Jatropha Genome Database

JcCB0114361.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0114361.10 - phase: 0 /pseudo
         (345 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29726.m004021 Cullin-1, putative                                      143   1e-34
30190.m011032 conserved hypothetical protein                          122   2e-28
29726.m004022 conserved hypothetical protein                          120   9e-28
30128.m008798 hypothetical protein                                    110   1e-24

>29726.m004021 Cullin-1, putative
          Length = 744

 Score =  143 bits (361), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 147/285 (51%), Gaps = 16/285 (5%)

Query: 19  EEGLKKIDDAMLRKKMIAEGRSVLPFTTAQNMEIYEYPSHIMPSISCCVYNLCTQKS-KN 77
           E+G + +   + + K I EG     F++   M +Y             +YN+CTQK   +
Sbjct: 12  EQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLY-----------TTIYNMCTQKPPHD 60

Query: 78  YSEEIYEKYLNYLEEWIMDKVIPRLLGKHGAALLTEVTESWSEFKAFADSSYKFVEFLDR 137
           YS+++Y+KY    EE+I   V+P L  KH   +L E+ + W+  K       +F  +LDR
Sbjct: 61  YSQQLYDKYRESFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDR 120

Query: 138 WYVPRREYTSLVDAPRRYFCILVCDRLYGQIQEAIMSLIIQERKGKDIDRNLLKTVFGFM 197
           +++ RR    L +     F  LV   L  ++++A++SLI QER+G+ IDR LLK V    
Sbjct: 121 YFIARRSLPPLNEVGLTCFRDLVYQELNAKVRDAVISLIDQEREGEQIDRALLKNVLDIF 180

Query: 198 GPEGKGATNYYEK-FEQIMLAEAAAYYSELSMEWWFWRDSFTNYLQKVDWCLIQEGARAE 256
              G G  +YYE  FE  ML +  +YYS  +   W   DS  +Y+ K + CL +E  R  
Sbjct: 181 VEIGMGQMDYYENDFEVAMLKDTGSYYSRKASN-WILEDSCPDYMLKAEECLKREKDRVS 239

Query: 257 VYPYKTTKEKLLNVIKYILLERNANRWAQNQKA--QGVTADDKVD 299
            Y + +++ KLL  ++Y LL   AN+  + + +    +  DDKV+
Sbjct: 240 HYLHSSSEPKLLEKVQYELLSVFANQLLEKEHSGCHALLRDDKVE 284


>30190.m011032 conserved hypothetical protein
          Length = 366

 Score =  122 bits (307), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 127/237 (53%), Gaps = 5/237 (2%)

Query: 67  VYNLCTQKS-KNYSEEIYEKYLNYLEEWIMDKVIPRLLGKHGAALLTEVTESWSEFKAFA 125
           +YN+CTQK   +YS+++YEKY    EE+I   V+P +  KH   +L E+ + WS  K   
Sbjct: 45  IYNMCTQKPPHDYSQQLYEKYREAFEEYINSIVLPSIREKHDEFMLRELVKRWSNHKIMV 104

Query: 126 DSSYKFVEFLDRWYVPRREYTSLVDAPRRYFCILVCDRLYGQIQEAIMSLIIQERKGKDI 185
               +F  +LDR+++ RR    L +     F  LV   +  + ++A++ LI +ER+G+ I
Sbjct: 105 RWLSRFFHYLDRYFIARRSLPPLNEVGLACFRDLVYQEVCVKARDAVVVLIDKEREGEQI 164

Query: 186 DRNLLKTVFGFMGPEGKGATNYYEK-FEQIMLAEAAAYYSELSMEWWFWRDSFTNYLQKV 244
           DR LLK V       G GA   YE+ FE  ML +  +YY   +   W   DS  +Y+ K 
Sbjct: 165 DRALLKNVLDIFVEIGMGAMERYEEDFEANMLHDTGSYYFRKASN-WILEDSCPDYMLKA 223

Query: 245 DWCLIQEGARAEVYPYKTTKEKLLNVIKYILLERNANRWAQNQKA--QGVTADDKVD 299
           + CL +E  R   Y +  ++ KL+  +++ LL   AN+  + + +  + +  DDKV+
Sbjct: 224 EECLKKERDRVSHYLHSNSEPKLVEKVQHELLVTVANQLLEKEHSGCRALLRDDKVE 280


>29726.m004022 conserved hypothetical protein
          Length = 287

 Score =  120 bits (301), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 139/278 (50%), Gaps = 10/278 (3%)

Query: 19  EEGLKKIDDAMLRKKMIAEGRSVLPFTTAQNMEIYEYPSHIMPSISCCVYNLCTQKS-KN 77
           E GLK I DA+ +   I EG      ++  + E Y     +       +YNL       +
Sbjct: 15  EAGLKVIQDAVDKVNSIVEGTCTPSCSSCLSSEDYMLYYTV-------IYNLSVANPLGD 67

Query: 78  YSEEIYEKYLNYLEEWIMDKVIPRLLGKHGAALLTEVTESWSEFKAFADSSYKFVEFLDR 137
           YS+E+Y KY    E+ I  KV+P L  K    LL E+   W+++K       +F  FLDR
Sbjct: 68  YSKELYYKYKEIFEDHITSKVLPSLREKRDQDLLQELVNRWADYKIMTRWLSRFFHFLDR 127

Query: 138 WYVPRREYTSLVDAPRRYFCILVCDRLYGQIQEAIMSLIIQERKGKDIDRNLLKTVFGFM 197
           +++P ++  SL +     F   V   +  QI++A++S+I  ER+G+++D  L+  +    
Sbjct: 128 YFIPTKKLPSLQETSFTAFHNSVYGEMNSQIRDAVISMINGEREGEEVDHALVNNIVSIY 187

Query: 198 GPEGKGATNYYEK-FEQIMLAEAAAYYSELSMEWWFWRDSFTNYLQKVDWCLIQEGARAE 256
              G  +  YY++ FE  +L + A +YSE +  W  ++ S+ +YL   + CL  E  +  
Sbjct: 188 VEMGIDSNKYYDQDFEAALLQDTATFYSEKASNWIQFK-SYNDYLLMAEQCLKHEKEKVS 246

Query: 257 VYPYKTTKEKLLNVIKYILLERNANRWAQNQKAQGVTA 294
            Y   TT++KLL V+++ LL  +A+   + ++   V  
Sbjct: 247 FYLQATTQKKLLQVVEHELLNVHASELEEMKQLDHVVV 284


>30128.m008798 hypothetical protein
          Length = 319

 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 107/215 (49%), Gaps = 4/215 (1%)

Query: 67  VYNLCTQKSKNYSEEIYEKYLNYLEEWIMDKVIPRLLGKHGAALLTEVTESWSEFKAFAD 126
            Y L +  S + S  +YE++   +E+ ++  V+P L+ K  A LL + T   S ++  A 
Sbjct: 38  AYELVSAGSYDNSIWLYERFKETMEQTVISIVLPSLINKCNAPLLRDFTLMLSNYRLMAT 97

Query: 127 SSYKFVEFLDRWYVPRRE-YTSLVDAPRRYFCILVCDRLYGQIQEAIMSLIIQERKGKDI 185
              +F E+L R ++   +    L +     F  +V   LY + Q A +SLI QER G  I
Sbjct: 98  WLCRFFEYLGRNFICHYDPMLPLNEISHNCFQDMVIRELYSEFQAAAISLINQERMGLHI 157

Query: 186 DRNLLK-TVFGFMGPEGKGATNYYEKFEQIMLAEAAAYYSELSMEWWFWRDSFTNYLQKV 244
           D +LLK  V  FM        +YYE FE  ML E A YYS+L+ +W    DS   Y+QKV
Sbjct: 158 DHDLLKKVVLSFMEFHKDEGVSYYEDFEMAMLEETATYYSQLTRQWLLC-DSSEEYIQKV 216

Query: 245 DWCLIQEGARAEVY-PYKTTKEKLLNVIKYILLER 278
            WCL QE  RA  Y P        ++ I    +ER
Sbjct: 217 SWCLDQEKGRASCYWPLAQKCHNGIDSINAAFMER 251