Jatropha Genome Database

JcCB0099801.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0099801.10 - phase: 0 
         (127 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29841.m002806 Late embryogenesis abundant protein D-7, putative        97   2e-21

>29841.m002806 Late embryogenesis abundant protein D-7, putative
          Length = 130

 Score = 97.1 bits (240), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/125 (49%), Positives = 76/125 (60%), Gaps = 17/125 (13%)

Query: 1   MASNDQSYSYRAGEATGRAEEKGNRMGDTVKEKAGEAKDWT-----------GEKAHXXX 49
           MAS+DQS+  RAGEATGRAEEKGNR  DTVKE+A EA+D T            EKAH   
Sbjct: 1   MASHDQSF--RAGEATGRAEEKGNRATDTVKERAREARDKTYETGQHAKENTAEKAHETR 58

Query: 50  XXXXXXXXXXXXXXXXXXXXXXGVLEETGEKMKHAAQKTADTVKSAFGMAHHEEEEDHVK 109
                                 GV+++TG+K+K+ AQKTADTVKSAFGMAH+ E+    K
Sbjct: 59  EKASETAEAAKDKTYEGKEKTKGVVQQTGDKVKNMAQKTADTVKSAFGMAHNGED----K 114

Query: 110 DRSGH 114
           D++GH
Sbjct: 115 DKAGH 119