Jatropha Genome Database
- JcCB0109541.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0109541.10 + phase: 1 /partial
(146 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29830.m001424 Adipocyte plasma membrane-associated protein, puta... 164 2e-41
29830.m001423 Adipocyte plasma membrane-associated protein, puta... 79 6e-16
29739.m003743 Adipocyte plasma membrane-associated protein, puta... 67 3e-12
28094.m000178 strictosidine synthase, putative 59 8e-10
29577.m000452 strictosidine synthase, putative 55 1e-08
30221.m002257 strictosidine synthase, putative 52 7e-08
28094.m000175 strictosidine synthase, putative 49 9e-07
>29830.m001424 Adipocyte plasma membrane-associated protein,
putative
Length = 380
Score = 164 bits (414), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 94/126 (74%), Gaps = 1/126 (0%)
Query: 11 RRCRKYYIKGNKKGSLEKFTDLPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVRK 70
RRCRKYYI+GNKKG +E F LPG PDNIH DGHGHFWIAL + F V++YPF+RK
Sbjct: 252 RRCRKYYIQGNKKGQIENFISLPGAPDNIHSDGHGHFWIALSSGNSAFVDLVYRYPFIRK 311
Query: 71 LAGIVLKHKGNIGDTGKNGGVFVVDLEGKLISHYYDPELKLISSSVKIGNHLYCGSITYP 130
I ++ KG + +G N G++VVDLEG I+HYYD L++ SS V+IG+H+YCGSI P
Sbjct: 312 FMAISIRFKGPVY-SGNNAGLYVVDLEGNPIAHYYDHNLRMTSSGVRIGDHIYCGSIEAP 370
Query: 131 YIIRLN 136
YI+RLN
Sbjct: 371 YILRLN 376
>29830.m001423 Adipocyte plasma membrane-associated protein,
putative
Length = 312
Score = 79.3 bits (194), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 40/54 (74%)
Query: 12 RCRKYYIKGNKKGSLEKFTDLPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKY 65
RC+KYYI GNKKG +EKF DLPG+ DNIHYDGHGHFWIA I F ++ Y
Sbjct: 248 RCKKYYIHGNKKGRIEKFIDLPGLLDNIHYDGHGHFWIASATVIIIFVSIMYIY 301
>29739.m003743 Adipocyte plasma membrane-associated protein,
putative
Length = 356
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 9 YRRRCRKYYIKGNKKGSLEKFTD-LPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYPF 67
++ RC+K+++KG KG E D LPG PDNI+ G FWI L + V
Sbjct: 221 WKFRCQKHWLKGEDKGKTETLIDNLPGAPDNINLAPDGSFWICLLQVAADGLEFVHTSKA 280
Query: 68 VRKLAGIVLKHKGNIGDTGKNGGVFVVDLEGKLISHYYDPELKLIS---SSVKIGNHLYC 124
+ L K + KN V V +GK+ + DP+ K++S S+V+ HLY
Sbjct: 281 SKHLVASFPKLIELVNGVEKNAMVVNVAADGKITRKFDDPDGKVVSFVTSAVEFDGHLYL 340
Query: 125 GSITYPYIIRLNL 137
GS+ ++ +L L
Sbjct: 341 GSLKNNFVGKLPL 353
>28094.m000178 strictosidine synthase, putative
Length = 375
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Query: 4 FGLVHYRRRCR--KYYIKGNKKGSLEKFTDLPGMPDNIHYDGHGHFWIALPMEITTFWKA 61
F L+ CR KY+IK +K G LE F +PG PDNI G +W+A+ F +
Sbjct: 234 FILIAETTTCRVLKYWIKTSKAGILEVFAQVPGFPDNIKRSPRGGYWVAINSRRDKFLEW 293
Query: 62 VFKYPFVR----KLAGIVLKHKGNIGDTGKNGGVFVVDLEGKLISHYYD-PELKLISSSV 116
V +P++ KL ++K +G G +D G ++ + D K +S +
Sbjct: 294 VLSHPWIGNSLIKLPFDLMKIYSILGKYRGTGMAVRLDENGDILEVFEDRNRFKTLSEVM 353
Query: 117 KIGNHLYCGSITYPYIIR 134
+ L+ GSI P++ R
Sbjct: 354 EKDGKLWIGSINLPFVGR 371
>29577.m000452 strictosidine synthase, putative
Length = 372
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 6/130 (4%)
Query: 12 RCRKYYIKGNKKGSLEKFTDLPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVRKL 71
R KY+I+G K G++E +LPG PDNI + GH+W+A+ T + + P++R +
Sbjct: 240 RIMKYWIEGPKTGNVELVANLPGFPDNIRVNDKGHYWVAIDCCRTRAQEILTHNPWIRSV 299
Query: 72 ---AGIVLKHKGNIGDTGKNGGVFVVDLEGKLISHYYDPE---LKLISSSVKIGNHLYCG 125
I + + V + + G+++ DP+ +KL+S ++ L+ G
Sbjct: 300 YFRLPIRMSILARLMGMKMYTVVSLFNENGEILEVLEDPKGVVMKLVSEVREVQGKLWIG 359
Query: 126 SITYPYIIRL 135
++ + +I L
Sbjct: 360 TVAHNHIATL 369
>30221.m002257 strictosidine synthase, putative
Length = 391
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Query: 12 RCRKYYIKGNKKGSLEKFTDLPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVRK- 70
R KY++KG K G+ E LPG PDN+ + G+FW+A+ T + YP +R
Sbjct: 258 RLSKYWLKGEKAGTTEVLAILPGFPDNVRTNEEGNFWVAVHCRRTYYSYICALYPKLRTF 317
Query: 71 LAGIVLKHK----GNIGDTGKNGGVFV-VDLEGKLISHYYDPE---LKLISSSVKIGNHL 122
L + + K +IG G+ V V EGKL+ D + +K IS + L
Sbjct: 318 LLKLPISAKIHYLFHIG--GRLHAVAVKYSPEGKLLQILEDSQGKVVKAISEVEERDGKL 375
Query: 123 YCGSITYPYIIRLNLA 138
+ GS+ P++ NLA
Sbjct: 376 WMGSVLMPFVGVYNLA 391
>28094.m000175 strictosidine synthase, putative
Length = 372
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 23/150 (15%)
Query: 4 FGLVHYRRRCR--KYYIKGNKKGSLEKFTDLPGMPDNIHYDGHGHFWIAL--------PM 53
F LV C+ ++++ G G ++ F LPG PDNI + G FW+AL +
Sbjct: 230 FVLVAETSTCQISRFWLHGPNAGKVDVFAKLPGFPDNIRRNSKGEFWVALHAKEGFLAKL 289
Query: 54 EITTFW--KAVFKYPF-VRKLAGIVLKHKGNIGDTGKNGGVFVVDLEGKLISHYYDPE-- 108
++ W K + K+P ++L +++ K + +G +GK++ D +
Sbjct: 290 ALSNSWIGKTLLKFPLSFKQLHSLLVGGKPHATAIKLSG-------DGKIVQVLEDCDGK 342
Query: 109 -LKLISSSVKIGNHLYCGSITYPYIIRLNL 137
L+ IS + L+ GS+ P++ NL
Sbjct: 343 RLRFISEVEEKDGKLWIGSVLMPFLGIYNL 372