Jatropha Genome Database

JcCB0097241.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0097241.20 - phase: 2 /partial
         (441 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30068.m002601 phosphatidylcholine transfer protein, putative          706   0.0  
29844.m003162 phosphatidylcholine transfer protein, putative          386   e-107
30169.m006602 phosphatidylcholine transfer protein, putative          134   6e-32

>30068.m002601 phosphatidylcholine transfer protein, putative
          Length = 428

 Score =  706 bits (1822), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/432 (79%), Positives = 376/432 (87%), Gaps = 8/432 (1%)

Query: 14  MALWSILLDILNRPTIGDIVAELVMFMAPLWIAVIIGVLVGWAWKPKWANLGRELLDSSV 73
           MAL +ILL+IL RP++ D++ EL MF  PLW AVI+GVLVGWAWKPKWANLG     SSV
Sbjct: 1   MALLTILLEILKRPSVWDVLTELAMFTVPLWTAVIVGVLVGWAWKPKWANLG----ISSV 56

Query: 74  NKDSANTVPSP----ASSSIPTLNSLKFQLPSCISWIADDGIQKXXXXXXXXXXXXXXXK 129
             DSAN V SP    +SSSI T  S++FQLPSC+SW+AD+ IQ                 
Sbjct: 57  CNDSANKVASPVAVESSSSITTFKSMRFQLPSCMSWVADNHIQIDSASAPPSLSSDCSSS 116

Query: 130 QSQKESSGIVNEDDLEHLCKLVEEKDGGPAWIQMMDRSTPTMSYKAWRRDPENGPPQYRS 189
           Q +KE+S IVN+DDLEHLCK+V+EKDGGPAWIQMMDRSTPTM+Y+AWRRDPE GPPQYRS
Sbjct: 117 QLEKETSSIVNDDDLEHLCKIVDEKDGGPAWIQMMDRSTPTMTYQAWRRDPETGPPQYRS 176

Query: 190 STVFEDATPEMVRDFFWDDEFRMKWDDMLIHAATLEECPTTGTMIVQWVRKFPFFCSDRE 249
            TVFEDATPE VRDFFWDDEFR+KWDDM++HAATLEECPTTGTMIVQWVRKFPFFCSDRE
Sbjct: 177 RTVFEDATPEFVRDFFWDDEFRLKWDDMMLHAATLEECPTTGTMIVQWVRKFPFFCSDRE 236

Query: 250 YIIGRRIWESGRLYYCVTKGVPCMSVPRRNKPRRVDLYYSSWCVRAVESKRGDGQLTACE 309
           YIIGRRIWESGRLYYCVTKGVPC SVPRRNKPRRVDLYYSSWC+RAVESKRGDGQL+ACE
Sbjct: 237 YIIGRRIWESGRLYYCVTKGVPCSSVPRRNKPRRVDLYYSSWCIRAVESKRGDGQLSACE 296

Query: 310 VLLFHHEDMGIPWEIAKLGVRQGMWGAVKKIEPGLRAYQKQRAAGDPLSRCAFMAQINTK 369
           VLLFHHEDMGIPWEIAKLG+RQGMWGAVKKI+PGLRAYQK RAAG PLSRCAFMAQINTK
Sbjct: 297 VLLFHHEDMGIPWEIAKLGIRQGMWGAVKKIDPGLRAYQKHRAAGGPLSRCAFMAQINTK 356

Query: 370 VSADYLRSLESNANSSLEAATQDSSKKSGGNIPRMLVLGGAIALACTLDRGLLTKAVIFG 429
           VS+DYLRSLESNA+ S E  + DSSKK GGNIPR+LV+GGAIALACTLDRGLLTKAVIFG
Sbjct: 357 VSSDYLRSLESNASYSSEVESDDSSKKPGGNIPRLLVVGGAIALACTLDRGLLTKAVIFG 416

Query: 430 VARRFAKIGRRL 441
           VARRFAKIGRRL
Sbjct: 417 VARRFAKIGRRL 428


>29844.m003162 phosphatidylcholine transfer protein, putative
          Length = 442

 Score =  386 bits (991), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 207/445 (46%), Positives = 278/445 (62%), Gaps = 39/445 (8%)

Query: 20  LLDILNRPTIGDIVAELVMFMAPLWIAVIIGVLVGWAWKPKWANL--------------- 64
           L++ L RP+I +   ++++   P+W+AV+IG+++GW+W+P+W  L               
Sbjct: 8   LMEFLKRPSITETFVDILLCAVPIWLAVMIGLVIGWSWRPRWTGLVFLGLRSRFRFLWTA 67

Query: 65  ----GRELLDSSVNKDSANTVPSPASSSIPTLNSLKFQLPSCISWIADDGIQKXXXXXXX 120
               G   L  +    SA +V     S+    N    +L   ++  A     +       
Sbjct: 68  PPGFGARRLWLAFTALSAFSVCRTVWSNFKGKN---VKLAPTMATPASMAPTRNSADGGG 124

Query: 121 XXXXXXXXKQSQKESSGIVNEDDLEHLCKLVEEKDGGPAWIQMMDRSTPTMSYKAWRRDP 180
                    + Q E   +V E+DLEHL  L+E KDG   W  MM+RST  M+Y+AWR +P
Sbjct: 125 GGESVSSCGEPQ-EGEDVVTENDLEHLLHLLEGKDGQMEWQFMMERSTSNMAYQAWRHEP 183

Query: 181 ENGPPQYRSSTVFEDATPEMVRDFFWDDEFRMKWDDMLIHAATLEECPTTGTMIVQWVRK 240
           +N P  YRS TVFEDATPE+VRDFFWDDEFR+KWD ML +   LEE P +GTMIV W++K
Sbjct: 184 QNAPTVYRSRTVFEDATPELVRDFFWDDEFRLKWDPMLAYFKILEEFPHSGTMIVHWIKK 243

Query: 241 FPFFCSDREYIIGRRIWESGRLYYCVTKGVPCMSVPRRNKPRRVDLYYSSWCVRAVESKR 300
           FPFFCSDREYIIGRRIWE+G+ YYC+TKGVP   +P+R+KPRRVDLY+SSW +RAVES++
Sbjct: 244 FPFFCSDREYIIGRRIWEAGKTYYCLTKGVPYEGLPKRDKPRRVDLYFSSWVIRAVESRK 303

Query: 301 GDGQLTACEVLLFHHEDMGIPWEIAKLGVRQGMWGAVKKIEPGLRAYQKQRAAGDPLSRC 360
           GDGQ++ACEV LFH EDMGIP ++AKLGVR GMWG VKK+  G+RAYQ  R +G  LSR 
Sbjct: 304 GDGQMSACEVTLFHCEDMGIPKDVAKLGVRHGMWGTVKKLHSGMRAYQNARKSGASLSRS 363

Query: 361 AFMAQINTKVSADYLRSLESNANSSLEAATQDSSKKSGGNIPRM---------LVLGGAI 411
           A MA+I TK+S D   S++S+     E  T +  K    +I R          +V+GG +
Sbjct: 364 ALMARITTKISFD--ESMDSS-----EPVTGEEDKHGAVDIRRHKDHGIDWKWIVVGGTV 416

Query: 412 ALACTLDRGLLTKAVIFGVARRFAK 436
           AL C L  G + KA++FG  +R A+
Sbjct: 417 ALVCGLHSGAVGKALLFGAGQRIAR 441


>30169.m006602 phosphatidylcholine transfer protein, putative
          Length = 376

 Score =  134 bits (338), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 119/215 (55%), Gaps = 9/215 (4%)

Query: 136 SGIVNEDDLEHLCKLVEEKDG-GPAWIQMMDRSTPTMSYKAWRRDPENGPPQYRSSTVFE 194
           S +V++DDL+ L + ++  D     W  ++ +S   +SY A    P+  P +Y S TVFE
Sbjct: 59  SELVSDDDLKFLIQKLDLNDNDNEKWETIIHKSNNHLSYSASSFKPQGAPVKYLSVTVFE 118

Query: 195 DATPEMVRDFFWDDEFRMKWDDMLIHAATLEECPTTGTMIVQWVRKFPFFCSDREYIIGR 254
           + + E++RDF+ D+++R++WD  L+    L+   T GT I   ++KFP   + REY++  
Sbjct: 119 NCSLEVLRDFYMDNDYRLQWDKTLLQHHQLQVDRTDGTEIGLTIKKFPLL-TPREYVLAW 177

Query: 255 RIWE-SGRLYYCVTKGVPCMSVPRRNKPRRVDLYYSSWCVRAVESKRGDGQLTACEVLLF 313
           R+W+ + + +YC  K       PR  K  RV  + S W +R V  +       ACE+ ++
Sbjct: 178 RLWQGNDQTFYCFIKECEHPLAPRHKKYVRVGFFRSCWRIRKVPGR------NACEIKMY 231

Query: 314 HHEDMGIPWEIAKLGVRQGMWGAVKKIEPGLRAYQ 348
           H ED G+  E+AKL   +G+W  V K++  LR Y 
Sbjct: 232 HQEDAGLNVEMAKLAFARGIWSYVCKMDNALRKYN 266