Jatropha Genome Database

JcCB0093811.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0093811.10 - phase: 0 
         (442 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29993.m001037 4-hydroxyphenylpyruvate dioxygenase, putative           767   0.0  

>29993.m001037 4-hydroxyphenylpyruvate dioxygenase, putative
          Length = 441

 Score =  767 bits (1980), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/442 (82%), Positives = 398/442 (90%), Gaps = 3/442 (0%)

Query: 1   MGKQDDTVASAAAEGFQLVGFSNFVRTNPRSDRFKVKRFHHVEFWCTDATNTARRFSWGL 60
           MGK++D V+S   +GF+LVGFSNFVR NP+SDRFKVKRFHHVEFWCTDATNTARRFSWGL
Sbjct: 1   MGKENDVVSSTPEQGFKLVGFSNFVRANPKSDRFKVKRFHHVEFWCTDATNTARRFSWGL 60

Query: 61  GMPIVVKSDISTGNVTHASYLLRSGDLNFLFTAPYSPSIAAMENLSNTATASIPTFNHED 120
           GMPIV KSD+STGNVTHASYLLRSGDLNFLFTAPYSPSIAAMENLS+TATASIPTF+HE 
Sbjct: 61  GMPIVAKSDLSTGNVTHASYLLRSGDLNFLFTAPYSPSIAAMENLSHTATASIPTFSHET 120

Query: 121 CRNFTAKHGLAVRAIALEVEDAVIAFNTSVAHGAQPSAEPIALDNRAVVAEVHLYGDVVL 180
           CR F+AKHGLAVRAIA+EVEDA IAF TS +HGA+PSAEPI LDNRAV+AEVHLYGDVVL
Sbjct: 121 CRYFSAKHGLAVRAIAIEVEDAEIAFRTSASHGAKPSAEPILLDNRAVIAEVHLYGDVVL 180

Query: 181 RYISYYNSNPNDDHDWFLPKFEAMDESSSFSLDYGIRRLDHAVGNVPELAPAVSYVKAFT 240
           RYISY N   N +   FLP+FE +DE++SF +DYGIRRLDHAVGNVPELAP VSYVK FT
Sbjct: 181 RYISYKNEGSNFE---FLPRFEPVDEATSFPVDYGIRRLDHAVGNVPELAPVVSYVKQFT 237

Query: 241 GFHEFAEFTAEDVGTNESGLNSVVLANNEETVLLPLNEPVFGTKRKSQIQTYLEHNEGAG 300
           GFHEFAEFT EDVGT+ESGLNSVVLANNEETVL+P+NEPVFGTKRKSQIQTYLEHNEGAG
Sbjct: 238 GFHEFAEFTTEDVGTSESGLNSVVLANNEETVLIPMNEPVFGTKRKSQIQTYLEHNEGAG 297

Query: 301 VQHLALASENIFRTLREMRKRSCIGGFEFMPSPPPTYYKNLKNRVGDVLTDDQIKECEEL 360
           VQHLALASE+IFRTLREMRKRS +GGFEFMPSPPPTYYKNLKNR GDVL+D+QIKECEEL
Sbjct: 298 VQHLALASEDIFRTLREMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLSDEQIKECEEL 357

Query: 361 GILVDRDDHGTLLQIFTKPLGDRPTIFIEIIQRVGCMLKDEAXXXXXXXXXXXXXXXNFS 420
           GILVDRDD GTLLQIFTKP+GDRPTIFIEIIQRVGCMLKD+A               NFS
Sbjct: 358 GILVDRDDQGTLLQIFTKPVGDRPTIFIEIIQRVGCMLKDDAGKEYQKGGCGGFGKGNFS 417

Query: 421 ELFKSIEEYEKTLEAKRIAEAA 442
           ELFKSIEE+EKTLEA+R+ EAA
Sbjct: 418 ELFKSIEEFEKTLEARRVTEAA 439