Jatropha Genome Database

JcCB0103361.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0103361.10 - phase: 0 
         (468 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29841.m002910 arsenite transport protein, putative                    473   e-134
30169.m006237 arsenite transport protein, putative                    287   6e-78
30169.m006238 arsenite transport protein, putative                    187   1e-47
48478.m000013 Inner membrane protein ybiR, putative                    69   5e-12

>29841.m002910 arsenite transport protein, putative
          Length = 486

 Score =  473 bits (1217), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 262/510 (51%), Positives = 327/510 (64%), Gaps = 68/510 (13%)

Query: 1   MAATVKMIL-GSFAFAIFWVLAVFPAIPILPIGRTAGSLLAAVLMVIFQVITPTEAYSSI 59
           +A+++K++L GS AF  FWVLAVFPA P LP+GRTAGSLL A+LMVIFQV+TP EAY++I
Sbjct: 3   LASSLKVVLLGSVAFTFFWVLAVFPATPFLPVGRTAGSLLGAMLMVIFQVMTPDEAYAAI 62

Query: 60  DISILALLFGTMVVSVYLERADAFKYLGKLLSWKSLGAKDLIFRVCLVSAITSAFFTNDT 119
           D+ IL LLFGTMV+SVYLE+AD FKY+                       ++SA FTNDT
Sbjct: 63  DLPILGLLFGTMVISVYLEKADMFKYI-----------------------VSSALFTNDT 99

Query: 120 SCIVLTQMVLKIARQRNLPPHPFLLXXXXXXXXXXXXTPIGNPQNLIIALNGDISFWPFL 179
           SC+VLT+ VLK+ARQ NLPPHPFLL            TPIGNPQNL+IA+   ISF  F+
Sbjct: 100 SCVVLTEFVLKVARQHNLPPHPFLLALASSANIGSSTTPIGNPQNLVIAVQSRISFEKFV 159

Query: 180 GGIFPAAVVXXXXXXXXXXCMYWKQLSS-QKXXXXXXXXXXXXXXXXYHRL--------- 229
            G+ PA +V          CMYW+ LSS Q                  H+          
Sbjct: 160 LGLLPAMLVGIFVNIIIIMCMYWRLLSSTQIDEEEVIAEVIADENVNSHKFSPATMSHFG 219

Query: 230 --NCQEICLGLDMQSSPYVLENLAALSNGVLERSSAA----------------------- 264
             + QE    LD  S+      +A+   G ++RSS+A                       
Sbjct: 220 TSDSQEFNSSLDSLSTQSSSNTIAS---GDVKRSSSAKTETRSESARNTNASKEVKAGGS 276

Query: 265 ------SKWKALIWKSCVYLVTIGMLIALLMGVNISWTALTAALSLMVLDFKDAQPCLEK 318
                 +KW+ L+ KSCVYL+TIGML+ALL+G+N+SWTA+TAAL L+VLDFKDAQPC EK
Sbjct: 277 EKEDFSTKWRRLLRKSCVYLITIGMLVALLLGLNMSWTAITAALLLVVLDFKDAQPCFEK 336

Query: 319 VSYSLLVFFCGLFMTITGFEKTGIPSYLWEFLEPYAHIDHASGITVLAXXXXXXXXXXXX 378
           VSYSLL+FFCG+F+T+ GF KTG+PS +W+ +EP+A ID+ +GI VLA            
Sbjct: 337 VSYSLLIFFCGMFITVYGFNKTGVPSAIWDLMEPHAKIDNPAGIAVLAIVILVMSNLASN 396

Query: 379 VTTVLLLGGRVAASAASISPTYVKKAWLVLAWVSTASGNFTLVGSAANMIVCEQARNAPN 438
           V TVLLLGGRVAASAA+IS    KKAWL+LAWVST +GN +L+GSAAN+IVCEQAR AP 
Sbjct: 397 VPTVLLLGGRVAASAAAISAAEEKKAWLILAWVSTVAGNLSLLGSAANLIVCEQARRAPE 456

Query: 439 FGCNLSFFGHLKFGLPSTILVTAIGLTLIH 468
           FG NL+F+ HL FGLPST++VTA GL LI 
Sbjct: 457 FGYNLTFWKHLNFGLPSTLIVTAAGLLLIK 486


>30169.m006237 arsenite transport protein, putative
          Length = 564

 Score =  287 bits (735), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 150/259 (57%), Positives = 177/259 (68%), Gaps = 15/259 (5%)

Query: 1   MAATVKMILGSFAFAIFWVLAVFPAIPILPIGRTAGSLLAAVLMVIFQVITPTEAYSSID 60
           +A+T K++LGS AFAIFW+LAVFPA+P LP+GRTAGSLL A+LMVIFQV+TP +AY++ID
Sbjct: 3   LASTPKVVLGSIAFAIFWILAVFPAVPFLPVGRTAGSLLGAMLMVIFQVLTPDQAYAAID 62

Query: 61  ISILALLFGTMVVSVYLERADAFKYLGKLLSWKSLGAKDLIFRVCLVSAITSAFFTNDTS 120
           + IL LLFGTMVVSVYLERAD FKYLGKLLSWKS G KDL+ R+CL+SAI+SA FTNDTS
Sbjct: 63  LPILGLLFGTMVVSVYLERADMFKYLGKLLSWKSKGPKDLLCRICLISAISSALFTNDTS 122

Query: 121 CIVLTQMVLKIARQRNLPPHPFLLXXXXXXXXXXXXTPIGNPQNLIIALNGDISFWPFLG 180
           C+VLT+ VLKIARQ NLPPHPFLL            TPIGNPQNL+IA+   +SF  FL 
Sbjct: 123 CVVLTEFVLKIARQHNLPPHPFLLALASSANIGSSATPIGNPQNLVIAVQSKLSFGKFLF 182

Query: 181 GIFPAAVVXXXXXXXXXXCMYWKQLSS-QKXXXXXXXXXXXXXXXXYHR----------- 228
           G+ PA +V           MYW+ LSS QK                +HR           
Sbjct: 183 GVLPAMLVGIVVNITALMFMYWRLLSSTQKDEEDATSEVVADDDVSFHRFSPATMSHSAS 242

Query: 229 LNCQEICLGLD---MQSSP 244
           LN QE    L+   MQSSP
Sbjct: 243 LNSQEGNFRLESVNMQSSP 261



 Score =  281 bits (720), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 138/205 (67%), Positives = 173/205 (84%)

Query: 264 ASKWKALIWKSCVYLVTIGMLIALLMGVNISWTALTAALSLMVLDFKDAQPCLEKVSYSL 323
           ++KWK ++WKSCVYL+TI ML+ALLMG+N+SW+A+TAAL+L+VLDFKDA+PCLEKVSYSL
Sbjct: 360 STKWKRMLWKSCVYLITIAMLVALLMGLNMSWSAITAALALVVLDFKDARPCLEKVSYSL 419

Query: 324 LVFFCGLFMTITGFEKTGIPSYLWEFLEPYAHIDHASGITVLAXXXXXXXXXXXXVTTVL 383
           L+FFCG+F+T+ GF KTGIPS LW+F+EP+A ID+A+GI+VLA            V TVL
Sbjct: 420 LIFFCGMFITVDGFNKTGIPSALWDFMEPHAKIDNAAGISVLAGVILVLSNLASNVPTVL 479

Query: 384 LLGGRVAASAASISPTYVKKAWLVLAWVSTASGNFTLVGSAANMIVCEQARNAPNFGCNL 443
           LLGGR+AASAA+IS    KKAWLVLAWVST +GN +L+GSAAN+IVCEQAR AP  G NL
Sbjct: 480 LLGGRIAASAAAISAADEKKAWLVLAWVSTVAGNLSLLGSAANLIVCEQARRAPQLGYNL 539

Query: 444 SFFGHLKFGLPSTILVTAIGLTLIH 468
           +F+ HLKFG+PST++VTA+GL LI 
Sbjct: 540 TFWKHLKFGVPSTVIVTAVGLILIR 564


>30169.m006238 arsenite transport protein, putative
          Length = 315

 Score =  187 bits (474), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 97/190 (51%), Positives = 123/190 (64%), Gaps = 11/190 (5%)

Query: 278 LVTIGMLIALLMGVNISWTALTAALSLMVLDFKDAQPCLEKVSYSLLVFFCGLFMTITGF 337
           ++ IG+++ + +  NISWTA+TAAL+L+VLDFKDAQP LE+VSYSLLVFFCG+FMTI GF
Sbjct: 133 ILDIGVML-VRVNTNISWTAITAALALLVLDFKDAQPSLERVSYSLLVFFCGMFMTIDGF 191

Query: 338 EKTGIPSYLWEFLEPYAHIDHASGITVLAXXXXXXXXXXXXVTTVLLLGGRVAASAASIS 397
           EKTGIP+YLWE +EPYA I H SG+ +LA            V    +          ++S
Sbjct: 192 EKTGIPNYLWELMEPYAQIKHVSGVAILALIIIMLSNCVSNVNNCCI----AWEEHRNVS 247

Query: 398 PTYVKKAWLVLAWVSTASGNFTLVGSAANMIVCEQARNAPNFGCNLSFFGHLKFGLPSTI 457
             Y  +             + +LVGSAANM VCEQAR AP F  NLSF+ HLK G+PSTI
Sbjct: 248 CRYFTRI------CEEDMADISLVGSAANMTVCEQARRAPTFAHNLSFWSHLKIGVPSTI 301

Query: 458 LVTAIGLTLI 467
           +VT  G  +I
Sbjct: 302 IVTVAGPGMI 311



 Score =  122 bits (306), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 61/70 (87%), Positives = 65/70 (92%)

Query: 49  VITPTEAYSSIDISILALLFGTMVVSVYLERADAFKYLGKLLSWKSLGAKDLIFRVCLVS 108
           VI+P EAY+SIDISILALLFGTMVVSVYLERAD F+YL KLLSWKS GAKDLIFRVCLVS
Sbjct: 7   VISPDEAYASIDISILALLFGTMVVSVYLERADTFEYLVKLLSWKSQGAKDLIFRVCLVS 66

Query: 109 AITSAFFTND 118
           AITSA FTN+
Sbjct: 67  AITSALFTNE 76


>48478.m000013 Inner membrane protein ybiR, putative
          Length = 347

 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 1/125 (0%)

Query: 64  LALLFGTMVVSVYLERADAFKYLGKLLSWKSLGAKDLIFRVCLVSAITSAFFTNDTSCIV 123
           +ALLF  MVVS  +     + ++   L+  +LG   L+  + +VSA  SA F+ND  C+ 
Sbjct: 1   MALLFAFMVVSAQMRLGGFYDWVTHKLAGLALGPASLLGVLIVVSATLSAVFSNDIVCLA 60

Query: 124 LTQMVLKIARQRNLPPHPFLLXXXXXXXXXXXXTPIGNPQNLIIALNGDISFWP-FLGGI 182
           +  +++   R+R L P P+LL            T IGNPQN++I     +SF   FL  I
Sbjct: 61  MAPLLVDACRRRGLAPVPYLLALACAANIGSAATLIGNPQNMLIGQTMRLSFDGYFLDAI 120

Query: 183 FPAAV 187
            P A+
Sbjct: 121 LPVAL 125