Jatropha Genome Database

JcCB0097471.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0097471.10 + phase: 0 
         (511 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m008859 3-phosphoshikimate 1-carboxyvinyltransferase, puta...   881   0.0  
58955.m000013 3-phosphoshikimate 1-carboxyvinyltransferase, puta...   113   3e-25

>30174.m008859 3-phosphoshikimate 1-carboxyvinyltransferase,
           putative
          Length = 518

 Score =  881 bits (2277), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/508 (85%), Positives = 451/508 (88%), Gaps = 1/508 (0%)

Query: 5   NNYAFPNLSKPQRPKSLPSVSFKS-QFHGSPISRGLIQCQRRGDCTVRMGSIRVSASVAT 63
           N + FPNLSKPQ PKS  S      Q +GS +S GL QCQR+GD  VR+  +RVSASVAT
Sbjct: 11  NTFTFPNLSKPQIPKSSLSSVSFRSQINGSSLSWGLKQCQRKGDFAVRVAPLRVSASVAT 70

Query: 64  AEKPSTVPEIVLQPIKEISGTVKLPGSKSLSNRILLLAALSEGTTVVDNLLNSDDVRYML 123
           AEKPST PEIVLQPIKEISGTV LPGSKSLSNRILLLAALSEGTTVVDNLLNSDDVRYML
Sbjct: 71  AEKPSTAPEIVLQPIKEISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLNSDDVRYML 130

Query: 124 GALRTLGLHVEDNSELKQAIVGGCGGYFPVGKESKDDIELFLGNAGTAMRPLTAAVTAAG 183
           GALRTL L VEDNSELK+AI+ GCGG FPVG+ESK D+ELFLGNAGTAMRPLTAAVTAAG
Sbjct: 131 GALRTLRLRVEDNSELKRAIIEGCGGSFPVGRESKTDVELFLGNAGTAMRPLTAAVTAAG 190

Query: 184 GNSSYILDGVPRMRERPIGDLVVGLKQLGADVACSPTNCPPVRVNAKGGLPGGKVKLSGS 243
           GNSSYILDGVPRMRERPIGDLV GL+QLGADV CS TNCPPVRVN KGGLPGGKVKLSGS
Sbjct: 191 GNSSYILDGVPRMRERPIGDLVAGLQQLGADVTCSSTNCPPVRVNGKGGLPGGKVKLSGS 250

Query: 244 ISSQYXXXXXXXXXXXXGDVEIEIIDKLISIPYVEMTLKLMERYGVNVEHSGSWDRFFIR 303
           ISSQY            GDVEIEIIDKLISIPYVEMTLKLMERYGV VEHS SWDRFFIR
Sbjct: 251 ISSQYLTALLMAAPLALGDVEIEIIDKLISIPYVEMTLKLMERYGVFVEHSSSWDRFFIR 310

Query: 304 GGQKYRSPGNSYVEGDASSASYFLXXXXXXXXXXXVEGCGTSSLQGDVKFAEVLEKMGAK 363
           GGQKY+SPGNSYVEGDASSASYFL           VEGCGTSSLQGDVKFAEVLE+MGAK
Sbjct: 311 GGQKYKSPGNSYVEGDASSASYFLAGAAVTGGTITVEGCGTSSLQGDVKFAEVLEQMGAK 370

Query: 364 VTWTENSVTVTGPPRNSPSQKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWR 423
           VTWTENSVTVTGPPRNSP+QKHLRA+DVNMNKMPDVAMTLAVVALFADGPTAIRDVASWR
Sbjct: 371 VTWTENSVTVTGPPRNSPTQKHLRAIDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWR 430

Query: 424 VKETERMIAICTELRKLGATVEEGPDYCVITPPEKLNVAEIDTYDDHRMAMAFSLAACGD 483
           VKETERMIAICTELRKLGATVEEGPDYCVITPPEKLNV EIDTYDDHRMAMAFSLAACGD
Sbjct: 431 VKETERMIAICTELRKLGATVEEGPDYCVITPPEKLNVTEIDTYDDHRMAMAFSLAACGD 490

Query: 484 VPVTIKDPGCTRKTFPDYFEVLERFTKH 511
           VPVTIKDPGCTRKTFPDYFEVL+RFTK 
Sbjct: 491 VPVTIKDPGCTRKTFPDYFEVLQRFTKQ 518


>58955.m000013 3-phosphoshikimate 1-carboxyvinyltransferase,
           putative
          Length = 193

 Score =  113 bits (282), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/161 (45%), Positives = 97/161 (60%), Gaps = 10/161 (6%)

Query: 90  SKSLSNRILLLA-ALSEGTTVVDNLLNSDDVRYMLGALRTLGLHVEDNSELKQAIVGGCG 148
            ++LS    LLA AL++G TV+ +LL SDD   ML AL  LG+ +E+  E     V GCG
Sbjct: 21  QQALSEMTSLLAQALADGVTVIRDLLASDDTARMLEALTALGVKLENIGE-NAWQVTGCG 79

Query: 149 GYFPVGKESKDDIELFLGNAGTAMRPLTAAVTAAGGNSSYILDGVPRMRERPIGDLVVGL 208
           G FP  K      +LFLGNAGTA RPLTAA+  +GG+  Y L G+ RM ERPIGDLV  L
Sbjct: 80  GNFPNKKA-----DLFLGNAGTAFRPLTAALAFSGGD--YHLHGIARMHERPIGDLVDAL 132

Query: 209 KQLGADV-ACSPTNCPPVRVNAKGGLPGGKVKLSGSISSQY 248
           KQ GA V   +    PP++++         +K+ G +SSQ+
Sbjct: 133 KQAGAQVDYLANEGYPPLQISPAQLDVSQPIKIRGDVSSQF 173