Jatropha Genome Database

JcCB0108291.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0108291.30 + phase: 0 
         (93 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29092.m000450 C-14 sterol reductase, putative                         112   4e-26

>29092.m000450 C-14 sterol reductase, putative
          Length = 282

 Score =  112 bits (280), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 54/80 (67%), Positives = 61/80 (76%)

Query: 1  MDMGFLLHALIPSWNSVVVLAXXXXYLAIAGSILPGKVVPGVTLQDGSRLYYRCNGXXXX 60
          MD+GF+LH+LIPSWNSV+VL     YLAI GSILPGK+VPGV LQDGSRLYYRCNG    
Sbjct: 1  MDLGFVLHSLIPSWNSVIVLVIFFVYLAIFGSILPGKLVPGVILQDGSRLYYRCNGLLSL 60

Query: 61 XXXXXXXGIGAKMDLVSPTV 80
                 GIG K+DL+SPTV
Sbjct: 61 LLLVALLGIGTKLDLISPTV 80