Jatropha Genome Database

JcCB0113601.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0113601.10 + phase: 0 
         (269 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29932.m000590 ribose-5-phosphate isomerase, putative                  424   e-119
30128.m008607 ribose-5-phosphate isomerase, putative                  298   2e-81
29776.m000478 ribose-5-phosphate isomerase, putative                   96   2e-20

>29932.m000590 ribose-5-phosphate isomerase, putative
          Length = 264

 Score =  424 bits (1089), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/271 (81%), Positives = 235/271 (86%), Gaps = 11/271 (4%)

Query: 1   MAIPCQPLIGSEKLSMEAGPLSPMAPISQPPVILTQDELKKIAAYKAVDFVQSGMVLGLG 60
           MAIPC P I SEKL+        M      P +L+QDELKKIAAYKAV+FVQSGMVLGLG
Sbjct: 1   MAIPCPPFIASEKLA-------SMESSPLSPPLLSQDELKKIAAYKAVEFVQSGMVLGLG 53

Query: 61  TGSTAKHAVDRIADLLHQGKLKNIIGIPTSKKTHQQALSLGIPLSDLDSHPNVDLAIDGA 120
           TGSTAKHAVDRIADLLHQGKL NI+GIPTSKKT +QALSLGIPLSDLDSHP VDLAIDGA
Sbjct: 54  TGSTAKHAVDRIADLLHQGKLTNIVGIPTSKKTQKQALSLGIPLSDLDSHPVVDLAIDGA 113

Query: 121 DEVDSDLNLVKGRGGSLLREKMIESACKKFVVIVDESKLVPHIGAN-GAMPVEVVPFCWK 179
           DEVDS LNLVKGRGGSLLREKMIESACKKF+VIVDE+KLVPHIGAN GAMPVEVVPFCWK
Sbjct: 114 DEVDSHLNLVKGRGGSLLREKMIESACKKFIVIVDETKLVPHIGANGGAMPVEVVPFCWK 173

Query: 180 FTQERLQEMFGYADCLAKLRR-NGDSESGEPFVTDNGNYIVDLFFKKDIGDLKAASDAIL 238
           FTQE+LQ +F YA C+AKLR  NG  E  EPFVTDNGNYIVDLFFKK+IGDL+ ASD IL
Sbjct: 174 FTQEKLQSLFDYAGCVAKLRTDNGGKE--EPFVTDNGNYIVDLFFKKEIGDLEVASDKIL 231

Query: 239 RLAGVVEHGMFLGMATTVIVAGEFGVTMKNK 269
           RLAGVVEHGMFL MATTVIVAGE G+T+KNK
Sbjct: 232 RLAGVVEHGMFLDMATTVIVAGELGITIKNK 262


>30128.m008607 ribose-5-phosphate isomerase, putative
          Length = 284

 Score =  298 bits (762), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 155/251 (61%), Positives = 189/251 (75%), Gaps = 4/251 (1%)

Query: 20  PLSPMAPISQPPVILTQDELKKIAAYKAVDFVQSGMVLGLGTGSTAKHAVDRIADLLHQG 79
           P    +  +Q   +LTQD+LKK+AA KAVD+V+SGM+LGLGTGSTA   V +I +LL  G
Sbjct: 37  PTKTFSIKAQSAPVLTQDDLKKLAADKAVDYVKSGMILGLGTGSTAAFVVAKIGELLKSG 96

Query: 80  KLKNIIGIPTSKKTHQQALSLGIPLSDLDSHPNVDLAIDGADEVDSDLNLVKGRGGSLLR 139
           +LK+IIGIPTSK+T +QALSLGIPLS LD HP +DLAIDGADEVD DLNLVKGRGG+LLR
Sbjct: 97  ELKDIIGIPTSKRTEEQALSLGIPLSVLDEHPKLDLAIDGADEVDPDLNLVKGRGGALLR 156

Query: 140 EKMIESACKKFVVIVDESKLVPHIGANG-AMPVEVVPFCWKFTQERLQEMFGYADCLAKL 198
           EKM+E+A  KFVV+ DE+KLV  +G +  AMPVEVV FCWK+   RL+E+F      AKL
Sbjct: 157 EKMVEAASDKFVVVADETKLVDGLGGSKLAMPVEVVQFCWKYNLIRLKELFKDEGVDAKL 216

Query: 199 RRNGDSESGEPFVTDNGNYIVDLFFKKDIGDLKAASDAILRLAGVVEHGMFLGMATTVIV 258
           R N   E G+P+VTDN NYIVDL+F+  I D  AA   I  L GVVEHG+FL MAT VI+
Sbjct: 217 RLN---EDGKPYVTDNSNYIVDLYFENPIKDGYAAGKEISSLEGVVEHGLFLDMATAVII 273

Query: 259 AGEFGVTMKNK 269
           AG+ G+ +K K
Sbjct: 274 AGKTGIDVKTK 284


>29776.m000478 ribose-5-phosphate isomerase, putative
          Length = 262

 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 115/227 (50%), Gaps = 17/227 (7%)

Query: 55  MVLGLGTGSTAKHAVDRIADLLHQGKLKNIIGIPTSKKTHQQALSLGIPLSDLDSHPNVD 114
           MV+GLG+G  +  A+  +   L  G LK+I+GIP S  +  +A   GI L        +D
Sbjct: 1   MVIGLGSGHASGMAIQYLGRQLRIGVLKDIVGIPMSIASASEAAKAGIRLDRYQDGSQID 60

Query: 115 LAIDGADEVDSD-LNLVKGRGG-----SLLREKMIESACKKFVVIVDESKLVPHIGANGA 168
            A D AD ++ D L  V GR       S ++EK I +A  + V ++ E +    +  +G+
Sbjct: 61  FAFDDADVLEEDTLIAVVGRQKMQGEESFIQEKSILNAASRHVFMISEKQYKSRL--DGS 118

Query: 169 MPVEVVPFCWKFTQERLQEMF-GYADCLAKLRRNGDSESGE-----PFVTDNGNYIVDLF 222
           +PV + P  W  T E++ ++F G A+     RR    ++G      P VT  G+ ++D+ 
Sbjct: 119 IPVLIQPLSWMETAEQIDDLFLGDAEI---WRRPSIGQAGPLGGDFPLVTREGHNVLDVI 175

Query: 223 FKKDIGDLKAASDAILRLAGVVEHGMFLGMATTVIVAGEFGVTMKNK 269
           F   I  L   ++++ ++ GVV+HG+      T ++A + G+ + N 
Sbjct: 176 FTSPIQSLAEVAESLDKVDGVVDHGIISKFPCTAVIASDSGLYIVNN 222