Jatropha Genome Database

JcCB0079621.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0079621.20 - phase: 0 /pseudo/partial
         (207 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29682.m000578 auxin:hydrogen symporter, putative                      194   3e-50
29682.m000579 auxin:hydrogen symporter, putative                      171   3e-43
29709.m001218 auxin:hydrogen symporter, putative                      166   9e-42
29682.m000577 auxin:hydrogen symporter, putative                      159   7e-40
29830.m001469 auxin:hydrogen symporter, putative                      143   6e-35
29932.m000591 auxin:hydrogen symporter, putative                       82   2e-16
27955.m000384 auxin:hydrogen symporter, putative                       74   5e-14
28748.m000208 auxin:hydrogen symporter, putative                       69   2e-12

>29682.m000578 auxin:hydrogen symporter, putative
          Length = 417

 Score =  194 bits (493), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 93/153 (60%), Positives = 116/153 (75%)

Query: 54  IVGFVIGLVPYIRKLLIGVEAPLHVIRDTTSLLGEAAIPXXXXXXXXXXXXXXXXXXXXK 113
           IVGF++G VP IRKLLIG  APLHVI D+ SL+G+AAIP                     
Sbjct: 264 IVGFIVGAVPQIRKLLIGTNAPLHVIEDSASLVGDAAIPAVTLIVGGNLLRGLKGSGIQL 323

Query: 114 SVLFGIIVARYIALPLIGIVIVKGALRFGFIPSDPLYQFVLLLQFAVPPAMNIGVITQLF 173
           S++FGI+  RY+ LPL+GIVIV+GA+ FG + SDPLYQF+LL+QFAVPPAMNIG +TQLF
Sbjct: 324 SLVFGILGVRYVILPLLGIVIVRGAVHFGLVGSDPLYQFILLVQFAVPPAMNIGTMTQLF 383

Query: 174 GAGETECSVIMFWAYALASVSLTLWSTIFMWLV 206
           G G++ECSVIM W YA+AS+SLTLWST+F+W+V
Sbjct: 384 GTGQSECSVIMLWTYAMASISLTLWSTLFLWMV 416


>29682.m000579 auxin:hydrogen symporter, putative
          Length = 447

 Score =  171 bits (432), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 92/183 (50%), Positives = 112/183 (61%), Gaps = 29/183 (15%)

Query: 54  IVGFVIGLVPYIRKLLIGVEAPLHVIRDTTSLLGEAAIPXXXXXXXXXXXXXXXXXXXXK 113
           ++GF+IG  P +R+ LIG  APLHVI D+ SLLG+AAIP                     
Sbjct: 265 VIGFIIGTTPQLREALIGDNAPLHVIPDSASLLGDAAIPSITLGVGANLLTGLKGSAVQL 324

Query: 114 SVLFGIIVARYIALPLIGIVIVKGALRFGFIPSDPLYQFVLLLQFAVPPAMNI------- 166
            V+ GI+V RYI LP+ G+VIVK A+  G + SDPLYQFVLLLQFA+PPAMNI       
Sbjct: 325 PVIVGIMVVRYIILPICGVVIVKSAVHLGLVQSDPLYQFVLLLQFALPPAMNIGLSDKLK 384

Query: 167 ----------------------GVITQLFGAGETECSVIMFWAYALASVSLTLWSTIFMW 204
                                 G++TQLFGAGE+ECSVI+ W+YA+ASVSLTLWST FMW
Sbjct: 385 CLGQVEHELVIDVLVRPHNARAGMMTQLFGAGESECSVILLWSYAVASVSLTLWSTFFMW 444

Query: 205 LVA 207
           LV 
Sbjct: 445 LVG 447


>29709.m001218 auxin:hydrogen symporter, putative
          Length = 434

 Score =  166 bits (419), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 84/154 (54%), Positives = 101/154 (65%)

Query: 54  IVGFVIGLVPYIRKLLIGVEAPLHVIRDTTSLLGEAAIPXXXXXXXXXXXXXXXXXXXXK 113
           + GF IG++  IRK++IG  APL VI  + +LLGEAAIP                     
Sbjct: 281 MAGFAIGIISPIRKIMIGDSAPLRVIYSSANLLGEAAIPSITLIVGANLLRGLKRSGASI 340

Query: 114 SVLFGIIVARYIALPLIGIVIVKGALRFGFIPSDPLYQFVLLLQFAVPPAMNIGVITQLF 173
           S + GII  R++ LP IGI +VK A  FG + SDPLYQF L+LQFAVPPAMNIG I QL 
Sbjct: 341 SAMIGIIGVRFVVLPPIGIGVVKAAHHFGIVESDPLYQFTLMLQFAVPPAMNIGTIAQLV 400

Query: 174 GAGETECSVIMFWAYALASVSLTLWSTIFMWLVA 207
             GE+ECSVIM W YA+ASVS+TLWS  FMWLV+
Sbjct: 401 NTGESECSVIMLWTYAVASVSVTLWSAFFMWLVS 434


>29682.m000577 auxin:hydrogen symporter, putative
          Length = 390

 Score =  159 bits (403), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 79/153 (51%), Positives = 103/153 (67%)

Query: 54  IVGFVIGLVPYIRKLLIGVEAPLHVIRDTTSLLGEAAIPXXXXXXXXXXXXXXXXXXXXK 113
           I+GF IG V  IRKL+IG  APL V+  + +LLG+A IP                     
Sbjct: 237 IIGFTIGSVSAIRKLIIGTSAPLRVLDSSAALLGDATIPSMTLIVGANLLKGLKRSGVSM 296

Query: 114 SVLFGIIVARYIALPLIGIVIVKGALRFGFIPSDPLYQFVLLLQFAVPPAMNIGVITQLF 173
            V+ GII+ RY+ +P++GI +VK A  FG + SD LYQFVLLLQ+A+PPAM +G+I QLF
Sbjct: 297 WVIVGIIMVRYVLMPVMGIGVVKAAYHFGMVGSDSLYQFVLLLQYALPPAMTVGIIAQLF 356

Query: 174 GAGETECSVIMFWAYALASVSLTLWSTIFMWLV 206
            AGE+ECSVIM W+YA+A  +LTLWST +MWL+
Sbjct: 357 QAGESECSVIMLWSYAVAGFALTLWSTFYMWLL 389


>29830.m001469 auxin:hydrogen symporter, putative
          Length = 406

 Score =  143 bits (360), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 98/154 (63%)

Query: 54  IVGFVIGLVPYIRKLLIGVEAPLHVIRDTTSLLGEAAIPXXXXXXXXXXXXXXXXXXXXK 113
           I GF+ G   ++R L+IG  APL VI+D+  LLG+  IP                     
Sbjct: 253 IFGFLFGATTFLRNLIIGSSAPLRVIQDSIKLLGDGTIPCITLILGGNLIQGLRSSRIKP 312

Query: 114 SVLFGIIVARYIALPLIGIVIVKGALRFGFIPSDPLYQFVLLLQFAVPPAMNIGVITQLF 173
            ++ G++  R++ LP IGI +VK A   GF+PSDPLY FVL++Q+ +PPAMNIG +TQLF
Sbjct: 313 WIIVGVLFVRFMMLPAIGIWLVKAAGSLGFLPSDPLYHFVLMVQYTLPPAMNIGTMTQLF 372

Query: 174 GAGETECSVIMFWAYALASVSLTLWSTIFMWLVA 207
             G+ ECSV+  W Y +A+++LT WSTI+MW+++
Sbjct: 373 DVGQEECSVLFLWTYLVAALALTFWSTIYMWILS 406


>29932.m000591 auxin:hydrogen symporter, putative
          Length = 451

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 1/156 (0%)

Query: 53  QIVGFVIGLVPYIRKLLIGVEAPLHVIRDTTSLLGEAAIPXXXXXXXXXXXXXXXXXXXX 112
            ++  VIG+VP ++  + G +APL  I D+  +L  A +P                    
Sbjct: 294 SLLAIVIGMVPQLKAFVFGYDAPLSFITDSLEILAGAMVPSVMLMLGGMLAEGPKESTLG 353

Query: 113 KSVLFGIIVARYIALPLIGIVIVKGALRFGF-IPSDPLYQFVLLLQFAVPPAMNIGVITQ 171
                GI VAR + LPL+GI +V  A +  F +  D +Y+FVLLLQ+  P A+ +G I  
Sbjct: 354 LRTTIGISVARLLVLPLLGIGVVAVADKLNFLVIGDAMYRFVLLLQYTTPSAILLGAIAS 413

Query: 172 LFGAGETECSVIMFWAYALASVSLTLWSTIFMWLVA 207
           L G    E S ++FW +  A  SL+L+  I+  L++
Sbjct: 414 LRGYAVKEASALLFWQHVFALFSLSLYIVIYFRLLS 449


>27955.m000384 auxin:hydrogen symporter, putative
          Length = 416

 Score = 73.9 bits (180), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 78/152 (51%), Gaps = 2/152 (1%)

Query: 53  QIVGFVIGLVPYIRKLLIGVEAPLHVIRDTTSLLGEAAIPXXXXXXXXXXXXXXXXXXXX 112
            I+   +G VP+ ++L+   +APL+   D+ ++LGEA IP                    
Sbjct: 262 SILAMFLGAVPFFKRLIFTTDAPLYFFTDSCNILGEAMIPCILLALGGNLVDGPGTSKLG 321

Query: 113 KSVLFGIIVARYIALPLIGIVIVKGALRFGFIPS-DPLYQFVLLLQFAVPPAMNIGVITQ 171
                 II AR + +P  G+ IV  A + GF+P+ D +++FVLLLQ ++P ++  G +  
Sbjct: 322 LRTTAAIIFARLLLVPPAGLGIVMLADKLGFLPAGDKMFRFVLLLQHSMPTSVLAGAVAN 381

Query: 172 LFGAGETECSVIMFWAYALASVSLTLWSTIFM 203
           L G G  E + ++FW +  A  S+  W  +++
Sbjct: 382 LRGCGR-EAAAVLFWVHIFAVFSMAGWIVLYL 412


>28748.m000208 auxin:hydrogen symporter, putative
          Length = 421

 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 1/123 (0%)

Query: 53  QIVGFVIGLVPYIRKLLIGVEAPLHVIRDTTSLLGEAAIPXXXXXXXXXXXXXXXXXXXX 112
            ++  +IG++P ++K++ G EAPL  + D+  +L EA +P                    
Sbjct: 296 SLLAIIIGVIPAVKKIVYGTEAPLEFMTDSLDILSEAMVPSVMLILGGLLAEGPTNSKLG 355

Query: 113 KSVLFGIIVARYIALPLIGIVIVKGALRFG-FIPSDPLYQFVLLLQFAVPPAMNIGVITQ 171
                G+IVAR + LP IGI ++  A R+   I  D +Y+FVLLLQ+  P A+ +G +  
Sbjct: 356 TRTTIGVIVARLLVLPAIGIGVIYLADRWNLLISGDLMYRFVLLLQYTTPSAILLGAVAS 415

Query: 172 LFG 174
           L G
Sbjct: 416 LRG 418