Jatropha Genome Database

JcCB0104661.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0104661.10 + phase: 0 
         (146 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30005.m001304 actin depolymerizing factor, putative                   273   2e-74
29895.m000310 actin depolymerizing factor, putative                   216   4e-57
29154.m000209 actin depolymerizing factor, putative                   193   3e-50
29585.m000599 actin depolymerizing factor, putative                   188   9e-49
30190.m011193 actin depolymerizing factor, putative                   182   4e-47
30147.m013737 actin depolymerizing factor, putative                   180   2e-46
30174.m009006 actin depolymerizing factor, putative                   177   1e-45

>30005.m001304 actin depolymerizing factor, putative
          Length = 146

 Score =  273 bits (698), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 129/146 (88%), Positives = 135/146 (92%)

Query: 1   MSFRGLSRPNATSGMGVADHSINTFLELQRKKVHRYVVFRIDXXXXXXXXXXTGGPAESY 60
           MSFRG+SRPNATSGMGVADHSINTFLELQRKKVHRYVVF+ID          TGGPAESY
Sbjct: 1   MSFRGISRPNATSGMGVADHSINTFLELQRKKVHRYVVFKIDEKKKEVVVEKTGGPAESY 60

Query: 61  EDFAASLPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRE 120
           EDFAASLP+NDCRYAVYDFDFVTSENCQKSKIFF AWSPSTSRIRAKMLYATSKDRFRR+
Sbjct: 61  EDFAASLPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSRIRAKMLYATSKDRFRRQ 120

Query: 121 LDGIHYEIQATDPTEMDLEVIRERAN 146
           LDGIHYEIQATDPTEMDLEV+R+RAN
Sbjct: 121 LDGIHYEIQATDPTEMDLEVLRDRAN 146


>29895.m000310 actin depolymerizing factor, putative
          Length = 140

 Score =  216 bits (549), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 100/132 (75%), Positives = 112/132 (84%)

Query: 14  GMGVADHSINTFLELQRKKVHRYVVFRIDXXXXXXXXXXTGGPAESYEDFAASLPENDCR 73
           G+ V DHS +TF+ELQRKKVHRYV+F+ID          TGG AESY DF+ASLPENDCR
Sbjct: 8   GLSVGDHSKSTFVELQRKKVHRYVIFKIDDKRNEVVVEKTGGTAESYGDFSASLPENDCR 67

Query: 74  YAVYDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDP 133
           YAVYDFDFVTS+NCQKSKIFFIAWSPS S +RAKMLYATSK R RR L+G+HYEIQATDP
Sbjct: 68  YAVYDFDFVTSDNCQKSKIFFIAWSPSGSHVRAKMLYATSKARIRRALEGVHYEIQATDP 127

Query: 134 TEMDLEVIRERA 145
           TEMDLEV+R+RA
Sbjct: 128 TEMDLEVLRDRA 139


>29154.m000209 actin depolymerizing factor, putative
          Length = 139

 Score =  193 bits (490), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 88/137 (64%), Positives = 107/137 (78%)

Query: 10  NATSGMGVADHSINTFLELQRKKVHRYVVFRIDXXXXXXXXXXTGGPAESYEDFAASLPE 69
           NA SGM V D     FLEL+ K+ +R++VF+I+           G PA+SYEDF ASLP 
Sbjct: 3   NAASGMAVHDDCKLRFLELKAKRTYRFIVFKIEEKQKQVIVEKVGEPAQSYEDFTASLPA 62

Query: 70  NDCRYAVYDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQ 129
           ++CRYAVYDFDFVT+ENCQKS+IFFIAWSP TSR+R+KM+YA+SKDRF+RELDGI  E+Q
Sbjct: 63  DECRYAVYDFDFVTAENCQKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQIELQ 122

Query: 130 ATDPTEMDLEVIRERAN 146
           ATDPTEM L+V R RAN
Sbjct: 123 ATDPTEMGLDVFRSRAN 139


>29585.m000599 actin depolymerizing factor, putative
          Length = 139

 Score =  188 bits (477), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 85/137 (62%), Positives = 105/137 (76%)

Query: 10  NATSGMGVADHSINTFLELQRKKVHRYVVFRIDXXXXXXXXXXTGGPAESYEDFAASLPE 69
           NA SGM V D     FLEL+ K+ HR++VF+I+           G P +SYEDFAASLP 
Sbjct: 3   NAASGMAVHDDCKLKFLELKAKRSHRFIVFKIEMVQKQVVVEKLGQPTDSYEDFAASLPA 62

Query: 70  NDCRYAVYDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQ 129
           ++CRYAVYDFD+VT ENCQKS+I FIAWSP T+++R KM+YA+SKDRF+RELDGI  E+Q
Sbjct: 63  DECRYAVYDFDYVTDENCQKSRIVFIAWSPDTAKVRNKMIYASSKDRFKRELDGIQVELQ 122

Query: 130 ATDPTEMDLEVIRERAN 146
           ATDPTEM L+VIR R+N
Sbjct: 123 ATDPTEMGLDVIRSRSN 139


>30190.m011193 actin depolymerizing factor, putative
          Length = 139

 Score =  182 bits (463), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 80/136 (58%), Positives = 103/136 (75%)

Query: 10  NATSGMGVADHSINTFLELQRKKVHRYVVFRIDXXXXXXXXXXTGGPAESYEDFAASLPE 69
           N++SGM V D     FLEL+ K+ +R++VF+I+           G P ESYEDF ASLP 
Sbjct: 3   NSSSGMAVNDECKLKFLELKAKRSYRFIVFKIEEKIQQVTVEKLGQPQESYEDFTASLPA 62

Query: 70  NDCRYAVYDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQ 129
           N+CRYAVYD DF T+EN QKSKIFF+AWSP TS++R+KMLYA+SKDRFRRELDG+  E+Q
Sbjct: 63  NECRYAVYDLDFTTNENVQKSKIFFVAWSPDTSKVRSKMLYASSKDRFRRELDGVQVELQ 122

Query: 130 ATDPTEMDLEVIRERA 145
           ATDP+EM  ++++ RA
Sbjct: 123 ATDPSEMSFDIVKARA 138


>30147.m013737 actin depolymerizing factor, putative
          Length = 498

 Score =  180 bits (457), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 82/136 (60%), Positives = 105/136 (77%), Gaps = 2/136 (1%)

Query: 10  NATSGMGVADHSINTFLELQRKKVHRYVVFRIDXXXXXXXXXXTGGPAESYEDFAASLPE 69
           N+ SGM V D     FLEL+ K+ HR+++F+I+           G P E+Y+DFAASLP 
Sbjct: 364 NSASGMAVQDDCKLKFLELKTKRNHRFIIFKIEGQQVVVEK--LGSPEETYDDFAASLPA 421

Query: 70  NDCRYAVYDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQ 129
           ++CRYAVYDFDF T+ENCQKSKIFFIAWSP TSR+R KM+YA+SKDRF+RELDGI  E+Q
Sbjct: 422 DECRYAVYDFDFTTNENCQKSKIFFIAWSPDTSRVRMKMVYASSKDRFKRELDGIQVELQ 481

Query: 130 ATDPTEMDLEVIRERA 145
           ATDP+EM +++I+ RA
Sbjct: 482 ATDPSEMSMDIIKGRA 497


>30174.m009006 actin depolymerizing factor, putative
          Length = 131

 Score =  177 bits (449), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 81/131 (61%), Positives = 101/131 (77%), Gaps = 1/131 (0%)

Query: 15  MGVADHSINTFLELQRKKVHRYVVFRIDXXXXXXXXXXTGGPAESYEDFAASLPENDCRY 74
           M V D     F EL +K+ HR++VF+ID           GGP E+Y+DFA SLP N+CRY
Sbjct: 1   MAVNDECKLKFQEL-KKRNHRFIVFKIDEKIQQVSVEKLGGPHETYDDFANSLPPNECRY 59

Query: 75  AVYDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPT 134
           AVYDFDF T+ENCQKSKIFFIAWSP TSR+R+KM+YA+SKDRF+RELDGI  E+QATDP+
Sbjct: 60  AVYDFDFTTNENCQKSKIFFIAWSPDTSRVRSKMVYASSKDRFKRELDGIQLELQATDPS 119

Query: 135 EMDLEVIRERA 145
           EM L++++ RA
Sbjct: 120 EMSLDIVKGRA 130