Jatropha Genome Database

JcCB0103411.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0103411.10 + phase: 0 /partial
         (323 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m006861 serine palmitoyltransferase, putative                   644   0.0  
29983.m003305 serine palmitoyltransferase I, putative                 120   1e-27
30147.m013982 8-amino-7-oxononanoate synthase, putative                84   6e-17

>30131.m006861 serine palmitoyltransferase, putative
          Length = 488

 Score =  644 bits (1662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/323 (94%), Positives = 315/323 (97%)

Query: 1   MIAIPYLTALTTYFSYGLLFAFGQIRDFFRKIIDWWSSNNLQGYAPICLGLEDFYIRRLY 60
           MIAIPYLTALTTYFSYGLLFAFGQIRDFFRKI DW  SNNLQGYAPICLGLEDFYIRRLY
Sbjct: 1   MIAIPYLTALTTYFSYGLLFAFGQIRDFFRKIFDWCKSNNLQGYAPICLGLEDFYIRRLY 60

Query: 61  LRIQDCFGRPIASAPDAWFDVVERYSNDNNKTLIRTSNVKRCLNLGSYNYLGFAAADEYC 120
           LRIQDCFGRPIASAPDAWFDVVER+SNDNNKTL R++N+ RCLNLGSYNYLGFAAADEYC
Sbjct: 61  LRIQDCFGRPIASAPDAWFDVVERFSNDNNKTLKRSTNMSRCLNLGSYNYLGFAAADEYC 120

Query: 121 TPRVIESLKKYSPSTCSSRVDAGTTALHNELEKCVADFVGKPAAIVFGMGYVTNSAILPV 180
           TPRVIESLKKYSPSTCSSRV+ GTTALHNELEKCVADFVGK AAIVFGMGYVTNSAILPV
Sbjct: 121 TPRVIESLKKYSPSTCSSRVEGGTTALHNELEKCVADFVGKSAAIVFGMGYVTNSAILPV 180

Query: 181 LIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIADGQPRTHRPWK 240
           L+GKG LIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIADGQPRTHRPWK
Sbjct: 181 LMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIADGQPRTHRPWK 240

Query: 241 KIIVIVEGIYSMEGELCKLPEIIAICKKYKAYTYLDEAHSIGAVGKSGRGVCELLGVDTA 300
           KI+VIVEGIYSMEGELCKLPEIIAICKKYKA+TYLDEAHSIGAVGK+GRGVCELLGVDTA
Sbjct: 241 KIMVIVEGIYSMEGELCKLPEIIAICKKYKAFTYLDEAHSIGAVGKTGRGVCELLGVDTA 300

Query: 301 DVDIMMGTFTKSFGSCGGYIAGS 323
           DVDIMMGTFTKSFGSCGGYIAGS
Sbjct: 301 DVDIMMGTFTKSFGSCGGYIAGS 323


>29983.m003305 serine palmitoyltransferase I, putative
          Length = 482

 Score =  120 bits (300), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 116/229 (50%), Gaps = 10/229 (4%)

Query: 98  NVKRCLNLGSYNYLGFAAAD---EYCTPRVIESLKKYSPSTCSSRVDAGTTALHNELEKC 154
           N K  +N  S NYLG    D   E CT     +L+KY   +C  R   GT  +H + E  
Sbjct: 108 NSKEVVNFASANYLGLIGHDKLLESCT----SALEKYGVGSCGPRGFYGTIDVHLDCEAR 163

Query: 155 VADFVGKPAAIVFGMGYVTNSAILPVLIGKGGLIISDSLNHNSIVNGARGSGATIRVFQH 214
           +A F+G P +I++  G  T  + +P    KG +I+ D   H  I NG   S +TI  F+H
Sbjct: 164 IAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDIIVVDEGVHWGIQNGLYLSRSTIVYFKH 223

Query: 215 NTPSHLEEVLREQIADGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIIAICKKYKAYTY 274
           N    L+  L E+I   + R  +  + I+V  E +Y   G++  L EII + +KY+    
Sbjct: 224 NDMESLQNTL-EKITAEKKRAKQLRRYIVV--EAVYQNSGQIAPLNEIIKLKEKYRFRVL 280

Query: 275 LDEAHSIGAVGKSGRGVCELLGVDTADVDIMMGTFTKSFGSCGGYIAGS 323
           LDE++S G +G+ GRG+ E  GV    +DI+      +  + GG+  GS
Sbjct: 281 LDESNSFGVLGRFGRGLTEYYGVPVEKIDIITAAMGHALATEGGFCTGS 329


>30147.m013982 8-amino-7-oxononanoate synthase, putative
          Length = 484

 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 40/261 (15%)

Query: 81  VVERYSNDNNKTLIRTSNVKRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSPSTCSSRV 140
           V+  Y   + K L+ + N    L L ++  +G AAA         ++ +++      S +
Sbjct: 75  VMGHYVEQSKKLLLFSGN--DYLGLSAHPTIGKAAA---------KAAQEHGMGPRGSAL 123

Query: 141 DAGTTALHNELEKCVADFVGKPAAIVFGMGYVTNSAILPVLIGKGGL------------- 187
             G T  H  LE  +A+   K   ++   G+  N A++  L     L             
Sbjct: 124 ICGYTNYHRLLESSLANLKKKEDCLLCPTGFAANMAVMVALGNISSLLASAEIPLKKEKI 183

Query: 188 -IISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHLEEVLREQIADGQPRTHRPWKKI 242
            I SD+LNH SI++G     R     + V++H   SHL  +L          ++   KK 
Sbjct: 184 AIFSDTLNHASIIDGIRLAERQQNVEVHVYKHCDMSHLSSLL----------SNCALKKK 233

Query: 243 IVIVEGIYSMEGELCKLPEIIAICKKYKAYTYLDEAHSIGAVGKSGRGVCELLGVDTADV 302
           +V+ + ++SM+G+   + E++ + K++     +D+AH     GK+G GV E    +  DV
Sbjct: 234 VVVTDSLFSMDGDFAPMAELVKLRKRHGFLLVIDDAHGTFICGKNGGGVAEEFNCEK-DV 292

Query: 303 DIMMGTFTKSFGSCGGYIAGS 323
           DI +GT +K+ G  GG+IA S
Sbjct: 293 DICVGTLSKAAGCHGGFIACS 313