Jatropha Genome Database

JcCB0107551.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0107551.10 - phase: 0 /partial
         (165 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29942.m000731 aspartate kinase, putative                              296   2e-81

>29942.m000731 aspartate kinase, putative
          Length = 376

 Score =  296 bits (759), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 146/165 (88%), Positives = 154/165 (93%)

Query: 1   MKSIPLILMGCGGVGRQLIQHIVSCRSLHAKQGVHLRVVGVCDSKSLVAASDVFTRELND 60
           MKSIPL+LMGCGGVGRQL+QHI+SCRSLHA QGVHLRVVGVCDSKSLV ASDV TRELND
Sbjct: 1   MKSIPLLLMGCGGVGRQLLQHILSCRSLHASQGVHLRVVGVCDSKSLVVASDVLTRELND 60

Query: 61  AFLSEVCRVKLNGSSLSTLADFDECLVYSNSESKRKVIDIAALLGKSTGLAFVDCSASSE 120
            FLSEVCR+KLNGS LSTL + DECLVYSN ESKRK IDIAALLGKSTGLAFVDCSAS +
Sbjct: 61  QFLSEVCRLKLNGSPLSTLGNCDECLVYSNLESKRKAIDIAALLGKSTGLAFVDCSASID 120

Query: 121 TIGVLNQVVDLRCCIVLANKKPLTSTLEDYDKLVSYPRRIRHEST 165
           TIGVLN+VVDL CCIVLANKKPLTSTLEDYDKLVS+PRRIRHEST
Sbjct: 121 TIGVLNRVVDLGCCIVLANKKPLTSTLEDYDKLVSFPRRIRHEST 165