Jatropha Genome Database

JcCB0112461.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0112461.10 - phase: 0 /partial
         (201 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29851.m002457 S-adenosylmethionine-dependent methyltransferase, ...   374   e-104
29889.m003374 S-adenosylmethionine-dependent methyltransferase, ...    98   3e-21
29904.m002901 S-adenosylmethionine-dependent methyltransferase, ...    88   2e-18
29990.m000520 S-adenosylmethionine-dependent methyltransferase, ...    80   4e-16
29586.m000596 conserved hypothetical protein                           54   6e-08

>29851.m002457 S-adenosylmethionine-dependent methyltransferase,
           putative
          Length = 250

 Score =  374 bits (959), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 174/199 (87%), Positives = 186/199 (93%), Gaps = 2/199 (1%)

Query: 3   SDKHNVTPSTALAYLDPNYWNDRFSKEEHFEWFKDYSHFRHLIQAHITTNASMKVLELGC 62
           ++K  V PST LAYLDPNYWN+RFSKEEH+EWFKDYSHF+HLIQAHIT N+S  VLELGC
Sbjct: 8   TEKEEVAPSTVLAYLDPNYWNERFSKEEHYEWFKDYSHFQHLIQAHITPNSS--VLELGC 65

Query: 63  GNSQLCEEIYKDGITDITCIDLSAVAVEKMRQRLSVKGYKEIKVLEADMLDLPFSDKCFD 122
           GNSQLCEE+YKDGITDITCIDLSAVAVEKM+QRLS KGY EIKVLEADMLDLPFSDKCFD
Sbjct: 66  GNSQLCEEMYKDGITDITCIDLSAVAVEKMQQRLSAKGYNEIKVLEADMLDLPFSDKCFD 125

Query: 123 VVIEKGTMDVLFVNSGDPWNPRPTTVAQVKAMLDGVHRVLKPDGIFISISFGQPHFRRPL 182
           VVIEKGTMDVLFVNSGDPWNPRP TV QVKAMLD VHRVLKPDGIFISISFGQPHFRRP+
Sbjct: 126 VVIEKGTMDVLFVNSGDPWNPRPATVKQVKAMLDSVHRVLKPDGIFISISFGQPHFRRPI 185

Query: 183 FNAPEFTWSVEWNTFGDGF 201
           F+APE+TWS+EW TFGDGF
Sbjct: 186 FDAPEYTWSLEWKTFGDGF 204


>29889.m003374 S-adenosylmethionine-dependent methyltransferase,
           putative
          Length = 243

 Score = 97.8 bits (242), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 95/175 (54%), Gaps = 12/175 (6%)

Query: 11  STALAYLDPNYWNDRFSKEEH-FEWFKDYSHFRHLIQAHITTNASMKVLELGCGNSQLCE 69
           ++  AY +  YW++R++ E   F+W++ YS    LI  +I  +   ++L +GCGNS   +
Sbjct: 5   TSTQAYGESWYWDNRYANESGPFDWYQKYSSLAPLINLYIPRHHHPRILVVGCGNSAFSD 64

Query: 70  EIYKDGITDITCIDLSAVAVEKMRQRLSVKGYKEIKVLEADMLDL-PFSDKCFDVVIEKG 128
            +  DG  D+  ID+S+V +E M  + S +   ++K ++ D+ ++  F    FD VI+KG
Sbjct: 65  GMVDDGYDDVVNIDISSVVIEAMNNKYSNR--PQLKYIQMDVREMSAFQTGSFDAVIDKG 122

Query: 129 TMDVLFVNSGDPWNPRPTTVAQVKAMLDGVHRVLKPDGIFISISFGQPHFRRPLF 183
           T+D +   +    N           ML+ V RVLK  G++I +++G P +R  L 
Sbjct: 123 TLDSILCGNNSRQN--------ATLMLEDVWRVLKDKGVYILVTYGAPVYRLCLL 169


>29904.m002901 S-adenosylmethionine-dependent methyltransferase,
           putative
          Length = 761

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 26/208 (12%)

Query: 4   DKHNVTPS------TALAYLDPNYWNDRFS---KEEHFEWFKDYSHFRH-LIQAHITTNA 53
           DK    PS      T   +     W+  F+    ++ FEW+ ++   R  L+      ++
Sbjct: 5   DKQQSQPSSNDLLETLGDFTSKENWDKFFTIRGADDSFEWYAEWPQLRQPLLSLFANDDS 64

Query: 54  SMKVLELGCGNSQLCEEIYKDGITDITCIDLSAVAVEKMRQRLSVKGYKEIKVLEADMLD 113
            +++L  GCGNS+L E +Y  G  DIT ID S V +  M +R +V+    ++    DM D
Sbjct: 65  PVQILMPGCGNSRLSENLYDLGFKDITNIDFSKVVISDMLRR-NVRDRPGMRWRVMDMTD 123

Query: 114 LPFSDKCFDVVIEKGTMDVLFVNSGDP-WNPRPTTVAQVKAMLDGVHRVLKPDGIFISIS 172
           + F+D+ FDVV++KG +D L     +P   P+  T       L  V RVLK  G FI ++
Sbjct: 124 MQFADETFDVVLDKGGLDALM----EPELGPKLGT-----KYLSEVQRVLKFGGKFICLT 174

Query: 173 FGQPHFRRPLFNAPEFTW-----SVEWN 195
             + H    LF+   F W     ++ WN
Sbjct: 175 LAESHVLGLLFSKFRFGWKLNIHAIPWN 202


>29990.m000520 S-adenosylmethionine-dependent methyltransferase,
           putative
          Length = 194

 Score = 80.5 bits (197), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 77/125 (61%), Gaps = 6/125 (4%)

Query: 6   HNVTPSTALAYLDPNYWNDRFSKEE-HFEWFKDYSHFRHLIQAHITTNASMKVLELGCGN 64
            +V+      Y D  YW+ R+ +E   F+W++ YS  R  ++ +I  ++  +VL +GCGN
Sbjct: 3   RDVSSCNTYNYGDALYWDARYVQEGGSFDWYQRYSSLRPFVRRYIPLSS--RVLMVGCGN 60

Query: 65  SQLCEEIYKDGITDITCIDLSAVAVEKMRQRLSVKGYKEIKVLEADMLDLP-FSDKCFDV 123
           + + E++ KDG  DI  ID+S+VA++ MR++     + ++K ++ D+ D+  F D+ F+ 
Sbjct: 61  ALMSEDMVKDGYEDIMNIDISSVAIDMMRKKYEY--FPQLKYMQLDVRDMSFFPDESFNG 118

Query: 124 VIEKG 128
           VI+KG
Sbjct: 119 VIDKG 123


>29586.m000596 conserved hypothetical protein
          Length = 336

 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 13/118 (11%)

Query: 57  VLELGCGNSQLCEEIYKDGITDITCIDLSAVAVEKMRQRLSVKGYKEIKVLEADMLDLPF 116
           VL+LG GN  L +E+ K G +D+T  D S  A++  R+     G+  I  L  D+L+   
Sbjct: 161 VLDLGTGNGLLLQELAKQGFSDLTGADYSEGAIDLARKLADRDGFSNINFLVDDILETKL 220

Query: 117 SDKCFDVVIEKGTMDVLFVNSGDPWNPRPTTVAQVKAML--DGVHRVLKPDGIFISIS 172
            ++ F +V++KGT+D + ++   P          +K ++  D V +++   GI +  S
Sbjct: 221 -ERQFKLVMDKGTLDAIGLHPDGP----------IKRIMYWDSVSKLVASGGILVITS 267