Jatropha Genome Database

JcCB0095931.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0095931.10 + phase: 0 /partial
         (154 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29506.m000169 dynamin, putative                                       243   3e-65
29848.m004504 dynamin, putative                                       115   1e-26

>29506.m000169 dynamin, putative
          Length = 837

 Score =  243 bits (619), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 119/156 (76%), Positives = 128/156 (82%), Gaps = 2/156 (1%)

Query: 1   KNIEDSIPKAIMHFWVNHTKRELHNVFIKKLYRENLFEEMLQEPDEIATKRKHTRDKLRV 60
           KNIEDSIPKAIMHF VNHTKRELHNVFIKKLYRENLFEEMLQEP+EIA KRK TR+ LR+
Sbjct: 681 KNIEDSIPKAIMHFLVNHTKRELHNVFIKKLYRENLFEEMLQEPEEIAMKRKRTRETLRI 740

Query: 61  LQQAFRTLDELPLEAETVERGYSLGADTTGLPKIRGLPTXXXXXXXXXXXXXXXXPRNTK 120
           LQQA++TLDELPLEAETVERGYSLGAD TGLPKI GLPT                P+N K
Sbjct: 741 LQQAYKTLDELPLEAETVERGYSLGADPTGLPKIHGLPTSSLYSTSSGSSDYSASPKNPK 800

Query: 121 SRKSSHSGELQSHFYANAESNGSGQPYV--LYPTVD 154
           SRKSSHSGELQSHFY NA+SNG  +PY+  LYPTVD
Sbjct: 801 SRKSSHSGELQSHFYVNADSNGGSRPYMPGLYPTVD 836


>29848.m004504 dynamin, putative
          Length = 797

 Score =  115 bits (287), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/95 (61%), Positives = 70/95 (73%), Gaps = 5/95 (5%)

Query: 1   KNIEDSIPKAIMHFWVNHTKRELHNVFIKKLYRENLFEEMLQEPDEIATKRKHTRDKLRV 60
           KNI+D +PKAIMHF VN+TKRELHN FI+KLYRE+LFEE+LQE DE+  KRKH R+   V
Sbjct: 660 KNIQDLVPKAIMHFLVNYTKRELHNTFIQKLYRESLFEELLQEQDEVIAKRKHAREVFHV 719

Query: 61  LQQAFRTLDELPLEAETVERGYSLGAD---TTGLP 92
           LQQA +TLDE  +E++   R      D   TTGLP
Sbjct: 720 LQQAVQTLDE--VESDVSSRCSYSSVDTGSTTGLP 752