Jatropha Genome Database

JcCB0097441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0097441.10 - phase: 2 /pseudo/partial
         (229 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30225.m001678 glycosyltransferase, putative                           231   2e-61

>30225.m001678 glycosyltransferase, putative
          Length = 537

 Score =  231 bits (590), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 107/127 (84%), Positives = 117/127 (92%)

Query: 76  GDYYGTHKWHWYFSQGFSAMLFTFLPFAIAGSIKSKCWKLSGLIAWVLIVYSILGHKEFR 135
           GDYYGTHKWHWYFSQGFS MLFTFLPF+IAGSIKSKCWK SGLIAWVLI+YS+LGHKEFR
Sbjct: 280 GDYYGTHKWHWYFSQGFSVMLFTFLPFSIAGSIKSKCWKFSGLIAWVLILYSVLGHKEFR 339

Query: 136 FVLPVLPVALIFSGYALSVMARPDSPNGDRKGSSKSHNKCLSKVGFAVIFLLCTNIPMAL 195
           FVLPVLP+AL+FSGYAL+VMARPDSP+G RKGSS    + LS+VGFAV+FLL TNIPMA 
Sbjct: 340 FVLPVLPIALMFSGYALAVMARPDSPDGKRKGSSTGQTRLLSRVGFAVVFLLATNIPMAF 399

Query: 196 YMSLVHQ 202
           YMSLVHQ
Sbjct: 400 YMSLVHQ 406