Jatropha Genome Database
- JcCB0100471.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0100471.10 + phase: 2 /pseudo/partial
(72 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29842.m003531 homeobox protein knotted-1, putative 144 9e-36
30170.m013647 homeobox protein knotted-1, putative 93 2e-20
29631.m001056 homeobox protein knotted-1, putative 88 1e-18
30147.m013923 homeobox protein knotted-1, putative 82 4e-17
30128.m008910 homeobox protein knotted-1, putative 75 8e-15
30190.m011101 homeobox protein knotted-1, putative 47 1e-06
29737.m001270 homeobox protein knotted-1, putative 47 2e-06
29848.m004577 homeobox protein knotted-1, putative 46 4e-06
30170.m014099 bel1 homeotic protein, putative 46 4e-06
30170.m014098 bel1 homeotic protein, putative 45 8e-06
29973.m000390 bel1 homeotic protein, putative 45 8e-06
>29842.m003531 homeobox protein knotted-1, putative
Length = 353
Score = 144 bits (363), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 65/67 (97%), Positives = 66/67 (98%)
Query: 6 ESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHYYVDNVLGNPFPM 65
ESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHYY+DNVLGNPFPM
Sbjct: 287 ESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHYYMDNVLGNPFPM 346
Query: 66 DISPTLL 72
DISP LL
Sbjct: 347 DISPALL 353
>30170.m013647 homeobox protein knotted-1, putative
Length = 259
Score = 93.2 bits (230), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 50/67 (74%), Gaps = 3/67 (4%)
Query: 6 ESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPH---YYVDNVLGNP 62
E++K+ALAESTGLDQKQINNWFINQRKRHWKPSEDMQF+VMD HP Y+D
Sbjct: 193 ETEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPQNAALYMDGHYMGD 252
Query: 63 FPMDISP 69
P + P
Sbjct: 253 GPYRLGP 259
>29631.m001056 homeobox protein knotted-1, putative
Length = 337
Score = 87.8 bits (216), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 45/53 (84%)
Query: 5 VESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHYYVDN 57
E+ K+ALA+STGLDQKQINNWFINQRKRHWKPSE+MQF V+D +Y+D+
Sbjct: 285 TEADKIALADSTGLDQKQINNWFINQRKRHWKPSENMQFAVVDNISGQFYIDD 337
>30147.m013923 homeobox protein knotted-1, putative
Length = 328
Score = 82.4 bits (202), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 47/53 (88%)
Query: 5 VESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHYYVDN 57
E+ K+ALA++TGLDQKQINNWFINQRKRHWKPSE+MQF V+D+ + +++++
Sbjct: 276 TEADKVALADATGLDQKQINNWFINQRKRHWKPSENMQFAVVDSIYGPFFMND 328
>30128.m008910 homeobox protein knotted-1, putative
Length = 327
Score = 74.7 bits (182), Expect = 8e-15, Method: Composition-based stats.
Identities = 30/43 (69%), Positives = 38/43 (88%)
Query: 6 ESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDA 48
E +K+ L+E TGLDQKQINNWFINQRKRHWKPSED+++ +M+
Sbjct: 261 EDEKVKLSEITGLDQKQINNWFINQRKRHWKPSEDVRYALMEG 303
>30190.m011101 homeobox protein knotted-1, putative
Length = 302
Score = 47.4 bits (111), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 22/31 (70%)
Query: 5 VESQKLALAESTGLDQKQINNWFINQRKRHW 35
E K L E TGL KQINNWFINQRKR+W
Sbjct: 256 TEDDKAKLVEETGLQLKQINNWFINQRKRNW 286
>29737.m001270 homeobox protein knotted-1, putative
Length = 374
Score = 46.6 bits (109), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 23/34 (67%)
Query: 5 VESQKLALAESTGLDQKQINNWFINQRKRHWKPS 38
E K L + TGL KQINNWFINQRKR+W S
Sbjct: 291 TEEDKARLVQETGLQLKQINNWFINQRKRNWHSS 324
>29848.m004577 homeobox protein knotted-1, putative
Length = 456
Score = 45.8 bits (107), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 22/31 (70%)
Query: 5 VESQKLALAESTGLDQKQINNWFINQRKRHW 35
E K L + TGL KQINNWFINQRKR+W
Sbjct: 380 TEEDKARLVQETGLQLKQINNWFINQRKRNW 410
>30170.m014099 bel1 homeotic protein, putative
Length = 469
Score = 45.8 bits (107), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 6 ESQKLALAESTGLDQKQINNWFINQRKRHWKP 37
+S+KL LA TGL + Q++NWFIN R R WKP
Sbjct: 400 DSEKLMLASQTGLTKNQVSNWFINARVRLWKP 431
>30170.m014098 bel1 homeotic protein, putative
Length = 739
Score = 45.1 bits (105), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 6 ESQKLALAESTGLDQKQINNWFINQRKRHWKP 37
+S+K+ LA+ TGL + Q+ NWFIN R R WKP
Sbjct: 458 DSEKIMLAKQTGLSRNQVANWFINARVRLWKP 489
>29973.m000390 bel1 homeotic protein, putative
Length = 599
Score = 45.1 bits (105), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 5 VESQKLALAESTGLDQKQINNWFINQRKRHWKP 37
++ KL LA+ TGL + Q++NWFIN R R WKP
Sbjct: 405 TDTDKLMLAKQTGLSRSQVSNWFINARVRLWKP 437