Jatropha Genome Database

JcCB0095581.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0095581.10 + phase: 1 /partial
         (172 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008583 sterol isomerase, putative                              261   8e-71

>30128.m008583 sterol isomerase, putative
          Length = 220

 Score =  261 bits (668), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 127/168 (75%), Positives = 140/168 (83%)

Query: 4   KTAKIDRILMCWWAFTGLTHVILEGYFAFSPEFYKEKTPFYLAEVWKEYSKGDSRYAARD 63
           K AKIDR LMCWWAFTGLTH+ILEGYF FSPEFYK+KT FYLAEVWKEYSKGDSRYAARD
Sbjct: 52  KAAKIDRWLMCWWAFTGLTHIILEGYFVFSPEFYKDKTSFYLAEVWKEYSKGDSRYAARD 111

Query: 64  AGIVSVEGLTAVLEGPASLLAVYAIATKKSYSYILQFAISLGQLYGTAVYFITAFLEGDN 123
           + +V+VEGLTAVLEGPASLLAVYAIA  KSYSYILQFAISLGQLYGTAVYF+T +L+G N
Sbjct: 112 SAVVAVEGLTAVLEGPASLLAVYAIAAGKSYSYILQFAISLGQLYGTAVYFLTPYLDGYN 171

Query: 124 FXXXXXXXXXXXXXXXXSWVVIPSIISIRCWKKICAAFEAQGQKKTKT 171
           +                SWVVIPS+I IR WKKICAAF+ QGQ+KTK+
Sbjct: 172 YASSPYYHYAYYIGANASWVVIPSLICIRSWKKICAAFQVQGQRKTKS 219