Jatropha Genome Database

JcCB0106871.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0106871.20 - phase: 0 /partial
         (89 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29675.m000398 alpha-1,3-mannosyl-glycoprotein beta-1, 2-n-acetyl...   132   4e-32

>29675.m000398 alpha-1,3-mannosyl-glycoprotein beta-1,
           2-n-acetylglucosaminyltransferase, putative
          Length = 389

 Score =  132 bits (331), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 61/69 (88%), Positives = 67/69 (97%)

Query: 1   HLDSQLVYPERPGELIAYYKIARHYKWALDQLFYKHNFSRVIILEDDMEIAPDFFNYFEA 60
           H+DS+ V+P+RPGELIAYYKIARHYKWALDQLFYKHNFSRVIILEDDMEIAPDFF+YFEA
Sbjct: 163 HIDSEPVHPDRPGELIAYYKIARHYKWALDQLFYKHNFSRVIILEDDMEIAPDFFDYFEA 222

Query: 61  AADLLDKDK 69
           AA +LDKDK
Sbjct: 223 AAAVLDKDK 231