Jatropha Genome Database
- JcCB0104911.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0104911.10 + phase: 0 /pseudo/partial
(421 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30169.m006413 ubiquitin-protein ligase, putative 152 3e-37
30147.m013905 ubiquitin-protein ligase, putative 107 1e-23
30147.m014083 conserved hypothetical protein 72 5e-13
30170.m013981 ubiquitin-protein ligase, putative 70 2e-12
27533.m000078 conserved hypothetical protein 65 7e-11
44032.m000018 conserved hypothetical protein 59 3e-09
30004.m000437 conserved hypothetical protein 58 8e-09
30138.m003851 ubiquitin-protein ligase, putative 50 3e-06
30099.m001660 hypothetical protein 49 6e-06
>30169.m006413 ubiquitin-protein ligase, putative
Length = 464
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 208/433 (48%), Gaps = 53/433 (12%)
Query: 4 ISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCK------SAG 57
ISQLP+++L ++LS LT+K+A +T +LS +WRHL+ Y ++FD G
Sbjct: 35 ISQLPEDVLLNILSRLTMKEAARTSILSTRWRHLWTYYTGI----MDFDASLTMWYLQLG 90
Query: 58 LDYTKSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLG 117
L +KS ++++ FV WVN+ L ++GP + R+ F L F Y+ID WIT A++
Sbjct: 91 LG-SKSLDMERHS--FVSWVNQVLRSHEGPTMEGLRICFDLDSDFMYEIDSWITIAMQKR 147
Query: 118 VEQLKIICSCYGISYRKQHELYAFSFQHLSDA--SELKHLELNSCILKQDFNGQLHSLKF 175
V++L+I + S + YAF L+D+ S LK L+LN
Sbjct: 148 VKRLEIDLTNIEPSIKTTGS-YAFPSGLLNDSSFSSLKTLQLN----------------M 190
Query: 176 IDLIFTPLDQSILLFILSMCCNLERLRLAWCLCPAVLSFCGPFLQLKMLTVSFCKGLEEI 235
+D+ L +LS C LE L + L G L+LK L + C L+ +
Sbjct: 191 VDVTGEALQH----LLLSWCPLLEVLSIVNSTSLVSLKVSGSSLKLKYLEMVCCNNLKYL 246
Query: 236 ELSATNLTTLEVFGDRTNFNIVFSDVPNLQNVLCQKPCTSSFPDDLFKQFENAAPQLQSL 295
E++A +L + + +G + F VPNL + P ++L+ QF QL++L
Sbjct: 247 EITAASLVSFKYYGPL--IGLPFKSVPNLVDASFGGPFCQLTIENLY-QFSLYILQLETL 303
Query: 296 KY----------IPSSIATFGNLKQLEFIFYSGNEPYNIWKIIPVLIACPLLQIFNLTIR 345
++ P++ N+K LE + ++ + +L CPLL F L +
Sbjct: 304 RFDVGSAYLMREFPTNFPILSNVKHLEVTTAVSAVAHCLFPCLSLLKGCPLLHRFTLKVI 363
Query: 346 LGIHLYDAVNIEERTMKEIQKYHYSRLKEVEIGGFQGTETQLALALYFLKNAVELERMVI 405
++ + + K + + + LK VE+ GFQG ++ L LYFL+NA L+ ++I
Sbjct: 364 ----SCESTLVCRASQKVPEDHSHPCLKVVEVLGFQGNAAEVELVLYFLRNAAVLKNLII 419
Query: 406 SSCFWEYLTSSKR 418
S C YL S +
Sbjct: 420 SPCAPCYLRSPSQ 432
>30147.m013905 ubiquitin-protein ligase, putative
Length = 457
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 183/432 (42%), Gaps = 58/432 (13%)
Query: 1 EDCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDY 60
ED IS LP+EIL S+LS LT ++A +T +LSR+WR L+ S LNFDC L
Sbjct: 18 EDRISHLPEEILTSILSFLTTEEASRTSVLSRRWRILW-----TLTSSLNFDCTKIALGK 72
Query: 61 TKSHK--CQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGV 118
+ + F WV + L YK N+ F V+F L +D+W+ FA+ +
Sbjct: 73 KLDDRFALRSERTRFAMWVKRVLEVYKDSNLDEFIVSFDLTCNSRRSLDKWMNFAMSKTL 132
Query: 119 EQLKIICSCYGI-SYRKQHELYAFSFQHLSDASELKHLELNSCILKQDFNGQLHSLKFID 177
++L+I + + +R E Y+F ++ S I + + SL+ +
Sbjct: 133 KRLEISLAPFSSRKFRFHDECYSFP------------VDCYSFIRGPEGLSNISSLRSLC 180
Query: 178 LIFTPLDQSILLFILSMCCNLERLRLAWCLCPAVLSFCGPFLQLKMLTVSFCKGLEEIEL 237
L + + ++ L C LE+L +A L L+LK L + C L+ E+
Sbjct: 181 LRYVNMTGEVVEHFLLNCPLLEQLTVAVAYRLESLKVPASSLRLKYLEIFDCYHLKNFEI 240
Query: 238 SATNLTTLEVFGDRTNFNIVFSDVPNLQNVLCQKPCTS-------SFPDDLFKQFENAAP 290
A NL T+ ++ +N LQ V S +D F ++
Sbjct: 241 CAPNLVTI-LYNQGGRYN---GRRMKLQAVHLPHLLDLHLGGPELSITEDFFGACSSSFS 296
Query: 291 QLQSLKYIPSSI--------------ATFGNLKQLEFIFYSGNEPYNIWKIIPVLI---A 333
QL +LK + + + NL+ L F Y+I I+ V + +
Sbjct: 297 QLMTLKIVVTEVRMQECQVRLKFPKFPELTNLRHLGF-----KTEYDICSILAVRLLIKS 351
Query: 334 CPLLQIFNLTIRLGIHLYDAVNIEERTMKEIQKYHYSRLKEVEIGGFQGTETQLALALYF 393
PLL F L + G I+ R I H + LK VEI GF G + ++F
Sbjct: 352 SPLLNKFTLELADG----SRCQIKRRVRTGINCPHQN-LKVVEIVGFIGGAVEYEFIMFF 406
Query: 394 LKNAVELERMVI 405
L NA LE++++
Sbjct: 407 LDNASALEKIIL 418
>30147.m014083 conserved hypothetical protein
Length = 493
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 19/208 (9%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
+ IS+LPDE+L ++L + V DAV T LSR+WR L+ Y+ S + FD L
Sbjct: 13 NVISRLPDEVLQTILDKVPVIDAVSTGFLSRRWRDLW-KYI----SIIEFDPSWVELTGK 67
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGVEQL 121
+ V +N+F+ ++G I F V F P+ + ID WI FA+ VE+L
Sbjct: 68 E----------IVSSLNQFICLHRGIKIQRFSVKFTYQPEMSPSIDSWILFAINKHVEEL 117
Query: 122 KIICSCYGISYRKQHELYAFSFQHLS---DASELKHLELNSCILKQDFNGQLHSLKFIDL 178
+ + Q+ YA ++ L ++ L L L C L+ + QLHSLK + L
Sbjct: 118 DLDFDVADTNI-IQNTAYAPCYKLLPSVFNSKSLVSLILCFCDLELPTSIQLHSLKVLRL 176
Query: 179 IFTPLDQSILLFILSMCCNLERLRLAWC 206
L Q + + S L++L L+ C
Sbjct: 177 HRIELPQDAIQMLTSNAPVLQQLFLSDC 204
>30170.m013981 ubiquitin-protein ligase, putative
Length = 426
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 99/206 (48%), Gaps = 26/206 (12%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D IS LP +L +LS L+++DAV+T LSRKWR+ + H L FD K +
Sbjct: 16 DRISSLPGHVLDQILSQLSIRDAVRTSALSRKWRYKWAKIPH-----LVFDNKCVSI--- 67
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAF--CLGPKFAYDIDRWITFAVKLGVE 119
S V ++ L + GP I F+++ LG DIDRWI + ++
Sbjct: 68 PSQDQTLIKDKLVNIIDHVLLLHNGP-IQKFKLSHRDLLG---VSDIDRWILHLSRSSIK 123
Query: 120 QLKIICSCYGISYRKQHELYAFSFQHLSDASELKHLELNSCILKQ--DFNGQLHSLKFID 177
+ I+ G Y+ L FSF+HL HLEL +C+L+ F G SLK +D
Sbjct: 124 EF-ILEIWKGQRYKVPSSL--FSFEHLI------HLELFNCLLQPPLTFKG-FRSLKSLD 173
Query: 178 LIFTPLDQSILLFILSMCCNLERLRL 203
L L Q++ ++ C LERL L
Sbjct: 174 LQHITLTQNVFENLIFSCPLLERLTL 199
>27533.m000078 conserved hypothetical protein
Length = 539
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 111/464 (23%), Positives = 199/464 (42%), Gaps = 69/464 (14%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLY--LSYLHASRSEL-------NFD 52
D IS L + ++ +LS L +K + LLSR+W++L+ +S L+ + E+ +
Sbjct: 33 DYISNLLEVLILHILSFLPLKQWIVVSLLSRQWKYLWTKISILNLNEIEIISNIMKKDIF 92
Query: 53 CKSAGLDYTKSHKCQQYT-----CAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYD-- 105
C G D S++C ++ FV++V++ L + G I + R++F Y+
Sbjct: 93 CPLCG-DIPSSYRCLHHSRYAARSKFVEFVDRMLLLHSGSVIDTMRLSFLYDFHDGYNQR 151
Query: 106 IDRWITFAVKLGVEQLKIICSCY---------GISYR-----KQHELYAFSFQHLSDASE 151
ID W+ +A+ V++L++ S G++ R + +EL SF
Sbjct: 152 IDTWVRYALASNVKELELNFSDAEHFQFFDQKGLTVRHPDPPRPYELPCGSFA----PKI 207
Query: 152 LKHLELNSCILKQDFNGQLHSLKFIDLI-FTPLDQSILLFILSMCCNLERLRLAWCLCPA 210
LK L C + L SL+ + L LD SI I S C LE + L +CL P
Sbjct: 208 LKSFILTFCNFRTSNFNVLSSLQKLHLKQLKVLDGSI-EEIASKCPVLEDIILEYCLIPD 266
Query: 211 VLSFCGPFLQLKMLTVSFCKGLEEIELSAT--NLTTLEVFGDRTNFNIV--FSDVPNLQN 266
+++K L+V C E + +S + NL L + G+ N + + + + Q
Sbjct: 267 GFFVSKEDIKIKRLSVVHCASNERLRMSISTPNLVMLRIIGECLNSASIQKATHLIDAQI 326
Query: 267 VLCQKPCTSSFPDDLFKQFENAAPQLQSLKYIPSSIATFG--------------NLKQLE 312
+C T++ D QSL SI +K L+
Sbjct: 327 GICVI-YTNNADGDALNTLLRGLRHCQSLTVSTWSIQVLPIESTLQQQLPIPLRKVKHLK 385
Query: 313 FIFYSGNEPYNIWKIIPVLIACPLLQIFNLTIR-----LGIHLYDAV--NIEERTMKEIQ 365
I + + ++ +L +C L+I + LG L ++ +I E+T E Q
Sbjct: 386 LI--AAISKKELARLSCLLRSCSNLEILTAVLSGPLDLLGFELPNSATDDIFEQTFWESQ 443
Query: 366 KYHY----SRLKEVEIGGFQGTETQLALALYFLKNAVELERMVI 405
+ + LK++ + G G ++ + ++ LKNAV LE++++
Sbjct: 444 TLPFPCLRNSLKQLTVTGLMGRINEVEMIMFILKNAVALEKVIL 487
>44032.m000018 conserved hypothetical protein
Length = 337
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 118/265 (44%), Gaps = 26/265 (9%)
Query: 2 DCISQLPDEILASVLS*LTVK-DAVKTRLLSRKWRHLYLSYL----------HASRSELN 50
D ISQLP+ ++ +LS L K DA +T +LS++WR ++ SYL +
Sbjct: 70 DLISQLPNHVIHHILSLLRCKKDAARTSILSKRWRAIWASYLILDFDQRKFQKQEKKVRR 129
Query: 51 FDCKSAGLDYTKSHKCQQYTCAFVQ-WVNKFLNQYKGPNISSFRVAFC-LGPKFAYDIDR 108
KS + +K + AFV+ + + Q G I F++ + + +D+
Sbjct: 130 LSSKSKKRKEVEINKKNEMFRAFVENTLRTHIEQDSG--IQKFKLHLTSYNVELSAHVDQ 187
Query: 109 WITFAVKLGVEQLKI-ICSCYGISYRKQHELYAFSFQHLSDASELKHLELNSCILKQDFN 167
WI FA ++ L + I S Y ++A AS + L ++ C L+ +
Sbjct: 188 WIGFATTNNIKDLDLYIPSKKDRCYNLPQTVFA--------ASTITALRISGCKLRTCID 239
Query: 168 GQLHSLKFIDLIFTPLDQSILLFILSMCCNLERLRLAWCLCPAVLSFCGPFLQLKMLTVS 227
+L +L+ + +D ++ ++ C ++ LRL +C L +L + +
Sbjct: 240 IKLSNLQKLCFAKLRVDGQMIQNLMLSCPLIDDLRLIYCTGLKTLLLSSN--KLYRVDIH 297
Query: 228 FCKGLEEIELSATNLTTLEVFGDRT 252
FC GL+ +E+ + NL T G ++
Sbjct: 298 FCHGLKNVEVLSPNLQTFWYHGKKS 322
>30004.m000437 conserved hypothetical protein
Length = 193
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 65/128 (50%), Gaps = 17/128 (13%)
Query: 1 EDCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSY----LHASRSELNFDCKSA 56
+D IS LP+ IL +LS L DAVK+ +LSR WRH + S +H S N K A
Sbjct: 12 DDRISGLPEPILCHILSSLDTVDAVKSSILSRIWRHNWTSVADLKIHDSLCP-NRRSKRA 70
Query: 57 GLDYTKSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAY-DIDRWITFAVK 115
L + KS FV +N+ L +K P I R++ L ++ DI+ WI AV
Sbjct: 71 KLAHMKS---------FVDLLNRVLMLHKHPYIE--RLSLTLNNAYSTSDINSWILVAVT 119
Query: 116 LGVEQLKI 123
VE+L +
Sbjct: 120 HNVEELAL 127
>30138.m003851 ubiquitin-protein ligase, putative
Length = 421
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 11/120 (9%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D I+ LP I+ S+L+ L ++DAVKT +LS KWR Y A+ + L FD K +
Sbjct: 8 DFITDLPSSIIESILTRLPIRDAVKTSILSTKWR-----YRWATLTHLVFDDKCVAMYCD 62
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGVEQL 121
K V+++++ L + GP I F+++ + DID+W+ F + +++L
Sbjct: 63 KG----VLESRLVKFISRALFLHHGP-IHKFQLSTSYL-QCCPDIDQWLLFLSRSDIKEL 116
>30099.m001660 hypothetical protein
Length = 485
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 30/256 (11%)
Query: 4 ISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYTKS 63
I LPD I+ ++LS ++KD + +SR+ R+L S LN + + L T+
Sbjct: 10 IDDLPDHIVYNILSFFSLKDIARFSTVSRRCRNLCFSV-----PRLNINLTDSQLMLTER 64
Query: 64 HKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFA-------YDIDRWITFAVKL 116
K +V++++ +G N SF +++ Y +D W+ +
Sbjct: 65 IK-------MFDFVDRYMIHRRGTNFQSFALSWSFKKGSVTNLLTEDYRVDSWLRQVARC 117
Query: 117 GVEQLKIICSCYGISYRKQHELYAFSFQHLSDASELKHLELN--SCILKQDFNGQLHSLK 174
VE LK+ I++++ E + +D S LK+L +N + ILK G L+
Sbjct: 118 NVEGLKL-----SITFQESIESFDLPL-CFTDCSSLKYLSINLTNGILKLPATG-FRFLQ 170
Query: 175 FIDLIFTPLDQSILLFILSMCCNLERLRLAWCLCPAVLSFCGPFLQLKMLTVSFCKG--L 232
+ L + Q ++ +LS C L+RL +A L+ L+ L ++ + L
Sbjct: 171 VLILSAAQVQQDLVEEMLSSCKCLKRLIIANLNGLESLNLKSTCLEQLFLGITDTRANTL 230
Query: 233 EEIELSATNLTTLEVF 248
I +SA L L VF
Sbjct: 231 STINVSACRLNLLRVF 246