Jatropha Genome Database

JcCB0082981.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0082981.10 - phase: 0 /pseudo/partial
         (974 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m009084 conserved hypothetical protein                          468   e-132

>30174.m009084 conserved hypothetical protein
          Length = 1246

 Score =  468 bits (1205), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 243/404 (60%), Positives = 294/404 (72%), Gaps = 17/404 (4%)

Query: 574 GTSDASAGALGSSVHLLRKDTVTNTGASGIGNISISQ-PKKVYTRKKVPNTDPMVRKHSP 632
           G S AS  ALGSS+ L R +T+   GAS I NIS SQ P+KVYTR+KV N +P  RKH+P
Sbjct: 546 GASAASVEALGSSLQLSRTNTLVKDGASEISNISSSQVPEKVYTRRKVLNAEPTARKHNP 605

Query: 633 SLLESVGCGKFVDGYIPETTGALLQSEPSYTSFSVDRLHKKELLSADTRVGEQFHDLHTD 692
            LL+S+GC +  D  I ETTG LL SEP    F+     K E+   D RVG   H L TD
Sbjct: 606 PLLKSLGCRRLSDACILETTGTLLDSEP----FN----DKNEVFYEDARVGRNLHVLPTD 657

Query: 693 KTTITSNPVFDSHAHLISQTQKSDCPSEGQNTSNLFVRS---TEKPKPHFKVGLVGDETT 749
           KT + SNP  +S  H+ S TQ + C  EG +TSN+ V S    EKP  HF+  LVG + T
Sbjct: 658 KTAVNSNPALESPVHITSVTQANICALEGHDTSNIVVPSMSDVEKPL-HFEERLVGLKNT 716

Query: 750 SDANNPGSEKQGTLFCHNKTLISKEVQGSSELKKQRNLELNNELEDAVEFLGCYFHPMPV 809
            D N  GS+++G  F  +KT  S   +G+SE+ +Q N EL NEL+  VEFLGCYFHPMPV
Sbjct: 717 LDINGLGSQEEGKGF--DKT--SSAQEGNSEIMRQWNSELTNELDGIVEFLGCYFHPMPV 772

Query: 810 LLLLLSRKGNEIYICAVCGLPVDKNRTLFLYKLAVEEPKIGCPYFVGHTSVAWPSSTDIF 869
           L LL+ RKGNEIYIC +CGL V+K+RTLFLYKLA+E P+IGCP F+GHTSV WPSST IF
Sbjct: 773 LSLLVRRKGNEIYICVLCGLLVEKDRTLFLYKLAIEGPRIGCPCFIGHTSVTWPSSTGIF 832

Query: 870 GREIAFERSGLQLTPDGKCLVLLGNTRTPYCREGRIDCLCSTCTTDCNENSTVKIVQVQD 929
           GREI+FERSGLQLTPDG+CLVLLG+TR P CREGR++CLCS C +DC  ++ VKIVQV+ 
Sbjct: 833 GREISFERSGLQLTPDGQCLVLLGSTRAPCCREGRLECLCSACASDCFGSNGVKIVQVKA 892

Query: 930 GYVSVLLKLRTTDSLQCILVCEPDHIIAAGESRGLNLWTMNSTW 973
           GYVSVL+KL+T DSLQCILVCEPDH++AAGE+  L+LWTMNS W
Sbjct: 893 GYVSVLVKLKTNDSLQCILVCEPDHLVAAGENSRLHLWTMNSVW 936



 Score =  350 bits (898), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 188/290 (64%), Positives = 212/290 (73%), Gaps = 11/290 (3%)

Query: 1   KKEMYLQRGKDRYPYPVGYQARRAYNGGTYKMEIQEGHKGPLFVITSADGHLCSGQTADI 60
           KK     RGKDRYPYPVGYQARRAY+G TYKMEIQEG KGPLF+ITSA GH CSGQT DI
Sbjct: 32  KKYWSSSRGKDRYPYPVGYQARRAYHGSTYKMEIQEGPKGPLFLITSAGGHSCSGQTPDI 91

Query: 61  AWDKFQKKGCPRMKIWHGKRFLCKIDGIEFFGFRNPFVQRLLRELVANVNGVAEHSLLPS 120
           AW+KFQKKGC RMKIWHGKR+ CKIDGIEFFGFRNP VQRLLRELVANVNG+AE SLL S
Sbjct: 92  AWEKFQKKGCSRMKIWHGKRYSCKIDGIEFFGFRNPLVQRLLRELVANVNGIAEQSLLAS 151

Query: 121 GTCNGASNMEHNNQCQDSHTCSDLLPYLSRPQVTGKRSKRFKIIDPKSLGIDGLKRLRAG 180
             CNGASN+E +NQ QD  T SDLL +L+R  VTGKRSKR ++I+PK   IDGLKRL AG
Sbjct: 152 IFCNGASNIEPSNQYQDPSTSSDLLSHLARSHVTGKRSKRCELINPKPSRIDGLKRLCAG 211

Query: 181 NLKCIVEPSNSINGNPKQGSSSSPSTCSFHLKDDSCRLLGASSTGVQSDYATGGENSH-L 239
                    +S +G+ KQ +S   ST SF+   DSC LLGA   G+Q + ATG EN+   
Sbjct: 212 ---------DSSHGSHKQRTSLPSSTFSFNEMHDSCMLLGAVPAGLQLNSATGKENAQSS 262

Query: 240 AKDGLSSKSVDYSDHLGEKTVPVYEESKLASSEDNKS-TVVQKFSAEENP 288
           AKD L  + V Y +HL EK V  YEESKLA SE+N+S T V     EE P
Sbjct: 263 AKDDLLLEFVHYPNHLMEKAVSSYEESKLAGSENNESNTAVSNSCLEEKP 312



 Score =  115 bits (287), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/127 (55%), Positives = 91/127 (71%), Gaps = 1/127 (0%)

Query: 322 KEEIMATEVADSEELANKP-YPKEEMGTSSSHLSSERSDFDSVGQDIAKSMMTVLLPQAI 380
           KE +M T++  SE L N     +EE G S+S++ SE+SDFDSVGQDIAKSMMTVLLPQA+
Sbjct: 417 KEVLMVTDLVVSEHLVNTSCLEEEEAGISNSNVGSEKSDFDSVGQDIAKSMMTVLLPQAV 476

Query: 381 PLLKKTSSKKKRIVSPPENLPSIPALHEENNETGFFVEAQFAGVDHSVLKSSEFTKSNVL 440
           PLLKKTS KKK+ ++  +N PS    +EE+N TG F++AQ   VDHSV++S   T S +L
Sbjct: 477 PLLKKTSRKKKKTINSSKNFPSTCKPYEESNGTGSFMKAQSPNVDHSVVRSCGHTNSIIL 536

Query: 441 DTLDDEQ 447
           D  D +Q
Sbjct: 537 DKFDGDQ 543