Jatropha Genome Database

JcCB0085061.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0085061.30 - phase: 1 /partial
         (161 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29727.m000487 (S)-2-hydroxy-acid oxidase, putative                    177   2e-45
29727.m000481 (S)-2-hydroxy-acid oxidase, putative                    152   5e-38
29727.m000486 (S)-2-hydroxy-acid oxidase, putative                    140   4e-34
29693.m001985 (S)-2-hydroxy-acid oxidase, putative                    119   5e-28
29727.m000482 (S)-2-hydroxy-acid oxidase, putative                     78   2e-15

>29727.m000487 (S)-2-hydroxy-acid oxidase, putative
          Length = 364

 Score =  177 bits (449), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 92/140 (65%), Positives = 103/140 (73%), Gaps = 2/140 (1%)

Query: 12  VYPR-LVEFLHFDIQSTGQKSHCVSIRRIAPTAYHKFANPEGEVXXXXXXXXCNSIMILS 70
           + PR LV+    D+ +T       +   IAPTA HK ANPEGE         CN+IM+LS
Sbjct: 49  IRPRILVDVSQIDMSTTILGYKISAPIMIAPTAMHKLANPEGEAATARAAAVCNTIMVLS 108

Query: 71  YMSSCTVEEVASSCNAIRFYQLYVYKRRDISAHLVQRAERNGYKAIVLTVDAPRLGRREA 130
           YMSSCTVEEVASSCNAIRFYQLYVYKRRDISA LVQRAERNGYKAIVLTVDAPRLGRREA
Sbjct: 109 YMSSCTVEEVASSCNAIRFYQLYVYKRRDISAQLVQRAERNGYKAIVLTVDAPRLGRREA 168

Query: 131 DIKNK-AAPHNWDIQVLVSN 149
           DI+NK  AP   + + L+S 
Sbjct: 169 DIRNKMVAPQLKNFEGLIST 188


>29727.m000481 (S)-2-hydroxy-acid oxidase, putative
          Length = 364

 Score =  152 bits (385), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 71/112 (63%), Positives = 89/112 (79%), Gaps = 1/112 (0%)

Query: 39  IAPTAYHKFANPEGEVXXXXXXXXCNSIMILSYMSSCTVEEVASSCNAIRFYQLYVYKRR 98
           IAPTA HK A+PEGE+         N++M+LS+ ++C++EEVA+SCNA+RF+QLYVYKRR
Sbjct: 77  IAPTAMHKLAHPEGEIATARAAAASNTVMVLSFSATCSLEEVAASCNAVRFFQLYVYKRR 136

Query: 99  DISAHLVQRAERNGYKAIVLTVDAPRLGRREADIKNKA-APHNWDIQVLVSN 149
           DI+A LVQRAERNGYKAIVLT D PRLGRREADIKNK   P   +++ L+S 
Sbjct: 137 DIAAKLVQRAERNGYKAIVLTADCPRLGRREADIKNKMFVPQLKNLEGLLST 188


>29727.m000486 (S)-2-hydroxy-acid oxidase, putative
          Length = 364

 Score =  140 bits (352), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 65/110 (59%), Positives = 85/110 (77%), Gaps = 1/110 (0%)

Query: 39  IAPTAYHKFANPEGEVXXXXXXXXCNSIMILSYMSSCTVEEVASSCNAIRFYQLYVYKRR 98
           IAPTA HK A+PEGEV         ++IM++S  +SC+++EVA+SCNA+RF+QLYVYKRR
Sbjct: 77  IAPTAMHKLAHPEGEVATARAAAASDTIMVVSSSASCSLKEVAASCNAVRFFQLYVYKRR 136

Query: 99  DISAHLVQRAERNGYKAIVLTVDAPRLGRREADIKNKA-APHNWDIQVLV 147
           D++  LVQRAE NGYKAI+LT D+PR GRREADIKNK   P   +++V +
Sbjct: 137 DMATILVQRAECNGYKAIILTADSPRFGRREADIKNKMIVPQRKNVEVFL 186


>29693.m001985 (S)-2-hydroxy-acid oxidase, putative
          Length = 369

 Score =  119 bits (299), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 57/97 (58%), Positives = 70/97 (72%)

Query: 39  IAPTAYHKFANPEGEVXXXXXXXXCNSIMILSYMSSCTVEEVASSCNAIRFYQLYVYKRR 98
           IAPTA  K A+PEGE           +IM LS  ++ +VEEVAS+   IRF+QLYVY+ R
Sbjct: 75  IAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYRDR 134

Query: 99  DISAHLVQRAERNGYKAIVLTVDAPRLGRREADIKNK 135
           ++ A LV+RAER G+KAI LTVD PRLGRREADIKN+
Sbjct: 135 NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNR 171


>29727.m000482 (S)-2-hydroxy-acid oxidase, putative
          Length = 300

 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/44 (81%), Positives = 40/44 (90%)

Query: 92  LYVYKRRDISAHLVQRAERNGYKAIVLTVDAPRLGRREADIKNK 135
           ++VYKRRDI+A LVQRAE+NGYKAIVLTVD PR GR EADIKNK
Sbjct: 87  VFVYKRRDIAATLVQRAEKNGYKAIVLTVDTPRYGRGEADIKNK 130