Jatropha Genome Database

JcCB0083701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0083701.10 + phase: 2 /partial
         (181 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29980.m000174 40S ribosomal protein S7, putative                      308   6e-85
29996.m000136 40S ribosomal protein S7, putative                      301   1e-82

>29980.m000174 40S ribosomal protein S7, putative
          Length = 191

 Score =  308 bits (790), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 151/164 (92%), Positives = 158/164 (96%)

Query: 18  FDLENTNPELKSDLKDLFINQAVQMDVSGNRKAVVIYVPYRLRKAYRKIHLRLVRELEKK 77
           FDLENT+ +LKSDLKDLFIN AVQMDV+GNRKAVVIYVPYRLRKAYRKIHLRLVRELEKK
Sbjct: 28  FDLENTSQDLKSDLKDLFINSAVQMDVAGNRKAVVIYVPYRLRKAYRKIHLRLVRELEKK 87

Query: 78  FSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTSVHDAMLEDVVYPAEIVGKRIRYRIDG 137
           FSGKDVVL+ATRRIVRPPKKGSAVQRPR+RTLT+VHDAMLEDVVYPAEIVGKR RYRIDG
Sbjct: 88  FSGKDVVLVATRRIVRPPKKGSAVQRPRTRTLTAVHDAMLEDVVYPAEIVGKRTRYRIDG 147

Query: 138 SKIIKIFLDPKERNNTEYKLETFAGVYRKLTGKDVVFEYPITEA 181
           SK +KIFLDPKER NTEYKLETF GVYRKLTGKDVVFEYPITEA
Sbjct: 148 SKTMKIFLDPKERINTEYKLETFTGVYRKLTGKDVVFEYPITEA 191


>29996.m000136 40S ribosomal protein S7, putative
          Length = 191

 Score =  301 bits (771), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 142/164 (86%), Positives = 159/164 (96%)

Query: 18  FDLENTNPELKSDLKDLFINQAVQMDVSGNRKAVVIYVPYRLRKAYRKIHLRLVRELEKK 77
           FDLENTN ELKSD+KDL+IN AVQ+DV+GNRKAVVI+VPYRLRKAYRKIH+RLVRELEKK
Sbjct: 28  FDLENTNSELKSDMKDLYINSAVQIDVAGNRKAVVIHVPYRLRKAYRKIHVRLVRELEKK 87

Query: 78  FSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTSVHDAMLEDVVYPAEIVGKRIRYRIDG 137
           FSGKDV+LIATRRIVRPPKKGSAVQRPR+RTLT+VH+AMLED+V PAEIVGKR RYRIDG
Sbjct: 88  FSGKDVILIATRRIVRPPKKGSAVQRPRTRTLTAVHEAMLEDIVLPAEIVGKRTRYRIDG 147

Query: 138 SKIIKIFLDPKERNNTEYKLETFAGVYRKLTGKDVVFEYPITEA 181
           SKI+K+FLDPKERNNTEYKLETF+ VYRKL+GKDVVFE+P+TEA
Sbjct: 148 SKIMKVFLDPKERNNTEYKLETFSAVYRKLSGKDVVFEFPVTEA 191