Jatropha Genome Database
- JcCB0104791.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0104791.10 + phase: 0 /partial
(325 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m014309 two-component system sensor histidine kinase/respo... 356 1e-98
29889.m003245 sensor histidine kinase, putative 169 1e-42
27647.m000179 two-component sensor histidine kinase bacteria, pu... 167 5e-42
30174.m008957 sensor histidine kinase, putative 147 6e-36
29848.m004559 two-component system sensor histidine kinase/respo... 144 8e-35
29929.m004752 two-component sensor histidine kinase bacteria, pu... 142 3e-34
29737.m001227 two-component system sensor histidine kinase/respo... 141 4e-34
29986.m001672 two-component sensor histidine kinase bacteria, pu... 134 6e-32
29929.m004754 two-component sensor histidine kinase bacteria, pu... 110 9e-25
30180.m001019 DNA binding protein, putative 84 1e-16
29751.m001898 DNA binding protein, putative 80 9e-16
29983.m003131 DNA binding protein, putative 79 3e-15
30054.m000786 transcription factor, putative 79 3e-15
29866.m000621 conserved hypothetical protein 77 1e-14
30130.m000280 sensory transduction histidine kinase, putative 70 2e-12
29805.m001503 sensory transduction histidine kinase, putative 69 3e-12
29660.m000765 hypothetical protein 69 4e-12
29736.m002100 two-component sensor protein histidine protein kin... 68 7e-12
30076.m004450 sensory transduction histidine kinase, putative 67 9e-12
29813.m001501 transcription factor, putative 65 5e-11
29950.m001149 transcription factor, putative 64 9e-11
30226.m001993 hypothetical protein 61 8e-10
29701.m000580 hypothetical protein 61 8e-10
29676.m001636 DNA binding protein, putative 61 9e-10
30147.m014021 two-component sensor protein histidine protein kin... 60 1e-09
30138.m004044 sensory transduction histidine kinase, putative 60 2e-09
27983.m000077 two-component system sensor histidine kinase/respo... 60 2e-09
29805.m001544 transcription factor, putative 60 2e-09
29758.m000642 Two-component response regulator ARR2, putative 59 2e-09
29904.m002952 transcription factor, putative 59 3e-09
29929.m004753 Two-component response regulator ARR14, putative 59 3e-09
28883.m000751 DNA binding protein, putative 59 4e-09
29780.m001324 conserved hypothetical protein 58 6e-09
29827.m002675 transcription factor, putative 57 9e-09
29805.m001543 transcription factor, putative 57 1e-08
29729.m002374 two-component system sensor histidine kinase/respo... 57 1e-08
30017.m000317 transcription factor, putative 57 2e-08
29680.m001711 DNA binding protein, putative 56 2e-08
29807.m000474 conserved hypothetical protein 56 2e-08
30169.m006598 transcription factor, putative 56 2e-08
29637.m000753 transcription factor, putative 55 3e-08
28582.m000316 transcription factor, putative 55 4e-08
29910.m000941 receptor histidine kinase, putative 54 8e-08
27973.m000086 DNA binding protein, putative 54 1e-07
29790.m000831 DNA binding protein, putative 53 2e-07
27914.m000409 transcription factor, putative 52 3e-07
30131.m007200 Two-component response regulator ARR8, putative 52 3e-07
30068.m002645 transcription factor, putative 52 3e-07
28582.m000317 transcription factor, putative 52 4e-07
29780.m001368 conserved hypothetical protein 52 4e-07
28094.m000169 two-component system sensor histidine kinase/respo... 52 5e-07
28582.m000318 conserved hypothetical protein 51 6e-07
29842.m003572 DNA binding protein, putative 51 9e-07
30170.m013948 hypothetical protein 50 1e-06
29814.m000747 DNA binding protein, putative 48 7e-06
>30147.m014309 two-component system sensor histidine kinase/response
regulator, putative
Length = 754
Score = 356 bits (913), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 194/332 (58%), Positives = 225/332 (67%), Gaps = 20/332 (6%)
Query: 1 MGSESLPPSQSQNQKTSRLRLHILIVDDDSTTLAIVSSMLKLCTLQDRMIELSIVTIKNP 60
MG + + S N+ +S L + ILIVDDD+ TL IVSSMLK C+LQ +VT+KNP
Sbjct: 1 MGRGRVASTHSHNKNSSLLTVQILIVDDDAPTLGIVSSMLKTCSLQ-------VVTVKNP 53
Query: 61 LLALEKLQDKDGAFDLVITDLHMPEMNGLELQKQVKEKFKIPVILMSVDDKGSVISESLE 120
L AL LQ DGAFDLVITDLHMP MNG++LQKQ+ E+FKIPV++MS D K S I ESLE
Sbjct: 54 LDALSSLQSSDGAFDLVITDLHMPGMNGIQLQKQIDEEFKIPVVIMSSDGKRSAILESLE 113
Query: 121 SGALLYIVKPVNQGDLKNVIDCAVAAKKGKSIATEEMTNFEEGNSSSSNDEKDYLNGADS 180
SGA+ Y+VKPVN DLKNV A+A+KKGK + E +G +S+S EKD D+
Sbjct: 114 SGAVYYMVKPVNLRDLKNVWQYAMASKKGKEVVVAEEPENNDGEASAST-EKDSC--EDN 170
Query: 181 SSSAASVNGDNSQXXXXXXXXXXXXXXXXXXXXXXXXXXXVVWTNSLHNRFLQAINHIGL 240
+S++ S N + S VVWTNSLHNRFLQAINHIGL
Sbjct: 171 NSASVSAN-EESNNKKKKGKKRARDHDQGEDAPSAPKKAKVVWTNSLHNRFLQAINHIGL 229
Query: 241 EKAVPKRILEFMGVPGLTRENVASHLQKYRLFLKKVAERGLWSSQ-LSEKAFRSSFASGY 299
+KAVPKRILEFM VPGLTRENVASHLQKYRLFLKKVAERGLWSSQ LSE+A RSSFASGY
Sbjct: 230 DKAVPKRILEFMNVPGLTRENVASHLQKYRLFLKKVAERGLWSSQALSERAMRSSFASGY 289
Query: 300 CSSLFKNAHQDY--------MMRAFHPGYGGN 323
S KNAHQDY + F PGYGGN
Sbjct: 290 SSMFLKNAHQDYSQLPGLQQLRPTFQPGYGGN 321
>29889.m003245 sensor histidine kinase, putative
Length = 682
Score = 169 bits (429), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 141/257 (54%), Gaps = 17/257 (6%)
Query: 21 LHILIVDDDSTTLAIVSSMLKLCTLQDRMIELSIVTIKNPLLALEKLQDKDGAFDLVITD 80
L +L+VDDD T L I+ ML+ C + + AL L++ +D+VI+D
Sbjct: 33 LRVLVVDDDPTCLMILEKMLRTCLYE-------VTKCNRAETALSLLRENKNGYDIVISD 85
Query: 81 LHMPEMNGLELQKQVKEKFKIPVILMSVDDKGSVISESLESGALLYIVKPVNQGDLKNVI 140
+HMP+M+G +L + + + +PVI+MS D+ SV+ + + GA Y++KPV LKN+
Sbjct: 86 VHMPDMDGFKLLEHIGLEMDLPVIMMSADEAKSVVMKGVTHGACDYLIKPVRIEALKNIW 145
Query: 141 DCAVAAKKGKSIATEEMTNFEEGNSSSSNDEKDYLNGADSSSSAASVNGDNSQXXXXXXX 200
V K+ + E+ + EEG+ E AD SSSA N NS+
Sbjct: 146 QHVVRKKRNEWKDLEQSGSVEEGDRQPKQSED-----ADYSSSANEGNWRNSKKRKDEEE 200
Query: 201 XXXXXXXXXXXXXXXXXXXXVVWTNSLHNRFLQAINHIGLEKAVPKRILEFMGVPGLTRE 260
VVW+ LH +F+ A+N +G++KAVPK+ILE M VPGLTRE
Sbjct: 201 EGDERDDTSTLKKPR-----VVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRE 255
Query: 261 NVASHLQKYRLFLKKVA 277
NVASHLQKYRL+L++++
Sbjct: 256 NVASHLQKYRLYLRRLS 272
>27647.m000179 two-component sensor histidine kinase bacteria,
putative
Length = 669
Score = 167 bits (424), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 146/270 (54%), Gaps = 16/270 (5%)
Query: 21 LHILIVDDDSTTLAIVSSMLKLCTLQDRMIELSIVTIKNPLLALEKLQDKDGAFDLVITD 80
L +L+VDDD+T L I+ ML+ C + T +AL L+++ G FD+V++D
Sbjct: 43 LRVLVVDDDTTCLRILEQMLRRCLYH-------VTTCSQAKVALNLLRERKGCFDVVLSD 95
Query: 81 LHMPEMNGLELQKQVKEKFKIPVILMSVDDKGSVISESLESGALLYIVKPVNQGDLKNVI 140
+HMP+M+G +L + V + +PVI+MS D + S + + GA Y++KP+ + +LKN+
Sbjct: 96 VHMPDMDGFKLLEHVGLEMDLPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIW 155
Query: 141 DCAVAAKKGKSIATEEMTNFEEGNS-SSSNDEKDYLNGADSSSSAASVNGDNSQXXXXXX 199
V K ++ E + E+ + N++ +Y +SS G
Sbjct: 156 QHVVRKKWHENKEIEHSGSLEDNDRHKRGNEDAEY-----TSSVNEGTEGVLKGQKRRSN 210
Query: 200 XXXXXXXXXXXXXXXXXXXXXVVWTNSLHNRFLQAINHIGLEKAVPKRILEFMGVPGLTR 259
VVW+ LH +F+ A+N +G++KAVPKRILE M VPGLTR
Sbjct: 211 SKDEDDGEPDSDDPSTSKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTR 270
Query: 260 ENVASHLQKYRLFLKK---VAERGLWSSQL 286
ENVASHLQK+RL+LK+ VA++G SS
Sbjct: 271 ENVASHLQKFRLYLKRLSGVAQQGGISSTF 300
>30174.m008957 sensor histidine kinase, putative
Length = 437
Score = 147 bits (372), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 143/259 (55%), Gaps = 18/259 (6%)
Query: 23 ILIVDDDSTTLAIVSSMLKLCTLQDRMIELSIVTIKNPLLALEKLQDKDGAFDLVITDLH 82
IL+VD DS LAIVS ML + + ++T K AL L+++ DL++T++H
Sbjct: 21 ILVVDCDSACLAIVSKMLYISGYK-------VITAKRATDALHILRERQYELDLILTEVH 73
Query: 83 MPEMNGLELQKQVKEKFKIPVILMSVDDKGSVISESLESGALLYIVKPVNQGDLKNVIDC 142
+P+M+ EL + + E +P++++S DD + + L GA+ Y++KP+ D+K++
Sbjct: 74 LPDMDKYELLETMAEVSCLPIVILSADDDENAMLGCLFKGAVFYLLKPITMNDVKSLWQF 133
Query: 143 AVAAKKGKSIATEEMTNFEEGNSS---SSNDEKDYLNGADSSSSAASVNGDNSQXXXXXX 199
+ + ++ATE ++ G+S+ +SN+ + L+ D+S N+Q
Sbjct: 134 SCVKNRKNNVATEGSHSYH-GHSTPEIASNEASECLSVLDTSQQ-------NAQKSEGKE 185
Query: 200 XXXXXXXXXXXXXXXXXXXXXVVWTNSLHNRFLQAINHIGLEKAVPKRILEFMGVPGLTR 259
++WTN LH+RFLQAI +G++ A PK+IL+ M VPGL +
Sbjct: 186 LQEMDKDEEATVTSTFPKKPKLIWTNELHDRFLQAIRILGIDSAHPKKILKHMNVPGLRK 245
Query: 260 ENVASHLQKYRLFLKKVAE 278
EN++SHLQKYRL LK+ E
Sbjct: 246 ENISSHLQKYRLSLKREQE 264
>29848.m004559 two-component system sensor histidine kinase/response
regulator, putative
Length = 663
Score = 144 bits (362), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 133/257 (51%), Gaps = 19/257 (7%)
Query: 21 LHILIVDDDSTTLAIVSSMLKLCTLQDRMIELSIVTIKNPLLALEKLQDKDGAFDLVITD 80
+ +L VDDD T L ++ + L+ C + + T + AL+ L++ FDLVI+D
Sbjct: 18 MRVLAVDDDPTCLLVLETFLRRC-------QYHVTTTSQAISALKMLRENKNKFDLVISD 70
Query: 81 LHMPEMNGLELQKQVKEKFKIPVILMSVDDKGSVISESLESGALLYIVKPVNQGDLKNVI 140
+HMP+M+G +L + V + +PVI++S ++ + + GA Y++KPV +LKN+
Sbjct: 71 VHMPDMDGFKLLELVGLEMDLPVIMLSAYSDPKLVMKGITHGACDYLLKPVRIEELKNIW 130
Query: 141 DCAVAAKKGKSIATEEMTNFEEGNSSSSNDEKDYLNGADSSSSAASVNGDNSQXXXXXXX 200
+ KK + ++ NF D +D L ++A +
Sbjct: 131 QHVIRRKK---VDNKDQNNF---------DNQDKLPRGSGEATADQKLNKKRKDQNEDED 178
Query: 201 XXXXXXXXXXXXXXXXXXXXVVWTNSLHNRFLQAINHIGLEKAVPKRILEFMGVPGLTRE 260
VVW+ LH +F+ A+N +G++KAVPK+IL+ M V LTRE
Sbjct: 179 EDRDEHGHENEDPTTQKKPRVVWSVELHRKFVAAVNQLGVDKAVPKKILDLMNVEKLTRE 238
Query: 261 NVASHLQKYRLFLKKVA 277
NVASHLQKYRL+LK+++
Sbjct: 239 NVASHLQKYRLYLKRIS 255
>29929.m004752 two-component sensor histidine kinase bacteria,
putative
Length = 584
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 139/261 (53%), Gaps = 26/261 (9%)
Query: 21 LHILIVDDDSTTLAIVSSMLKLCTLQDRMIELSIVTIKNPLLALEKLQDKDGAFDLVITD 80
L +L+VDDD T L I+ MLK C+ + + T AL L+++ +D+VI+D
Sbjct: 17 LRVLVVDDDPTWLKILEKMLKKCSYE-------VTTCGLARDALYLLRERKDGYDIVISD 69
Query: 81 LHMPEMNGLELQKQVKEKFKIPVILMSVDDKGSVISESLESGALLYIVKPVNQGDLKNVI 140
++MP+M+G +L + V + +PVI+MSVD + S + + ++ GA Y++KP+ +L+N+
Sbjct: 70 VNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIW 129
Query: 141 DCAVAAKKGKSIAT----EEMTNFEEGNSSSSNDEKDYL-NGADSSSSAASVNGDNSQXX 195
V KK + E M + + S + + YL G D +S + +N
Sbjct: 130 Q-HVFRKKIHEVRDIEILEGMESIQMARIGSDHSDDGYLFCGEDLTSVKKRKDIENKH-- 186
Query: 196 XXXXXXXXXXXXXXXXXXXXXXXXXVVWTNSLHNRFLQAINHIGLEKAVPKRILEFMGVP 255
VVW+ LH +F++A+N IG +K PK+IL+ M VP
Sbjct: 187 -----------DDKDGESSTTKKARVVWSVDLHQKFVKAVNQIGPDKVGPKKILDLMNVP 235
Query: 256 GLTRENVASHLQKYRLFLKKV 276
LTRENVASHLQKYRL+L ++
Sbjct: 236 WLTRENVASHLQKYRLYLSRL 256
>29737.m001227 two-component system sensor histidine kinase/response
regulator, putative
Length = 676
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 136/266 (51%), Gaps = 27/266 (10%)
Query: 21 LHILIVDDDSTTLAIVSSMLKLCTLQDRMIELSIVTIKNPLLALEKLQDKDGAFDLVITD 80
+ +L VDDD L ++ ++LK C Q + T + AL+ L++ +DLVI+D
Sbjct: 18 MRVLAVDDDPICLKVLDTLLKKCQYQ-------VTTTNQAIQALKMLRENRNKYDLVISD 70
Query: 81 LHMPEMNGLELQKQVKEKFKIPVILMSVDDKGSVISESLESGALLYIVKPVNQGDLKNVI 140
++MP+M+G +L + V + +PVI++S ++ + + GA+ Y++KPV +LKN+
Sbjct: 71 VNMPDMDGFKLLELVGLEMDLPVIMLSAHSDKELVYKGVTHGAVDYLLKPVRIEELKNIW 130
Query: 141 DCAVAAKKGKSIATEEMTNFEEGNSSSSNDEKDYLNGADSSSSAASVNGDNSQXXXXXXX 200
+ KK + + S S ++ L+GA S +G Q
Sbjct: 131 QHVIRRKK-----------LQPKDQSRSQNQDKPLDGAGEGGQGMSSSGSEDQNGKVNRK 179
Query: 201 XXXXXXXXXXXXXX---------XXXXXXVVWTNSLHNRFLQAINHIGLEKAVPKRILEF 251
VVW+ LH +F+ A+N +GL+KAVPK+IL+
Sbjct: 180 RKDQDEDEEEEGEDNLNDTDEPGAQKKPRVVWSVELHRKFVAAVNQLGLDKAVPKKILDL 239
Query: 252 MGVPGLTRENVASHLQKYRLFLKKVA 277
M V GLTRENVASHLQKYRL+LK+++
Sbjct: 240 MNVEGLTRENVASHLQKYRLYLKRIS 265
>29986.m001672 two-component sensor histidine kinase bacteria,
putative
Length = 473
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 130/258 (50%), Gaps = 20/258 (7%)
Query: 21 LHILIVDDDSTTLAIVSSMLKLCTLQDRMIELSIVTIKNPLLALEKLQDKDGAFDLVITD 80
L +L+VDDD T L I+ ML+ C + + + AL L++ FD+V+ D
Sbjct: 35 LRVLVVDDDRTCLLILEKMLRNCLYK-------VTKCRKAKDALSMLREDKNKFDIVVID 87
Query: 81 LHMPEMNGLELQKQVKEKFKIPVILMSVDDKGSVISESLESGALLYIVKPVNQGDLKNVI 140
LHMP+M+G EL + + + +PV++MS DD VI + + GA Y++KPV LK +
Sbjct: 88 LHMPDMDGFELLEIAEFEMGLPVVMMSSDDDHEVIKKGVLHGACDYLIKPVRMEALKMIW 147
Query: 141 DCAVAAKKGKSIATEEMTNFEEGNSSSSNDEKDYLNGADSSSSAASVNGDNSQXXXXXXX 200
+ +K K+ A +E+ D+ L DS N +N++
Sbjct: 148 QHVI--RKKKNTAKDELEQL-----IGLEDDILLLTKPDSDDDMIHGNLNNTR---NSKR 197
Query: 201 XXXXXXXXXXXXXXXXXXXXVVWTNSLHNRFLQAINHIGLEKAVPKRILEF---MGVPGL 257
++WT LH +F++A NH+G E AVP +ILE M V +
Sbjct: 198 RRNNEYDDEPSDPAATGKKRMIWTEELHEKFVRAFNHLGHENAVPLKILECLQRMNVHSI 257
Query: 258 TRENVASHLQKYRLFLKK 275
TRE++ASHLQKYR++L+K
Sbjct: 258 TREHIASHLQKYRMYLRK 275
>29929.m004754 two-component sensor histidine kinase bacteria,
putative
Length = 419
Score = 110 bits (275), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 125/275 (45%), Gaps = 39/275 (14%)
Query: 21 LHILIVDDDSTTLAIVSSMLKLCTLQDRMIELSIVTIKNPLLALEKLQDKDGAFDLVITD 80
L +L+VD+D T I+ MLK C+ Q V AL L+ + +D+VI D
Sbjct: 18 LRVLVVDNDPTWSRILEKMLKKCSYQ--------VATCGSRDALNMLRGRKDEYDIVICD 69
Query: 81 LHMPEMNGLELQKQVKEKFKIPVILMSVDDKGSVISESLESGALLYIVKPVNQGDLKNVI 140
+ +M+G L + + K PVI S S + + + GA Y++KP+ +L+N+
Sbjct: 70 VTTSDMDGFRLLEHIGLKMDCPVINASALXXASALQKGVRHGACDYLLKPIRMKELRNIW 129
Query: 141 DCAVAAKKGKSIATEEMTNFEEGNSSSSNDEKDYLNGADSSSSAASVNGDNSQXXXXXXX 200
V K+ + E+ ++ L G D +S D
Sbjct: 130 Q-HVFRKRIHEVRECEILGSDQACDGP------LLRGEDLASVKKRKYADQK-------- 174
Query: 201 XXXXXXXXXXXXXXXXXXXXVVWTNSLHNRFLQAINHIGLEKAVPKRILEFMGVPGLTRE 260
+VWT LH +F++A++ IG +K PK+IL+ M VP LTRE
Sbjct: 175 ----------ADISSAKMARLVWTVDLHQKFVKAVHQIGFDKIGPKKILDRMNVPWLTRE 224
Query: 261 NVASHLQKYRLFLKKVAER------GLWSSQLSEK 289
NVA HLQKYRL+L ++ GL+SS L ++
Sbjct: 225 NVAGHLQKYRLYLSRLQTEKDLKFAGLYSSVLKKQ 259
>30180.m001019 DNA binding protein, putative
Length = 315
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 46/56 (82%)
Query: 221 VVWTNSLHNRFLQAINHIGLEKAVPKRILEFMGVPGLTRENVASHLQKYRLFLKKV 276
+VWT LH RF+ A+ H+G++ AVPK I++ M V GLTRENVASHLQKYRL+LK++
Sbjct: 107 LVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRM 162
>29751.m001898 DNA binding protein, putative
Length = 316
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 45/56 (80%)
Query: 221 VVWTNSLHNRFLQAINHIGLEKAVPKRILEFMGVPGLTRENVASHLQKYRLFLKKV 276
+VWT LH RF+ + ++G++ AVPK I++ M V GLTRENVASHLQKYRL+LK++
Sbjct: 158 LVWTPQLHKRFVDVVAYLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRM 213
>29983.m003131 DNA binding protein, putative
Length = 424
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 46/69 (66%), Gaps = 4/69 (5%)
Query: 221 VVWTNSLHNRFLQAINHIGLEKAVPKRILEFMGVPGLTRENVASHLQKYR----LFLKKV 276
V WT LH RF+QA+ +G++KAVP RILE MG+ LTR N+ASHLQKYR L +
Sbjct: 152 VDWTPDLHRRFVQAVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQKYRSHRKHLLARE 211
Query: 277 AERGLWSSQ 285
AE WS +
Sbjct: 212 AEAATWSHR 220
>30054.m000786 transcription factor, putative
Length = 478
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 124/300 (41%), Gaps = 48/300 (16%)
Query: 21 LHILIVDDDSTTLAIVSSMLKLCTLQDRMIELSIVTIKNPLLALEKLQDKDGAFDLVITD 80
L +L++++DS + + S L+ D ++ L N AL + DK +F + I +
Sbjct: 18 LRVLLLEEDSISAEEIKSKLEA---MDYIVSL----FCNENEALSAISDKPESFHVAIVE 70
Query: 81 LHMPEMNG----LELQKQVKEKFKIPVILMSVDDKGSVISESLESGALLYIVKPVNQGDL 136
+ NG LE K +P I+ S S + + + GA+ ++ KP+++ L
Sbjct: 71 VSTSNSNGNFKFLETAKD------LPTIMTSNIHCLSTMMKCIALGAVEFLRKPLSEEKL 124
Query: 137 KNVIDCAVAAK-----------------KGKSIA-----TEEMTN--FEEGNSSSSNDEK 172
+N+ V G SI TEE N E + S E
Sbjct: 125 RNIWQHVVHKAFNAGGNVVSDSLKPVNDSGASIPQLKVETEERKNKNLERTENVSPAHEN 184
Query: 173 DY----LNGADSSSSAASVNGDNSQXXXXXXXXXXXXXXXXXXXXXXXXXXXVVWTNSLH 228
+Y L+ + S + S V WT LH
Sbjct: 185 EYEQSPLSDKYPAPSTPQLKQGASSDGSAENPNKASRHHKSYGTKVNRKKMKVDWTPELH 244
Query: 229 NRFLQAINHIGLEKAVPKRILEFMGVPGLTRENVASHLQKYRLFLKKVAER---GLWSSQ 285
+F+QA+ +G+++A+P RILE M V GLTR NVASHLQK+R+ + + + WS Q
Sbjct: 245 KKFVQAVEQLGVDQAIPSRILEMMKVEGLTRHNVASHLQKFRMHKRHILPKENDRRWSQQ 304
>29866.m000621 conserved hypothetical protein
Length = 667
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 28/188 (14%)
Query: 18 RLRLHILIVDDDSTTLAIVSSMLKLCTLQDRMIELSIVTIKNPLLALEKLQDKDGAFDLV 77
R+ L +L+V+ D +T I++++L+ C+ + + + + L A E L+ K DL+
Sbjct: 41 RMVLRVLLVEADDSTRQIIAALLRKCSYK-------VAAVPDGLKAWEMLKGKPHNIDLI 93
Query: 78 ITDLHMPEMNGLELQKQVKEK---FKIPVILMSVDDKGSVISESLESGALLYIVKPVNQG 134
+T++ +P ++G L + E IPVI+MS D S + + + GA Y+VKP+ +
Sbjct: 94 LTEVELPSISGYALLTLIMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPIRKN 153
Query: 135 DLKNVI-------------DCAVAAKKGKSIATEEMTNFEEGNSSSSN-----DEKDYLN 176
+L+N+ +C G+ A N E N SS + + KD+
Sbjct: 154 ELRNLWQHVWRRQSSLARENCPQEESVGQDTAEATSENNPESNHSSGDVARLQNNKDFEK 213
Query: 177 GADSSSSA 184
G+DS SS
Sbjct: 214 GSDSQSSC 221
>30130.m000280 sensory transduction histidine kinase, putative
Length = 807
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 98/193 (50%), Gaps = 33/193 (17%)
Query: 21 LHILIVDDDSTTLAIVSSMLKLCTLQDRMIELSIVTIKNPLLALEKLQDKDGAFDLVITD 80
L +L+V++D +T +VS++L+ C+ + + + N A + L+D + DLV+T+
Sbjct: 74 LKVLLVENDDSTRHVVSALLRNCSYE-------VNAVANGFQAWKILEDMNNHTDLVLTE 126
Query: 81 LHMPEMNGLELQKQVKEK---FKIPVILMSVDDKGSVISESLESGALLYIVKPVNQGDLK 137
+ MP ++G+ L +++ IPVI+MS D ++ + L GA+ ++VKP+ + +LK
Sbjct: 127 VVMPILSGIGLLCKIRNHKTLRNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELK 186
Query: 138 NVID-----C-----------AVAAKKGKSIATEEMTNFEEGNSSSSNDEKDY-LNGADS 180
N+ C K K+ + EE E NS SS++ DY NG
Sbjct: 187 NLWQHVWRRCHSSSGSGSESGTQTKKSAKTKSNEE----SENNSDSSDELGDYGSNGP-- 240
Query: 181 SSSAASVNGDNSQ 193
S+ S NG +Q
Sbjct: 241 SNRDGSDNGSGTQ 253
>29805.m001503 sensory transduction histidine kinase, putative
Length = 762
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 73/122 (59%), Gaps = 10/122 (8%)
Query: 21 LHILIVDDDSTTLAIVSSMLKLCTLQDRMIELSIVTIKNPLLALEKLQDKDGAFDLVITD 80
L +L+V++D +T +V+++L+ C+ + ++ N L A L+D DLV+T+
Sbjct: 88 LKVLLVENDYSTRHVVTALLRNCSYE-------VIEATNGLQAWRILEDLTNQIDLVLTE 140
Query: 81 LHMPEMNGLELQKQV---KEKFKIPVILMSVDDKGSVISESLESGALLYIVKPVNQGDLK 137
+ MP ++G+ L ++ K + +PVI+MS D ++ + L GA+ ++VKP+ + +LK
Sbjct: 141 VVMPCLSGIGLLYKIMSHKTRKNVPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELK 200
Query: 138 NV 139
N+
Sbjct: 201 NL 202
>29660.m000765 hypothetical protein
Length = 549
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 43/63 (68%)
Query: 221 VVWTNSLHNRFLQAINHIGLEKAVPKRILEFMGVPGLTRENVASHLQKYRLFLKKVAERG 280
V+WT LH +F AI+ +G +KA PK ILE M VP LT+ VASHLQKY+ ++++ E G
Sbjct: 209 VLWTPELHLKFTAAISALGDKKARPKPILEMMNVPHLTQRQVASHLQKYKSQVRRICETG 268
Query: 281 LWS 283
S
Sbjct: 269 TTS 271
>29736.m002100 two-component sensor protein histidine protein
kinase, putative
Length = 258
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 82/161 (50%), Gaps = 5/161 (3%)
Query: 21 LHILIVDDDSTTLAIVSSMLKLCTLQDRMIELSIVTIKNPLLALEKLQDKDG-AFDLVIT 79
+H+L VDD ++ +LK+ + + ++ ++ L EK G DL+IT
Sbjct: 29 VHVLAVDDSLVDRKVIERLLKITSCKVTAVDSGRRALQFLGLDEEKSTSIQGLKVDLIIT 88
Query: 80 DLHMPEMNGLELQKQVKEK--FK-IPVILMSVDDKGSVISESLESGALLYIVKPVNQGDL 136
D MP M G EL K++KE F+ IPV++MS ++ + I LE GA ++VKPV D+
Sbjct: 89 DYCMPGMTGYELLKKIKESSTFREIPVVIMSSENVMARIDRCLEEGAEDFLVKPVKLSDV 148
Query: 137 KNVIDCAVAAK-KGKSIATEEMTNFEEGNSSSSNDEKDYLN 176
K + D A + K KS T N GN+ + +D +
Sbjct: 149 KRIRDYMTARELKLKSQQTSHNFNNSTGNNVNKRKSRDSFD 189
>30076.m004450 sensory transduction histidine kinase, putative
Length = 697
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 70/122 (57%), Gaps = 10/122 (8%)
Query: 21 LHILIVDDDSTTLAIVSSMLKLCTLQDRMIELSIVTIKNPLLALEKLQDKDGAFDLVITD 80
L +L+V+ D +T I+S++L+ C+ + + + + L+A E L+D DL++T+
Sbjct: 41 LRVLLVEADYSTRQIISALLRKCSYR-------VAAVPDGLMAWETLKDGPNNIDLILTE 93
Query: 81 LHMPEMNGLELQKQVKEK---FKIPVILMSVDDKGSVISESLESGALLYIVKPVNQGDLK 137
+ +P ++G L V E IPVI+MS D S + + + GA +++KPV + +LK
Sbjct: 94 VDLPLISGYALLTLVMEHDFCKNIPVIMMSSHDSISKVLKCMLKGAADFLIKPVRRNELK 153
Query: 138 NV 139
N+
Sbjct: 154 NL 155
>29813.m001501 transcription factor, putative
Length = 361
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 223 WTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYRL 271
WT LH RF++A+N +G +KA PK ++ MG+PGLT ++ SHLQKYRL
Sbjct: 25 WTPELHQRFVEAVNQLGGADKATPKSLMRVMGIPGLTLYHLKSHLQKYRL 74
>29950.m001149 transcription factor, putative
Length = 419
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 223 WTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYRL 271
WT+ LH F++A+N +G +KA PK +++ MG+PGLT ++ SHLQKYRL
Sbjct: 51 WTSDLHEHFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 100
>30226.m001993 hypothetical protein
Length = 295
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 221 VVWTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYRL 271
+ WT LH RF++ ++ +G EKA PK IL+ MGV GLT +V SHLQKYR+
Sbjct: 226 IKWTQDLHKRFVECVDRLGGAEKATPKLILKLMGVQGLTIFHVKSHLQKYRI 277
>29701.m000580 hypothetical protein
Length = 164
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 223 WTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYRL 271
WT LH+RF +A+N +G ++A PK IL+ M +PGLT +V SHLQKYR+
Sbjct: 16 WTQELHDRFERAVNQLGGPDRATPKGILKAMSIPGLTIYHVKSHLQKYRI 65
>29676.m001636 DNA binding protein, putative
Length = 370
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 222 VWTNSLHNRFLQAINHIGLEK-AVPKRILEFMGVPGLTRENVASHLQKYRLFLKKV 276
W+ LH RF+ A++ +G + A PK+I E M V GLT + V SHLQKYRL ++K+
Sbjct: 235 CWSPELHRRFIDALHQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHIRKL 290
>30147.m014021 two-component sensor protein histidine protein
kinase, putative
Length = 221
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 5/124 (4%)
Query: 21 LHILIVDDDSTTLAIVSSMLKLCTLQDRMIELSIVTIKNPLLALEK--LQDKDGAFDLVI 78
LH+L VDD ++ +LK+ + + ++ ++ L EK + D +L++
Sbjct: 27 LHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGTRALQYLGLDGEKSSVGFNDLKVNLIM 86
Query: 79 TDLHMPEMNGLELQKQVKEK--FK-IPVILMSVDDKGSVISESLESGALLYIVKPVNQGD 135
TD MP M G EL K++KE F+ IPV++MS ++ + I LE GA +IVKPV D
Sbjct: 87 TDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILTRIDRCLEEGAEEFIVKPVKLSD 146
Query: 136 LKNV 139
+K +
Sbjct: 147 VKRL 150
>30138.m004044 sensory transduction histidine kinase, putative
Length = 550
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 71/125 (56%), Gaps = 10/125 (8%)
Query: 18 RLRLHILIVDDDSTTLAIVSSMLKLCTLQDRMIELSIVTIKNPLLALEKLQDKDGAFDLV 77
R ++ IL+ D+DS + V ++L C+ Q + ++++ ++ L + D++
Sbjct: 19 RSKVRILLCDNDSKSSEEVFTLLLKCSYQ-------VTSVRSARQVIDALNAEGPDIDII 71
Query: 78 ITDLHMPEMNGLELQKQV---KEKFKIPVILMSVDDKGSVISESLESGALLYIVKPVNQG 134
++++ +P G+++ K + KE +IPVI+MS D+ S++ + L GA Y+VKP+
Sbjct: 72 LSEVDLPMNKGMKMLKYITRDKELRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTN 131
Query: 135 DLKNV 139
+L N+
Sbjct: 132 ELLNL 136
>27983.m000077 two-component system sensor histidine kinase/response
regulator, putative
Length = 132
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 20/138 (14%)
Query: 21 LHILIVDDDSTTLAIVSSML------KLCTLQDRMIELSIVTIKNPLLALEKLQDKDGAF 74
LH L+VDD ST I+ ++L K+ +D L ++ K+ L+ +
Sbjct: 5 LHFLVVDDFSTMRRILVNLLRELGHSKISEAEDGEKALQLLLAKDALIGI---------- 54
Query: 75 DLVITDLHMPEMNGLELQKQVKEK---FKIPVILMSVDDKGSVISESLESGALLYIVKPV 131
D+V+TD +MP M G L ++++E ++PVIL++ + K I + +GA YIVKP
Sbjct: 55 DIVVTDWNMPVMGGFTLLQRIREHPDLHQLPVILVTAEAKKENIISAAAAGADGYIVKPF 114
Query: 132 NQGDLKNVIDCAVAAKKG 149
N LK ID V K+G
Sbjct: 115 NAATLKEKID-RVLRKRG 131
>29805.m001544 transcription factor, putative
Length = 336
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 223 WTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYRL 271
WT+ LH RF+ A+ +G ++A PK +L MGV GLT +V SHLQKYRL
Sbjct: 54 WTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 103
>29758.m000642 Two-component response regulator ARR2, putative
Length = 659
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 15/145 (10%)
Query: 52 LSIVTIKNPLLALEKLQDKDGAFDLVITDLHMPEMNGLELQKQV---KEKFKIPVILMSV 108
+++ + N L A + L+D DL+++++ MP ++G+ L ++ + IPVI+MS
Sbjct: 1 MAVTAVANGLQAWKLLEDLTNHIDLILSEVAMPCLSGIGLLCKIMNHRTCKNIPVIMMSS 60
Query: 109 DDKGSVISESLESGALLYIVKPVNQGDLKNVID-----C--AVAAKKGKSIATEEMTNFE 161
D +V+ + L GAL ++VKP+ + +LKN+ C + + I T + T+ E
Sbjct: 61 HDSMNVVFKCLSKGALDFLVKPIRKNELKNLWQHVWRKCHSSSGSGSESDIRTRKSTSPE 120
Query: 162 EG-NSSSSNDEKDY----LNGADSS 181
E N++ SNDE D LN D S
Sbjct: 121 ESDNNTGSNDEDDIGSTGLNARDGS 145
>29904.m002952 transcription factor, putative
Length = 303
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 223 WTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYRLFLKKVAE 278
WT LH RF+ A+ +G +KA PK I+ MGV GLT ++ SHLQKYRL + E
Sbjct: 43 WTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGRQSCKE 99
>29929.m004753 Two-component response regulator ARR14, putative
Length = 338
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 31/227 (13%)
Query: 21 LHILIVDDDSTTLAIVSSMLKLCTLQDRMIELSIVTIKNPLLALEKLQDKDGAFDLVITD 80
L +++VDDD T L+I+ MLK C+ E++ +LAL L++ +D+VI+D
Sbjct: 17 LRVVVVDDDPTWLSILERMLKRCSC-----EVTTCCSARDVLAL--LRENRYGYDIVISD 69
Query: 81 LHMPEMN--------GLELQKQVKEKFKIPVILMSVDDKGSVISESLESGALLYIVKPVN 132
+ MP M+ G L + +F + +SVD + S + ++ GA Y++KP+
Sbjct: 70 VIMPGMDVFLHLLFIGSMLLTEHLYRFTV----ISVDGERSRVMRGIQLGACEYLLKPIR 125
Query: 133 QGDLKNVIDCAVAAKKGKSIATEEMTNFEEGNSSSSNDEKDYLNGADSSSSAASVNGDNS 192
+L+N+ K K I E + EG + +NG D S+ + G+N
Sbjct: 126 MKELRNICQHVFRRKIQKEIDIESI----EGTIQV----QMAINGLDKSNGGHLLCGENL 177
Query: 193 QXXXXXXXXXXXXXXXXXXXXXXXXXXXVVWTNSLHNRFLQAINHIG 239
V++ H +F +A+N IG
Sbjct: 178 TSVKIGKEVQNKHDDKGPGGNFSTKKSAVIF----HQKFDKAVNQIG 220
>28883.m000751 DNA binding protein, putative
Length = 393
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 222 VWTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYRLFLKK 275
W+ LH RFL A+ +G A PK+I E M V GLT + V SHLQKYRL ++
Sbjct: 237 CWSPELHRRFLHALQQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRR 291
>29780.m001324 conserved hypothetical protein
Length = 408
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 222 VWTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYRLFLKKV 276
W+ LH RF+ A+ +G + A PK+I E M V GLT + V SHLQKYRL +++
Sbjct: 267 CWSPELHRRFVSALQQLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRM 322
>29827.m002675 transcription factor, putative
Length = 260
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 223 WTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYRL 271
WT LH+RF+ A+ +G +KA PK +L MG+ GLT ++ SHLQKYRL
Sbjct: 30 WTPDLHHRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRL 79
>29805.m001543 transcription factor, putative
Length = 313
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 223 WTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYRL 271
WT LHNRF+ AI+ +G KA PK I+ M V GLT ++ SHLQKYRL
Sbjct: 49 WTADLHNRFVDAISQLGGPNKATPKAIMRTMNVKGLTLFHLKSHLQKYRL 98
>29729.m002374 two-component system sensor histidine kinase/response
regulator, putative
Length = 155
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 24/139 (17%)
Query: 22 HILIVDDDSTTLAIVSSMLKLCTLQDRMIELSIVTIKNPLLALE--KLQDKD-------- 71
H+L VDD+ +V +LK + + T +N L ALE L D D
Sbjct: 23 HVLAVDDNLIDRKLVEKLLKNSCCK-------VTTAENGLRALEYLGLGDDDRNCLENNV 75
Query: 72 GAFDLVITDLHMPEMNGLELQKQVKEKF---KIPVILMSVDDKGSVISESLESGALLYIV 128
+L+ITD MP M G EL K++KE ++PV+++S ++ + I++ LE GA ++++
Sbjct: 76 SKVNLIITDYCMPGMTGYELLKKIKESSIMKEVPVVIVSSENIPTRINKCLEEGAQMFML 135
Query: 129 KPVNQGDLK----NVIDCA 143
KP+ D+K ++++C+
Sbjct: 136 KPLKLSDVKKLRCDIMNCS 154
>30017.m000317 transcription factor, putative
Length = 346
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 223 WTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYRL 271
WT LH RF+ A+ +G +KA PK I+ MGV GLT ++ SHLQK+RL
Sbjct: 28 WTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 77
>29680.m001711 DNA binding protein, putative
Length = 459
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 223 WTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYR 270
WT LH F++A+N +G E+A PK +L+ M V GLT +V SHLQKYR
Sbjct: 238 WTPELHEAFVEAVNKLGGSERATPKGVLKLMNVEGLTIYHVKSHLQKYR 286
>29807.m000474 conserved hypothetical protein
Length = 474
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 222 VWTNSLHNRFLQAINHIGLEK-AVPKRILEFMGVPGLTRENVASHLQKYRLFLKKVA 277
W+ LH RF+ A+ +G + A PK+I E M V GLT + V SHLQKYRL ++ +
Sbjct: 255 CWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPS 311
>30169.m006598 transcription factor, putative
Length = 536
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 223 WTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYRL--FLKKVAER 279
WT LH F++AI +G EKA PK +L+ M V GLT +V SHLQKYR+ +L E
Sbjct: 320 WTPELHESFVEAIIKLGGAEKATPKGVLKLMNVEGLTIYHVKSHLQKYRIAKYLPDKKEE 379
Query: 280 GLWSSQLSEKAFRSSFAS 297
S +KA SS S
Sbjct: 380 KKASCSEEKKAASSSTES 397
>29637.m000753 transcription factor, putative
Length = 491
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 223 WTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYR 270
WT LH F+ A+N +G E+A PK +L+ M V GLT +V SHLQKYR
Sbjct: 269 WTPELHEAFVDAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYR 317
>28582.m000316 transcription factor, putative
Length = 424
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 221 VVWTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYRL 271
+ WT LH +F++ +N +G +KA PK IL+ M GLT +V SHLQKYR+
Sbjct: 252 IRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSDGLTIFHVKSHLQKYRI 303
>29910.m000941 receptor histidine kinase, putative
Length = 185
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 20/132 (15%)
Query: 21 LHILIVDDDSTTLAIVSSMLKLCTLQDRMIELSIVTIKNPLLALEKL---QDK------- 70
+H+L VDD IV +LK + + + ++ N A+E L QDK
Sbjct: 19 IHVLAVDDCFLDRKIVEKLLKNASFK-------VTSVDNGKKAMEILGLSQDKVDKSTYN 71
Query: 71 DGAFDLVITDLHMPEMNGLELQKQVKEKFK---IPVILMSVDDKGSVISESLESGALLYI 127
D D+++TD MPEMNG +L VK IPV+++S + IS L +GA ++
Sbjct: 72 DQKIDIILTDYCMPEMNGYDLLMAVKGHSNVKSIPVVIISSEYDPQRISRCLANGAEDFL 131
Query: 128 VKPVNQGDLKNV 139
KP+ Q DL+ +
Sbjct: 132 QKPLQQKDLQKL 143
>27973.m000086 DNA binding protein, putative
Length = 356
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 223 WTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYR 270
WT+SLH RF+ A+ +G E+A PK +LE M V LT +V SHLQ YR
Sbjct: 243 WTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR 291
>29790.m000831 DNA binding protein, putative
Length = 309
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 223 WTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYRL 271
WT LH RF+ ++ +G E A PK+I E M V GLT + V SHLQKYRL
Sbjct: 205 WTPELHARFVVVLHMLGGPEVATPKQIKEAMKVEGLTNDQVKSHLQKYRL 254
>27914.m000409 transcription factor, putative
Length = 441
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 223 WTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYR 270
WT++LH RF+ A+ +G E+A PK +LE M V LT +V SHLQ YR
Sbjct: 307 WTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR 355
>30131.m007200 Two-component response regulator ARR8, putative
Length = 197
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 70 KDGAFDLVITDLHMPEMNGLELQKQVKEK--FK-IPVILMSVDDKGSVISESLESGALLY 126
+D +L+ITD MP M G +L +++KE FK IPV++MS ++ S I+ LE GA +
Sbjct: 79 QDLQVNLIITDYCMPGMTGYDLLRKIKESKSFKDIPVVIMSSENVPSRINRCLEEGAEEF 138
Query: 127 IVKPVNQGDLKNVIDCAVAAKKGKSIATEEMTNFEEGNSSSSNDEKDYLN 176
+KPV D+ + + K ++ + EE +S + Y N
Sbjct: 139 FLKPVQLSDVNKLKPHMMKGKTRENEPNNKRKGMEEIHSPERTRTRYYAN 188
>30068.m002645 transcription factor, putative
Length = 340
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 223 WTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYRLFLKKVAERGL 281
WT +LH RF+ A+ +G E+A PK +LE M V LT +V SHLQ YR K +R
Sbjct: 205 WTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTV--KTTDRAA 262
Query: 282 WSSQLSE 288
SS S+
Sbjct: 263 ASSGQSD 269
>28582.m000317 transcription factor, putative
Length = 316
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 223 WTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYR 270
W LH +F+ +N++G EKA P+ IL+ M GLT V SHLQKYR
Sbjct: 186 WNQELHEKFINCVNNLGGAEKATPRTILKMMESKGLTIFQVKSHLQKYR 234
>29780.m001368 conserved hypothetical protein
Length = 298
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 223 WTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYR 270
WT LH+ F+ AI +G +KA PK +L+ M V GLT +V SHLQ YR
Sbjct: 23 WTPELHHCFVHAIERLGGQDKATPKLVLQLMDVKGLTISHVKSHLQMYR 71
>28094.m000169 two-component system sensor histidine kinase/response
regulator, putative
Length = 221
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 28/138 (20%)
Query: 20 RLHILIVDDDSTTLAIVSSMLKLCTLQDRMIELSIVTIKNPLLALEKL------------ 67
+ H+L VDD ++ +LK+ + Q + T+ + AL+ L
Sbjct: 8 KFHVLAVDDSLIDRKLIEKLLKISSYQ-------VTTVDSGSKALQFLGLHEDDRSSPEI 60
Query: 68 ------QDKDGAFDLVITDLHMPEMNGLELQKQVKEKF---KIPVILMSVDDKGSVISES 118
++ +L+ITD MP M G +L K++KE IPV++MS ++ + I+
Sbjct: 61 PSVSPNSHQEVEVNLIITDYCMPGMTGYDLLKKIKESSSLKNIPVVIMSSENVPARITRC 120
Query: 119 LESGALLYIVKPVNQGDL 136
LE GA + +KPV DL
Sbjct: 121 LEEGAEEFFLKPVQLSDL 138
>28582.m000318 conserved hypothetical protein
Length = 534
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 223 WTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYR 270
W+ LH +F+ ++++G EKA PK IL+ M GLT +V SHLQKYR
Sbjct: 176 WSRELHEKFINCVDNLGGAEKATPKTILKMMESKGLTIFHVKSHLQKYR 224
>29842.m003572 DNA binding protein, putative
Length = 309
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 223 WTNSLHNRFLQAINHIGLE-KAVPKRILEFMGVPGLTRENVASHLQKYR 270
WT LH F+ A+ +G E +A PK +L+ M V GLT +V SHLQ YR
Sbjct: 71 WTPDLHQCFVHAVERLGGEDRATPKMVLQIMNVKGLTISHVKSHLQMYR 119
>30170.m013948 hypothetical protein
Length = 347
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 223 WTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYR 270
WT +LH F+ A+ +G E+A PK +LE M V LT +V SHLQ YR
Sbjct: 146 WTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYR 194
>29814.m000747 DNA binding protein, putative
Length = 375
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 223 WTNSLHNRFLQAINHIG-LEKAVPKRILEFMGVPGLTRENVASHLQKYRLFLKKVAERGL 281
WT LH F+ A+ +G E+A PK +L+ M + GL+ +V SHLQ YR KK+ +
Sbjct: 78 WTPDLHLCFVHAVERLGGEERATPKLVLQMMNIKGLSIAHVKSHLQMYR--SKKIDDATR 135
Query: 282 WSSQLSEKAFRSSFASG 298
+SE R+ F G
Sbjct: 136 EQGLISEGGDRNIFNLG 152