Jatropha Genome Database

JcCB0115461.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0115461.10 - phase: 0 /partial
         (340 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29724.m000833 fumarylacetoacetate hydrolase, putative                 642   0.0  

>29724.m000833 fumarylacetoacetate hydrolase, putative
          Length = 421

 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/340 (89%), Positives = 324/340 (95%)

Query: 1   MALKSFIDVHPDSHFPIQNLPYGVFKPQPSSPPRPAVAIGDYVLDLSEIALAGLFDGPIL 60
           MALKSFI+VHPDSHFPIQNLPYGVFKP+P+S PRPAVAIGDY+LDLSEI LAGLFDGP L
Sbjct: 1   MALKSFIEVHPDSHFPIQNLPYGVFKPEPTSTPRPAVAIGDYILDLSEITLAGLFDGPTL 60

Query: 61  KGSDCFLQLNLNKFVAMGRPAWKEARATLQKLLSSTEPTLRDNASLRQKSLVLMSKVELL 120
           K SDCFLQ NLNKF+A+GRPAWKEAR+TLQKLLSSTEP LRD+ +LRQKSL+ +SKVE++
Sbjct: 61  KNSDCFLQPNLNKFIALGRPAWKEARSTLQKLLSSTEPALRDDRNLRQKSLLPLSKVEMV 120

Query: 121 VPIAIGDYTDFFSSMHHAKNCGTIFRGPQNPIPANWFHLPIAYHGRASSIVISGTDIVRP 180
           +PIAIGDYTDFFSSMHHAKNCGTIFRGPQNPIPANWFHLPIAYHGRASS+V+SGT IVRP
Sbjct: 121 LPIAIGDYTDFFSSMHHAKNCGTIFRGPQNPIPANWFHLPIAYHGRASSVVVSGTGIVRP 180

Query: 181 RGQGHPTGNSPPYFGPSMKLDFELEMAAVVGPGNELGKPVDVNEAGDHIFGLVLMNDWSA 240
           RGQGHP GNSP YFGPS KLDFELEMAAVVGPGNELGKPVDVNEAGDH+FGLVLMNDWSA
Sbjct: 181 RGQGHPAGNSPLYFGPSQKLDFELEMAAVVGPGNELGKPVDVNEAGDHLFGLVLMNDWSA 240

Query: 241 RDIQAWEYVPLGPFLGKSFGTTISPWIVTLDALEPFACDAPKQDPQPLPYLAEKISKNYD 300
           RDIQAWEYVPLGPFLGKSFGTTISPWIVTLDALEPFACDAPKQDP PLPYLAEKISKNYD
Sbjct: 241 RDIQAWEYVPLGPFLGKSFGTTISPWIVTLDALEPFACDAPKQDPHPLPYLAEKISKNYD 300

Query: 301 ISLEVQIKPTGQEDSTVVTRSNFKHLYWTLTQQLAHHTIN 340
           ISLEVQIK  G+ED+ VVTRSNFKHLYWTLTQQLAHHTIN
Sbjct: 301 ISLEVQIKAAGKEDACVVTRSNFKHLYWTLTQQLAHHTIN 340