Jatropha Genome Database

JcCB0084971.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0084971.10 + phase: 0 /pseudo/partial
         (185 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30068.m002559 N6-adenosine-methyltransferase 70 kDa subunit, put...   276   4e-75
30169.m006233 conserved hypothetical protein                           76   7e-15

>30068.m002559 N6-adenosine-methyltransferase 70 kDa subunit,
           putative
          Length = 741

 Score =  276 bits (706), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 134/151 (88%), Positives = 141/151 (93%), Gaps = 1/151 (0%)

Query: 35  GYNRVEEIIWVKTNQLQRIIRTGRTGH*LNHSKEHCLVGILGNPEVNRNIDTDLIVAEVR 94
           GY RVEEIIWVKTNQLQRIIRTGRTGH LNHSKEHCLVGI GNPEVNRNIDTD+IVAEVR
Sbjct: 556 GYKRVEEIIWVKTNQLQRIIRTGRTGHWLNHSKEHCLVGIKGNPEVNRNIDTDVIVAEVR 615

Query: 95  ETSR*PDEMYPVLERISPRTRTLELFARMHNTHAGWMSLGNQLGGVRLVDEGLRARFKAA 154
           ETSR PDEMYP+LERISPRTR LELFARMHNTHAGWMSLGNQL GVRLVD+GLRARFKAA
Sbjct: 616 ETSRKPDEMYPLLERISPRTRKLELFARMHNTHAGWMSLGNQLEGVRLVDDGLRARFKAA 675

Query: 155 YPDVVVQSPSPPWASAMEIDSTASQMRSPFA 185
           YPDV+VQ  SPP ASAME++S ASQMR+PFA
Sbjct: 676 YPDVMVQPSSPPRASAMEVES-ASQMRNPFA 705


>30169.m006233 conserved hypothetical protein
          Length = 1180

 Score = 76.3 bits (186), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 63/113 (55%), Gaps = 10/113 (8%)

Query: 35   GYNRVEEIIWVKTNQLQRIIRTGRTGH*L-NHSKEHCLVGILGNPE-------VNRNIDT 86
            G+ R E+I WVKTN+           H L  HSKEHCL+GI G          ++ NIDT
Sbjct: 915  GFRRCEDICWVKTNKSNATPGLRHDSHTLFQHSKEHCLMGIKGTVRRSTDGHIIHANIDT 974

Query: 87   DLIVAEVRE--TSR*PDEMYPVLERISPRTRTLELFARMHNTHAGWMSLGNQL 137
            D+I+AE     +++ P++MY ++E  S   R LELF   HN  +GW++ G  L
Sbjct: 975  DVIIAEEPPYGSTQKPEDMYRIIEHFSLGRRRLELFGEDHNIRSGWLTAGKGL 1027