Jatropha Genome Database

JcCB0083791.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0083791.10 + phase: 0 /pseudo/partial
         (341 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29709.m001210 malic enzyme, putative                                  455   e-128
30174.m008988 malic enzyme, putative                                  295   2e-80
29912.m005447 malic enzyme, putative                                  145   3e-35
29794.m003406 malic enzyme, putative                                  143   2e-34
30146.m003510 malic enzyme, putative                                  132   2e-31

>29709.m001210 malic enzyme, putative
          Length = 626

 Score =  455 bits (1170), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 221/255 (86%), Positives = 232/255 (90%)

Query: 84  GVLNAARKTMARMLGNNESAFESARSQFWVVDAQGLITEERPNIDPEALPFARKVKEASR 143
           GVLN ARKTMARMLGNN SAFESARSQFWVVDA+GLITEER N+D E  PFAR++KEA+R
Sbjct: 354 GVLNDARKTMARMLGNNASAFESARSQFWVVDAKGLITEERENLDSEVQPFARRIKEANR 413

Query: 144 QGLREGASLVEVVREVKPDVLLGLSAVGGLFSKEVLEALKGSTSTRPAVFAMSNPTKNAE 203
           QGLREGASLVEVVREVKPDVLLGLSAVGGLFSKEVLEALK STSTRPA+FAMSNPTKNAE
Sbjct: 414 QGLREGASLVEVVREVKPDVLLGLSAVGGLFSKEVLEALKSSTSTRPAIFAMSNPTKNAE 473

Query: 204 CTPEEAFSILGDNIIFASGSPFKDVDLGNGHVGHCNQGNNMYLFPGIGLGTLLSGSRIIS 263
           CT EEAFSI+GDNIIFASGSPFKDVDLGNGHVGHCNQGNNMYLFPGIGLGTLLSGSRIIS
Sbjct: 474 CTAEEAFSIVGDNIIFASGSPFKDVDLGNGHVGHCNQGNNMYLFPGIGLGTLLSGSRIIS 533

Query: 264 DGMLQAAAECLAAYMTEEEVLQGVIYPSTSRIRDITKQXXXXXXXXXXXXDLAEGYREMD 323
           DGMLQAAAECLAAYMTEEEVLQG+I+PSTSRIRDITKQ            DLAEGYREMD
Sbjct: 534 DGMLQAAAECLAAYMTEEEVLQGIIFPSTSRIRDITKQVAAAVVKEAIEEDLAEGYREMD 593

Query: 324 ARELRKLNEVHILSF 338
           ARE+RKLNE  IL +
Sbjct: 594 AREVRKLNEEEILEY 608


>30174.m008988 malic enzyme, putative
          Length = 602

 Score =  295 bits (756), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 143/255 (56%), Positives = 192/255 (75%), Gaps = 5/255 (1%)

Query: 84  GVLNAARKTMARMLGNNESAFESARSQFWVVDAQGLITEERPNIDPEALPFARKVKEASR 143
           GVLN A + ++RM GNNE+   S  + F+++D  GLIT+ER NIDP A PFA+ +K+   
Sbjct: 336 GVLNMAIQAVSRMSGNNEA---SVNNNFFLLDKDGLITKERKNIDPAAAPFAKDLKDV-- 390

Query: 144 QGLREGASLVEVVREVKPDVLLGLSAVGGLFSKEVLEALKGSTSTRPAVFAMSNPTKNAE 203
           +GLREGA+LVEVV+++KP VLLGLS VGG+F+ EVL+A++ S   +PA+FAMSNPT NAE
Sbjct: 391 EGLREGATLVEVVKKLKPHVLLGLSGVGGIFNDEVLKAMRDSDCIKPAIFAMSNPTMNAE 450

Query: 204 CTPEEAFSILGDNIIFASGSPFKDVDLGNGHVGHCNQGNNMYLFPGIGLGTLLSGSRIIS 263
           CT  +AF   G+NI+FASGSPF++VDLGNG VGH NQ NNMYLFPGIGLG L+SG+R I+
Sbjct: 451 CTATDAFKHAGENIVFASGSPFENVDLGNGKVGHVNQANNMYLFPGIGLGALVSGARFIT 510

Query: 264 DGMLQAAAECLAAYMTEEEVLQGVIYPSTSRIRDITKQXXXXXXXXXXXXDLAEGYREMD 323
           DGMLQAAAECLA+YMT+EE+ +G++YPS + IR IT +             LAEG+ ++ 
Sbjct: 511 DGMLQAAAECLASYMTDEEIQKGILYPSINSIRHITAEVGAAVLRAAVAEHLAEGHGDVG 570

Query: 324 ARELRKLNEVHILSF 338
            REL+ +++   + +
Sbjct: 571 PRELKHMSKEETVEY 585


>29912.m005447 malic enzyme, putative
          Length = 591

 Score =  145 bits (365), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 81/205 (39%), Positives = 120/205 (58%), Gaps = 11/205 (5%)

Query: 96  MLGNNESAFESARSQFWVVDAQGLITEERPN-IDPEALPFARKVKEASRQGLREGASLVE 154
           M     +  E  R + W+VD++GLI   R + +     P+A + +           +L++
Sbjct: 354 MSKRTNAPLEETRKKIWLVDSKGLIVSSRKDSLQHFKQPWAHEHEPVK--------NLLD 405

Query: 155 VVREVKPDVLLGLSAVGGLFSKEVLEALKGSTSTRPAVFAMSNPTKNAECTPEEAFSILG 214
            V+ +KP VL+G S VG  F+KEV+EA+  S + +P + ++SNPT  +ECT EEA++   
Sbjct: 406 AVKAIKPTVLIGSSGVGRTFTKEVIEAM-ASLNEKPLILSLSNPTSQSECTAEEAYTWTK 464

Query: 215 DNIIFASGSPFKDVDLGNGHVGHCNQGNNMYLFPGIGLGTLLSGSRIISDGMLQAAAECL 274
               FASGSPF  V+   G V    Q NN Y+FPG GLG ++SG+  + D ML AA+E L
Sbjct: 465 GKATFASGSPFDPVEY-EGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEAL 523

Query: 275 AAYMTEEEVLQGVIYPSTSRIRDIT 299
           A+ +TEE   +G+IYP  S IR I+
Sbjct: 524 ASQVTEENFSKGLIYPPFSNIRKIS 548


>29794.m003406 malic enzyme, putative
          Length = 588

 Score =  143 bits (360), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 120/200 (60%), Gaps = 9/200 (4%)

Query: 100 NESAFESARSQFWVVDAQGLITEERPNIDPEALPFARKVKEASRQGLREGASLVEVVREV 159
            ++  E  R + W+VD++GLI   R     E+L   +K      + ++    L++ V+ +
Sbjct: 355 TKAPIEETRKKIWLVDSKGLIVSSRK----ESLQHFKKPWAHEHEPVK---GLLDAVKAL 407

Query: 160 KPDVLLGLSAVGGLFSKEVLEALKGSTSTRPAVFAMSNPTKNAECTPEEAFSILGDNIIF 219
           KP VL+G S VG  F+KEV++A+  S + +P + A+SNPT  +ECT EEA++      I+
Sbjct: 408 KPTVLIGSSGVGKTFTKEVVQAM-ASFNEKPLILALSNPTSQSECTAEEAYTWSEGRAIY 466

Query: 220 ASGSPFKDVDLGNGHVGHCNQGNNMYLFPGIGLGTLLSGSRIISDGMLQAAAECLAAYMT 279
           ASGSPF  V+  NG V    Q NN Y+FPG GLG ++SG+  + + ML AA+E LA  + 
Sbjct: 467 ASGSPFDPVEY-NGKVFVSGQANNAYIFPGFGLGLIMSGAIRVHEDMLLAASEALAEQVK 525

Query: 280 EEEVLQGVIYPSTSRIRDIT 299
           +E   +G+IYP  S IR I+
Sbjct: 526 QEHFDKGLIYPPFSNIRKIS 545


>30146.m003510 malic enzyme, putative
          Length = 641

 Score =  132 bits (332), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/195 (41%), Positives = 120/195 (61%), Gaps = 9/195 (4%)

Query: 105 ESARSQFWVVDAQGLITEERPNIDPEALPFARKVKEASRQGLREGASLVEVVREVKPDVL 164
           E  R + W+VD++GLI   R     ++L   ++      + ++   +L++ V ++KP VL
Sbjct: 413 EETRKKIWLVDSKGLIVSSRM----DSLQHFKRPWAHEHEPIK---TLLDAVNDIKPTVL 465

Query: 165 LGLSAVGGLFSKEVLEALKGSTSTRPAVFAMSNPTKNAECTPEEAFSILGDNIIFASGSP 224
           +G S VG  F+KEV+EA+  S + +P + A+SNPT  +ECT EEA++      IFASGSP
Sbjct: 466 IGTSGVGRTFTKEVVEAM-ASFNEKPIILALSNPTSQSECTAEEAYTWSQGRAIFASGSP 524

Query: 225 FKDVDLGNGHVGHCNQGNNMYLFPGIGLGTLLSGSRIISDGMLQAAAECLAAYMTEEEVL 284
           F  V+   G V    Q NN Y+FPG GLG ++SG+  + D ML AA+E LAA +T+E   
Sbjct: 525 FAPVEY-EGKVYVPGQANNAYIFPGFGLGLIMSGTIRVHDDMLLAASEALAAQVTQENFD 583

Query: 285 QGVIYPSTSRIRDIT 299
           +G+IYP  + IR I+
Sbjct: 584 KGLIYPPFTNIRKIS 598