Jatropha Genome Database

JcCB0085561.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0085561.10 + phase: 1 /pseudo/partial
         (315 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29693.m001985 (S)-2-hydroxy-acid oxidase, putative                    499   e-142
29727.m000481 (S)-2-hydroxy-acid oxidase, putative                    328   3e-90
29727.m000487 (S)-2-hydroxy-acid oxidase, putative                    327   5e-90
29727.m000486 (S)-2-hydroxy-acid oxidase, putative                    306   8e-84
29727.m000482 (S)-2-hydroxy-acid oxidase, putative                    192   2e-49
29727.m000485 (S)-2-hydroxy-acid oxidase, putative                    112   3e-25

>29693.m001985 (S)-2-hydroxy-acid oxidase, putative
          Length = 369

 Score =  499 bits (1285), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 244/261 (93%), Positives = 251/261 (96%)

Query: 25  FRPRILIDVSKIDMTTSVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLS 84
           FRPRILIDVSKIDMTTSVLGFKISMPIMIAPTAMQKMAHPEGEY         GTIMTLS
Sbjct: 47  FRPRILIDVSKIDMTTSVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLS 106

Query: 85  SWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREA 144
           SWATSSVEEVASTGPGIRFFQLYVY+DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREA
Sbjct: 107 SWATSSVEEVASTGPGIRFFQLYVYRDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREA 166

Query: 145 DIKNRFTLPPFLTLKNFEGLNLGQMDKADDSGLASYVAGQIDRTLSWKDVKWLQTITSLP 204
           DIKNRFTLPPFLTLKNFEGL+LG+MDK+DDSGL+SYVAGQIDRTLSWKD+KWLQTITSLP
Sbjct: 167 DIKNRFTLPPFLTLKNFEGLDLGKMDKSDDSGLSSYVAGQIDRTLSWKDIKWLQTITSLP 226

Query: 205 ILVKGVLTAEDARLAIQNGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRVPVFLDG 264
           ILVKGVLTAED RLAIQNGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRVPVFLDG
Sbjct: 227 ILVKGVLTAEDTRLAIQNGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRVPVFLDG 286

Query: 265 GVRRGTDVFKALALGASGIFV 285
           GVRRGTDVFKALALGASGIF+
Sbjct: 287 GVRRGTDVFKALALGASGIFI 307


>29727.m000481 (S)-2-hydroxy-acid oxidase, putative
          Length = 364

 Score =  328 bits (840), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 162/261 (62%), Positives = 194/261 (74%), Gaps = 3/261 (1%)

Query: 25  FRPRILIDVSKIDMTTSVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLS 84
           FRPRIL+D+S+I M T++LG+ IS PIMIAPTAM K+AHPEGE           T+M LS
Sbjct: 49  FRPRILVDISRIAMPTTILGYTISAPIMIAPTAMHKLAHPEGEIATARAAAASNTVMVLS 108

Query: 85  SWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREA 144
             AT S+EEVA++   +RFFQLYVYK R++ A+LV+RAER G+KAI LT D PRLGRREA
Sbjct: 109 FSATCSLEEVAASCNAVRFFQLYVYKRRDIAAKLVQRAERNGYKAIVLTADCPRLGRREA 168

Query: 145 DIKNRFTLPPFLTLKNFEGLNLGQMDKADDSGLASYVAGQIDRTLSWKDVKWLQTITSLP 204
           DIKN+  +P    LKN EGL   ++     SGL +Y     D +L WKDV WL++IT+LP
Sbjct: 169 DIKNKMFVP---QLKNLEGLLSTEVVSEKGSGLEAYANETFDASLCWKDVGWLKSITNLP 225

Query: 205 ILVKGVLTAEDARLAIQNGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRVPVFLDG 264
           IL+KGVLT EDA  A++ G AGIIVSNHGARQLDY PATI ALEEVV A  G++PV LDG
Sbjct: 226 ILIKGVLTPEDAVKAMEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVGGKIPVLLDG 285

Query: 265 GVRRGTDVFKALALGASGIFV 285
           GVRRGTDVFKALALGA  + V
Sbjct: 286 GVRRGTDVFKALALGAQAVLV 306


>29727.m000487 (S)-2-hydroxy-acid oxidase, putative
          Length = 364

 Score =  327 bits (838), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 159/261 (60%), Positives = 195/261 (74%), Gaps = 3/261 (1%)

Query: 25  FRPRILIDVSKIDMTTSVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLS 84
            RPRIL+DVS+IDM+T++LG+KIS PIMIAPTAM K+A+PEGE           TIM LS
Sbjct: 49  IRPRILVDVSQIDMSTTILGYKISAPIMIAPTAMHKLANPEGEAATARAAAVCNTIMVLS 108

Query: 85  SWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREA 144
             ++ +VEEVAS+   IRF+QLYVYK R++ AQLV+RAER G+KAI LTVD PRLGRREA
Sbjct: 109 YMSSCTVEEVASSCNAIRFYQLYVYKRRDISAQLVQRAERNGYKAIVLTVDAPRLGRREA 168

Query: 145 DIKNRFTLPPFLTLKNFEGLNLGQMDKADDSGLASYVAGQIDRTLSWKDVKWLQTITSLP 204
           DI+N+   P    LKNFEGL   ++   + S L  +     D ++SWKD+ WL++ITSLP
Sbjct: 169 DIRNKMVAP---QLKNFEGLISTEVASNEGSNLEVFAKETFDASMSWKDISWLRSITSLP 225

Query: 205 ILVKGVLTAEDARLAIQNGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRVPVFLDG 264
           IL+KGVLT EDA  A++ G AGI+VSNHGARQLDY PATI  LEEVV A  G++PV  DG
Sbjct: 226 ILIKGVLTHEDAIKAVEVGVAGIVVSNHGARQLDYSPATITVLEEVVHAVGGKIPVLFDG 285

Query: 265 GVRRGTDVFKALALGASGIFV 285
           GV+RGTDVFKALALGA  + V
Sbjct: 286 GVQRGTDVFKALALGAQAVLV 306


>29727.m000486 (S)-2-hydroxy-acid oxidase, putative
          Length = 364

 Score =  306 bits (784), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 151/261 (57%), Positives = 190/261 (72%), Gaps = 3/261 (1%)

Query: 25  FRPRILIDVSKIDMTTSVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLS 84
           FRPRIL+ VS I+M+T++LG+ +S PIMIAPTAM K+AHPEGE           TIM +S
Sbjct: 49  FRPRILVGVSSIEMSTTILGYTVSAPIMIAPTAMHKLAHPEGEVATARAAAASDTIMVVS 108

Query: 85  SWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREA 144
           S A+ S++EVA++   +RFFQLYVYK R++   LV+RAE  G+KAI LT D+PR GRREA
Sbjct: 109 SSASCSLKEVAASCNAVRFFQLYVYKRRDMATILVQRAECNGYKAIILTADSPRFGRREA 168

Query: 145 DIKNRFTLPPFLTLKNFEGLNLGQMDKADDSGLASYVAGQIDRTLSWKDVKWLQTITSLP 204
           DIKN+  +P     KN E     ++   + SG  +Y    ID +L WKD++WL++IT+LP
Sbjct: 169 DIKNKMIVP---QRKNVEVFLPPKVVPENGSGYEAYANQHIDSSLCWKDIEWLKSITNLP 225

Query: 205 ILVKGVLTAEDARLAIQNGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRVPVFLDG 264
           IL+KGVLT EDA  A++ G AGIIVSNHGARQLDY PATI  LEEVV+A   +VPV LDG
Sbjct: 226 ILIKGVLTREDAVKAMEIGVAGIIVSNHGARQLDYTPATISVLEEVVQAVGEKVPVLLDG 285

Query: 265 GVRRGTDVFKALALGASGIFV 285
           G+RRGTDVFKALALGA  + V
Sbjct: 286 GIRRGTDVFKALALGAQAVLV 306


>29727.m000482 (S)-2-hydroxy-acid oxidase, putative
          Length = 300

 Score =  192 bits (488), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 97/162 (59%), Positives = 120/162 (74%), Gaps = 4/162 (2%)

Query: 106 LYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFEGLN 165
           ++VYK R++ A LV+RAE+ G+KAI LTVDTPR GR EADIKN+  +P    LKN EGL 
Sbjct: 87  VFVYKRRDIAATLVQRAEKNGYKAIVLTVDTPRYGRGEADIKNKLIVP---QLKNLEGLL 143

Query: 166 LGQMDKADDSGLASYVAGQIDRTLSWKDVKWLQTITSLPILVKGVLTAEDARLAIQNGAA 225
              +   + SGL ++    +D +  WKDV+WL++IT LPIL+KGVLT EDA  A++ G +
Sbjct: 144 TTAVASENGSGLEAF-NKTLDASFCWKDVEWLKSITDLPILIKGVLTGEDAVKAVEIGVS 202

Query: 226 GIIVSNHGARQLDYVPATIMALEEVVKAAQGRVPVFLDGGVR 267
           GIIVSNHGARQLDY PATI ALEEVV A  GRVPV LDGG+R
Sbjct: 203 GIIVSNHGARQLDYTPATISALEEVVHAIGGRVPVLLDGGIR 244


>29727.m000485 (S)-2-hydroxy-acid oxidase, putative
          Length = 146

 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 53/76 (69%), Positives = 63/76 (82%)

Query: 193 DVKWLQTITSLPILVKGVLTAEDARLAIQNGAAGIIVSNHGARQLDYVPATIMALEEVVK 252
           DV+WL++IT+L IL+KGVLT EDA  A++ G AGIIVSNHGARQLDY PATI ALEEVV 
Sbjct: 2   DVEWLKSITTLSILIKGVLTGEDAVKAVEIGIAGIIVSNHGARQLDYTPATISALEEVVH 61

Query: 253 AAQGRVPVFLDGGVRR 268
           A  G++ V LDGG+RR
Sbjct: 62  AVGGKILVLLDGGIRR 77