Jatropha Genome Database

JcCB0091771.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0091771.10 - phase: 0 /partial
         (294 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30068.m002561 conserved hypothetical protein                          538   e-153
30098.m001746 conserved hypothetical protein                          480   e-136
29172.m000216 conserved hypothetical protein                           75   5e-14

>30068.m002561 conserved hypothetical protein
          Length = 460

 Score =  538 bits (1387), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 266/289 (92%), Positives = 277/289 (95%), Gaps = 3/289 (1%)

Query: 6   HGLVAIMSGLFGNLLVDNLGLGAVAPFDAAACFLAIGMAIILSSWTENYGDPSENKDLLS 65
           +GLVAIM+GLFGNLLVDNLGLG VAPFDAAACFLAIGMAIILSSWTENYGD SE+KDLLS
Sbjct: 175 NGLVAIMAGLFGNLLVDNLGLGPVAPFDAAACFLAIGMAIILSSWTENYGDTSESKDLLS 234

Query: 66  QFKAAAVAIASGEIHEKIALLGAIQSLFEGSMYTFVFLWTPSLSPNGEEIPHGFIFATFM 125
           QFK AAVAIAS    EKIALLGAIQSLFEGSMYTFVFLWTP+LSPNGE+IPHGFIFATFM
Sbjct: 235 QFKGAAVAIAS---DEKIALLGAIQSLFEGSMYTFVFLWTPALSPNGEDIPHGFIFATFM 291

Query: 126 LASMLGSSIASRLMAHSSPKVESYMQIVFVISAASLLLPVITSFLIVPTGVKGGSISFSG 185
           LASMLGSSIASRLMA SS KVESYMQIVF+ISAASLLLPVITSFLIVP+GV+GG ISFS 
Sbjct: 292 LASMLGSSIASRLMARSSIKVESYMQIVFIISAASLLLPVITSFLIVPSGVRGGGISFSA 351

Query: 186 CVQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIVLYNVDAFP 245
           CVQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLN+FVC+VLYNVDAFP
Sbjct: 352 CVQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVDAFP 411

Query: 246 IIVMFGMCSIFLFVASLLQRRLMVIAESQKSRSPDWTAMREMEAEPLNA 294
           IIVMFGMCSIFLFVASLLQRRLM+IAESQKSRS DWTAMREMEAEPLNA
Sbjct: 412 IIVMFGMCSIFLFVASLLQRRLMIIAESQKSRSQDWTAMREMEAEPLNA 460


>30098.m001746 conserved hypothetical protein
          Length = 460

 Score =  480 bits (1235), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 235/290 (81%), Positives = 263/290 (90%), Gaps = 7/290 (2%)

Query: 6   HGLVAIMSGLFGNLLVDNLGLGAVAPFDAAACFLAIGMAIILSSWTENYGDPSENKDLLS 65
           +GL+AI+SGLFGNLLVD   LG VAPFDAAACFLAIGMAII SSWTEN+GD SE+KDLL+
Sbjct: 175 NGLIAILSGLFGNLLVDTFALGPVAPFDAAACFLAIGMAIIFSSWTENFGDHSESKDLLT 234

Query: 66  QFKAAAVAIASGEIHEKIALLGAIQSLFEGSMYTFVFLWTPSLSPNGEEIPHGFIFATFM 125
           QF+ AA+AIAS    EKIALLGAIQSLFEGSMYTFVFLWTP+LSPN EEIPHGFIFATFM
Sbjct: 235 QFRGAAMAIAS---DEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFM 291

Query: 126 LASMLGSSIASRLMAHSSPKVESYMQIVFVISAASLLLPVITSFLIVPTGVKGGSISFSG 185
           LASMLGSS+ASRLMAHSSP+VESYMQIVFV+S+ SL+LP+ T+FL+ P+  +GG ISFSG
Sbjct: 292 LASMLGSSLASRLMAHSSPRVESYMQIVFVVSSISLMLPIATNFLVAPSKARGGGISFSG 351

Query: 186 CVQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIVLYNVDAFP 245
           C+QLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLN+FVCIVLYNV+AFP
Sbjct: 352 CLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCIVLYNVNAFP 411

Query: 246 IIVMFGMCSIFLFVASLLQRRLMVIAESQKSRSPDWTAM--REMEAEPLN 293
           I VMFGMCSIFLF+AS+LQRRLMVI  S K ++ DWTA+  R+ EAEPLN
Sbjct: 412 ITVMFGMCSIFLFMASILQRRLMVI--SDKPKAEDWTALKDRDTEAEPLN 459


>29172.m000216 conserved hypothetical protein
          Length = 424

 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 110/235 (46%), Gaps = 26/235 (11%)

Query: 11  IMSGLFGN-LLVDNLGLGAVAPFDAAACFLAIGMAIILSSWTEN-YGDPSENKDLLSQFK 68
           I S + GN LL  N   G ++ + AA+    IG+  +   W E    + S+N      F+
Sbjct: 198 IGSQVLGNWLLGSNPEKGIMSSYTAASFLAMIGILCLSKGWKETTQSEASQN------FR 251

Query: 69  AAAVAIASGEIHEKIALLGAIQSLFEGSMYTFVFLWTPSLSPNGEEIPHGFIFATFMLAS 128
            +   I +    +++ LLG   S  + S+  F  LW P+L  +G E+  G ++  F+ + 
Sbjct: 252 VSYTHIFT---DKRMWLLGFAHSCLQFSVAVFWILWAPTLVADGREVHLGLVYPCFLGSR 308

Query: 129 MLGSSIASRLMAHSSP-KVESYMQIVFVISAASLLLPVITSFLIVPTGVKGGSISFSGCV 187
           MLGS++   L+  SS  + E  +   F      L+L   +SF+       G  +S     
Sbjct: 309 MLGSTVFPWLLTGSSSLRTEDCLGYAF------LVLGFASSFVAYDYQEIGALVSV---- 358

Query: 188 QLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIVLYNVD 242
               FC F A VG+  PS+ ++R+ ++P E R  +++F  +P N  +  +L  V 
Sbjct: 359 ----FCVFHAGVGLIIPSLARLRTMHVPNELRGGMISFSLVPANAAILFLLIQVQ 409