Jatropha Genome Database

JcCB0100701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0100701.10 - phase: 0 
         (240 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29776.m000489 UDP-glucose 4-epimerase, putative                       407   e-114
29724.m000863 UDP-glucose 4-epimerase, putative                       186   1e-47
29783.m000322 UDP-glucuronate 5-epimerase, putative                    73   1e-13
30190.m010846 UDP-glucose 4-epimerase, putative                        70   1e-12
29607.m000233 NAD dependent epimerase/dehydratase, putative            66   2e-11
30190.m011013 UDP-glucuronate 5-epimerase, putative                    63   1e-10
29848.m004471 dtdp-glucose 4,6-dehydratase, putative                   61   5e-10
29629.m001442 UDP-glucuronate 5-epimerase, putative                    59   1e-09
29986.m001617 dtdp-glucose 4-6-dehydratase, putative                   49   3e-06

>29776.m000489 UDP-glucose 4-epimerase, putative
          Length = 417

 Score =  407 bits (1046), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 201/248 (81%), Positives = 215/248 (86%), Gaps = 11/248 (4%)

Query: 1   MLNIGRNRNQPRNNRSMPLGGLDYADPKRKGNIVGKIFLAAALTALCIIMLKQSPTFNTR 60
           MLN GR RNQ R NRSMPL GLDYADPKRK N+VGKI LAAALTALCIIMLKQSPTFNT 
Sbjct: 1   MLNFGRARNQQRTNRSMPLAGLDYADPKRKSNVVGKIILAAALTALCIIMLKQSPTFNTP 60

Query: 61  SLFSVHEEGVTHVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPE 120
           S FS+HE+GV HVLVTGGAGYIGSHA+LRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPE
Sbjct: 61  SPFSLHEDGVVHVLVTGGAGYIGSHASLRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPE 120

Query: 121 PGRLQFIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVL 180
           PGRLQFIYADLG++K+VNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGNSKSVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVL 180

Query: 181 ESMAAHDVKTLIYSSTCATYGEPEKMPITEDTPQV-----------IAEILRVYVNQFDL 229
           ESMAAHDVKTLIYSSTCATYGEPEKMPITEDT QV             +I+  +    D+
Sbjct: 181 ESMAAHDVKTLIYSSTCATYGEPEKMPITEDTAQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query: 230 CVCLIKIF 237
            V +++ F
Sbjct: 241 AVMILRYF 248


>29724.m000863 UDP-glucose 4-epimerase, putative
          Length = 295

 Score =  186 bits (471), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 94/120 (78%), Positives = 103/120 (85%), Gaps = 7/120 (5%)

Query: 101 DNLSRGNLGAVKVLQELFPEPGRLQFIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGE 160
           DNLSRGN  AVKVLQ+LFPEPGRLQ I+ADLGDAK VNKIF+ENAFDAVMHFAAVAY+GE
Sbjct: 5   DNLSRGNFVAVKVLQKLFPEPGRLQLIHADLGDAK-VNKIFAENAFDAVMHFAAVAYIGE 63

Query: 161 STMDPLKYY------HNITSNTLVVLESMAAHDVKTLIYSSTCATYGEPEKMPITEDTPQ 214
           ST+ PL         HNI+SNTLV+LE+MAAH VKTLIYSSTC TYGEPEKMPITE+T Q
Sbjct: 64  STLGPLSVAGNCCLDHNISSNTLVLLEAMAAHHVKTLIYSSTCTTYGEPEKMPITEETHQ 123


>29783.m000322 UDP-glucuronate 5-epimerase, putative
          Length = 433

 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 96/195 (49%), Gaps = 14/195 (7%)

Query: 60  RSLFSVHE-EGVTHVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELF 118
           R+   +H   G   VLVTG AG++G+H +L L K G  V  +DN +     ++K  ++  
Sbjct: 81  RNSAQIHRPSGGVSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKSL 140

Query: 119 PEPGRLQFIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLV 178
                +  +  D+ DA+ + K+F   AF  VMH AA A V  +  +P  Y H+  +  + 
Sbjct: 141 LNSHGVFIVEGDVNDARLLAKLFDVVAFSHVMHLAAQAGVRYAMENPHSYVHSNIAGLVT 200

Query: 179 VLES-MAAHDVKTLIYSSTCATYGEPEKMPITE----DTPQVI--------AEILRVYVN 225
           +LE+  +A+    ++++S+ + YG  +K+P +E    D P  +         EI   Y +
Sbjct: 201 LLEACKSANPQPAIVWASSSSVYGLNDKVPFSESDRTDQPASLYAATKKAGEEITHTYNH 260

Query: 226 QFDLCVCLIKIFLWY 240
            + L +  ++ F  Y
Sbjct: 261 IYGLSITGLRFFTVY 275


>30190.m010846 UDP-glucose 4-epimerase, putative
          Length = 297

 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 12/104 (11%)

Query: 146 FDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLESMAAHDVKTLIYSSTCATYGEPEK 205
           FDAV+HFA +  VGES   PL Y++N    T+ +LE MAA+  K L++SS+   YG P++
Sbjct: 28  FDAVIHFAGLKAVGESVEKPLLYFNNNLIGTITLLEVMAAYRCKKLVFSSSATVYGWPKE 87

Query: 206 MPITEDTP-----------QVIAEILR-VYVNQFDLCVCLIKIF 237
           +P TE+ P             I EI R +Y +  +  + L++ F
Sbjct: 88  VPCTEEFPLSAANPYGRTKLFIEEICRDIYRSDSEWKIILLRYF 131


>29607.m000233 NAD dependent epimerase/dehydratase, putative
          Length = 622

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 10/139 (7%)

Query: 72  HVLVTGGAGYIGSHAALRLLKD--GYRVTIVDNLSRGNLGAVKVLQELFPEPG--RLQFI 127
           ++L+TG AG+I SH   RL+++   Y++ ++D L          L+ L P       +F+
Sbjct: 8   NILITGAAGFIASHVCNRLIRNYPDYKIVVLDKLD-----YCSNLKNLLPSKSSPNFKFV 62

Query: 128 YADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLES-MAAH 186
             D+G A  VN +    + D +MHFAA  +V  S  +  ++  N    T V+LE+     
Sbjct: 63  KGDIGSADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122

Query: 187 DVKTLIYSSTCATYGEPEK 205
            ++  I+ ST   YGE ++
Sbjct: 123 QIRRFIHVSTDEVYGETDE 141


>30190.m011013 UDP-glucuronate 5-epimerase, putative
          Length = 437

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 13/181 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTG AG++G+H ++ L + G  V  +DN +     ++K  ++   E   +  I  D+ 
Sbjct: 97  VLVTGAAGFVGTHVSVALKRRGDGVLGLDNFNHYYDVSLKRGRQKVLEKSGIFVIEGDIN 156

Query: 133 DAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLE-SMAAHDVKTL 191
           D   +NKIF    F  VMH AA A V  +  +P  Y ++  +  + +LE   +A+    +
Sbjct: 157 DMGLLNKIFDTVRFTHVMHLAAQAGVRYAMQNPKSYVNSNIAGFVNLLEVCKSANPQPAV 216

Query: 192 IYSSTCATYGEPEKMPITE----DTPQVI--------AEILRVYVNQFDLCVCLIKIFLW 239
           +++S+ + YG   K+P +E    D P  +         EI   Y + + L +  ++ F  
Sbjct: 217 VWASSSSVYGLNFKVPFSEKDRTDQPASLYAATKKAGEEIAHSYNHIYGLSITGLRFFTV 276

Query: 240 Y 240
           Y
Sbjct: 277 Y 277


>29848.m004471 dtdp-glucose 4,6-dehydratase, putative
          Length = 369

 Score = 60.8 bits (146), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 6/135 (4%)

Query: 73  VLVTGGAGYIGSHAALRLLKD--GYRVTIVDNLSRGNLGAVKVLQELFPEPGRLQFIYAD 130
           +L+TG AG+I SH   RL+++   Y++  +D L      +++ L      P   +F+  D
Sbjct: 13  ILITGAAGFIASHVTNRLIRNYPDYKIVALDKLDY--CSSLRNLTPCRSSPN-FKFVKGD 69

Query: 131 LGDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLES-MAAHDVK 189
           +  A  VN +      D +MHFAA  +V  S  +  ++  N    T V+LE+      +K
Sbjct: 70  IASADLVNHLLIAEDIDTIMHFAAQTHVDNSFGNSFEFTTNNIYGTHVLLEACKVTKKIK 129

Query: 190 TLIYSSTCATYGEPE 204
             I+ ST   YGE +
Sbjct: 130 RFIHVSTDEVYGETD 144


>29629.m001442 UDP-glucuronate 5-epimerase, putative
          Length = 401

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 13/181 (7%)

Query: 73  VLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPEPGRLQFIYADLG 132
           VLVTG AG++GSH +L L K G  V  +DN +     ++K  ++      ++  +  D+ 
Sbjct: 53  VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNNYYDPSLKRARQQLLLKHQVFIVEGDIN 112

Query: 133 DAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLE-SMAAHDVKTL 191
           D + + K+F    F  ++H AA A V  +  +P  Y  +  +  + +LE +  A+    +
Sbjct: 113 DGQLLAKLFDVVPFTHILHLAAQAGVRYAIQNPQSYISSNIAGFVNLLEVAKTANPQPAI 172

Query: 192 IYSSTCATYGEPEKMPITE----DTPQVI--------AEILRVYVNQFDLCVCLIKIFLW 239
           +++S+ + YG   ++P +E    D P  +         EI   Y + + L +  ++ F  
Sbjct: 173 VWASSSSVYGLNTEVPFSEIDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTV 232

Query: 240 Y 240
           Y
Sbjct: 233 Y 233


>29986.m001617 dtdp-glucose 4-6-dehydratase, putative
          Length = 419

 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 63/144 (43%), Gaps = 24/144 (16%)

Query: 73  VLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPEPGRLQFIYADLG 132
           ++VTGGAG++GSH   RL++ G  V +VDN   G    V      F  P R + I  D+ 
Sbjct: 124 IVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKENV---MHHFKNP-RFELIRHDV- 178

Query: 133 DAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHN----ITSNTLVVLE--SMAAH 186
               V  +  E   D + H A  A        P+ Y HN    I +N +  L    +A  
Sbjct: 179 ----VEPLLLE--VDQIYHLACPA-------SPVHYKHNPVKTIKTNVVGTLNMLGLAKR 225

Query: 187 DVKTLIYSSTCATYGEPEKMPITE 210
                + +ST   YG+P + P  E
Sbjct: 226 VGARFLLTSTSEVYGDPLQHPQVE 249