDVKRVEDGGPWTFNNYHILLHRLVEHEDPQDVDINWVDFWIQAYRVPIGFR 96

Query: 72  SERVLKDMGDRIGQFMEA 89
           SE+V +++G+ I +++++
Sbjct: 97  SEKVARNIGNYIEKYVDS 114


>29989.m000431 conserved hypothetical protein
          Length = 198

 Score = 65.5 bits (158), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 53/90 (58%)

Query: 1   GMQIREINGGVYVFQFFHEVDVHRVLLMCPCTFDNQLLLLERLGSYPTSLDVPLFFVPLW 60
           G+ I+E+   +++FQFFHE+++  ++   P TF+ Q+LL ++L        V LF   +W
Sbjct: 72  GVCIKELEPSLFLFQFFHELEMKHMIEASPWTFEQQVLLFKKLEMNEQPTRVLLFHFSMW 131

Query: 61  VQVKGLRSGFRSERVLKDMGDRIGQFMEAD 90
           +QV  L  GF SERV   +G+ +  F E +
Sbjct: 132 IQVHDLPIGFMSERVAMHIGNYVRTFEEVN 161


>28153.m000274 conserved hypothetical protein
          Length = 403

 Score = 62.0 bits (149), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/79 (40%), Positives = 46/79 (58%)

Query: 12  YVFQFFHEVDVHRVLLMCPCTFDNQLLLLERLGSYPTSLDVPLFFVPLWVQVKGLRSGFR 71
           Y+FQFFH VDV R+    P TF+N  +LL RL        V L +    +QV  L  GF 
Sbjct: 90  YLFQFFHGVDVKRIENGGPWTFNNYHILLHRLKEKENPHKVELKWTNFLIQVYHLPIGFW 149

Query: 72  SERVLKDMGDRIGQFMEAD 90
            E+V K +G+ +G+++E+D
Sbjct: 150 REKVAKSIGNYVGEYLESD 168


>29724.m000845 conserved hypothetical protein
          Length = 167

 Score = 53.5 bits (127), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 50/88 (56%)

Query: 1   GMQIREINGGVYVFQFFHEVDVHRVLLMCPCTFDNQLLLLERLGSYPTSLDVPLFFVPLW 60
           G+ I+EI   +Y+FQFF+ +D  RV+   P +FDN LL+ ++L        + L F+ +W
Sbjct: 62  GICIKEIAVNLYLFQFFYILDSKRVIDGGPWSFDNHLLVYDQLLLGEILAQMKLNFLDMW 121

Query: 61  VQVKGLRSGFRSERVLKDMGDRIGQFME 88
           V V  L  GF S  V K +   + +F++
Sbjct: 122 VHVYELPVGFMSVMVSKQLNKFVEEFLD 149


>29608.m000210 conserved hypothetical protein
          Length = 207

 Score = 50.1 bits (118), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 33/43 (76%)

Query: 1  GMQIREINGGVYVFQFFHEVDVHRVLLMCPCTFDNQLLLLERL 43
          G+ IREI+  +++FQFFHE+D+ RV+   P TF+  LLLL++L
Sbjct: 28 GVCIREISSTLFLFQFFHEIDMKRVINSGPSTFEQHLLLLKQL 70


>29593.m000177 conserved hypothetical protein
          Length = 172

 Score = 46.2 bits (108), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 32/44 (72%)

Query: 1   GMQIREINGGVYVFQFFHEVDVHRVLLMCPCTFDNQLLLLERLG 44
           G+ IRE++  +++FQ F+E+D+ RVL   P  F+N LLL++RL 
Sbjct: 82  GVYIRELSPNLFLFQLFYEMDIRRVLEGSPWLFNNHLLLIKRLA 125