Jatropha Genome Database

JcCB0096691.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0096691.20 - phase: 0 
         (377 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28976.m000158 conserved hypothetical protein                          183   1e-46
30170.m013673 conserved hypothetical protein                          162   2e-40
29706.m001283 conserved hypothetical protein                          124   8e-29
29700.m000761 conserved hypothetical protein                          122   2e-28
29739.m003775 conserved hypothetical protein                          121   6e-28
27496.m000094 conserved hypothetical protein                          116   2e-26
30068.m002588 conserved hypothetical protein                          115   3e-26
30190.m011066 conserved hypothetical protein                          107   6e-24
30174.m008910 conserved hypothetical protein                          106   2e-23
30073.m002312 conserved hypothetical protein                           92   3e-19
29933.m001442 conserved hypothetical protein                           50   1e-06

>28976.m000158 conserved hypothetical protein
          Length = 431

 Score =  183 bits (465), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 94/164 (57%), Positives = 115/164 (70%), Gaps = 9/164 (5%)

Query: 74  DDGLMERSGQSYTAFPYYRSAS-YSRSIDYGRENLN----GVTVAFTASQRMELKQQALI 128
           DDG ++RS +++T FPYYRS S Y+R I     N+N    G+   FT  Q MELK Q+LI
Sbjct: 77  DDGFVQRSFKTHTGFPYYRSPSAYARRIGNVTGNVNRASSGIRGPFTPYQLMELKHQSLI 136

Query: 129 YKYISASVPVPDNLLIPLKSNLRPHPYGLSAPSAGFFPSNSLGWSSLRLGYMGSSTSRDS 188
           +KYISA   VP NLLIPL+ N   +PYGL+ P+A      SLG S+L L Y   + + D 
Sbjct: 137 FKYISAGASVPTNLLIPLR-NKSVYPYGLAPPTASLLSPYSLGGSNLGLNY---ANTNDP 192

Query: 189 EPGRCRRTDGKKWRCSRDTVADQKYCEKHMNRGRYRSRKPVEAQ 232
           EPGRCRRTDGKKWRCS+D V DQKYCE+H+NRGR+RSRKPVE Q
Sbjct: 193 EPGRCRRTDGKKWRCSKDVVPDQKYCERHINRGRHRSRKPVEGQ 236


>30170.m013673 conserved hypothetical protein
          Length = 617

 Score =  162 bits (411), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/160 (53%), Positives = 109/160 (68%), Gaps = 18/160 (11%)

Query: 86  TAFPYYR---SASYSRS---IDYGR---ENLNGVTVA----FTASQRMELKQQALIYKYI 132
           +  PY+    SA+Y+R+   ++YG     N++GV       FT SQ MEL+ QALIYKYI
Sbjct: 114 STLPYFHLTSSAAYNRNTGYMNYGNFNSANMHGVYTEARGPFTPSQWMELEHQALIYKYI 173

Query: 133 SASVPVPDNLLIPLKSNLRPHPYGLSAPSAGFFPSNSLGWSSLRLGYMGSSTSRDSEPGR 192
           +A+VP+P NLLIP++  L     G S+ S G    N+L W +  LG+   S++ D EPGR
Sbjct: 174 TANVPIPSNLLIPIRKAL--DSAGFSSFSGGLLRPNTLPWGAFHLGF---SSNNDPEPGR 228

Query: 193 CRRTDGKKWRCSRDTVADQKYCEKHMNRGRYRSRKPVEAQ 232
           CRRTDGKKWRCSRD VADQKYCE+HMNRGR+RSRK VE Q
Sbjct: 229 CRRTDGKKWRCSRDAVADQKYCERHMNRGRHRSRKHVEGQ 268


>29706.m001283 conserved hypothetical protein
          Length = 340

 Score =  124 bits (311), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 58/117 (49%), Positives = 78/117 (66%), Gaps = 9/117 (7%)

Query: 114 FTASQRMELKQQALIYKYISASVPVPDNLLIPLKSNLRPHPYGLSAPSAGFFPSNSLGWS 173
           FT SQ  EL+ QALIYKY+ + +P+P  L+  +K +L       S+ ++  FP   +GW 
Sbjct: 13  FTPSQWQELEHQALIYKYMVSGIPIPPELIFTVKRSLE------SSLASRLFPHQPIGWG 66

Query: 174 SLRLGYMGSSTSRDSEPGRCRRTDGKKWRCSRDTVADQKYCEKHMNRGRYRSRKPVE 230
             ++G+   +   D EPGRCRRTDGKKWRCS++   D KYCE+HM+RGR RSRKPVE
Sbjct: 67  CFQVGFGRKA---DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVE 120


>29700.m000761 conserved hypothetical protein
          Length = 479

 Score =  122 bits (307), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/117 (52%), Positives = 78/117 (66%), Gaps = 10/117 (8%)

Query: 114 FTASQRMELKQQALIYKYISASVPVPDNLLIPLKSNLRPHPYGLSAPSAGFFPSNSLGWS 173
           FT +Q  EL++QA+IYKY+ ASVPVP +LL+P   NL   P   ++ S+      +L ++
Sbjct: 81  FTIAQWKELERQAMIYKYMMASVPVPPHLLLPTSRNLHSDPAAAASLSSLGSGGLNLKYT 140

Query: 174 SLRLGYMGSSTSRDSEPGRCRRTDGKKWRCSRDTVADQKYCEKHMNRGRYRSRKPVE 230
           +            D EPGRCRRTDGKKWRCSRD   DQKYCE+HM+RGR RSRKPVE
Sbjct: 141 N----------GADLEPGRCRRTDGKKWRCSRDAAPDQKYCERHMHRGRPRSRKPVE 187


>29739.m003775 conserved hypothetical protein
          Length = 253

 Score =  121 bits (303), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 62/136 (45%), Positives = 80/136 (58%), Gaps = 10/136 (7%)

Query: 114 FTASQRMELKQQALIYKYISASVPVPDNLLIPLKSNLRPHPYGLSAPSAGFFPSN--SLG 171
           FTASQ  EL+ QALI+KY+ + +P+P +LL  +K +    P      S+  FP     +G
Sbjct: 10  FTASQWQELEHQALIFKYMVSGIPIPSDLLFTIKRSCLDSPL-----SSKLFPRQPPHIG 64

Query: 172 WSSLRLGYMGSSTSRDSEPGRCRRTDGKKWRCSRDTVADQKYCEKHMNRGRYRSRKPVEA 231
           WS  +   MG     D EPGRCRRTDGKKWRCS++   D KYCE+HM+RG+ RSRKPVE 
Sbjct: 65  WSCFQ---MGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEV 121

Query: 232 QXXXXXXXXXXIMPVT 247
                      +  VT
Sbjct: 122 ANQTATTTNPTVSSVT 137


>27496.m000094 conserved hypothetical protein
          Length = 428

 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/118 (53%), Positives = 79/118 (66%), Gaps = 5/118 (4%)

Query: 114 FTASQRMELKQQALIYKYISASVPVPDNLLIPLK-SNLRPHPYGLSAPSAGFFPSNSLGW 172
           F+ +Q  EL+ QALIY+Y+ A   +P  LL P+K S L   PY L  P   +   +    
Sbjct: 96  FSLAQWQELELQALIYRYMLAGAAIPPELLQPIKKSLLHSPPYFLHHPLQHY---SYYQP 152

Query: 173 SSLRLGYMGSSTSRDSEPGRCRRTDGKKWRCSRDTVADQKYCEKHMNRGRYRSRKPVE 230
           + L+ GY G + + D EPGRCRRTDGKKWRCSRD VA QKYCE+H++RGR RSRKPVE
Sbjct: 153 ALLQTGYWGRA-AMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHVHRGRNRSRKPVE 209


>30068.m002588 conserved hypothetical protein
          Length = 507

 Score =  115 bits (288), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 60/122 (49%), Positives = 78/122 (63%), Gaps = 17/122 (13%)

Query: 112 VAFTASQRMELKQQALIYKYISASVPVPDNLLIPL---KSNLRPHPYGLSAPSAGFFPSN 168
           V FTA+Q  EL++Q +IYK++ AS+PVP  LLIP+   +SN  P  + +           
Sbjct: 128 VPFTAAQLQELERQTIIYKHMMASIPVPPELLIPITKTQSNASPTQFHVVK--------- 178

Query: 169 SLGWSSLRLGYMGSSTSRDSEPGRCRRTDGKKWRCSRDTVADQKYCEKHMNRGRYRSRKP 228
                SL +G + S T+ D EP RC+RTDGKKWRCSRD   DQKYCE+H ++ R RSRKP
Sbjct: 179 ----GSLEMG-ISSCTNSDPEPWRCKRTDGKKWRCSRDVAPDQKYCERHSHKSRPRSRKP 233

Query: 229 VE 230
           VE
Sbjct: 234 VE 235


>30190.m011066 conserved hypothetical protein
          Length = 233

 Score =  107 bits (268), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 62/121 (51%), Positives = 79/121 (65%), Gaps = 4/121 (3%)

Query: 111 TVAFTASQRMELKQQALIYKYISASVPVPDNLLIPLKSNLRPHPYGLSAPSAGFFPSNSL 170
           +  FT  Q  EL+ Q+LIYKYI A  PVP NL++P+  ++      L++     +PS  +
Sbjct: 68  SCGFTILQLQELQLQSLIYKYIEAGCPVPYNLVLPIWKSVSSSLGNLNSTLYQLYPS-FM 126

Query: 171 GWSSLRLGYMGSSTSRDSEPGRCRRTDGKKWRCSRDTVADQKYCEKHMNRGRYRSRKPVE 230
           G S L L Y       D EPGRCRRTDGKKWRCS++ + DQKYCE+HM+RGR RSRK VE
Sbjct: 127 GASQLHLEYR---NGMDPEPGRCRRTDGKKWRCSKEALPDQKYCERHMHRGRQRSRKLVE 183

Query: 231 A 231
           A
Sbjct: 184 A 184


>30174.m008910 conserved hypothetical protein
          Length = 436

 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/118 (45%), Positives = 69/118 (58%), Gaps = 20/118 (16%)

Query: 114 FTASQRMELKQQALIYKYISASVPVPDNLLIPLKSNLRPHPYGLSAPSAGFFPSNSLGWS 173
            TA+Q  ELK Q  IY+YI+A +PVP  L+ P+  +           +A F    S+  +
Sbjct: 52  LTAAQLNELKLQVSIYEYIAAGLPVPSALVFPIWKSF----------AASFHSCGSIANA 101

Query: 174 SLRLGYMGSSTSRDSEPGRCRRTDGKKWRCSRDTVADQKYCEKHMNRGRYRSRKPVEA 231
            +R  Y           GRCRRTDGKKWRC +  V  QKYCE+HM+RGR+RSRKPVEA
Sbjct: 102 GIRPSY----------SGRCRRTDGKKWRCKKIVVTGQKYCERHMHRGRHRSRKPVEA 149



 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 34/43 (79%)

Query: 189 EPGRCRRTDGKKWRCSRDTVADQKYCEKHMNRGRYRSRKPVEA 231
           E GRCRRTDGKKWRC RD V ++KYC+ HM+RG  + R+ +++
Sbjct: 313 ETGRCRRTDGKKWRCRRDVVPNEKYCKMHMHRGAKKRREGLQS 355


>30073.m002312 conserved hypothetical protein
          Length = 259

 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 44/82 (53%), Positives = 50/82 (60%), Gaps = 7/82 (8%)

Query: 187 DSEPGRCRRTDGKKWRCSRDTVADQKYCEKHMNRGRYRSRKPVEAQXXXXXXXXXXIMPV 246
           D EPGRCRRTDGKKWRCS+D   D KYCE+HM+RGR RSRKPVE+Q           + V
Sbjct: 15  DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVESQTMTQSSSTVTSLTV 74

Query: 247 TVISGR-------PIHAIPQLQ 261
           T  S         P+HA   LQ
Sbjct: 75  TGSSSTTGSFQSLPLHAFGNLQ 96


>29933.m001442 conserved hypothetical protein
          Length = 1033

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 28/39 (71%)

Query: 189 EPGRCRRTDGKKWRCSRDTVADQKYCEKHMNRGRYRSRK 227
           E  RC+RTDG++WRC+R  + D+K CE H  +GR+R  K
Sbjct: 10  EHLRCKRTDGRQWRCNRRVMDDKKLCEIHHLQGRHRQYK 48