Jatropha Genome Database
- JcCB0095561.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0095561.20 - phase: 2 /TE
(241 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29910.m000930 RNA binding protein, putative 87 7e-18
29838.m001683 RNA binding protein, putative 82 3e-16
29813.m001504 nucleic acid binding protein, putative 78 4e-15
30190.m011210 conserved hypothetical protein 72 2e-13
30068.m002537 conserved hypothetical protein 65 3e-11
27622.m000150 conserved hypothetical protein 65 4e-11
29927.m000608 hypothetical protein 64 5e-11
30152.m002446 conserved hypothetical protein 54 6e-08
28153.m000273 conserved hypothetical protein 49 2e-06
28612.m000120 conserved hypothetical protein 48 3e-06
29629.m001385 conserved hypothetical protein 47 6e-06
>29910.m000930 RNA binding protein, putative
Length = 446
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 104/243 (42%), Gaps = 5/243 (2%)
Query: 2 WIVGDGSTIRI*KDKWLADTNQHR---ILSRPTISNENATMSHLILQNPKQWNVDLISAI 58
W VG G I + W+ + + + + P ++N +A S LI Q +WN +L+ A
Sbjct: 8 WRVGSGYRINLLDVSWVPSFHTGKPCLLQNAPVLANNSA--SSLINQEDCEWNCNLVRAC 65
Query: 59 FAREEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLHEDSLSQSYASSFVPVST 118
F++++ IL I R++ DVR S G + RS Y + L+ + S+ +
Sbjct: 66 FSQQDAEAILQIKPSHRKSPDVRYWVHSNSGIFSSRSTYYIAWNSLLNFTPPSTSHGTAP 125
Query: 119 AWKQLWQQNILPKVKHFVHRACKNHLPAADSLVQRGMLIDVVGEVCGLRIERVIHALKGC 178
+ W+ NIL VKHF+ R N LP ++L R + + + CG +E + K C
Sbjct: 126 VVNKCWRLNILHGVKHFMWRLNHNLLPCIENLKNRKIDMGEICSRCGGCVETQTYVFKKC 185
Query: 179 ILGEQVWKYSHLRLTTSKCQALSFMEWFATIISKFQKEQIELFLMTAWAIWHAQNLLKFE 238
W L L W I S + IE F M W W+ +N FE
Sbjct: 186 QFVRSFWLTYPLGLRVDTIVVEDLKNWVNQIHSVGDDDFIEKFAMLLWCYWNLRNKFIFE 245
Query: 239 HKR 241
K
Sbjct: 246 RKE 248
>29838.m001683 RNA binding protein, putative
Length = 421
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 7/208 (3%)
Query: 36 NATMSHLILQNPKQWNVDLISAIFAREEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRS 95
+AT+ L+L N W+V IS E +IL I L L R D+ + +K GKY VRS
Sbjct: 18 DATVDALLLDN-GSWDVRFISENLPFEA-EQILSIRLSLCRQHDIIVWHYTKDGKYNVRS 75
Query: 96 GYGLLHEDSLSQSYAS--SFVPV-STAWKQLWQQNILPKVKHFVHRACKNHLPAADSLVQ 152
GY E + + + S P+ S WK W+ + PKV + + + K LP +L++
Sbjct: 76 GYHFAKELKIQDQHTANGSGAPIESLFWKSFWKVKVPPKVCNLLWQLEKAALPVKANLIR 135
Query: 153 RGMLIDVVGEVCGLRIERVIHALKGCILGEQVWKYSHLRLTTSKCQALSFMEWFATIISK 212
RG+ I + C +E V H + L ++W + + L W
Sbjct: 136 RGVDIQLPCLQCQ-NVETVEHLIWDYFLSRKIWGKVDMSALCDE-DDLDIFAWLQHCFKV 193
Query: 213 FQKEQIELFLMTAWAIWHAQNLLKFEHK 240
+ F++T W IW+A+N L FE+K
Sbjct: 194 LLNSSLAQFMITVWGIWYARNQLCFENK 221
>29813.m001504 nucleic acid binding protein, putative
Length = 483
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 7/241 (2%)
Query: 1 QWIVGDGSTIRI*KDKWLADTNQHRILSRPTISNENATMSHLILQNPKQWNVDLISAIFA 60
QW +G G+ + I +WL D + I + + L+ W+ ++++ +F+
Sbjct: 70 QWKIGKGTEVSIGLHEWLLDASNGFIETNLPDELRLQPVCSLLKPGTCDWDQEILNDLFS 129
Query: 61 REEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLHEDSLSQSYASSFVPVSTAW 120
+ I I L +D GK+ V+ Y + D S Y S+ V W
Sbjct: 130 ERDKNLINSIVLSPTVGTDQLFWFKDPKGKFSVKDVYRVQQPD-FSVLYPSNVV----VW 184
Query: 121 KQLWQQNILPKVKHFVHRACKNHLPAADSLVQRGMLIDVVGEVCGLRIERVIHALKGCIL 180
++LW+ NI K K F+ RA N LP +LV R + D C + E ++H L C +
Sbjct: 185 RRLWKLNIAAKCKVFMWRALTNRLPVRTNLVMRKVTEDSSCPCCVSQPETIMHILVLCDV 244
Query: 181 GEQVWKYSHLRLTTSKCQALSFMEWFATIISKFQKEQIELFLMTAWAIWHAQNLLKFEHK 240
Q WKY +L S Q + +E ++ F + F++ W++W N + + K
Sbjct: 245 TTQSWKYVNLYQFLS--QVSNLLEGARSVFEHFDDSIVASFVVLWWSLWTNMNDVVWNGK 302
Query: 241 R 241
+
Sbjct: 303 K 303
>30190.m011210 conserved hypothetical protein
Length = 247
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 30/220 (13%)
Query: 1 QWIVGDGSTIRI*KDKWLADTNQHRILSRPTISNENATMSHLILQNPKQWNVDLISAIFA 60
+W VG+G I + D WL T + + +A + L+L ++WN +LI F+
Sbjct: 32 RWRVGNGRNISVWNDGWLPGTAPFMVGQGTGDLSRDALVRDLLLDGGRRWNNELIVEKFS 91
Query: 61 REEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLHEDSLSQSYASSFVPVSTAW 120
R++ I+ I PLS + G +D L Y+S W
Sbjct: 92 RDDADSIMGI-------------PLS------INPG-----QDKLIWHYSSK------VW 121
Query: 121 KQLWQQNILPKVKHFVHRACKNHLPAADSLVQRGMLIDVVGEVCGLRIERVIHALKGCIL 180
Q+W+ I PK+KHF+ R + LP + L +R L + E CG E H
Sbjct: 122 SQIWRLAIPPKLKHFMWRFVRGILPTRELLFKRTGLGTNICERCGASDENADHIFVHFRW 181
Query: 181 GEQVWKYSHLRLTTSKCQALSFMEWFATIISKFQKEQIEL 220
+W S L L T + S ++WF ++++ ++ + L
Sbjct: 182 VRCIWFGSVLGLNTQGFENSSIVDWFLSMLNTMDEDGLSL 221
>30068.m002537 conserved hypothetical protein
Length = 668
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 8/159 (5%)
Query: 35 ENATMSHLILQNPKQWNVDLISAIFAREEMRKILFISLGLRRNSDVRI*PLSKHGKYIVR 94
E+AT++ ++ N ++W+ D++ +F + R I I L R D G Y+V+
Sbjct: 351 EDATVAGILQINERRWDGDILVDLFNGRDKRLIESIPLTNRNVEDSWYWLFDDKGNYLVK 410
Query: 95 SGYGLLHEDSLSQSYASSFVPVSTAWKQLWQQNILPKVKHFVHRACKNHLPAADSLVQRG 154
+ Y LL D L + P ++ W + W+ I KV++ + + C N + A +L R
Sbjct: 411 NCYRLLQGD-LGR-------PETSFWNKFWKLKIPTKVRNLMWKICSNCIRTAMNLRMRY 462
Query: 155 MLIDVVGEVCGLRIERVIHALKGCILGEQVWKYSHLRLT 193
+ +D + + C E + H L GC + + W R +
Sbjct: 463 VDLDPLCKWCNREPETLFHVLFGCSMARECWDLLGFRFS 501
>27622.m000150 conserved hypothetical protein
Length = 262
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 69/155 (44%), Gaps = 3/155 (1%)
Query: 2 WIVGDGSTIRI*KDKWLADTNQHRILSRPTISNENATMSHLILQNPKQWNVDLISAIFAR 61
W VG+G IRI L N + L + + A + LI WN +LI + F
Sbjct: 27 WRVGNGLYIRIWYPNGLIGENSKKPLVEGGLP-DGARVRDLIDPVSGSWNRELIMSNFLP 85
Query: 62 EEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYG--LLHEDSLSQSYASSFVPVSTA 119
E IL + L LR+ D+ P S+ G Y V+S Y L ++ + +S P
Sbjct: 86 FEADAILRLPLSLRQPLDILFWPHSEDGSYYVKSRYHHVLFNKRFNADKSSSGQNPFGKM 145
Query: 120 WKQLWQQNILPKVKHFVHRACKNHLPAADSLVQRG 154
W + W NI KVKHF R N LP +L RG
Sbjct: 146 WSKDWFLNIPSKVKHFYWRLLNNILPCQTALFNRG 180
>29927.m000608 hypothetical protein
Length = 339
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 35 ENATMSHLILQNPKQWNVDLISAIFAREEMRKILFISLGLRRNSDVRI*PLSKHGKYIVR 94
E+A ++ LI + KQW VD+I F+ +E KI+ + + R +D + GK+ VR
Sbjct: 18 EDARVAELIDVDQKQWKVDVICKNFSNDEATKIISMPISFRLPNDKQYWQYPISGKFSVR 77
Query: 95 SGYGLLHEDSLSQSYASSFVPVSTA-WKQLWQQNILPKVKHFVHRAC 140
S Y L SQ+ VS WK++WQ N+ KV+HF+ RAC
Sbjct: 78 STYHLAILTISSQTTTRPNQSVSDPLWKKIWQVNVPSKVRHFLWRAC 124
>30152.m002446 conserved hypothetical protein
Length = 260
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 36 NATMSHLILQNPKQWNVDLISAIFAREEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRS 95
+ T+SHL+L N WNV+LI+ F + IL I D K G Y V+S
Sbjct: 2 DTTVSHLLLPN-GAWNVNLITQHFLSHDADSILSIPRPQFSCLDRVCWHFKKRGTYSVKS 60
Query: 96 GYGLLHEDSLSQSYASSFVPVSTAWKQLWQQNILPKVKHFVHRACKNHLPAADSLVQRGM 155
Y L + Q+ +SS + K +W N+ PK++ F+ R + LP SL++ +
Sbjct: 61 VYELGALPDVHQASSSSSRLLCWG-KYIWSLNLPPKIRIFLWRLYNHILPVFASLIRHHV 119
Query: 156 LIDVVGEVCGLRIERVIHALKGCILGEQVWKYS 188
+ CG E HAL C ++WK S
Sbjct: 120 PVVPHCRWCGWEDE--CHALFNCYASMKIWKNS 150
>28153.m000273 conserved hypothetical protein
Length = 339
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 62/153 (40%), Gaps = 5/153 (3%)
Query: 1 QWIVGDGSTIRI*KDKWLADTNQHRILSRPTISNENATMSHLILQNPKQWNVDLISAIFA 60
+W +G G TI I WL D I + +S L +W+ ++ +F
Sbjct: 59 RWKIGRGETITIGHHAWLLDDTNGFIQTDLLEEVCRKPVSCLFKTGTFEWDNKILDDLFN 118
Query: 61 REEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLHEDSLSQSYASSFVPVSTAW 120
+ R I I L D G + VR Y L D LS SY+ S W
Sbjct: 119 DRDKRLIHNIVLSHVAELDRVYWHRDVKGNFSVRDAYRLQQHD-LSSSYSGD----SVVW 173
Query: 121 KQLWQQNILPKVKHFVHRACKNHLPAADSLVQR 153
+LW+ NI K K F+ RA N LP +LV +
Sbjct: 174 SKLWRLNITSKCKIFMWRALLNILPTRVNLVTK 206
>28612.m000120 conserved hypothetical protein
Length = 168
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%)
Query: 132 VKHFVHRACKNHLPAADSLVQRGMLIDVVGEVCGLRIERVIHALKGCILGEQVWKYSHLR 191
VK F+ R N LP +L +RG+ +DV+ CG E +++L + W S L
Sbjct: 19 VKQFLWRIDLNSLPCLANLARRGISVDVMCSWCGHEFEDQLYSLNDYPISRSYWLASPLG 78
Query: 192 LTTSKCQALSFMEWFATIISKFQKEQIELFLMTAWAIWHAQN 233
+ + + A W ++ S + +E F + W W +N
Sbjct: 79 IQSDQVPATDVRMWLDSVASLKDDQLLETFSVLLWNCWALKN 120
>29629.m001385 conserved hypothetical protein
Length = 276
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 53/121 (43%)
Query: 1 QWIVGDGSTIRI*KDKWLADTNQHRILSRPTISNENATMSHLILQNPKQWNVDLISAIFA 60
+W VG GS+I + +D W+ + N +R E + ++ +W+V++I IF
Sbjct: 55 RWRVGVGSSISVWQDLWILNDNLFLFRTRVKRVLEGIKVRDFLIPGTNEWDVEMIHEIFE 114
Query: 61 REEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLHEDSLSQSYASSFVPVSTAW 120
++ IL + L+ D I G Y V++GY + L +P + W
Sbjct: 115 EVDVGDILKLPADLQGQEDKLIWSYDTRGLYPVKTGYQVYTNHVLYVDQQFDVLPWTRVW 174
Query: 121 K 121
K
Sbjct: 175 K 175