Jatropha Genome Database

JcCB0098751.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0098751.20 + phase: 0 /partial
         (227 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29601.m000442 pyruvate decarboxylase, putative                        389   e-109
29900.m001589 pyruvate decarboxylase, putative                        355   9e-99
30138.m003964 pyruvate decarboxylase, putative                        315   1e-86
30138.m003963 pyruvate decarboxylase, putative                        306   5e-84
30147.m014497 acetolactate synthase, putative                          53   1e-07

>29601.m000442 pyruvate decarboxylase, putative
          Length = 607

 Score =  389 bits (998), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 191/227 (84%), Positives = 200/227 (88%), Gaps = 2/227 (0%)

Query: 1   MDTKIGSLDTCKPTNGDLCSPPNSTVSTIQGSVSPTFHTPPDS--TLGRHLARRLVQIGV 58
           MDT IGS+DT KPT  D+C P N  V T+Q S             TLGRHLARRLVQ+GV
Sbjct: 1   MDTNIGSIDTLKPTTTDVCCPANGAVCTLQSSTVSPSSIVSSPDSTLGRHLARRLVQVGV 60

Query: 59  SDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGL 118
           +DVFSVPGDFNLTLLDHLIAEPGLN+IGCCNELNAGYAADGYARSRGVGACVVTFTVGGL
Sbjct: 61  TDVFSVPGDFNLTLLDHLIAEPGLNVIGCCNELNAGYAADGYARSRGVGACVVTFTVGGL 120

Query: 119 SVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCFQAVV 178
           SVLNAIAGAYSENLPV+CIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQ VTCFQA+V
Sbjct: 121 SVLNAIAGAYSENLPVVCIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQPVTCFQAIV 180

Query: 179 NNLEDAHEQIDTAISTALKESKPVYLSVSCNLPGIPHPTFSREPVPF 225
           NNLEDAHE IDTAISTALKESKPVYLS+SCNL  IPHPTFSREPVPF
Sbjct: 181 NNLEDAHELIDTAISTALKESKPVYLSISCNLSAIPHPTFSREPVPF 227


>29900.m001589 pyruvate decarboxylase, putative
          Length = 589

 Score =  355 bits (911), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 169/182 (92%), Positives = 174/182 (95%)

Query: 44  TLGRHLARRLVQIGVSDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARS 103
           TLG HLARRLV+IGV DVFSVPGDFNLTLLDHLIAEP LNLIGCCNELNAGYAADGYARS
Sbjct: 28  TLGGHLARRLVEIGVKDVFSVPGDFNLTLLDHLIAEPELNLIGCCNELNAGYAADGYARS 87

Query: 104 RGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFSQ 163
           RGVGACVVTFTVGGLSV+NAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFSQ
Sbjct: 88  RGVGACVVTFTVGGLSVINAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFSQ 147

Query: 164 ELRCFQTVTCFQAVVNNLEDAHEQIDTAISTALKESKPVYLSVSCNLPGIPHPTFSREPV 223
           ELRCFQ VTC QAVVNNL DAHEQIDTAISTALKE+KP Y+S+SCNLPGIPHPTF REPV
Sbjct: 148 ELRCFQPVTCIQAVVNNLNDAHEQIDTAISTALKENKPAYISISCNLPGIPHPTFGREPV 207

Query: 224 PF 225
           PF
Sbjct: 208 PF 209


>30138.m003964 pyruvate decarboxylase, putative
          Length = 595

 Score =  315 bits (806), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 149/205 (72%), Positives = 173/205 (84%), Gaps = 10/205 (4%)

Query: 31  GSVSPT------FHTPPD----STLGRHLARRLVQIGVSDVFSVPGDFNLTLLDHLIAEP 80
           G+V PT      + +PP      TLG HLARRLV++GVSD+FSVPGD  LTL D+ IAEP
Sbjct: 5   GTVKPTSCNDGHYTSPPKFISAPTLGYHLARRLVEVGVSDIFSVPGDTTLTLFDYFIAEP 64

Query: 81  GLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGG 140
           GLNLIGCCNELNAGYAADGYAR+RGVGAC VTFTVGGLS+LNAIAGAYSE+LPVICIVGG
Sbjct: 65  GLNLIGCCNELNAGYAADGYARARGVGACAVTFTVGGLSILNAIAGAYSEHLPVICIVGG 124

Query: 141 PNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCFQAVVNNLEDAHEQIDTAISTALKESK 200
           PNSNDYG+ RILHHTIGLPDFSQEL+CFQ VTC QA++N+L++A EQID AI+  L+ESK
Sbjct: 125 PNSNDYGSKRILHHTIGLPDFSQELQCFQAVTCHQAIINDLDNAQEQIDKAITICLQESK 184

Query: 201 PVYLSVSCNLPGIPHPTFSREPVPF 225
           PVY+S+SCNL  IPHP+F  +P+P 
Sbjct: 185 PVYISISCNLVAIPHPSFIHKPIPL 209


>30138.m003963 pyruvate decarboxylase, putative
          Length = 548

 Score =  306 bits (784), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 142/183 (77%), Positives = 163/183 (89%), Gaps = 1/183 (0%)

Query: 44  TLGRHLARRLVQIGVSDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARS 103
           TLG HLARRLV++GVSD+FSVPGD  LTL D+ IAEPGLNL+GCCNELNAGYAADG+AR+
Sbjct: 28  TLGYHLARRLVEVGVSDIFSVPGDTTLTLFDYFIAEPGLNLVGCCNELNAGYAADGHARA 87

Query: 104 RGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSND-YGTNRILHHTIGLPDFS 162
           RGVGAC VTFTVGGLS+LNAIAGAYSE+LPVICIVG PNSND YG+ RILHHTIGLPDFS
Sbjct: 88  RGVGACAVTFTVGGLSILNAIAGAYSEDLPVICIVGSPNSNDYYGSKRILHHTIGLPDFS 147

Query: 163 QELRCFQTVTCFQAVVNNLEDAHEQIDTAISTALKESKPVYLSVSCNLPGIPHPTFSREP 222
           QELRCFQ VTC QA++N+L +A EQID AI+T L+ESKPVY+S+SCNL  IPHP+F  +P
Sbjct: 148 QELRCFQAVTCHQAIINDLNNAQEQIDKAITTCLQESKPVYISISCNLVAIPHPSFINKP 207

Query: 223 VPF 225
           +P 
Sbjct: 208 IPL 210


>30147.m014497 acetolactate synthase, putative
          Length = 660

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 3/130 (2%)

Query: 22  PNSTVSTIQGSVSPTFHTPPDSTLGRH-LARRLVQIGVSDVFSVPGDFNLTLLDHLIAEP 80
           P +T    Q S +P F  P +   G   L   L + GV+DVF+ PG  +L +   L   P
Sbjct: 66  PATTAPVPQPSPNPRF-APDEPRKGSDILVEALERQGVTDVFAYPGGASLEIHQALTRSP 124

Query: 81  GLNLIGCCNELNAGYAADGYARSRGV-GACVVTFTVGGLSVLNAIAGAYSENLPVICIVG 139
            +  +   +E    +AA+GYARS G  G C+ T   G  ++++ +A A  +++P++ I G
Sbjct: 125 IIRNVLPRHEQGGVFAAEGYARSSGKPGVCIATSGPGATNLVSGLADALLDSVPIVAITG 184

Query: 140 GPNSNDYGTN 149
                  GT+
Sbjct: 185 QVPRRMIGTD 194