Jatropha Genome Database

JcCB0086571.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0086571.10 - phase: 0 
         (386 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29745.m000373 glycerol-3-phosphate dehydrogenase, putative            566   e-162
30570.m000018 glycerol-3-phosphate dehydrogenase, putative             97   2e-20

>29745.m000373 glycerol-3-phosphate dehydrogenase, putative
          Length = 631

 Score =  566 bits (1458), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 284/393 (72%), Positives = 300/393 (76%), Gaps = 17/393 (4%)

Query: 2   SSATRFRRLGVXXXXXXXXXXXGG--FLSPTFATNDHGVRPALDPVKQKITDPNAVVPSR 59
           SSA RFRRLG            GG   LSP  +++D G  PALD V+Q+I D NAVVPSR
Sbjct: 5   SSAIRFRRLGTAAIISAVS---GGAILLSPNISSSDRGGGPALDAVRQRINDFNAVVPSR 61

Query: 60  AAQESVLIGATTANPLDXXXXXXXXXXXXXXXXXXXRGLRVGLVERDDFSSG-------- 111
           AAQES LI A   NPLD                   RGLRVGLVER+DFSSG        
Sbjct: 62  AAQESALIAAGANNPLDVLVIGGGATGSGAALDAVTRGLRVGLVEREDFSSGTSSRSTKL 121

Query: 112 ----VRYLEKAVFNLDYGQLRLVFHALEERKQVIDNAPHLCHALPCMTPCFDWFEVVYYW 167
               VRYLEKAVFNLDYGQL+LVFHALEERKQVIDNAPH+CHALPCMTPCF WFE +YYW
Sbjct: 122 IHGGVRYLEKAVFNLDYGQLKLVFHALEERKQVIDNAPHMCHALPCMTPCFSWFETLYYW 181

Query: 168 MGLKMYDLVAGPRLLHLSRYYSAQESLELFPTLAKKGKDKTLKGTVVYYDGQMNDSRXXX 227
           MGLKMYDLVAGPRLLHLSRYYSA+ESLELFPTLAKKGKD++L GTVVYYDGQMNDSR   
Sbjct: 182 MGLKMYDLVAGPRLLHLSRYYSARESLELFPTLAKKGKDRSLWGTVVYYDGQMNDSRVNV 241

Query: 228 XXXXXXXXXXXXXXXXXEVISFLKDEADERIIGARIRDNLSGKEFETYAKVVVNAAGPFC 287
                            EV+S LKDEA   IIGARIRDNLSGKEF+TYAKVVVNAAGPFC
Sbjct: 242 SLACTAALAGAAVLNHAEVLSLLKDEAHGHIIGARIRDNLSGKEFDTYAKVVVNAAGPFC 301

Query: 288 DSVRKMAKNDAQPMICPSSGVHIILPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGT 347
           DSVRKM   D QPMI PSSGVHI+LPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGT
Sbjct: 302 DSVRKMVNKDVQPMIAPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGT 361

Query: 348 TDSNTIITPLPEPHEDEIQFILDAISDYLSVKV 380
           TDSNT+IT LPEPHEDEIQFILDAISDYLSVKV
Sbjct: 362 TDSNTVITALPEPHEDEIQFILDAISDYLSVKV 394


>30570.m000018 glycerol-3-phosphate dehydrogenase, putative
          Length = 403

 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 117/273 (42%), Gaps = 28/273 (10%)

Query: 96  RGLRVGLVERDDFSSGV-----RYLEKAVFNLDYGQLRLVFHALEERKQVIDNAPHLCHA 150
           RGLR  LVE+ DF+ G      + +   +  L  GQ  L   ++ ER+ ++ +A  L   
Sbjct: 31  RGLRTLLVEQRDFAWGTSSRSSKLVHGGLRYLKQGQFGLTRESVHEREHLLRHAAGLVE- 89

Query: 151 LPCMTPCFDWFEVV----YYWMGLKMYDLVAGPRLLHLSRYYSAQESLELFPTLAKKGKD 206
            P      D+         +  GL +YD +AG R  H   YY   E   L P +A  G  
Sbjct: 90  -PQSFAFGDYAGRKPGKRAFLAGLAIYDRMAGQRNRH---YYDRAEFAALAPNVATNG-- 143

Query: 207 KTLKGTVVYYDGQMNDSRXXXXXXXXXXXXXXXXXXXXEVISFLKDEADERIIGARIRDN 266
             L+G +VY D + +D+R                       + L+ +    + G  +RD 
Sbjct: 144 --LQGGMVYMDAKTDDARLVLRVLREARGHGGVAMNYMAAEALLRGDDAGDVHGVELRDG 201

Query: 267 LSGKEFETYAKVVVNAAGPFCDSVRK-MAKNDAQPMIC---------PSSGVHIILPDYY 316
           LSG   + +A++V++A G + D +R  +A  D               P  G H++LP + 
Sbjct: 202 LSGARHKVHARLVISATGAWADQLRGPLAARDGHTQAAHGAHGARLRPLRGSHLVLPAWR 261

Query: 317 SPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTD 349
            P    + +    DGR VF  PW G T+ GTTD
Sbjct: 262 LPLAQAISLMHPADGRPVFAYPWEGVTLVGTTD 294