Jatropha Genome Database

JcCB0084431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0084431.10 + phase: 0 /partial
         (379 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29929.m004751 conserved hypothetical protein                          254   4e-68
29633.m000897 conserved hypothetical protein                           80   1e-15
29816.m000675 conserved hypothetical protein                           70   2e-12
29736.m002102 conserved hypothetical protein                           64   9e-11

>29929.m004751 conserved hypothetical protein
          Length = 481

 Score =  254 bits (650), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 156/375 (41%), Positives = 197/375 (52%), Gaps = 64/375 (17%)

Query: 1   MSETLAWEKWSTFSHNRYLEEVEQFSKPGSVAQKKAYFEXXXXXXXXXXXXXXXXXXNTA 60
           MSE+LAWEKWSTFSHNRYLEEVEQFSKPGSVAQKKAYFE                  N  
Sbjct: 22  MSESLAWEKWSTFSHNRYLEEVEQFSKPGSVAQKKAYFEAHYKKRAAMKAAASLEQANNV 81

Query: 61  LSSVPEGDIAANNVSEAKTAANNDPEAKTAADNVPEAEITDNNVPEVEIVGRTHKDTPID 120
           +S++PE + A+                               N+ EV+   +T  D+P+D
Sbjct: 82  VSTIPEVETAS-------------------------------NLAEVDAADKTQNDSPMD 110

Query: 121 FVEAEATGNTVIGVQQEKDVHALAQSPESHP------EDRLQNAIVETTEKVIREMIEVG 174
            + AEAT    +  QQEKD   L  S +++       +D  Q AIVE+ E  I+E +E+ 
Sbjct: 111 SISAEATNTAALDKQQEKDSLKLPHSADANSFYTDDGKDSSQIAIVESAEVAIQETVELE 170

Query: 175 SSIQIENPKQLDNAEESDKILATQEAKMPNKVNSSILCLLFMHSAKLSTPCYYHLNQETA 234
           +  Q+EN KQLDNA + DKI+A+ E KM NK                            A
Sbjct: 171 NLTQVENSKQLDNANDFDKIVASAEEKMSNK--------------------------NAA 204

Query: 235 EKENVAVPXXXXXXXXXXXXXXXXXXXKVPKPSIKQVNSTQLKGGTNVNPSKKKSLEELI 294
           E++N A+P                   K+PK S KQ +S QLKG TNV+P+ KKSL ++I
Sbjct: 205 EQKNSALPSNKRQMNLSSKLSNQGRASKLPKSSTKQPSSAQLKGATNVHPNSKKSLGDMI 264

Query: 295 DRKRLNAKPVHMSINLPPXXXXXXXXXXXXXXXXXATPQNSTRASVYGISKLLPSINRQS 354
           DRKRL  K VHMSINL P                  TP+N  RASV+GISKLL SINR S
Sbjct: 265 DRKRLAPKSVHMSINLAPRSGETSKSSARMSKESSTTPKN-PRASVFGISKLLSSINRSS 323

Query: 355 EDRRSQSLLNKSVSG 369
           E++R++S LNKSVSG
Sbjct: 324 EEKRTRSFLNKSVSG 338


>29633.m000897 conserved hypothetical protein
          Length = 543

 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 32/39 (82%), Positives = 38/39 (97%)

Query: 1  MSETLAWEKWSTFSHNRYLEEVEQFSKPGSVAQKKAYFE 39
          MSE+LAWEKWS+FSHNRY+EE E+FS+PGSVAQKKA+FE
Sbjct: 42 MSESLAWEKWSSFSHNRYVEEAERFSRPGSVAQKKAFFE 80


>29816.m000675 conserved hypothetical protein
          Length = 639

 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 29/38 (76%), Positives = 35/38 (92%)

Query: 2  SETLAWEKWSTFSHNRYLEEVEQFSKPGSVAQKKAYFE 39
          SE L+WE+ S+FSHNRYLEEVE++SKPGSV +KKAYFE
Sbjct: 30 SENLSWERRSSFSHNRYLEEVEKYSKPGSVTEKKAYFE 67


>29736.m002102 conserved hypothetical protein
          Length = 556

 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 26/37 (70%), Positives = 33/37 (89%)

Query: 3  ETLAWEKWSTFSHNRYLEEVEQFSKPGSVAQKKAYFE 39
          ++L+WEKWS+FS N+YLEEVE+ + PGSVA KKAYFE
Sbjct: 37 DSLSWEKWSSFSPNKYLEEVEKCATPGSVAMKKAYFE 73