Jatropha Genome Database

JcCB0091711.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0091711.10 - phase: 0 /partial
         (259 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29751.m001869 C-4 methyl sterol oxidase, putative                     518   e-147
30190.m011039 C-4 methyl sterol oxidase, putative                     216   8e-57
29813.m001475 sur2 hydroxylase/desaturase, putative                    68   4e-12
28644.m000923 sur2 hydroxylase/desaturase, putative                    64   6e-11
30205.m001612 sterol desaturase, putative                              48   5e-06
29783.m000308 sterol desaturase, putative                              47   9e-06

>29751.m001869 C-4 methyl sterol oxidase, putative
          Length = 269

 Score =  518 bits (1333), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 248/259 (95%), Positives = 255/259 (98%)

Query: 1   YLITHFSDFQLACLGSFFLHESVFFLSGLPFIYLERAGWLSKYKIQTKNNSPAAQEKCIT 60
           YLITHFSDFQLACLGSFFLHESVFFLSGLPFIY ERAGWLSKYKIQTKNNSPAAQEKCIT
Sbjct: 11  YLITHFSDFQLACLGSFFLHESVFFLSGLPFIYFERAGWLSKYKIQTKNNSPAAQEKCIT 70

Query: 61  RLLLYHFGVNLPVMLFSYPVFRYMGMRSDLPLPSWKVVLTQIIFYFILEDFVFYWGHRIL 120
           RLLLYHFGVNLPVM+FSYPVF+YMGMRS LPLPSWKVVLTQIIFYFILEDFVFYWGHRIL
Sbjct: 71  RLLLYHFGVNLPVMIFSYPVFKYMGMRSSLPLPSWKVVLTQIIFYFILEDFVFYWGHRIL 130

Query: 121 HTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPHLITLWLWMMLR 180
           HTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPHLITLWLWM+LR
Sbjct: 131 HTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPHLITLWLWMVLR 190

Query: 181 VLETVEAHCGYHFPWSLSNFIPLYGGADFHDYHHRLLYTKSGNYSSTFIYMDWIFGTDKG 240
           VLETVEAHCGYHFPWSLSNF+PLYGGADFHDYHHRLLYTKSGNYSSTFIYMDWIFGTD G
Sbjct: 191 VLETVEAHCGYHFPWSLSNFMPLYGGADFHDYHHRLLYTKSGNYSSTFIYMDWIFGTDVG 250

Query: 241 YRKLKALKTDGVEDGSKQM 259
           YRKLKALK+ GVE+G+KQM
Sbjct: 251 YRKLKALKSSGVENGNKQM 269


>30190.m011039 C-4 methyl sterol oxidase, putative
          Length = 243

 Score =  216 bits (550), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 107/227 (47%), Positives = 145/227 (63%), Gaps = 4/227 (1%)

Query: 36  RAGWLSKYKIQTKNN-SPAAQEKCITRLLLYHFGVNLPVMLFSYPVFRYMGMRSDLPLPS 94
           R     KYKIQ K   S +   KC   ++   F +  P+ L SYP  + +G+R+ LPLPS
Sbjct: 2   RLAGFDKYKIQPKVKLSWSEMLKCYKDVMKMFFFIVGPLQLVSYPSIKMIGIRTSLPLPS 61

Query: 95  WKVVLTQIIFYFILEDFVFYWGHRILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILF 154
              +  Q++ YF++ED+  YW HR LH KW Y+ +HSVHHEYA P G  + YAH AEIL 
Sbjct: 62  GWEIFLQLLVYFLVEDYTNYWIHRFLHGKWGYEKIHSVHHEYAAPIGFAAPYAHWAEILI 121

Query: 155 LGFATIIGPAITGPHLITLWLWMMLRVLETVEAHCGYHFPWSLSNFIPLYGGADFHDYHH 214
           LG  + +GPAI   H+IT WLW+ LR +E +E H GY FPW+ + +IP YGGAD+HDYHH
Sbjct: 122 LGIPSFLGPAIVPGHMITFWLWIALRQIEAIETHSGYDFPWTPTKYIPFYGGADYHDYHH 181

Query: 215 RLLYTKSGNYSSTFIYMDWIFGTDKGYR-KLKALK--TDGVEDGSKQ 258
            +      N++S F Y D+I+GTDKGYR + K +K   +G+E+G  Q
Sbjct: 182 YVGGQSQSNFASVFTYCDFIYGTDKGYRFQKKVIKKLKEGLENGGNQ 228


>29813.m001475 sur2 hydroxylase/desaturase, putative
          Length = 258

 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 20/212 (9%)

Query: 38  GWLSKYKIQTKNNSPAAQ---EKCITRLLLYHFGVNLPVMLFSYPVFRYMGMRSDLPL-- 92
           G+   Y++ TK +        +  + + +L    +   V +    +F   G  S+  +  
Sbjct: 30  GYFDNYRLHTKQDEDEKNLVSKSTVVKGVLLQQAIQAVVAII---LFTVTGDDSETAMDQ 86

Query: 93  -PSWKVVLTQIIFYFILEDFVFYWGHRILH-TKWLYKHVHSVHHEYATPFGLTSEYAHPA 150
            PS  ++  Q +   ++ D   Y+ HR +H  K+LYKH+HS HH    P+   + Y HP 
Sbjct: 87  KPSLMILARQFVTAMLVLDTWQYFMHRYMHHNKFLYKHIHSQHHRLVVPYAFGALYNHPV 146

Query: 151 EILFLGFATIIGPA----ITGPHLITLWLWMMLRVLETVEAHCGYHFPWSLSNFIPLYGG 206
           E L L     IG A    ++G        +     ++TV+ HCG   P +L + +     
Sbjct: 147 EGLLL---DTIGGALSFLLSGMSPRASVFFFSFATIKTVDDHCGLWLPGNLFH-VFFKNN 202

Query: 207 ADFHDYHHRLLYTKSGNYSSTFIYM-DWIFGT 237
             +HD HH+ LY    N+S  F  M D I GT
Sbjct: 203 TAYHDVHHQ-LYGSKYNFSQPFFVMWDKILGT 233


>28644.m000923 sur2 hydroxylase/desaturase, putative
          Length = 257

 Score = 63.9 bits (154), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 5/135 (3%)

Query: 114 YWGHRILH-TKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLG-FATIIGPAITGPHLI 171
           Y+ HR +H  K+LY+HVHS HH+   P+ + + Y HP E L L      I   ++G    
Sbjct: 112 YFVHRYMHQNKFLYRHVHSQHHKLVVPYAIGALYNHPLEGLLLDTVGGAISFLVSGMTAR 171

Query: 172 TLWLWMMLRVLETVEAHCGYHFPWSLSNFIPLYGGADFHDYHHRLLYTKSGNYSSTFIYM 231
           T  ++    V++TV+ HCG   P ++ + I       +HD HH+L  TK  NYS  F  +
Sbjct: 172 TGVIFFCFAVVKTVDDHCGLWLPGNIFH-IFFQNNTAYHDIHHQLQGTKY-NYSQPFFSI 229

Query: 232 -DWIFGTDKGYRKLK 245
            D + GT   Y  +K
Sbjct: 230 WDKLLGTHMPYNLVK 244


>30205.m001612 sterol desaturase, putative
          Length = 276

 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 22/155 (14%)

Query: 102 IIFYFILEDFVFYWGHRILH-TKWLYKHVHSVHHEYATPFGLTSEYA----HPAEILFLG 156
           +I Y ++ +F  YW HR LH  K LYK++H+ HH Y     L S +A    HP + +   
Sbjct: 133 LIAYLVMVEFGIYWMHRELHDIKPLYKYLHATHHIYNKQNTL-SPFAGLAFHPLDGILQA 191

Query: 157 FATIIGPAITGPHLITLWLWMMLRVLETVEAH-CGYHFPWSLSNFIPLYGGADFHDYHHR 215
              +I   I   H  T    + L  + T   H C +   W +        GA +H  HH 
Sbjct: 192 VPHVIALFIVPTHFRTHIGLLFLEAIWTANIHDCIHGKLWPVM-------GAGYHTIHHT 244

Query: 216 LLYTKSGNYSSTFIYMDWIFGT-----DKGYRKLK 245
              T   NY    I+MDW+ GT     +  + K+K
Sbjct: 245 ---TYRHNYGHYTIWMDWMLGTLRDPEEDAFEKVK 276


>29783.m000308 sterol desaturase, putative
          Length = 578

 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 2/99 (2%)

Query: 69  VNLPVMLFSYPVFRYMGMRSDLPLPSWKVVLTQIIFYFILEDFVFYWGHRILHTKWLYKH 128
           V L  ++ S   + +  +  ++PL + K ++  ++ + ++ + V+YW HR  H  +L+ H
Sbjct: 98  VLLQALIGSMACYMFPSLIENVPLWNTKGLIAMLMLHVLISEPVYYWVHRYFHGSYLFPH 157

Query: 129 VHSVHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITG 167
            HS+HH        T  +A   E L L  AT+IG  I G
Sbjct: 158 YHSIHHSSPVLHPFTGAHASFLEHLIL--ATVIGIPIIG 194