Jatropha Genome Database

JcCB0103991.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0103991.10 - phase: 0 
         (369 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29830.m001399 conserved hypothetical protein                          101   6e-22
29830.m001401 conserved hypothetical protein                           97   1e-20
29830.m001398 sugar binding protein, putative                          91   1e-18
29683.m000480 conserved hypothetical protein                           75   4e-14
30170.m014300 conserved hypothetical protein                           72   3e-13
30170.m014306 ubiquitin-protein ligase, putative                       72   4e-13
30170.m014296 conserved hypothetical protein                           72   6e-13
30170.m014297 conserved hypothetical protein                           69   4e-12

>29830.m001399 conserved hypothetical protein
          Length = 395

 Score =  101 bits (251), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 168/385 (43%), Gaps = 82/385 (21%)

Query: 28  SELPQEILAQIAESLDNYLDYFRFGAVCKSFRSSVHGFNFQYNSDYRSLKLPLIYFREES 87
           ++LP+E+L  I +  D+ +D  RF +VC S   S    +F        +KLP       +
Sbjct: 15  ADLPKELLETIGKCFDSRVDIVRFRSVCSS-WRSSASCSFDQEIPNLPIKLPQPINFNAN 73

Query: 88  LPGYTTIDLKTFYLLRHSPSS----------------ESCLVKVSGVSSGQ----EPPSS 127
           L  Y +   K  ++    P                     LVKV     G+     P S 
Sbjct: 74  L--YQSTICKMEFITHQKPEPSSDSSSSSSSSSNSESRGWLVKVGESKYGKLELLHPLSD 131

Query: 128 AIVRYLKTRPLELNLIDFSVSELHKHYF---ATMYELTGDDEFYSEDTVSKIVVIGRKDE 184
             +RY    P  LNL+D +   L K +     + Y + G         V+K+V+   KDE
Sbjct: 132 YKIRY---SPFVLNLLDTNFVNLSKAFMLKTQSGYPIYG---------VNKVVLFS-KDE 178

Query: 185 LAAMAIYGLEVELAWIRLGDERWTAM--NEQDYDDIINYKGQFYAVQGGSGKLIKIDVSS 242
            A +AI   E +L + + GDE+WT +  N  +YDDII YKGQFY V    G +  ID   
Sbjct: 179 SAIIAICH-EGKLTYWKDGDEQWTLLDNNHFEYDDIIEYKGQFYVVDRW-GTVSWID--- 233

Query: 243 SKAMKVV--VPNLLNGSCGCSSEKNLVESGGELLLLDRDMKGNK---------------- 284
            K+++V+   P L     GC   KNLVES G+L ++DR + G +                
Sbjct: 234 -KSLRVIQYSPPLF----GCGGRKNLVESCGDLYIVDRYLDGERRTWDDYDRESAAARRR 288

Query: 285 -----------LRVYKANEEEGKWVEIKSLGDRTVVVKEWRWAFSVCARDLGGSCKSNCV 333
                       RV+K +EE G W+++ SLGDR  V+     +FS+ + +  G  K NC+
Sbjct: 289 RYRKCSPRATDFRVHKLDEEWGTWIDVNSLGDRVFVLGI-DCSFSISSGEFVGG-KGNCI 346

Query: 334 LYVEKDGFEMFNLDDGSYSVLHSTD 358
            + + D +    L + S  +    D
Sbjct: 347 YFTDDDDYVGKGLSNDSIRIFRLED 371


>29830.m001401 conserved hypothetical protein
          Length = 410

 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 172/372 (46%), Gaps = 69/372 (18%)

Query: 23  SGSCLSELPQEILAQIAESLDNYLDYFRFGAVCKSFRSSVHGFNFQYNSDYRSLKLPLI- 81
           +G   ++LPQE+L  I++ LD+ +D +RF AVC S+RSSV     ++ S    L  P++ 
Sbjct: 6   AGREWADLPQELLEIISKHLDSRIDVYRFRAVCTSWRSSVSSSYRKFPSILLKLPPPILA 65

Query: 82  --YFREESLPGYTTIDLKTFYLLRHSPSSESCLVKVSGVSSGQE----PPSSAIVRYLKT 135
             +F   ++     +D       +      S L KV   + G+     P S+   R +K 
Sbjct: 66  DAFFSLVTICRLQLVDDDDDSDGKRLSRPNSWLTKVEESTRGEMQLLIPLSN---RQIKP 122

Query: 136 RP----LELNLIDFSVSELHKH---YFATMYELTGDDEFYSEDTVSKIVVIGRKDELAAM 188
            P      LNL++F + EL K      AT   + G D+       +++  I   D    +
Sbjct: 123 SPGMMTKMLNLLNFRLVELTKSCTFKLATGRPVLGIDKAVPFPNRARMNDINASD-FGVL 181

Query: 189 AIYGLEVELAWIRLGDERWTAMNEQD--YDDIINYKGQFYAVQGGSGKLIKIDVSSSKAM 246
           AI+  E +L + + GD  WT +++++  YDDII YK + Y V   +G +  ID  SS  +
Sbjct: 182 AIFH-EGKLGYWKNGDRNWTLLDDRNFHYDDIIFYKEKNYVVD-RNGTVSWID--SSLNL 237

Query: 247 KVVVPNLLNGSCGCSSEKNLVESGGELLLLDRDMKGNK---------------------- 284
               P L    CGC  +KNLVES G+L ++DR + G +                      
Sbjct: 238 IQYSPPL----CGCGDKKNLVESCGDLYVVDRYLDGERRIWQGHEGEHIINQERFNTDEL 293

Query: 285 -----------------LRVYKANEEEGKWVEIKSLGDRTVVVKEWRWAFSVCARDLGGS 327
                             +VYK +EE G+WV++KSL DR  VV     +FSV A++  G 
Sbjct: 294 FFNLLRNYPRCGAKTVDFKVYKLDEEWGRWVDVKSLDDRIFVVSN-EVSFSVSAKEFNG- 351

Query: 328 CKSNCVLYVEKD 339
            + NC+ Y + +
Sbjct: 352 WEGNCIYYTDPN 363


>29830.m001398 sugar binding protein, putative
          Length = 387

 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 160/372 (43%), Gaps = 64/372 (17%)

Query: 28  SELPQEILAQIAESLDNYLDYFRFGAVCKSFRSSVHGFNFQYNSDYRSLKLPLIYFREES 87
           ++LP+E++  I+E LD+ +D  +  AVC S+RSSV   +F      + L LP  +  +  
Sbjct: 9   ADLPKELVEMISEHLDSLIDILQLRAVCTSWRSSVSLPSFDQEIPLQILSLPFPFCVDVV 68

Query: 88  LPGYTTIDLKTFYLLRHSPSSESCLVKVSGVSSGQ---------EPPSSAIVRYLKTRPL 138
           L       L+   ++ H+ +  S + K   +  G+         +P S   V Y     +
Sbjct: 69  LSRRLIYRLE---VINHNINCSSSVSKGWLIKVGESRREKLKLLQPISDFQVGYCS---I 122

Query: 139 ELNLIDFSVSELHKHYFATMYELTGDDEFYSEDTVSKIVVIGRKDELAAMAIYGLEVELA 198
            L+L+D    EL + +   +    G   F     +   +     +E+  +       +L 
Sbjct: 123 PLDLLDLRFVELIQSFKLELANPEGFSVFGVYKVIPFSLPESSSEEVDGIIAIIQGGKLG 182

Query: 199 WIRLGDERWTAMNEQD--YDDIINYKGQFYAVQGGSGKLIKIDVSSSKAMKVVVPNLLNG 256
           +  +GDE W  +++ D  +DDII YKGQ Y V    G +  ID  SS  +    P LLN 
Sbjct: 183 YWLVGDEYWEFLDDGDFRFDDIIEYKGQLYVVD-RLGTVFWID--SSWELIRYSP-LLNS 238

Query: 257 SCGCSSEKNLVESGGELLLLDRDMKGNK-----------------------------LRV 287
             G    K LVES G+L ++DR + G +                             +RV
Sbjct: 239 RGG---RKTLVESCGDLYVVDRFLDGERNHEYETMATRYRNINPDRRTCERYPKTIDIRV 295

Query: 288 YKANEEEGKWVEIKSLGDRTVVVKEWRWAFSVCARDLGGSCKSNCVLYVEKD-------- 339
           YK +EE G+WV++KSLGD+  V+          +   GG  K NCV + + D        
Sbjct: 296 YKLDEEWGRWVDVKSLGDQVFVLGSDCSFSISSSELDGG--KGNCVYFTDDDEAGISSNN 353

Query: 340 -GFEMFNLDDGS 350
               MF L+D S
Sbjct: 354 VRIRMFQLEDCS 365


>29683.m000480 conserved hypothetical protein
          Length = 339

 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 142/338 (42%), Gaps = 88/338 (26%)

Query: 28  SELPQEILAQIAESLDNYLDYFRFGAVCKSFRSSVHGFNFQYNSDYRSLKLPLIYFREES 87
           + LP+++L QI++  D  +D  RF +VC S               +RS   P    +   
Sbjct: 5   TNLPKDLLEQISKCFDTSIDILRFRSVCSS---------------WRSSVSP----KRRR 45

Query: 88  LPGYTTIDLKTFYLLRHSPSSESCLVKVSGVSSGQEPPSSAIVRYLKTRPLELNLIDFSV 147
           L G       TF +L +            G+S       ++   YL  R + L      V
Sbjct: 46  LSG-------TFRILPND-----------GISC------TSFGFYLTRRTIFL----IGV 77

Query: 148 SELHKHYFATMYELTGDDEFYSEDTVSKIVVIGRKDELAAMAIYGLEVELAWIRLGDERW 207
              H     T  +       Y E  V   +    +++   + I+ +  +LA  + GD RW
Sbjct: 78  PNSHNQ---TDPDGCDAGNLYMEKVVMIWLNYENENDFVLLTIH-VSGKLAMFKSGDRRW 133

Query: 208 TAMNEQD--YDDIINYKGQFYAVQGGSGKLIKIDVSSSKAMKVVVPNLLNGSCGCSSEKN 265
           T + +    YDD+I YKG FYAV   +G+ + + +++   +   + N + G      +K 
Sbjct: 134 TIIQDMPSPYDDVIVYKGNFYAVD-NTGRTVIVRLNTELGL---IANPVFG----GDKKY 185

Query: 266 LVESGGELLLLDRDM-------------------------KGNKLRVYKANEEEGKWVEI 300
           LVES G+LLL+D  +                         +  + +V+K ++E   W+E+
Sbjct: 186 LVESLGDLLLVDMYLSIDTAEGGLSFGEEFLEHLAQYMSERTVRFKVFKLDKEAQTWIEV 245

Query: 301 KSLGDRTVVVKEWRWAFSVCARDLGGSCKSNCVLYVEK 338
           KSLGDR + + +    FS    DL G CK NC+ +V+ 
Sbjct: 246 KSLGDRVLFLGD-DSTFSASVSDLSG-CKGNCIFFVDN 281


>30170.m014300 conserved hypothetical protein
          Length = 402

 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 85/374 (22%), Positives = 152/374 (40%), Gaps = 47/374 (12%)

Query: 25  SCLSELPQEILAQIAESLDNYLDYFRFGAVCKSFRSSVHGFNFQYNSDYRSLKLPLIYFR 84
           S  +ELP E+L  IA+   NY+DY    AVC S++S++      +        L   Y  
Sbjct: 3   STWAELPPELLQVIADKHTNYVDYLVTRAVCGSWQSAIAKRPHNHLLCQLPFLLLPYYQN 62

Query: 85  EESLPGYTTIDLKTFYLLRHSPSSESCLVKVSGVSSG-----QEPPSSAIVRYLKTRPLE 139
                G+  I     Y+L    + E    +  G S G     ++ PS  ++  L    +E
Sbjct: 63  NPDRRGFYNISDDKIYVLELPEAYEK---RCCGSSHGWLIMVEDSPSIFLLNPLTRERIE 119

Query: 140 LNLID----FSVSELHKHYFATMYELTGDDEFYSEDTVSKIVVIGRKDEL----AAMAIY 191
           L  +     F    + ++           ++F+  DT     ++     L     A+ IY
Sbjct: 120 LPALSTFSIFPTDVVFENSRNLNENFIMREKFHIRDTFIVKAILSSDPSLDTNFMAVVIY 179

Query: 192 GLEVELAWIRLGDERWTAMNE-----QDYDDIINYKGQFYAVQGGSGKLIKIDVSSSKAM 246
           G+   LA+ R GD  WT ++E     + Y D +   G+ +AV    G  I I    +  +
Sbjct: 180 GVNENLAFCRSGDAAWTVIDETTSPPRRYKDALFRAGKLFAVDQTGG--ISILTEENTMI 237

Query: 247 KVVVPNLLNGSCG--------CSSEKNLVESGGELLLLDRDMKGNKLRVYKANEEEGKWV 298
           +   P L++   G         S E+ L+      ++ D + K  +  +YK   ++G W 
Sbjct: 238 RFADPPLVSSRTGYKQWYLASYSEEELLIVCRYRKVVPDYEYKTERFEIYKL--DDGGWK 295

Query: 299 EIKSLGDRTVVVKEWRWAFSVCARDLGGSCKSNCVLYV------------EKDGFEMFNL 346
           + +SLGD+ + +     + S+ A D    CK NC+ +             E   + ++++
Sbjct: 296 KKESLGDKMLFLGG-NGSLSISALDY-SKCKGNCIYFTDDYIRLCKDYVWEGHDYGIYDI 353

Query: 347 DDGSYSVLHSTDFP 360
           +DG+   L    +P
Sbjct: 354 EDGNIRSLGLPSYP 367


>30170.m014306 ubiquitin-protein ligase, putative
          Length = 398

 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 153/356 (42%), Gaps = 62/356 (17%)

Query: 28  SELPQEILAQIAESLDNYLDYFRFGAVCKSFRSSVHGFNFQYNSDYRSLKLPLIYFREES 87
           S+LP E++  I++ L  Y DY    AVC ++R S+             L LP    +   
Sbjct: 6   SQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHLPPQLPWLMLPQSQSQSNQ 65

Query: 88  L-PGYTTIDLKTFYLL---------RHSPSSESCLVKVSGVSSGQEPPSSAIVRYLKTRP 137
               + ++    F+ L         RH  SS   L+ +       + P+  ++  L    
Sbjct: 66  SRRAFFSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMIL------DDTPTILLINPLTRAK 119

Query: 138 LEL-------NLIDFSVSELHKHYFATMYELTGDDEFYS----EDTVSKIVVIG----RK 182
           L L       N+I F+ S++ + Y   +  L G+    S     D+  + VV+     + 
Sbjct: 120 LSLPPLSSFPNVISFNYSDIGREY--ALRNLLGERVTVSLRQMRDSFIRKVVLSSSPLKD 177

Query: 183 DELAAMAIYGLEVELAWIRLGDERWTAM-NEQDY-DDIINYKGQFYAVQGGSGKLIKIDV 240
           +    +AI     +LA+ R GD+ W+ + N + + +D+I   G FYAV   +G+++  D+
Sbjct: 178 NNFVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVN-KAGQIVICDI 236

Query: 241 S--SSKAMKVVVPNLLNGSCGCSSEKNLVESGGELLLLDR-----------DMKGN---- 283
           S  S +   +  P    G       + LV SG ELLL+ R           DM+ +    
Sbjct: 237 SSDSPRVSFMETPRQAGGDM-----QYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYR 291

Query: 284 --KLRVYKANEEEGKWVEIKSLGDRTVVVKEWRWAFSVCARDLGGSCKSNCVLYVE 337
             +  V++ +    +W+ + +LGD+ + + E   + S+ A D  G C  NC+ Y +
Sbjct: 292 TIRFEVFRLDWNGPQWLRMSTLGDKALFIGE-NSSLSLSATDFSG-CMGNCIYYTD 345


>30170.m014296 conserved hypothetical protein
          Length = 406

 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 146/376 (38%), Gaps = 46/376 (12%)

Query: 25  SCLSELPQEILAQIAESLDNYLDYFRFGAVCKSFRSSVHGFNFQYNSDYRSLKLPLIYFR 84
           S  SELPQE+L  I +   NY+DY    AVCKS+ S++             L LP     
Sbjct: 2   SNWSELPQELLQTITQKQSNYVDYISTRAVCKSWWSAIPKKPHDLLCQLPWLLLPYHKNN 61

Query: 85  EESLPGYTTIDLKTFYL-------LRHSPSSESCLVKVSGVSSG--QEPPSSAIVRY--L 133
                 Y   D KT++L        R   SS   LV V    S     P + A +    L
Sbjct: 62  PNHRGFYNLADGKTYHLELPETIEKRCCGSSHGWLVMVEDTPSIFLLNPLTKARIELPSL 121

Query: 134 KTRPLELNLIDFSVSELHKHYFATMYELTGDDEFYSEDTVSKIVVIGRKDELAAMAIYGL 193
            T P     + +  S     YF T  +L   + +  +  VS+    G     A MAIY  
Sbjct: 122 STFPYFPTEVVYENSRNINEYFNTKAKLRIRETYIRKAIVSEDPSTG---NFAVMAIYKT 178

Query: 194 ---EVELAWIRLGDERWTAMNEQD----YDDIINYKGQFYAVQG-GSGKLIKIDVSSSKA 245
                 +A+ + GD  W  + E      Y D++ ++G+FYAV   G   +   D++    
Sbjct: 179 INSTENIAFCKSGDATWFTIQETSQKIHYQDVMFHRGKFYAVDDKGRVSICITDINPPSV 238

Query: 246 MKVVVPNLLNGSCGCSSEKNLVESGGELLLLDR---------DMKGNKLRVYKANEEEGK 296
           ++V  P  +    G   +  L     +L+L  R         + + +K  VYK +     
Sbjct: 239 IQVADPPPVPPLMG-YKQWYLASLDEDLILAGRFRKYRGSGYEYQTHKFMVYKLDASSSN 297

Query: 297 WVEIKSLGDRTVVVKEWRWAFSVCARDLGGSCKSNCVLYV------------EKDGFEMF 344
           W+E+  LGD    +  W    S+  ++   +   NC+ +             E   + +F
Sbjct: 298 WLELDGLGDMLSFLG-WNCFHSISTQNY-RNYSGNCIYFTDDKFIVGSDFPWEGHDYGIF 355

Query: 345 NLDDGSYSVLHSTDFP 360
           NLDD S   L    +P
Sbjct: 356 NLDDKSVQRLGLPSYP 371


>30170.m014297 conserved hypothetical protein
          Length = 406

 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 148/377 (39%), Gaps = 48/377 (12%)

Query: 25  SCLSELPQEILAQIAESLDNYLDYFRFGAVCKSFRSSVHGFNFQYNSDYRSLKLPLIYFR 84
           S  SELPQE+L  I +   NY+DY    AVCKS+ S++             L LP     
Sbjct: 2   SSWSELPQELLQTITQKQTNYVDYISTRAVCKSWWSAIPKKPHDLLCRLPWLLLPHHKDN 61

Query: 85  EESLPGYTTIDLKTFYL-LRHSPSSESCLVKVSGVSSGQEPPSSAIVRYLKTRPLEL--- 140
                 Y   D KT++L L  +     C      +   ++ PS  ++  L    +EL   
Sbjct: 62  PNHRGFYNPSDGKTYHLELPETVDKRCCGSSHGWLVMVEDTPSIFLLNPLTKSRIELPSL 121

Query: 141 -NLIDFSVSELHKH------YFATMYELTGDDEFYSEDTVSKIVVIGRKDELAAMAIY-- 191
               +F    ++++      YF    +L   + +  +  VS+   +G       MAIY  
Sbjct: 122 STFPNFPTEVIYQNSRNLNEYFIRNNKLRIRETYIRKAIVSEDPSVG---SFMVMAIYKT 178

Query: 192 --GLEVELAWIRLGDERWTAMNEQD----YDDIINYKGQFYAVQG-GSGKLIKIDVSSSK 244
             G E  +A+ + GD       E      Y D++ ++G+FY V   G   +   D++   
Sbjct: 179 INGSE-NIAFCKSGDAALFTTQETSQEIHYQDVMFHRGKFYMVNDKGRVSICITDINPPS 237

Query: 245 AMKVVVPNLLNGSCGCSSEKNLVESGGELLLLDR---------DMKGNKLRVYKANEEEG 295
            + V  P  +    G   +  L     +L+L+ R         + + +K  VYK +    
Sbjct: 238 VIHVADPPPVPLLMG-YKQWYLATLNEDLILVGRFRNYRVSGYEYQTHKFIVYKLDSSSS 296

Query: 296 KWVEIKSLGDRTVVVKEWRWAFSVCARDLGGSCKSNCVLYV------------EKDGFEM 343
            W ++  LGD  +    W    S+ A +  G+C  NC+ +             E   + +
Sbjct: 297 NWSKLDGLGD-MIFFLGWNCFDSISAHNC-GNCSGNCIYFTDDNFIVDSDFSWEGHDYGV 354

Query: 344 FNLDDGSYSVLHSTDFP 360
           FN DDGS   L    +P
Sbjct: 355 FNFDDGSVRRLDPPSYP 371