Jatropha Genome Database

JcCB0101961.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0101961.10 - phase: 0 /partial
         (395 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29785.m000932 myb81, putative                                         453   e-128
29686.m000890 r2r3-myb transcription factor, putative                 321   3e-88
29823.m000215 r2r3-myb transcription factor, putative                  65   6e-11

>29785.m000932 myb81, putative
          Length = 478

 Score =  453 bits (1165), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 238/397 (59%), Positives = 279/397 (70%), Gaps = 35/397 (8%)

Query: 1   LPGRTDNEIKNYWNTRIKRLQRAGLPIYPPEVCLQVLNGSQESQDMGTLQSTDTHGSNLI 60
           LPGRTDNEIKNYWNTRIKRLQRAGLPIYPPEVCLQ+ NGS ESQ++GT Q+TDTH S+LI
Sbjct: 115 LPGRTDNEIKNYWNTRIKRLQRAGLPIYPPEVCLQLFNGSHESQNLGTPQTTDTHSSDLI 174

Query: 61  QNDHFEIPEVEFKNLELNRGLLSYSPTVLDISQSSMLKQGVSPSHSNNFMFPAMHPAKRL 120
           Q  H+EIPEV+F+N E +RGLLSY P +L+I  +SM KQGV PS S+ F+FP + PAKRL
Sbjct: 175 QTGHYEIPEVQFQNFEFSRGLLSYPPNILEIPMTSMPKQGVHPSDSDGFVFPTLTPAKRL 234

Query: 121 RESETIFPTLDCSVSSGLPVFIQSTDHFSEKIADSFGVSSRCVPHTNTYGQPSLGVLSGI 180
           RES++ FP LD   S GLP +IQ          + FG+SS    HTN YGQ  L V  G 
Sbjct: 235 RESDSEFPVLDGG-SDGLPAYIQ----------EPFGLSSSYDSHTNYYGQQLLAVPPGS 283

Query: 181 HALLNDNSSSSEPFCGLMKLELPSLQYSETQQDSWGMPASPLPSLESVDTLIQSPPTE-- 238
           HALLNDNSSSSEP CG MKLELPSLQYSETQQDSW  P SPLPSLESVDTLIQSPPTE  
Sbjct: 284 HALLNDNSSSSEPLCGAMKLELPSLQYSETQQDSWERPTSPLPSLESVDTLIQSPPTELT 343

Query: 239 QTDCLSPRSSGLLEAVLYESHTLKSSRNYSGHQTSDNSIVPGDVEDCSLNPCETEWDIHG 298
           Q+ C SPR +G LEA+LY S +LK+S+    HQ S +S+ P D+ DC  N  ETE + HG
Sbjct: 344 QSHCFSPRDNGTLEALLYGSQSLKNSKKTLDHQFSVSSVAPSDIGDCPSNTGETEKEAHG 403

Query: 299 DPNSPLGHSVASVFSACTPISGGSSDEPGYDLKPETANQVSTPYIEEKEVPNHIDFTRPD 358
           DPNSPL                      G DLKPE AN+V  P++EEKE  NHID+TRPD
Sbjct: 404 DPNSPL----------------------GIDLKPEIANEVLNPFLEEKEASNHIDYTRPD 441

Query: 359 ALLGSGWFGLTGVCIKDPPIRTDAVGASFGDDVDSEC 395
            LLGS WFG +G  +KD   + + V   F D+V+ +C
Sbjct: 442 LLLGSCWFGFSGGHVKDEYFQNEDVQVPFDDEVNIKC 478


>29686.m000890 r2r3-myb transcription factor, putative
          Length = 556

 Score =  321 bits (823), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 189/405 (46%), Positives = 252/405 (62%), Gaps = 16/405 (3%)

Query: 1   LPGRTDNEIKNYWNTRIKRLQRAGLPIYPPEVCLQVLNGSQESQDMGTLQSTDTHGSNLI 60
           LPGRTDNEIKNYWNTRIKR QRAGLP+YPPEV  Q L  S +   +G + + D    +L+
Sbjct: 122 LPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVSFQALQESHQGLTIGGINTGDKVHGDLL 181

Query: 61  QNDHFEIPEVEFKNLELNRGLLSYSPTVLDISQSSMLKQGVSPSHSNNFMFPAMHPAKRL 120
           +N+ +EIP+V F +L+ ++G+  Y P + DI+ SSML +G+S S   +FM P+ H  KRL
Sbjct: 182 RNNGYEIPDVIFDSLKASQGISPYVPELADITTSSMLIKGLSSSQYGSFMSPSAHRQKRL 241

Query: 121 RESETIFPTLDCSVSSGLPVFIQSTDHFSEKIADSFGVSSRCVPHTNTYGQPSLGVLSGI 180
           RES T  P    ++ S  P+F Q  D   +K+A SFG+S    P      Q S G   G 
Sbjct: 242 RESTTFIPGYSGNIKSEFPLFDQFQDESCDKVAQSFGLSFPFDPDPTKNPQ-SFGENQGS 300

Query: 181 HALLNDNSSSSEPFCGLMKLELPSLQYSETQQDSWGMPASPLPSLESVDTLIQSPPTEQT 240
           H L N + S+S+   G +KLELPSLQY ET   SWG   SP P LE++D  IQSPPT   
Sbjct: 301 HTLANGDFSTSKLTSGPVKLELPSLQYPETDLGSWG--TSPPPLLETLDNFIQSPPTAII 358

Query: 241 DCLSPRSSGLLEAVLYESHTLKSSRNY-SGHQTSDNSIVPGDVEDCS-LNPCETEWDIHG 298
           +  SPR+SGLL+A+LYE+  L S++N+ S   ++ +++ PG++ +CS +N CETEW+ +G
Sbjct: 359 ES-SPRNSGLLDALLYEAKALSSAKNHSSEKSSNSSTVTPGELAECSAINICETEWEDYG 417

Query: 299 DPNSPLGHSVASVFSACTPI--SGGSSDEP-------GYDLKPETANQVSTPYIEEKEVP 349
           DP SPLGH+  S+FS CTPI  SG S DEP       G  +K E  +Q  +P   +KE  
Sbjct: 418 DPLSPLGHTATSLFSECTPISASGSSLDEPPPTDTFTGCIVKTELVSQPWSPE-RDKETT 476

Query: 350 NHIDFTRPDALLGSGWFGLTGVCIKDPPIRTDAVGASFGDDVDSE 394
             +D TRPDALL S W G     IKD  I TD +    GDD+ S+
Sbjct: 477 TRVDITRPDALLASDWLGQGSGYIKDQVIMTDNIATLLGDDLSSD 521


>29823.m000215 r2r3-myb transcription factor, putative
          Length = 527

 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 27/32 (84%), Positives = 29/32 (90%)

Query: 1   LPGRTDNEIKNYWNTRIKRLQRAGLPIYPPEV 32
           LPGRTDNEIKN+WNTR+KR QRAGLPIYP E 
Sbjct: 111 LPGRTDNEIKNFWNTRMKRRQRAGLPIYPQEF 142